Query 010140
Match_columns 517
No_of_seqs 560 out of 2865
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 21:30:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010140.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010140hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0610 Putative serine/threon 100.0 6.1E-68 1.3E-72 505.8 29.1 369 56-486 48-417 (459)
2 KOG0605 NDR and related serine 100.0 2.8E-65 6E-70 502.6 26.7 349 73-502 130-483 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 1.3E-64 2.8E-69 479.2 24.2 282 81-483 22-305 (357)
4 KOG0616 cAMP-dependent protein 100.0 8.4E-63 1.8E-67 451.4 23.6 276 81-481 41-319 (355)
5 KOG0592 3-phosphoinositide-dep 100.0 1.8E-62 4E-67 482.2 24.8 288 80-480 69-357 (604)
6 KOG0694 Serine/threonine prote 100.0 1.1E-59 2.4E-64 475.1 25.5 282 79-483 363-648 (694)
7 KOG0615 Serine/threonine prote 100.0 1.1E-60 2.3E-65 455.5 15.0 277 82-481 170-461 (475)
8 KOG0575 Polo-like serine/threo 100.0 2.5E-58 5.4E-63 460.4 21.9 256 84-465 18-273 (592)
9 KOG0581 Mitogen-activated prot 100.0 2.3E-56 4.9E-61 423.2 21.5 260 81-468 76-342 (364)
10 KOG0595 Serine/threonine-prote 100.0 5E-56 1.1E-60 424.2 20.7 261 82-467 8-274 (429)
11 KOG0593 Predicted protein kina 100.0 3.7E-55 8.1E-60 401.9 11.5 279 84-480 2-303 (396)
12 KOG0690 Serine/threonine prote 100.0 8.1E-55 1.8E-59 402.7 12.9 282 79-482 163-447 (516)
13 KOG0580 Serine/threonine prote 100.0 4.5E-54 9.8E-59 383.2 14.6 262 79-466 17-278 (281)
14 KOG0612 Rho-associated, coiled 100.0 4E-54 8.6E-59 453.1 16.0 286 77-483 68-360 (1317)
15 KOG0588 Serine/threonine prote 100.0 1E-53 2.2E-58 428.7 17.0 263 83-472 11-274 (786)
16 KOG0585 Ca2+/calmodulin-depend 100.0 2.9E-53 6.2E-58 410.7 17.6 272 76-466 89-377 (576)
17 KOG0583 Serine/threonine prote 100.0 1.5E-52 3.1E-57 420.5 23.1 262 81-467 14-281 (370)
18 KOG0661 MAPK related serine/th 100.0 1.7E-53 3.7E-58 412.8 15.6 266 82-467 8-297 (538)
19 KOG0597 Serine-threonine prote 100.0 2.2E-53 4.9E-58 418.2 12.8 256 83-466 1-256 (808)
20 KOG0033 Ca2+/calmodulin-depend 100.0 7.1E-54 1.5E-58 382.4 7.9 263 82-468 9-274 (355)
21 KOG0591 NIMA (never in mitosis 100.0 2.1E-53 4.6E-58 386.7 9.2 255 81-452 16-276 (375)
22 PTZ00263 protein kinase A cata 100.0 6.9E-51 1.5E-55 408.3 27.2 268 80-472 14-282 (329)
23 PTZ00426 cAMP-dependent protei 100.0 6.4E-51 1.4E-55 409.8 26.7 281 79-483 25-308 (340)
24 cd05612 STKc_PRKX_like Catalyt 100.0 3.8E-51 8.3E-56 403.2 23.7 265 84-473 1-266 (291)
25 KOG0582 Ste20-like serine/thre 100.0 9.1E-51 2E-55 391.0 23.5 277 79-468 21-300 (516)
26 cd05631 STKc_GRK4 Catalytic do 100.0 1.3E-50 2.8E-55 398.2 24.8 277 85-482 1-284 (285)
27 KOG0663 Protein kinase PITSLRE 100.0 1.2E-51 2.5E-56 383.7 16.2 287 79-483 71-383 (419)
28 KOG0600 Cdc2-related protein k 100.0 8.6E-52 1.9E-56 403.8 16.0 283 81-480 114-419 (560)
29 KOG0608 Warts/lats-like serine 100.0 5.5E-51 1.2E-55 405.3 20.6 307 80-483 625-950 (1034)
30 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-50 7.9E-55 408.6 26.8 306 84-476 1-308 (363)
31 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-50 6.2E-55 409.8 26.0 317 84-482 1-317 (364)
32 KOG0659 Cdk activating kinase 100.0 4.6E-51 1E-55 369.0 17.3 266 84-467 2-287 (318)
33 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-50 5.2E-55 403.4 23.7 270 90-481 1-273 (323)
34 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-50 6.7E-55 411.3 24.1 321 84-482 1-326 (377)
35 KOG0986 G protein-coupled rece 100.0 6.6E-51 1.4E-55 391.8 17.7 284 80-484 181-471 (591)
36 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.3E-50 1.2E-54 402.7 24.8 276 84-482 1-278 (333)
37 KOG0696 Serine/threonine prote 100.0 2E-51 4.4E-56 390.7 13.2 282 80-483 345-630 (683)
38 KOG0611 Predicted serine/threo 100.0 3.8E-51 8.2E-56 388.0 14.1 257 84-471 53-310 (668)
39 cd05589 STKc_PKN Catalytic dom 100.0 2.7E-49 5.9E-54 396.0 27.7 274 86-482 1-280 (324)
40 cd05590 STKc_nPKC_eta Catalyti 100.0 1.8E-49 3.9E-54 396.5 26.2 272 90-483 1-277 (320)
41 cd05625 STKc_LATS1 Catalytic d 100.0 2.1E-49 4.6E-54 405.9 26.8 323 85-482 2-327 (382)
42 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-49 6.5E-54 395.6 27.2 276 85-482 1-280 (323)
43 cd05587 STKc_cPKC Catalytic do 100.0 2E-49 4.4E-54 397.0 25.7 276 85-482 1-280 (324)
44 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-49 3.2E-54 395.8 24.5 267 92-481 1-269 (312)
45 cd05598 STKc_LATS Catalytic do 100.0 1.4E-49 3E-54 406.5 23.6 322 84-482 1-323 (376)
46 KOG0198 MEKK and related serin 100.0 2.4E-50 5.1E-55 388.9 16.8 262 84-468 17-283 (313)
47 cd05627 STKc_NDR2 Catalytic do 100.0 6.4E-49 1.4E-53 399.1 28.1 306 84-476 1-308 (360)
48 cd05626 STKc_LATS2 Catalytic d 100.0 3E-49 6.6E-54 404.4 25.6 321 85-482 2-327 (381)
49 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-49 3.1E-54 402.4 22.8 303 84-482 1-306 (350)
50 KOG0578 p21-activated serine/t 100.0 1.7E-50 3.7E-55 401.1 15.1 257 83-466 272-528 (550)
51 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-49 5.3E-54 396.8 23.5 269 90-480 1-272 (328)
52 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-49 3.7E-54 397.9 22.1 263 83-469 34-301 (382)
53 cd05596 STKc_ROCK Catalytic do 100.0 7.2E-49 1.6E-53 399.7 26.9 281 78-482 37-327 (370)
54 cd05621 STKc_ROCK2 Catalytic d 100.0 8E-49 1.7E-53 399.0 26.5 281 78-482 37-327 (370)
55 cd05615 STKc_cPKC_alpha Cataly 100.0 1.9E-48 4.1E-53 389.6 28.7 276 85-482 1-280 (323)
56 cd05595 STKc_PKB_beta Catalyti 100.0 4.7E-49 1E-53 394.0 24.1 269 90-480 1-272 (323)
57 cd05601 STKc_CRIK Catalytic do 100.0 5.5E-49 1.2E-53 394.9 24.6 276 84-482 1-284 (330)
58 KOG0599 Phosphorylase kinase g 100.0 3.2E-51 7E-56 370.7 7.2 271 84-477 17-299 (411)
59 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-48 2.5E-53 391.4 26.0 271 90-482 1-274 (323)
60 cd05591 STKc_nPKC_epsilon Cata 100.0 8.1E-49 1.8E-53 392.1 24.8 270 90-481 1-276 (321)
61 KOG0695 Serine/threonine prote 100.0 2E-49 4.4E-54 368.2 18.7 319 77-517 243-579 (593)
62 cd05592 STKc_nPKC_theta_delta 100.0 1.8E-48 3.8E-53 388.7 26.7 267 90-481 1-270 (316)
63 cd05620 STKc_nPKC_delta Cataly 100.0 2.1E-48 4.6E-53 388.1 27.1 268 90-482 1-271 (316)
64 cd05588 STKc_aPKC Catalytic do 100.0 2.8E-48 6.1E-53 389.4 26.9 270 90-481 1-284 (329)
65 cd05622 STKc_ROCK1 Catalytic d 100.0 4.4E-48 9.5E-53 393.9 28.0 284 77-482 36-327 (371)
66 cd05608 STKc_GRK1 Catalytic do 100.0 3.3E-48 7.2E-53 380.1 25.8 271 92-480 1-278 (280)
67 cd05619 STKc_nPKC_theta Cataly 100.0 3.2E-48 6.9E-53 386.7 25.5 268 90-482 1-271 (316)
68 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-48 2.4E-53 391.8 22.1 269 90-480 1-273 (325)
69 cd05570 STKc_PKC Catalytic dom 100.0 5.5E-48 1.2E-52 385.5 26.7 270 90-481 1-274 (318)
70 cd05603 STKc_SGK2 Catalytic do 100.0 4.5E-48 9.8E-53 386.7 25.7 270 90-481 1-273 (321)
71 cd05607 STKc_GRK7 Catalytic do 100.0 4.7E-48 1E-52 378.4 24.9 270 92-481 1-276 (277)
72 cd05605 STKc_GRK4_like Catalyt 100.0 5.4E-48 1.2E-52 379.6 25.4 276 85-481 1-283 (285)
73 cd05602 STKc_SGK1 Catalytic do 100.0 5.9E-48 1.3E-52 386.5 26.0 270 90-481 1-273 (325)
74 cd05604 STKc_SGK3 Catalytic do 100.0 3.9E-48 8.4E-53 387.8 24.6 270 90-481 1-273 (325)
75 cd05623 STKc_MRCK_alpha Cataly 100.0 8E-48 1.7E-52 386.7 26.4 278 84-482 1-287 (332)
76 cd05597 STKc_DMPK_like Catalyt 100.0 8.8E-48 1.9E-52 386.1 26.4 278 84-482 1-287 (331)
77 cd05618 STKc_aPKC_iota Catalyt 100.0 4.6E-48 1E-52 387.8 24.0 271 90-482 1-285 (329)
78 cd05624 STKc_MRCK_beta Catalyt 100.0 9.1E-48 2E-52 386.0 25.6 281 84-483 1-288 (331)
79 KOG0667 Dual-specificity tyros 100.0 6.9E-49 1.5E-53 397.0 17.1 261 85-468 187-509 (586)
80 cd05584 STKc_p70S6K Catalytic 100.0 6.7E-48 1.4E-52 385.8 24.1 265 89-472 1-267 (323)
81 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-47 3.7E-52 383.4 26.2 271 90-482 1-283 (327)
82 cd05574 STKc_phototropin_like 100.0 3E-47 6.5E-52 379.9 27.8 311 84-483 1-311 (316)
83 cd05586 STKc_Sck1_like Catalyt 100.0 6E-48 1.3E-52 387.4 22.6 269 92-481 1-275 (330)
84 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-47 3.1E-52 385.0 24.9 280 85-482 1-290 (332)
85 KOG0192 Tyrosine kinase specif 100.0 5.9E-48 1.3E-52 383.6 21.9 252 81-452 38-294 (362)
86 KOG0660 Mitogen-activated prot 100.0 7.8E-49 1.7E-53 370.4 14.5 267 84-467 22-316 (359)
87 KOG0201 Serine/threonine prote 100.0 1E-49 2.3E-54 383.6 8.5 257 84-467 13-269 (467)
88 KOG0614 cGMP-dependent protein 100.0 7.4E-49 1.6E-53 381.9 13.7 289 75-486 411-704 (732)
89 KOG0594 Protein kinase PCTAIRE 100.0 2E-48 4.4E-53 369.0 16.3 271 83-468 10-309 (323)
90 KOG0658 Glycogen synthase kina 100.0 9E-49 1.9E-53 370.6 13.1 260 85-468 25-313 (364)
91 KOG4717 Serine/threonine prote 100.0 3E-48 6.5E-53 377.9 16.1 263 84-473 18-282 (864)
92 cd05630 STKc_GRK6 Catalytic do 100.0 3.6E-47 7.8E-52 373.7 23.7 277 85-482 1-284 (285)
93 cd05582 STKc_RSK_N N-terminal 100.0 2.4E-47 5.1E-52 381.0 22.4 264 90-473 2-266 (318)
94 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-47 3.7E-52 376.6 21.0 263 83-464 4-288 (288)
95 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5E-47 1.1E-51 376.1 22.5 268 83-469 4-296 (303)
96 cd05632 STKc_GRK5 Catalytic do 100.0 3.4E-46 7.3E-51 366.8 26.3 281 85-482 1-284 (285)
97 cd07848 STKc_CDKL5 Catalytic d 100.0 9.7E-47 2.1E-51 370.9 22.5 264 84-464 1-287 (287)
98 PHA03212 serine/threonine kina 100.0 2.8E-46 6.1E-51 382.5 26.1 263 79-467 87-382 (391)
99 KOG0579 Ste20-like serine/thre 100.0 2.9E-48 6.3E-53 385.6 10.1 263 83-470 31-298 (1187)
100 PTZ00284 protein kinase; Provi 100.0 2.9E-46 6.4E-51 392.2 25.0 260 82-466 127-443 (467)
101 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-45 2.4E-50 364.1 26.7 265 84-473 1-266 (290)
102 KOG0589 Serine/threonine prote 100.0 1.3E-47 2.7E-52 378.9 12.8 259 83-465 3-262 (426)
103 cd06649 PKc_MEK2 Catalytic dom 100.0 8.1E-46 1.8E-50 372.0 25.4 267 81-469 2-309 (331)
104 PTZ00036 glycogen synthase kin 100.0 3.9E-46 8.5E-51 387.3 23.4 267 80-470 62-360 (440)
105 PLN00034 mitogen-activated pro 100.0 1.3E-45 2.9E-50 373.8 26.2 256 81-467 71-334 (353)
106 cd07862 STKc_CDK6 Catalytic do 100.0 4.3E-46 9.4E-51 366.8 20.7 264 84-464 1-290 (290)
107 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.2E-46 1.1E-50 374.4 21.6 270 85-470 1-299 (338)
108 cd05609 STKc_MAST Catalytic do 100.0 8.6E-45 1.9E-49 360.4 29.7 290 84-478 1-290 (305)
109 KOG0197 Tyrosine kinases [Sign 100.0 8.5E-47 1.8E-51 374.1 14.9 252 78-452 200-452 (468)
110 PHA03207 serine/threonine kina 100.0 1.7E-45 3.7E-50 377.9 23.3 270 83-474 91-388 (392)
111 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.1E-45 6.8E-50 368.9 22.7 289 79-452 2-325 (338)
112 cd07876 STKc_JNK2 Catalytic do 100.0 6.3E-45 1.4E-49 369.7 23.5 262 83-466 20-320 (359)
113 cd06650 PKc_MEK1 Catalytic dom 100.0 8.5E-45 1.8E-49 364.7 22.9 266 81-467 2-305 (333)
114 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-44 2.6E-49 368.4 24.0 262 83-466 23-323 (364)
115 cd05577 STKc_GRK Catalytic dom 100.0 2E-44 4.3E-49 352.7 24.6 262 92-474 1-267 (277)
116 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.9E-45 1.3E-49 362.3 21.1 266 83-467 5-292 (309)
117 PTZ00267 NIMA-related protein 100.0 8.7E-45 1.9E-49 381.4 23.5 262 84-466 67-328 (478)
118 cd07853 STKc_NLK Catalytic dom 100.0 5.2E-45 1.1E-49 372.1 21.1 267 85-469 1-296 (372)
119 PTZ00283 serine/threonine prot 100.0 8.5E-45 1.8E-49 381.8 22.9 266 81-466 29-302 (496)
120 cd07863 STKc_CDK4 Catalytic do 100.0 7.7E-45 1.7E-49 357.5 20.4 262 85-464 1-288 (288)
121 KOG0607 MAP kinase-interacting 100.0 1.7E-45 3.7E-50 340.2 14.0 263 90-470 84-370 (463)
122 KOG0604 MAP kinase-activated p 100.0 1E-45 2.2E-50 339.2 12.2 256 83-467 60-328 (400)
123 PHA03209 serine/threonine kina 100.0 2.7E-44 5.8E-49 364.6 23.6 258 83-467 65-357 (357)
124 KOG0586 Serine/threonine prote 100.0 8.6E-45 1.9E-49 363.6 19.4 258 81-466 53-311 (596)
125 cd05061 PTKc_InsR Catalytic do 100.0 4.8E-44 1.1E-48 352.0 24.5 284 80-469 2-288 (288)
126 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-44 4.2E-49 365.6 21.9 262 83-466 16-316 (355)
127 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-43 2.8E-48 385.2 29.3 152 83-269 3-154 (669)
128 KOG0574 STE20-like serine/thre 100.0 4E-47 8.7E-52 348.2 1.1 257 85-468 34-290 (502)
129 cd07868 STKc_CDK8 Catalytic do 100.0 2.3E-44 5E-49 359.3 20.4 267 89-464 6-317 (317)
130 PTZ00266 NIMA-related protein 100.0 4.3E-44 9.4E-49 388.4 23.5 270 78-470 7-304 (1021)
131 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-43 2.9E-48 343.4 24.5 258 90-470 2-260 (260)
132 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.7E-44 5.9E-49 362.8 20.3 262 83-467 14-304 (343)
133 cd05633 STKc_GRK3 Catalytic do 100.0 7.6E-44 1.7E-48 349.0 22.4 267 91-481 1-277 (279)
134 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.6E-44 1.9E-48 352.5 22.5 267 83-468 5-293 (301)
135 cd06625 STKc_MEKK3_like Cataly 100.0 2.3E-43 5E-48 342.1 24.3 260 84-464 2-263 (263)
136 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-43 2.3E-48 356.1 22.2 272 88-468 2-314 (327)
137 PHA03211 serine/threonine kina 100.0 1.8E-43 3.9E-48 366.4 24.4 260 83-466 168-460 (461)
138 cd06644 STKc_STK10_LOK Catalyt 100.0 2E-43 4.4E-48 348.2 23.7 267 81-472 9-280 (292)
139 PF00069 Pkinase: Protein kina 100.0 5.5E-44 1.2E-48 345.6 19.0 256 86-464 1-260 (260)
140 PHA03210 serine/threonine kina 100.0 1E-43 2.2E-48 374.7 22.3 284 82-472 146-465 (501)
141 KOG0577 Serine/threonine prote 100.0 2.5E-45 5.3E-50 362.7 9.0 253 85-465 27-282 (948)
142 cd08223 STKc_Nek4 Catalytic do 100.0 3.8E-43 8.2E-48 339.4 24.2 256 85-464 1-257 (257)
143 cd06615 PKc_MEK Catalytic doma 100.0 3.1E-43 6.8E-48 349.7 23.8 262 84-466 1-292 (308)
144 KOG4721 Serine/threonine prote 100.0 3.3E-45 7.2E-50 360.4 9.3 250 75-461 115-364 (904)
145 cd08529 STKc_FA2-like Catalyti 100.0 5E-43 1.1E-47 338.2 24.3 256 85-464 1-256 (256)
146 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-43 6.1E-48 341.4 22.0 256 92-470 1-261 (262)
147 cd06611 STKc_SLK_like Catalyti 100.0 2.1E-43 4.5E-48 345.9 20.5 262 83-469 4-270 (280)
148 cd06631 STKc_YSK4 Catalytic do 100.0 8.6E-43 1.9E-47 338.6 24.2 262 85-464 1-265 (265)
149 cd06637 STKc_TNIK Catalytic do 100.0 3.2E-43 6.9E-48 342.9 21.3 256 83-464 5-272 (272)
150 cd05106 PTKc_CSF-1R Catalytic 100.0 1.6E-43 3.5E-48 360.7 20.0 289 79-452 33-363 (374)
151 cd07861 STKc_CDK1_euk Catalyti 100.0 3.8E-43 8.2E-48 344.8 21.8 263 85-464 1-285 (285)
152 cd06619 PKc_MKK5 Catalytic dom 100.0 4.5E-43 9.6E-48 343.5 22.2 254 84-469 1-261 (279)
153 cd05606 STKc_beta_ARK Catalyti 100.0 4.7E-43 1E-47 343.2 22.4 262 91-476 1-270 (278)
154 cd06654 STKc_PAK1 Catalytic do 100.0 7.6E-43 1.7E-47 344.9 23.3 258 83-467 19-276 (296)
155 cd05104 PTKc_Kit Catalytic dom 100.0 3.2E-43 7E-48 358.8 21.2 292 80-460 31-369 (375)
156 KOG0596 Dual specificity; seri 100.0 1.1E-43 2.4E-48 349.6 17.0 261 81-467 358-633 (677)
157 cd05579 STKc_MAST_like Catalyt 100.0 7.8E-43 1.7E-47 338.1 22.7 265 92-469 1-265 (265)
158 KOG4279 Serine/threonine prote 100.0 7.3E-44 1.6E-48 357.6 15.7 254 90-467 581-838 (1226)
159 KOG0193 Serine/threonine prote 100.0 8.4E-44 1.8E-48 354.6 15.1 257 77-452 385-644 (678)
160 KOG1026 Nerve growth factor re 100.0 1.1E-43 2.3E-48 368.5 16.4 271 80-452 482-753 (774)
161 PHA02988 hypothetical protein; 100.0 9.7E-43 2.1E-47 341.8 21.9 238 90-452 26-270 (283)
162 cd05048 PTKc_Ror Catalytic Dom 100.0 8.7E-43 1.9E-47 342.0 21.4 277 81-461 2-279 (283)
163 cd06643 STKc_SLK Catalytic dom 100.0 1.4E-42 3.1E-47 340.4 22.8 258 85-467 6-268 (282)
164 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-42 2.3E-47 341.2 21.9 257 82-464 14-282 (282)
165 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.3E-42 7.1E-47 334.8 25.0 261 85-464 1-267 (267)
166 cd06656 STKc_PAK3 Catalytic do 100.0 9E-43 1.9E-47 344.6 21.3 258 83-467 18-275 (297)
167 cd06645 STKc_MAP4K3 Catalytic 100.0 6.4E-43 1.4E-47 339.9 19.8 258 82-463 7-267 (267)
168 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.8E-42 3.9E-47 336.3 23.0 265 84-464 1-267 (267)
169 KOG1989 ARK protein kinase fam 100.0 1.8E-43 4E-48 368.5 17.0 272 81-468 34-322 (738)
170 cd06655 STKc_PAK2 Catalytic do 100.0 3.5E-42 7.5E-47 340.2 25.3 259 83-468 18-276 (296)
171 cd05578 STKc_Yank1 Catalytic d 100.0 1E-42 2.2E-47 336.8 21.0 255 85-464 1-258 (258)
172 KOG0671 LAMMER dual specificit 100.0 2.4E-44 5.2E-49 341.0 9.2 266 79-467 84-412 (415)
173 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-42 2.5E-47 346.9 21.7 267 89-464 6-317 (317)
174 cd05096 PTKc_DDR1 Catalytic do 100.0 3.2E-42 6.8E-47 341.8 24.2 277 81-452 2-296 (304)
175 cd08218 STKc_Nek1 Catalytic do 100.0 2.9E-42 6.3E-47 333.0 22.9 256 85-464 1-256 (256)
176 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.3E-42 7.1E-47 335.0 23.4 253 82-452 3-256 (266)
177 cd08221 STKc_Nek9 Catalytic do 100.0 4.7E-42 1E-46 331.6 24.0 256 85-464 1-256 (256)
178 cd06639 STKc_myosinIIIB Cataly 100.0 6.5E-42 1.4E-46 337.3 25.5 259 82-465 20-291 (291)
179 cd06612 STKc_MST1_2 Catalytic 100.0 3.2E-42 7E-47 332.5 22.5 255 83-464 2-256 (256)
180 KOG4236 Serine/threonine prote 100.0 3.6E-44 7.9E-49 350.2 8.7 263 89-476 569-835 (888)
181 KOG0194 Protein tyrosine kinas 100.0 3.7E-43 8E-48 353.7 16.0 264 74-452 147-411 (474)
182 cd05583 STKc_MSK_N N-terminal 100.0 7.4E-42 1.6E-46 336.4 25.0 269 85-472 1-277 (288)
183 cd06609 STKc_MST3_like Catalyt 100.0 2.8E-42 6.1E-47 336.8 21.8 258 84-468 1-258 (274)
184 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-42 3.8E-47 336.9 20.1 258 82-463 7-267 (267)
185 cd05062 PTKc_IGF-1R Catalytic 100.0 5E-42 1.1E-46 335.6 23.5 271 81-461 3-274 (277)
186 cd07845 STKc_CDK10 Catalytic d 100.0 3.1E-42 6.7E-47 342.7 22.1 269 82-468 5-297 (309)
187 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-42 3.9E-47 340.4 20.0 258 84-468 1-269 (286)
188 cd06638 STKc_myosinIIIA Cataly 100.0 5.6E-42 1.2E-46 336.7 23.6 260 82-464 16-286 (286)
189 cd05105 PTKc_PDGFR_alpha Catal 100.0 3E-42 6.6E-47 353.1 22.5 289 79-452 32-388 (400)
190 cd08220 STKc_Nek8 Catalytic do 100.0 6.3E-42 1.4E-46 330.5 23.3 255 85-464 1-256 (256)
191 cd05054 PTKc_VEGFR Catalytic d 100.0 2E-42 4.3E-47 347.9 20.6 294 79-461 2-329 (337)
192 KOG0666 Cyclin C-dependent kin 100.0 1.1E-43 2.4E-48 327.2 10.4 278 83-467 23-343 (438)
193 cd07839 STKc_CDK5 Catalytic do 100.0 1.5E-42 3.3E-47 340.4 19.0 262 85-464 1-284 (284)
194 KOG0662 Cyclin-dependent kinas 100.0 1.4E-43 3.1E-48 302.6 10.0 265 85-467 3-289 (292)
195 cd08219 STKc_Nek3 Catalytic do 100.0 5.7E-42 1.2E-46 330.9 22.5 251 85-460 1-251 (255)
196 cd06613 STKc_MAP4K3_like Catal 100.0 8.6E-42 1.9E-46 330.7 23.8 258 83-463 2-262 (262)
197 cd05049 PTKc_Trk Catalytic dom 100.0 3.4E-42 7.4E-47 337.1 21.1 273 82-460 3-276 (280)
198 cd06651 STKc_MEKK3 Catalytic d 100.0 7.6E-42 1.6E-46 332.3 23.3 260 84-465 2-265 (266)
199 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.7E-42 1E-46 337.1 21.9 263 84-464 1-286 (286)
200 cd06652 STKc_MEKK2 Catalytic d 100.0 1.1E-41 2.4E-46 330.9 24.2 260 84-465 2-265 (265)
201 cd07860 STKc_CDK2_3 Catalytic 100.0 2.6E-42 5.5E-47 338.8 19.7 263 85-464 1-284 (284)
202 PRK13184 pknD serine/threonine 100.0 6.4E-42 1.4E-46 370.1 24.5 280 83-453 1-281 (932)
203 cd06608 STKc_myosinIII_like Ca 100.0 6E-42 1.3E-46 334.0 21.9 257 83-464 5-275 (275)
204 cd07844 STKc_PCTAIRE_like Cata 100.0 5.2E-42 1.1E-46 337.9 21.6 263 83-464 4-291 (291)
205 cd07850 STKc_JNK Catalytic dom 100.0 5.3E-42 1.1E-46 347.5 21.9 262 83-466 15-316 (353)
206 cd06630 STKc_MEKK1 Catalytic d 100.0 7.6E-42 1.6E-46 332.4 22.1 261 85-465 1-268 (268)
207 cd07841 STKc_CDK7 Catalytic do 100.0 5.4E-42 1.2E-46 339.0 21.4 266 85-467 1-288 (298)
208 KOG0983 Mitogen-activated prot 100.0 2.1E-42 4.6E-47 313.6 16.7 260 81-466 89-354 (391)
209 cd06658 STKc_PAK5 Catalytic do 100.0 3.4E-42 7.3E-47 339.6 19.5 257 84-467 22-278 (292)
210 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-41 3.5E-46 329.5 23.8 250 81-452 3-253 (263)
211 cd07832 STKc_CCRK Catalytic do 100.0 5.4E-42 1.2E-46 336.7 20.5 264 85-465 1-286 (286)
212 cd05613 STKc_MSK1_N N-terminal 100.0 2.9E-41 6.2E-46 332.5 25.5 271 85-473 1-280 (290)
213 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-41 2.8E-46 328.8 22.4 250 83-460 3-253 (256)
214 cd05581 STKc_PDK1 Catalytic do 100.0 1.1E-41 2.4E-46 333.1 22.2 279 84-464 1-280 (280)
215 cd05090 PTKc_Ror1 Catalytic do 100.0 1.5E-41 3.2E-46 333.4 23.0 277 81-461 2-279 (283)
216 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-41 3.2E-46 329.2 22.5 250 80-452 2-252 (261)
217 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.8E-41 6E-46 332.2 24.8 266 84-468 1-273 (287)
218 PHA03390 pk1 serine/threonine- 100.0 1.1E-41 2.3E-46 331.6 21.6 245 84-466 14-267 (267)
219 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.8E-42 8.2E-47 337.9 18.0 263 84-464 1-286 (286)
220 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-41 3.2E-46 330.2 22.0 257 84-460 2-260 (267)
221 cd05055 PTKc_PDGFR Catalytic d 100.0 2.5E-41 5.4E-46 335.0 23.6 261 79-452 30-292 (302)
222 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-41 3.3E-46 333.1 21.7 262 84-470 1-270 (283)
223 cd05093 PTKc_TrkB Catalytic do 100.0 4E-41 8.7E-46 331.2 24.6 266 83-452 4-270 (288)
224 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.5E-41 7.7E-46 328.6 23.9 260 85-464 2-272 (272)
225 cd07837 STKc_CdkB_plant Cataly 100.0 2.3E-41 4.9E-46 334.0 22.7 267 84-465 1-295 (295)
226 cd06659 STKc_PAK6 Catalytic do 100.0 8.6E-42 1.9E-46 337.5 19.6 257 84-467 21-277 (297)
227 cd08226 PK_STRAD_beta Pseudoki 100.0 6.3E-42 1.4E-46 343.4 18.9 270 90-468 4-315 (328)
228 cd05032 PTKc_InsR_like Catalyt 100.0 3.3E-41 7.2E-46 329.6 23.5 270 80-460 2-273 (277)
229 cd08225 STKc_Nek5 Catalytic do 100.0 3.1E-41 6.7E-46 325.8 22.8 256 85-464 1-257 (257)
230 cd05094 PTKc_TrkC Catalytic do 100.0 4.1E-41 8.8E-46 331.7 24.0 270 82-452 3-273 (291)
231 PLN00009 cyclin-dependent kina 100.0 2.2E-41 4.7E-46 334.0 22.1 269 83-468 1-291 (294)
232 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-41 4.2E-46 333.9 21.7 263 83-464 4-291 (291)
233 cd06605 PKc_MAPKK Catalytic do 100.0 8.4E-42 1.8E-46 331.5 18.7 256 84-466 1-262 (265)
234 cd06648 STKc_PAK_II Catalytic 100.0 5.3E-41 1.2E-45 329.9 24.5 256 85-467 20-275 (285)
235 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-41 2.5E-46 334.4 19.6 256 82-466 3-271 (284)
236 cd06640 STKc_MST4 Catalytic do 100.0 1.3E-41 2.8E-46 332.7 19.9 257 84-468 4-260 (277)
237 cd05091 PTKc_Ror2 Catalytic do 100.0 1.7E-41 3.7E-46 332.9 20.7 276 81-460 2-278 (283)
238 KOG0584 Serine/threonine prote 100.0 1.1E-42 2.3E-47 348.9 12.2 253 87-467 43-302 (632)
239 cd06616 PKc_MKK4 Catalytic dom 100.0 8.1E-42 1.7E-46 336.1 18.0 266 83-471 3-277 (288)
240 cd05053 PTKc_FGFR Catalytic do 100.0 3E-41 6.4E-46 332.9 22.1 279 79-461 7-287 (293)
241 cd07849 STKc_ERK1_2_like Catal 100.0 2.8E-41 6E-46 339.9 22.3 266 84-467 5-298 (336)
242 cd08217 STKc_Nek2 Catalytic do 100.0 3.9E-41 8.5E-46 326.2 22.5 256 85-464 1-265 (265)
243 cd06624 STKc_ASK Catalytic dom 100.0 6.7E-41 1.4E-45 326.0 24.1 257 82-464 6-268 (268)
244 cd06647 STKc_PAK_I Catalytic d 100.0 2E-41 4.4E-46 334.2 20.5 258 83-468 18-276 (293)
245 cd07865 STKc_CDK9 Catalytic do 100.0 3.1E-41 6.8E-46 335.2 21.9 268 83-464 11-310 (310)
246 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.7E-42 1E-46 335.8 15.6 258 84-469 4-261 (277)
247 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.6E-41 9.9E-46 325.0 21.8 251 83-461 3-254 (256)
248 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-41 2.4E-46 336.1 17.6 264 83-464 4-293 (293)
249 cd05108 PTKc_EGFR Catalytic do 100.0 5E-41 1.1E-45 335.1 22.6 260 81-461 4-264 (316)
250 cd06623 PKc_MAPKK_plant_like C 100.0 7.2E-41 1.6E-45 324.5 22.9 259 84-468 1-263 (264)
251 cd08229 STKc_Nek7 Catalytic do 100.0 5.2E-41 1.1E-45 326.4 21.9 253 84-452 2-256 (267)
252 cd05068 PTKc_Frk_like Catalyti 100.0 7.9E-41 1.7E-45 324.2 23.1 249 81-452 3-252 (261)
253 cd05033 PTKc_EphR Catalytic do 100.0 8.1E-41 1.8E-45 325.0 23.1 258 83-461 3-261 (266)
254 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.1E-41 1.5E-45 327.6 22.8 267 81-461 3-274 (277)
255 KOG2345 Serine/threonine prote 100.0 1.8E-42 3.8E-47 310.4 10.3 268 80-461 17-296 (302)
256 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-40 3.1E-45 329.9 25.1 278 79-460 10-291 (304)
257 cd05088 PTKc_Tie2 Catalytic do 100.0 3.7E-41 8.1E-46 334.0 20.9 272 80-461 3-276 (303)
258 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-40 3.9E-45 321.8 25.1 259 85-464 1-264 (264)
259 cd05092 PTKc_TrkA Catalytic do 100.0 1E-40 2.2E-45 327.0 23.2 269 82-452 3-272 (280)
260 cd06641 STKc_MST3 Catalytic do 100.0 6.2E-41 1.3E-45 328.0 21.3 254 85-466 5-258 (277)
261 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-40 2.3E-45 322.2 22.6 255 85-464 1-258 (258)
262 cd07842 STKc_CDK8_like Catalyt 100.0 5.6E-41 1.2E-45 334.4 21.2 271 85-464 1-316 (316)
263 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.1E-41 1.1E-45 338.8 21.1 294 79-461 2-335 (343)
264 KOG1095 Protein tyrosine kinas 100.0 4.2E-41 9.1E-46 361.3 21.2 263 81-452 689-952 (1025)
265 cd07836 STKc_Pho85 Catalytic d 100.0 5.4E-41 1.2E-45 329.3 20.4 262 85-464 1-284 (284)
266 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-40 2.4E-45 331.3 22.5 277 80-460 14-294 (307)
267 cd06917 STKc_NAK1_like Catalyt 100.0 5.9E-41 1.3E-45 327.9 20.2 257 85-468 2-262 (277)
268 cd07833 STKc_CDKL Catalytic do 100.0 1E-40 2.2E-45 327.9 22.0 264 84-464 1-288 (288)
269 cd06607 STKc_TAO Catalytic dom 100.0 9.2E-41 2E-45 331.8 21.7 257 82-466 13-272 (307)
270 cd05071 PTKc_Src Catalytic dom 100.0 1.4E-40 3E-45 322.8 22.2 248 81-452 3-251 (262)
271 cd08215 STKc_Nek Catalytic dom 100.0 2.4E-40 5.2E-45 319.2 23.6 256 85-464 1-258 (258)
272 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.6E-41 1.7E-45 324.1 20.1 248 82-452 4-252 (261)
273 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.7E-40 8.1E-45 320.1 25.0 259 84-464 2-264 (264)
274 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-40 2.2E-45 341.7 21.9 293 79-460 32-394 (401)
275 cd05046 PTK_CCK4 Pseudokinase 100.0 1.8E-40 4E-45 324.1 22.8 268 83-461 4-272 (275)
276 cd08216 PK_STRAD Pseudokinase 100.0 8E-41 1.7E-45 333.2 20.4 270 88-468 6-302 (314)
277 cd05059 PTKc_Tec_like Catalyti 100.0 9.6E-41 2.1E-45 322.7 20.2 250 83-460 3-253 (256)
278 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-40 3.3E-45 322.0 21.5 249 80-452 2-251 (260)
279 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.2E-40 7E-45 329.0 24.4 273 80-452 8-284 (314)
280 cd07831 STKc_MOK Catalytic dom 100.0 2E-40 4.4E-45 324.8 22.6 258 86-464 1-282 (282)
281 cd06614 STKc_PAK Catalytic dom 100.0 1.4E-40 3E-45 327.0 21.5 263 82-470 17-279 (286)
282 cd05123 STKc_AGC Catalytic dom 100.0 2.2E-40 4.8E-45 318.5 22.4 250 92-464 1-250 (250)
283 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.2E-41 2E-45 336.9 20.7 263 83-468 14-305 (343)
284 cd07855 STKc_ERK5 Catalytic do 100.0 6.5E-41 1.4E-45 336.9 19.1 270 84-468 5-301 (334)
285 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-40 3.5E-45 321.8 21.1 249 80-452 2-251 (260)
286 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.8E-40 8.3E-45 320.1 23.6 253 84-452 2-256 (267)
287 cd05050 PTKc_Musk Catalytic do 100.0 2.7E-40 5.7E-45 325.3 22.6 276 82-452 3-280 (288)
288 KOG1290 Serine/threonine prote 100.0 4.5E-40 9.7E-45 319.9 23.5 136 81-254 75-223 (590)
289 cd05082 PTKc_Csk Catalytic dom 100.0 2.8E-40 6E-45 319.4 22.2 243 81-452 3-247 (256)
290 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.2E-40 2.6E-45 335.4 20.4 265 84-467 5-297 (337)
291 cd05035 PTKc_Axl_like Catalyti 100.0 2.3E-40 5E-45 322.7 21.7 260 86-460 1-267 (273)
292 cd05034 PTKc_Src_like Catalyti 100.0 4E-40 8.7E-45 319.0 22.6 250 80-452 2-252 (261)
293 cd07877 STKc_p38alpha_MAPK14 C 100.0 2E-40 4.4E-45 334.7 21.3 261 83-466 16-305 (345)
294 cd05084 PTKc_Fes Catalytic dom 100.0 3.2E-40 6.9E-45 318.2 21.6 243 90-452 1-244 (252)
295 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-40 3.1E-45 326.3 19.5 262 86-464 1-283 (283)
296 cd05051 PTKc_DDR Catalytic dom 100.0 3.5E-40 7.5E-45 325.7 22.4 271 82-460 3-292 (296)
297 cd05109 PTKc_HER2 Catalytic do 100.0 5.3E-40 1.1E-44 321.7 23.5 259 81-460 4-263 (279)
298 cd05045 PTKc_RET Catalytic dom 100.0 3.7E-40 8E-45 324.7 22.4 274 85-452 1-277 (290)
299 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.3E-40 1.1E-44 330.3 23.9 279 79-461 7-289 (334)
300 KOG0603 Ribosomal protein S6 k 100.0 6.3E-41 1.4E-45 337.6 17.0 244 82-464 320-566 (612)
301 cd06633 STKc_TAO3 Catalytic do 100.0 6.1E-40 1.3E-44 326.8 24.0 256 85-468 22-280 (313)
302 cd07838 STKc_CDK4_6_like Catal 100.0 4.1E-40 9E-45 323.3 22.3 261 86-464 1-287 (287)
303 cd06657 STKc_PAK4 Catalytic do 100.0 2.6E-40 5.7E-45 326.1 20.9 254 87-467 23-276 (292)
304 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-40 9E-45 325.5 22.3 263 84-452 2-266 (297)
305 cd05066 PTKc_EphR_A Catalytic 100.0 5.3E-40 1.1E-44 319.5 22.7 254 83-452 3-257 (267)
306 cd05069 PTKc_Yes Catalytic dom 100.0 5.4E-40 1.2E-44 318.2 22.6 248 81-452 3-251 (260)
307 cd05111 PTK_HER3 Pseudokinase 100.0 6E-40 1.3E-44 321.4 23.0 259 81-460 4-263 (279)
308 cd05075 PTKc_Axl Catalytic dom 100.0 4.2E-40 9.2E-45 320.9 21.8 259 86-460 1-266 (272)
309 cd05095 PTKc_DDR2 Catalytic do 100.0 1E-39 2.2E-44 322.6 24.5 267 82-452 3-288 (296)
310 cd05073 PTKc_Hck Catalytic dom 100.0 1.2E-39 2.6E-44 315.8 24.3 249 80-452 2-251 (260)
311 cd05039 PTKc_Csk_like Catalyti 100.0 1E-39 2.3E-44 315.3 23.5 244 81-452 3-247 (256)
312 KOG0669 Cyclin T-dependent kin 100.0 1.5E-42 3.2E-47 311.2 3.2 270 83-466 16-320 (376)
313 cd07866 STKc_BUR1 Catalytic do 100.0 3.1E-40 6.7E-45 328.2 20.2 275 83-464 7-311 (311)
314 cd07834 STKc_MAPK Catalytic do 100.0 1.7E-40 3.8E-45 333.2 18.5 267 85-467 1-295 (330)
315 cd05122 PKc_STE Catalytic doma 100.0 1.5E-39 3.2E-44 312.3 24.1 253 85-463 1-253 (253)
316 PTZ00024 cyclin-dependent prot 100.0 3.3E-40 7.2E-45 331.9 20.5 281 84-468 8-320 (335)
317 PF07714 Pkinase_Tyr: Protein 100.0 2.5E-40 5.4E-45 320.5 18.8 255 87-460 2-257 (259)
318 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.4E-40 7.4E-45 332.7 20.6 265 84-467 5-306 (342)
319 cd05116 PTKc_Syk Catalytic dom 100.0 8.5E-40 1.9E-44 316.2 22.5 244 91-452 2-246 (257)
320 KOG4645 MAPKKK (MAP kinase kin 100.0 1.7E-42 3.7E-47 369.8 3.9 259 85-466 1236-1499(1509)
321 cd06627 STKc_Cdc7_like Catalyt 100.0 1.3E-39 2.8E-44 313.6 23.6 254 85-464 1-254 (254)
322 cd05040 PTKc_Ack_like Catalyti 100.0 1E-39 2.2E-44 315.5 22.9 248 90-452 1-249 (257)
323 KOG1035 eIF-2alpha kinase GCN2 100.0 4.4E-41 9.6E-46 357.5 14.4 275 83-465 478-875 (1351)
324 cd00192 PTKc Catalytic domain 100.0 9.9E-40 2.1E-44 315.6 22.7 252 90-461 1-260 (262)
325 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-39 2.4E-44 317.6 23.1 252 90-452 1-261 (269)
326 cd06606 STKc_MAPKKK Catalytic 100.0 1.9E-39 4E-44 313.0 24.3 257 85-464 1-260 (260)
327 cd05097 PTKc_DDR_like Catalyti 100.0 7.6E-40 1.6E-44 323.3 22.1 268 82-452 3-287 (295)
328 cd07864 STKc_CDK12 Catalytic d 100.0 3.3E-40 7.1E-45 326.8 19.6 267 81-464 4-302 (302)
329 cd06635 STKc_TAO1 Catalytic do 100.0 7E-40 1.5E-44 326.9 22.0 255 84-466 25-282 (317)
330 cd07879 STKc_p38delta_MAPK13 C 100.0 4.3E-40 9.2E-45 332.0 20.6 262 84-469 15-305 (342)
331 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-39 2.9E-44 316.7 23.3 256 81-452 2-258 (268)
332 cd07851 STKc_p38 Catalytic dom 100.0 3.9E-40 8.5E-45 332.4 20.2 262 83-467 14-304 (343)
333 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-39 2.3E-44 314.8 22.3 256 85-464 1-256 (256)
334 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-39 2.6E-44 322.1 23.2 262 79-466 10-278 (296)
335 cd08222 STKc_Nek11 Catalytic d 100.0 4.5E-40 9.8E-45 318.6 19.6 258 85-464 1-260 (260)
336 cd05065 PTKc_EphR_B Catalytic 100.0 1.5E-39 3.3E-44 316.6 22.9 260 83-460 3-263 (269)
337 cd07840 STKc_CDK9_like Catalyt 100.0 7.8E-40 1.7E-44 321.2 20.4 262 86-464 1-287 (287)
338 cd05060 PTKc_Syk_like Catalyti 100.0 1.9E-39 4.1E-44 313.7 22.8 245 90-452 1-246 (257)
339 cd05115 PTKc_Zap-70 Catalytic 100.0 2.2E-39 4.7E-44 313.5 23.0 244 91-452 2-246 (257)
340 cd05118 STKc_CMGC Catalytic do 100.0 6.7E-40 1.5E-44 321.2 19.6 261 86-464 1-283 (283)
341 cd06634 STKc_TAO2 Catalytic do 100.0 1E-39 2.3E-44 324.4 21.2 256 84-467 15-273 (308)
342 cd05083 PTKc_Chk Catalytic dom 100.0 1.6E-39 3.4E-44 313.8 21.5 241 82-452 4-245 (254)
343 cd07857 STKc_MPK1 Catalytic do 100.0 1.6E-39 3.5E-44 326.5 22.2 269 85-466 1-297 (332)
344 cd05112 PTKc_Itk Catalytic dom 100.0 2.8E-39 6E-44 312.2 22.4 250 83-460 3-253 (256)
345 cd05057 PTKc_EGFR_like Catalyt 100.0 4.2E-39 9E-44 315.3 23.7 255 81-452 4-259 (279)
346 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.2E-39 4.8E-44 324.7 22.2 262 82-466 8-293 (328)
347 KOG1187 Serine/threonine prote 100.0 1E-39 2.2E-44 327.0 19.6 258 83-455 74-346 (361)
348 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.9E-39 8.4E-44 313.8 23.1 251 90-452 1-261 (269)
349 KOG0587 Traf2- and Nck-interac 100.0 5.7E-40 1.2E-44 339.1 17.9 262 80-466 15-287 (953)
350 cd07830 STKc_MAK_like Catalyti 100.0 1.9E-39 4E-44 318.3 20.5 260 86-464 1-283 (283)
351 cd07852 STKc_MAPK15 Catalytic 100.0 9.4E-40 2E-44 328.9 18.8 270 83-467 6-301 (337)
352 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.7E-39 1E-43 315.6 22.5 253 84-452 3-272 (283)
353 cd05056 PTKc_FAK Catalytic dom 100.0 6.8E-39 1.5E-43 312.2 23.4 252 82-452 4-256 (270)
354 cd05043 PTK_Ryk Pseudokinase d 100.0 6.8E-39 1.5E-43 313.9 23.2 263 81-452 3-267 (280)
355 cd07829 STKc_CDK_like Catalyti 100.0 1E-39 2.2E-44 319.8 17.2 261 86-464 1-282 (282)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.6E-39 3.5E-44 314.5 18.0 243 90-460 1-255 (258)
357 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.9E-39 1.3E-43 315.1 21.9 258 85-460 5-278 (284)
358 smart00219 TyrKc Tyrosine kina 100.0 6.4E-39 1.4E-43 309.6 21.7 255 86-460 1-256 (258)
359 cd05085 PTKc_Fer Catalytic dom 100.0 9.7E-39 2.1E-43 307.3 22.7 241 90-452 1-242 (250)
360 cd05047 PTKc_Tie Catalytic dom 100.0 5.8E-39 1.3E-43 312.8 21.2 257 90-452 1-259 (270)
361 KOG0670 U4/U6-associated splic 100.0 2.2E-40 4.7E-45 323.6 10.9 270 76-466 424-751 (752)
362 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-38 2.5E-43 309.0 22.6 252 90-460 1-254 (262)
363 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.1E-39 1.8E-43 310.4 21.4 244 90-461 1-260 (262)
364 cd05044 PTKc_c-ros Catalytic d 100.0 5E-39 1.1E-43 312.8 19.8 254 90-452 1-261 (269)
365 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-38 3.9E-43 309.1 23.1 248 91-452 2-260 (268)
366 cd05110 PTKc_HER4 Catalytic do 100.0 1.3E-38 2.7E-43 315.9 21.9 255 81-452 4-259 (303)
367 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-38 2.7E-43 311.2 21.5 243 91-461 2-272 (274)
368 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.2E-38 7E-43 309.8 23.9 258 84-460 4-278 (284)
369 cd05576 STKc_RPK118_like Catal 100.0 5.1E-39 1.1E-43 307.1 17.5 233 95-464 4-237 (237)
370 cd05041 PTKc_Fes_like Catalyti 100.0 2.2E-38 4.9E-43 305.0 21.5 246 90-460 1-247 (251)
371 KOG1094 Discoidin domain recep 100.0 7.1E-39 1.5E-43 317.0 18.1 255 80-452 534-795 (807)
372 KOG4250 TANK binding protein k 100.0 2.6E-39 5.6E-44 328.4 15.4 249 85-449 14-296 (732)
373 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-38 5.7E-43 305.7 21.1 241 90-460 1-256 (259)
374 PHA02882 putative serine/threo 100.0 5.6E-38 1.2E-42 309.8 23.3 262 81-460 9-291 (294)
375 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.7E-38 5.9E-43 308.3 20.6 260 86-460 1-267 (273)
376 KOG4257 Focal adhesion tyrosin 100.0 4.5E-39 9.8E-44 320.2 15.1 281 81-480 386-683 (974)
377 cd08528 STKc_Nek10 Catalytic d 100.0 3E-38 6.6E-43 307.4 20.7 252 85-452 1-261 (269)
378 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.8E-38 1E-42 308.2 21.3 255 84-452 4-274 (284)
379 PLN03225 Serine/threonine-prot 100.0 4.5E-38 9.9E-43 333.8 22.1 291 78-470 126-459 (566)
380 KOG4278 Protein tyrosine kinas 100.0 1.6E-38 3.4E-43 315.9 16.2 253 78-452 261-514 (1157)
381 KOG0199 ACK and related non-re 100.0 3.6E-39 7.7E-44 324.6 11.8 256 81-452 107-363 (1039)
382 KOG0668 Casein kinase II, alph 100.0 4E-39 8.6E-44 285.3 9.0 260 82-468 36-329 (338)
383 KOG1006 Mitogen-activated prot 100.0 4.7E-40 1E-44 297.3 2.1 265 80-466 60-332 (361)
384 KOG0665 Jun-N-terminal kinase 100.0 8.7E-39 1.9E-43 296.6 10.1 270 84-478 17-325 (369)
385 KOG0196 Tyrosine kinase, EPH ( 100.0 1.4E-38 3E-43 324.4 11.8 262 79-460 624-886 (996)
386 KOG1151 Tousled-like protein k 100.0 8.4E-39 1.8E-43 307.0 8.9 268 82-466 461-746 (775)
387 PLN03224 probable serine/threo 100.0 3.4E-36 7.3E-41 311.9 23.3 294 78-466 139-505 (507)
388 KOG1027 Serine/threonine prote 100.0 3.7E-37 8E-42 317.0 11.7 252 86-464 511-770 (903)
389 KOG0664 Nemo-like MAPK-related 100.0 2.1E-37 4.5E-42 280.9 6.1 267 85-469 54-351 (449)
390 smart00220 S_TKc Serine/Threon 100.0 6.3E-35 1.4E-39 278.2 21.3 243 96-464 1-244 (244)
391 KOG0576 Mitogen-activated prot 100.0 2.2E-36 4.7E-41 303.8 7.3 262 82-467 13-277 (829)
392 KOG0984 Mitogen-activated prot 100.0 1.4E-35 3E-40 259.2 10.8 222 81-415 43-271 (282)
393 KOG3653 Transforming growth fa 100.0 4E-35 8.6E-40 284.9 14.8 247 82-452 208-494 (534)
394 KOG1152 Signal transduction se 100.0 7E-36 1.5E-40 295.6 9.4 203 82-399 559-771 (772)
395 KOG2052 Activin A type IB rece 100.0 1.3E-34 2.8E-39 279.3 16.5 250 84-452 211-494 (513)
396 KOG0200 Fibroblast/platelet-de 100.0 3.3E-34 7.1E-39 307.2 21.5 278 78-460 290-578 (609)
397 PLN00113 leucine-rich repeat r 100.0 8.8E-35 1.9E-39 331.8 17.4 240 85-452 691-942 (968)
398 KOG1167 Serine/threonine prote 100.0 2.2E-35 4.8E-40 283.9 8.9 302 83-468 35-388 (418)
399 KOG1025 Epidermal growth facto 100.0 3.1E-34 6.8E-39 293.6 11.8 253 85-454 697-950 (1177)
400 KOG1024 Receptor-like protein 100.0 2.7E-32 5.8E-37 259.0 18.8 266 79-452 279-546 (563)
401 KOG1345 Serine/threonine kinas 100.0 6.3E-32 1.4E-36 245.4 8.6 240 83-449 23-276 (378)
402 KOG0603 Ribosomal protein S6 k 100.0 9.8E-33 2.1E-37 278.5 2.1 263 91-483 1-267 (612)
403 cd00180 PKc Catalytic domain o 100.0 1.1E-29 2.3E-34 236.1 19.3 213 92-462 1-215 (215)
404 PLN00181 protein SPA1-RELATED; 100.0 2.4E-31 5.2E-36 296.0 9.4 236 145-467 28-271 (793)
405 smart00221 STYKc Protein kinas 100.0 1.8E-29 3.9E-34 238.1 20.8 215 86-413 1-218 (225)
406 KOG0606 Microtubule-associated 100.0 1.9E-30 4E-35 273.9 10.9 254 83-482 82-336 (1205)
407 KOG0590 Checkpoint kinase and 100.0 1.4E-29 3E-34 268.2 6.1 274 87-472 321-596 (601)
408 smart00750 KIND kinase non-cat 99.9 6.9E-28 1.5E-32 219.1 11.7 149 222-465 20-169 (176)
409 PRK09188 serine/threonine prot 99.9 7.3E-27 1.6E-31 232.6 14.5 145 80-269 14-162 (365)
410 COG0515 SPS1 Serine/threonine 99.9 3E-25 6.5E-30 220.4 23.8 268 86-466 2-280 (384)
411 KOG1165 Casein kinase (serine/ 99.9 2.8E-26 6E-31 214.3 14.4 219 84-413 28-255 (449)
412 KOG1164 Casein kinase (serine/ 99.9 1.3E-25 2.8E-30 224.0 17.9 258 85-452 19-288 (322)
413 KOG1163 Casein kinase (serine/ 99.9 3.6E-26 7.8E-31 204.7 11.3 225 81-416 12-243 (341)
414 PRK10359 lipopolysaccharide co 99.9 1.5E-24 3.2E-29 201.2 11.9 139 82-266 29-181 (232)
415 PRK12274 serine/threonine prot 99.9 3.9E-23 8.5E-28 187.5 15.3 203 87-402 5-212 (218)
416 KOG4158 BRPK/PTEN-induced prot 99.9 8.8E-24 1.9E-28 201.9 9.7 278 80-469 153-521 (598)
417 PF14531 Kinase-like: Kinase-l 99.9 2.3E-23 5E-28 198.9 11.0 240 85-448 13-288 (288)
418 KOG1240 Protein kinase contain 99.9 3.4E-24 7.4E-29 226.9 4.1 243 85-461 24-291 (1431)
419 cd05147 RIO1_euk RIO kinase fa 99.9 2.7E-23 5.8E-28 190.6 9.3 142 89-269 2-167 (190)
420 KOG1033 eIF-2alpha kinase PEK/ 99.9 8.3E-24 1.8E-28 210.2 3.7 154 221-464 361-515 (516)
421 cd05145 RIO1_like RIO kinase f 99.9 5E-22 1.1E-26 182.7 13.0 144 89-271 2-169 (190)
422 KOG0606 Microtubule-associated 99.9 1.8E-22 4E-27 213.8 7.8 314 81-483 801-1114(1205)
423 KOG0195 Integrin-linked kinase 99.9 9.5E-22 2.1E-26 179.2 9.0 242 81-452 187-437 (448)
424 PRK10345 hypothetical protein; 99.9 4.6E-21 1E-25 177.4 12.3 136 88-267 6-157 (210)
425 KOG1166 Mitotic checkpoint ser 99.8 6.1E-21 1.3E-25 206.3 8.8 197 81-395 695-901 (974)
426 smart00090 RIO RIO-like kinase 99.8 8.3E-20 1.8E-24 173.1 10.8 146 85-270 29-199 (237)
427 KOG0590 Checkpoint kinase and 99.8 2E-21 4.2E-26 206.2 -0.6 266 84-466 20-291 (601)
428 PRK14879 serine/threonine prot 99.8 5.8E-19 1.3E-23 165.3 14.3 137 90-268 2-143 (211)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 9.3E-19 2E-23 162.4 14.6 132 91-267 1-137 (199)
430 PRK09605 bifunctional UGMP fam 99.8 6.2E-19 1.3E-23 187.7 14.4 139 84-268 333-476 (535)
431 cd05144 RIO2_C RIO kinase fami 99.8 8.3E-19 1.8E-23 162.5 10.7 139 86-270 17-176 (198)
432 KOG1023 Natriuretic peptide re 99.8 7.6E-18 1.6E-22 171.1 13.3 203 143-452 1-215 (484)
433 cd05119 RIO RIO kinase family, 99.7 1.8E-17 4E-22 152.0 10.5 140 89-271 2-166 (187)
434 PRK01723 3-deoxy-D-manno-octul 99.7 7.5E-17 1.6E-21 153.3 13.4 136 91-268 38-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.7 3.8E-16 8.3E-21 137.3 9.6 132 88-268 2-138 (155)
436 KOG0601 Cyclin-dependent kinas 99.6 3.5E-15 7.5E-20 151.9 8.0 260 84-468 114-386 (524)
437 TIGR01982 UbiB 2-polyprenylphe 99.5 8.1E-14 1.7E-18 143.9 12.2 142 90-270 123-308 (437)
438 PRK04750 ubiB putative ubiquin 99.5 6.6E-14 1.4E-18 146.1 8.0 148 84-270 120-315 (537)
439 cd05151 ChoK Choline Kinase (C 99.5 2.9E-13 6.3E-18 121.9 10.4 128 89-268 3-136 (170)
440 KOG1266 Protein kinase [Signal 99.4 1.5E-13 3.3E-18 129.3 5.8 211 142-468 120-338 (458)
441 KOG0601 Cyclin-dependent kinas 99.4 1E-13 2.2E-18 141.2 5.0 252 81-464 262-517 (524)
442 KOG1243 Protein kinase [Genera 99.4 2.2E-12 4.8E-17 132.8 12.1 116 113-266 36-152 (690)
443 cd05146 RIO3_euk RIO kinase fa 99.3 1.5E-11 3.3E-16 111.9 12.1 144 90-269 3-174 (197)
444 COG3642 Mn2+-dependent serine/ 99.3 2.8E-11 6E-16 106.4 13.0 134 90-268 2-140 (204)
445 KOG3087 Serine/threonine prote 99.2 1.1E-10 2.4E-15 102.1 12.1 145 88-267 11-164 (229)
446 cd05154 ACAD10_11_like Acyl-Co 99.1 2.5E-10 5.4E-15 107.4 9.4 83 90-180 4-91 (223)
447 KOG2137 Protein kinase [Signal 99.1 6.6E-11 1.4E-15 122.5 3.0 174 226-477 106-281 (700)
448 PRK15123 lipopolysaccharide co 99.0 4.2E-09 9.2E-14 101.3 13.3 104 136-267 75-193 (268)
449 PF01163 RIO1: RIO1 family; I 99.0 5.3E-09 1.2E-13 94.9 11.5 128 99-269 1-156 (188)
450 KOG3741 Poly(A) ribonuclease s 98.8 6E-08 1.3E-12 97.5 13.9 146 98-266 290-440 (655)
451 COG0478 RIO-like serine/threon 98.8 4.8E-08 1E-12 91.3 10.6 136 86-266 93-249 (304)
452 PF06293 Kdo: Lipopolysacchari 98.8 1.3E-07 2.9E-12 87.9 13.3 126 113-268 31-170 (206)
453 PF06176 WaaY: Lipopolysacchar 98.7 1.6E-07 3.5E-12 86.1 13.0 140 81-266 28-181 (229)
454 COG4248 Uncharacterized protei 98.7 1.7E-07 3.6E-12 92.1 11.8 149 223-452 121-291 (637)
455 KOG0576 Mitogen-activated prot 98.6 1.6E-08 3.6E-13 103.9 1.9 286 85-508 243-533 (829)
456 PRK09902 hypothetical protein; 98.5 6.8E-07 1.5E-11 81.8 10.3 140 92-267 26-178 (216)
457 COG0661 AarF Predicted unusual 98.4 1.4E-06 3.1E-11 90.9 11.5 143 90-270 131-316 (517)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 1E-06 2.2E-11 83.1 9.4 72 90-175 7-80 (226)
459 PF13095 FTA2: Kinetochore Sim 98.4 4.9E-06 1.1E-10 75.5 11.7 128 84-266 37-206 (207)
460 COG1718 RIO1 Serine/threonine 98.3 6.4E-06 1.4E-10 76.5 12.1 140 90-270 54-217 (268)
461 PF01636 APH: Phosphotransfera 98.3 1E-05 2.2E-10 76.4 13.3 78 89-178 2-84 (239)
462 cd05150 APH Aminoglycoside 3'- 98.3 6E-06 1.3E-10 79.0 10.9 76 91-179 5-82 (244)
463 KOG1035 eIF-2alpha kinase GCN2 98.2 5.8E-06 1.3E-10 91.0 10.0 204 134-468 227-441 (1351)
464 COG2112 Predicted Ser/Thr prot 98.1 1.4E-05 3.1E-10 70.2 8.5 129 86-267 24-154 (201)
465 cd05155 APH_ChoK_like_1 Unchar 98.0 4.2E-05 9.1E-10 72.7 10.8 75 89-178 2-83 (235)
466 TIGR00938 thrB_alt homoserine 97.9 0.00019 4.2E-09 71.1 13.8 164 82-266 20-215 (307)
467 cd05157 ETNK_euk Ethanolamine 97.9 0.00011 2.4E-09 69.7 11.1 77 89-177 3-80 (235)
468 KOG1235 Predicted unusual prot 97.9 8.6E-05 1.9E-09 77.5 11.0 139 90-270 167-356 (538)
469 PLN02876 acyl-CoA dehydrogenas 97.9 0.00015 3.3E-09 81.5 13.4 84 88-176 42-131 (822)
470 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00019 4E-09 65.9 11.1 131 89-262 6-165 (199)
471 PRK09550 mtnK methylthioribose 97.8 0.00042 9.2E-09 70.4 14.5 82 87-175 29-117 (401)
472 cd05153 HomoserineK_II Homoser 97.7 0.00036 7.7E-09 68.8 12.4 161 84-266 14-203 (296)
473 TIGR02721 ycfN_thiK thiamine k 97.7 0.00015 3.3E-09 69.8 8.6 72 92-177 4-76 (256)
474 cd05156 ChoK_euk Choline Kinas 97.7 0.00027 5.9E-09 69.9 10.3 82 89-178 3-86 (302)
475 KOG1826 Ras GTPase activating 97.6 1E-05 2.2E-10 91.0 -1.1 205 83-398 1228-1441(2724)
476 KOG2268 Serine/threonine prote 97.6 0.00012 2.5E-09 70.6 6.0 135 86-266 94-249 (465)
477 PRK10593 hypothetical protein; 97.6 0.00061 1.3E-08 67.1 11.4 80 85-176 15-100 (297)
478 PF12260 PIP49_C: Protein-kina 97.5 0.00041 8.9E-09 63.2 8.4 97 139-267 9-110 (188)
479 PRK05231 homoserine kinase; Pr 97.5 0.0017 3.7E-08 64.7 13.0 29 238-266 187-215 (319)
480 PLN02236 choline kinase 97.4 0.0042 9.2E-08 62.5 14.5 83 86-177 38-121 (344)
481 TIGR02906 spore_CotS spore coa 97.2 0.0071 1.5E-07 59.9 14.2 28 238-266 187-214 (313)
482 cd05152 MPH2' Macrolide 2'-Pho 97.0 0.01 2.3E-07 57.7 12.4 29 239-267 186-215 (276)
483 TIGR01767 MTRK 5-methylthiorib 96.9 0.005 1.1E-07 61.4 9.7 83 91-180 2-92 (370)
484 KOG1093 Predicted protein kina 96.9 0.00084 1.8E-08 68.5 4.0 88 376-467 110-200 (725)
485 PLN02421 phosphotransferase, a 96.9 0.0066 1.4E-07 60.8 10.4 82 84-176 15-97 (330)
486 PLN02756 S-methyl-5-thioribose 96.7 0.012 2.6E-07 59.8 10.9 77 88-173 36-119 (418)
487 PF03881 Fructosamin_kin: Fruc 96.4 0.05 1.1E-06 53.1 12.1 76 86-174 19-97 (288)
488 PF01633 Choline_kinase: Choli 96.3 0.015 3.2E-07 54.2 8.1 29 239-267 144-173 (211)
489 PTZ00384 choline kinase; Provi 96.3 0.03 6.4E-07 57.1 10.6 86 83-177 50-137 (383)
490 PRK12396 5-methylribose kinase 96.1 0.01 2.2E-07 59.9 5.9 79 88-173 33-117 (409)
491 TIGR02904 spore_ysxE spore coa 96.0 0.094 2E-06 52.0 12.3 29 239-267 197-225 (309)
492 COG3173 Predicted aminoglycosi 95.9 0.063 1.4E-06 52.9 10.3 38 231-268 183-228 (321)
493 COG2334 Putative homoserine ki 95.9 0.073 1.6E-06 52.9 10.7 42 225-266 174-226 (331)
494 KOG2270 Serine/threonine prote 95.8 0.067 1.4E-06 53.0 9.7 143 87-268 147-313 (520)
495 PTZ00296 choline kinase; Provi 95.3 0.18 4E-06 52.4 11.6 86 83-177 105-194 (442)
496 PRK06148 hypothetical protein; 95.3 0.16 3.5E-06 58.5 12.2 30 238-267 203-235 (1013)
497 PF02958 EcKinase: Ecdysteroid 95.1 0.13 2.9E-06 50.4 9.7 80 93-172 2-99 (294)
498 COG3001 Uncharacterized protei 95.1 0.29 6.3E-06 45.5 10.7 80 85-177 17-99 (286)
499 PRK11768 serine/threonine prot 95.0 0.3 6.5E-06 48.8 11.8 27 238-266 196-222 (325)
500 COG5072 ALK1 Serine/threonine 94.4 0.08 1.7E-06 52.4 5.8 43 225-268 327-370 (488)
No 1
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-68 Score=505.78 Aligned_cols=369 Identities=62% Similarity=1.077 Sum_probs=306.3
Q ss_pred cCCCCCCccHHHHHHHHHHH-hhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHh
Q 010140 56 NSHKPHKANQAAWEAMKRLR-RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH 134 (517)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~ 134 (517)
...++|..+...|+++..++ .....+.+++|++++.||.|.-|+||+|+.++ +++.+|+|++.++.+..++++.
T Consensus 48 ~~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~-----t~~~fAmKVmdK~~l~~rkKl~ 122 (459)
T KOG0610|consen 48 SGNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRG-----TNCLFAMKVMDKESLASRKKLK 122 (459)
T ss_pred ccCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecC-----CCceEEEEEecHHHHhhhhHHH
Confidence 34567777777888877766 46678899999999999999999999999998 6799999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCcccccc
Q 010140 135 RADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTD 214 (517)
Q Consensus 135 ~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 214 (517)
+++.|.+||+.++||.++.||..|+.+++.|||||||+||||..++++++.+.+++..++
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aR-------------------- 182 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAAR-------------------- 182 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHH--------------------
Confidence 999999999999999999999999999999999999999999999999999988887765
Q ss_pred chhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCC
Q 010140 215 VTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIP 294 (517)
Q Consensus 215 ~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (517)
+|+++++.||+|||-.|||.||||||||||.++|+|.|+||.|+..+...+......... .....+
T Consensus 183 --------FYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~------~~~~~~ 248 (459)
T KOG0610|consen 183 --------FYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPR------SSGSQP 248 (459)
T ss_pred --------HHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCC------CCCCCc
Confidence 899999999999999999999999999999999999999999998886655554321100 001123
Q ss_pred CCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC
Q 010140 295 SCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH 374 (517)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~ 374 (517)
+|.. .-.+|+.+.......+++..... .. ...++..+++.+.+..+++||-.|+|||++.|.++
T Consensus 249 ~~~~---~~~s~f~~r~~~~~~~~~k~~~~-----------~~--~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 249 SCRS---RQPSCFSPRCLSSSKKRKKKDES-----------AS--RSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred cccc---ccccccccchhcccccccccccc-----------cc--ccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 3332 11233333322221111110000 00 12233456778889999999999999999999999
Q ss_pred CccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCC
Q 010140 375 GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454 (517)
Q Consensus 375 ~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~ 454 (517)
+.++|+|+|||++|||+.|.+||.|.+..+.+.+|+..+..+|...... ..++|||+++|.+||.+|++...+
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs-------~~akDLIr~LLvKdP~kRlg~~rG 385 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVS-------SAAKDLIRKLLVKDPSKRLGSKRG 385 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcch-------hHHHHHHHHHhccChhhhhccccc
Confidence 9999999999999999999999999999999999999999998765222 358999999999999999998888
Q ss_pred hHHhhcCCCcCCCCcccccCCCCCCCCCCccc
Q 010140 455 SVEIKRHEFFKGINWALIRSIKPPEVPNNDLY 486 (517)
Q Consensus 455 ~~ell~hp~f~~~~~~~~~~~~p~~~~~~~~~ 486 (517)
+.||++||||++++|+.|+...||++|.....
T Consensus 386 A~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~ 417 (459)
T KOG0610|consen 386 AAEIKRHPFFEGVNWALIRCARPPEIPKPVDG 417 (459)
T ss_pred hHHhhcCccccCCChhheeccCCCcCCCcccc
Confidence 89999999999999999999999999886443
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.8e-65 Score=502.57 Aligned_cols=349 Identities=35% Similarity=0.630 Sum_probs=269.8
Q ss_pred HHHhhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCcc
Q 010140 73 RLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLP 152 (517)
Q Consensus 73 ~~~~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv 152 (517)
.++.+..++..++|++++.||+|+||.||+|+.+. ++..||+|++++..+....++..+..|..||...++|+||
T Consensus 130 ~lR~~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~-----Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vV 204 (550)
T KOG0605|consen 130 YLRLRRTRLSLDDFELLKVIGKGAFGEVRLARKKD-----TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVV 204 (550)
T ss_pred HHHhccccCCcccchhheeeccccceeEEEEEEcc-----CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEE
Confidence 45667778999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred ceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH
Q 010140 153 TLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL 232 (517)
Q Consensus 153 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 232 (517)
+||..|++..++||||||++|||+..+|.+. ..+++.. .|+|+.+++.|+
T Consensus 205 KLyYsFQD~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~----------------------------arfYiaE~vlAI 254 (550)
T KOG0605|consen 205 KLYYSFQDKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDW----------------------------ARFYIAETVLAI 254 (550)
T ss_pred EEEEEecCCCeeEEEEEecCCccHHHHHHhc--CcCchHH----------------------------HHHHHHHHHHHH
Confidence 9999999999999999999999999998765 3333333 358999999999
Q ss_pred HHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccc
Q 010140 233 EYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSH 312 (517)
Q Consensus 233 ~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (517)
+-||+.|+|||||||+|+|||..|++||+|||||..+....... .+. ....++..++....
T Consensus 255 ~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~----------~~~------~~~~~~~~~~~~~~--- 315 (550)
T KOG0605|consen 255 ESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE----------SYR------LDEQMQINLSEAKP--- 315 (550)
T ss_pred HHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh----------hhc------chhhhhhhhccCCC---
Confidence 99999999999999999999999999999999995443211100 000 00000000000000
Q ss_pred ccccccccccccccccccCCCCCCccccCCcccc---ccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHH
Q 010140 313 GKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV---AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYE 389 (517)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~e 389 (517)
...... .......+..... .........+.+|||.|||||++.+.+|+..+|+|||||||||
T Consensus 316 --------~~~~~~-------~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyE 380 (550)
T KOG0605|consen 316 --------SDFPKF-------NTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYE 380 (550)
T ss_pred --------cccccc-------ccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHH
Confidence 000000 0000000000000 0111122346799999999999999999999999999999999
Q ss_pred HhhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 390 MLYGTTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 390 lltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
||.|.+||.+.++.+.+.+|+... +.+|.....+ .+++|||.+||. ||++|++ ..+++||++||||+++
T Consensus 381 mLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s-------~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 381 MLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLS-------DEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCccc-------HHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccC
Confidence 999999999999999999999765 5666554443 358999999999 9999999 4789999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccccccCCCCccc
Q 010140 468 NWALIRSIKPPEVPNNDLYCKIKKKVYVPKLSKQE 502 (517)
Q Consensus 468 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (517)
+|+.|+...||++|... .+....+..++...+
T Consensus 452 ~W~~l~~~~apfvP~v~---~~~DT~yFddF~e~~ 483 (550)
T KOG0605|consen 452 DWDHLREMPAPFVPQVN---SELDTQYFDDFPEED 483 (550)
T ss_pred CcchhhcCCCCCCCCCC---CcccccccccCcccc
Confidence 99999999999998743 334444555555443
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-64 Score=479.24 Aligned_cols=282 Identities=43% Similarity=0.784 Sum_probs=250.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...++|+++++||+|+||+||+++.++ +++.||+|++++......+...+...|..||..++||+||+++..|++
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~d-----t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt 96 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKD-----TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT 96 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcc-----cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc
Confidence 456899999999999999999999997 889999999999988888888999999999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+.+|||+||+.||+|+..|++. ..+.+..+ |+|+.+|+.||.|||++||
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~e--g~F~E~~a----------------------------rfYlaEi~lAL~~LH~~gI 146 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQRE--GRFSEDRA----------------------------RFYLAEIVLALGYLHSKGI 146 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhc--CCcchhHH----------------------------HHHHHHHHHHHHHHHhCCe
Confidence 99999999999999999999875 44554444 4889999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
||||||||||||+.+|+++|+|||+|+....
T Consensus 147 iyRDlKPENILLd~~GHi~LtDFgL~k~~~~------------------------------------------------- 177 (357)
T KOG0598|consen 147 IYRDLKPENILLDEQGHIKLTDFGLCKEDLK------------------------------------------------- 177 (357)
T ss_pred eeccCCHHHeeecCCCcEEEeccccchhccc-------------------------------------------------
Confidence 9999999999999999999999999843110
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
.+....++|||+.|||||++.+.+|+..+|+|||||++|||++|.+||.+.
T Consensus 178 -----------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 178 -----------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred -----------------------------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 122345689999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc--cCCCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPP 478 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~--~~~~p~ 478 (517)
+....+.+|..+....+..... .++++||.++|..||++|+++...+.++.+||||++++|+.+ +.+.||
T Consensus 229 ~~~~~~~~I~~~k~~~~p~~ls--------~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~Pp 300 (357)
T KOG0598|consen 229 DVKKMYDKILKGKLPLPPGYLS--------EEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPP 300 (357)
T ss_pred cHHHHHHHHhcCcCCCCCccCC--------HHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCC
Confidence 9999999999988444433211 148999999999999999987777889999999999999966 778899
Q ss_pred CCCCC
Q 010140 479 EVPNN 483 (517)
Q Consensus 479 ~~~~~ 483 (517)
+.|+.
T Consensus 301 F~P~~ 305 (357)
T KOG0598|consen 301 FKPNV 305 (357)
T ss_pred eecCC
Confidence 88874
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-63 Score=451.43 Aligned_cols=276 Identities=43% Similarity=0.805 Sum_probs=254.4
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
..+++|++++.||.|+||.|.+++.+. ++..||+|++.+......++.++...|..+|+.+.||++++|++.|.+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~-----~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKH-----SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEcc-----CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence 778999999999999999999999998 789999999999999888899999999999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+++||||||++||.|..++++. ++++++.++ +|++||+.||+|||+++|
T Consensus 116 ~~~lymvmeyv~GGElFS~Lrk~--~rF~e~~ar----------------------------FYAAeivlAleylH~~~i 165 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLRKS--GRFSEPHAR----------------------------FYAAEIVLALEYLHSLDI 165 (355)
T ss_pred CCeEEEEEeccCCccHHHHHHhc--CCCCchhHH----------------------------HHHHHHHHHHHHHHhcCe
Confidence 99999999999999999999875 566665554 899999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
++|||||||||||.+|++||+|||+|+...
T Consensus 166 iYRDLKPENiLlD~~G~iKitDFGFAK~v~-------------------------------------------------- 195 (355)
T KOG0616|consen 166 IYRDLKPENLLLDQNGHIKITDFGFAKRVS-------------------------------------------------- 195 (355)
T ss_pred eeccCChHHeeeccCCcEEEEeccceEEec--------------------------------------------------
Confidence 999999999999999999999999996533
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
.++-+.||||.|+|||++...+|+.++|+|||||++|||+.|.+||.+.
T Consensus 196 -------------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 196 -------------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred -------------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 2345779999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCcccc--cCCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKP 477 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~--~~~~p 477 (517)
+...++.+|+.+...+|..... +++|||.++|+.|-.+|.+..+ +..+|++||||++++|..+ +.+.|
T Consensus 245 ~~~~iY~KI~~~~v~fP~~fs~---------~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~ 315 (355)
T KOG0616|consen 245 NPIQIYEKILEGKVKFPSYFSS---------DAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEP 315 (355)
T ss_pred ChHHHHHHHHhCcccCCcccCH---------HHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccC
Confidence 9999999999999999976554 4899999999999999977654 7789999999999999977 67889
Q ss_pred CCCC
Q 010140 478 PEVP 481 (517)
Q Consensus 478 ~~~~ 481 (517)
|++|
T Consensus 316 P~~p 319 (355)
T KOG0616|consen 316 PFEP 319 (355)
T ss_pred CCCC
Confidence 9888
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-62 Score=482.15 Aligned_cols=288 Identities=37% Similarity=0.603 Sum_probs=252.9
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 158 (517)
.....+|.+++.||.|+|++|++|+.+. +++.|||||+.+..+...++...+.+|..+|.+| +||.|++||..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~-----t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKA-----TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecC-----CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence 5667899999999999999999999998 7899999999999998888899999999999999 899999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
+++..+|+|+||+++|+|.++|.+. +.+.+ ...|+|++||+.||+|||++
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~--Gsfde----------------------------~caR~YAAeIldAleylH~~ 193 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKY--GSFDE----------------------------TCARFYAAEILDALEYLHSN 193 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHh--CcchH----------------------------HHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999886 33333 23368999999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||||||||||||||+.+|++||+|||.|+.++........ |
T Consensus 194 GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~-----------------~---------------------- 234 (604)
T KOG0592|consen 194 GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQEN-----------------P---------------------- 234 (604)
T ss_pred CceeccCChhheeEcCCCcEEEeeccccccCChhhccccC-----------------c----------------------
Confidence 9999999999999999999999999999776532211000 0
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........+..+++||..|.+||+|.....++.+|||+||||||+|+.|.+||.
T Consensus 235 --------------------------~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr 288 (604)
T KOG0592|consen 235 --------------------------VDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR 288 (604)
T ss_pred --------------------------cCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence 000011222467999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPP 478 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~ 478 (517)
+.++..++++|+...+.||..... .++|||.++|..||.+|+|+. ||++||||.++||+.+..+.||
T Consensus 289 a~NeyliFqkI~~l~y~fp~~fp~---------~a~dLv~KLLv~dp~~Rlt~~----qIk~HpFF~~Vdw~nlw~~~PP 355 (604)
T KOG0592|consen 289 AANEYLIFQKIQALDYEFPEGFPE---------DARDLIKKLLVRDPSDRLTSQ----QIKAHPFFEGVDWENLWQQTPP 355 (604)
T ss_pred cccHHHHHHHHHHhcccCCCCCCH---------HHHHHHHHHHccCccccccHH----HHhhCcccccCChhhhhhcCCC
Confidence 999999999999999998875542 489999999999999999997 9999999999999999999888
Q ss_pred CC
Q 010140 479 EV 480 (517)
Q Consensus 479 ~~ 480 (517)
.+
T Consensus 356 ~l 357 (604)
T KOG0592|consen 356 KL 357 (604)
T ss_pred cc
Confidence 65
No 6
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-59 Score=475.14 Aligned_cols=282 Identities=41% Similarity=0.760 Sum_probs=251.2
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~ 157 (517)
..+.+++|.++++||+|+||+|+++..+. +++.||||+++++....++.++....|.+|+.... ||.++.|+.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~-----~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~ 437 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKG-----TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC 437 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcC-----CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc
Confidence 56889999999999999999999999998 78899999999998888888999999999999885 9999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
|+..+++|+||||+.|||+..+.+. ..+.+. ..++|++.|+.||+|||+
T Consensus 438 fQT~~~l~fvmey~~Ggdm~~~~~~---~~F~e~----------------------------rarfyaAev~l~L~fLH~ 486 (694)
T KOG0694|consen 438 FQTKEHLFFVMEYVAGGDLMHHIHT---DVFSEP----------------------------RARFYAAEVVLGLQFLHE 486 (694)
T ss_pred cccCCeEEEEEEecCCCcEEEEEec---ccccHH----------------------------HHHHHHHHHHHHHHHHHh
Confidence 9999999999999999996443322 334333 345899999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+|||+||||.+|||+|.+|++||+|||+++.-.
T Consensus 487 ~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m----------------------------------------------- 519 (694)
T KOG0694|consen 487 NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM----------------------------------------------- 519 (694)
T ss_pred cCceeeecchhheEEcccCcEEecccccccccC-----------------------------------------------
Confidence 999999999999999999999999999984311
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
..+.+++++||||.|||||++.+..|+.++|+|||||+||||+.|..||
T Consensus 520 -------------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF 568 (694)
T KOG0694|consen 520 -------------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF 568 (694)
T ss_pred -------------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence 1234678899999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc--cC
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RS 474 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~--~~ 474 (517)
.|+++++++..|+.....+|..... ++.++|++||.+||++|+++. ..+.+|++||||++|+|+.+ +.
T Consensus 569 ~gddEee~FdsI~~d~~~yP~~ls~---------ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~ 639 (694)
T KOG0694|consen 569 PGDDEEEVFDSIVNDEVRYPRFLSK---------EAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRR 639 (694)
T ss_pred CCCCHHHHHHHHhcCCCCCCCcccH---------HHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhcc
Confidence 9999999999999999988875533 589999999999999999983 34579999999999999977 77
Q ss_pred CCCCCCCCC
Q 010140 475 IKPPEVPNN 483 (517)
Q Consensus 475 ~~p~~~~~~ 483 (517)
+.||+.|..
T Consensus 640 i~PPf~P~i 648 (694)
T KOG0694|consen 640 IKPPFVPTI 648 (694)
T ss_pred CCCCCCccc
Confidence 999999874
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-60 Score=455.46 Aligned_cols=277 Identities=29% Similarity=0.437 Sum_probs=228.8
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH----HHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----RKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
..+.|.+.+.||+|+||.|-+|..+. +++.||||++.+..... ......+.+|++||++|+|||||+++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~-----tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~ 244 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKK-----TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF 244 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcc-----cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee
Confidence 34679999999999999999999998 88999999998876543 2234556789999999999999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
|+..+..||||||++||+|.+.+-.+. .+.+... +.+++||+.||.|||+
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~----------------------------K~~f~Qll~avkYLH~ 294 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLG----------------------------KLLFKQLLTAVKYLHS 294 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhcc--ccccchh----------------------------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999987763 3333333 3567999999999999
Q ss_pred cCceeccCCCCceEEccC---CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 238 MGIVYRDLKPENVLVRED---GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~---~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
+||+||||||+|||+..+ -.+||+|||+|+...
T Consensus 295 ~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-------------------------------------------- 330 (475)
T KOG0615|consen 295 QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-------------------------------------------- 330 (475)
T ss_pred cCcccccCCcceEEeccCCcceEEEecccchhhccc--------------------------------------------
Confidence 999999999999999866 689999999995432
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC---CccchHHHHHHHHHHHh
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH---GSAVDWWTLGVFLYEML 391 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~---~~~~DiWSlGvil~ell 391 (517)
......++||||.|.|||++.+..+ ..++|||||||+||-++
T Consensus 331 -----------------------------------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcL 375 (475)
T KOG0615|consen 331 -----------------------------------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCL 375 (475)
T ss_pred -----------------------------------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEe
Confidence 1234567899999999999987753 45889999999999999
Q ss_pred hCCCCCCCCChHH-HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcc
Q 010140 392 YGTTPFKGENNEK-TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 392 tG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
+|.+||.+..... +..+|.++.+.+-... +.+...+.++||.+||..||++||++. |+|+||||+.++..
T Consensus 376 sG~pPFS~~~~~~sl~eQI~~G~y~f~p~~-----w~~Iseea~dlI~~mL~VdP~~R~s~~----eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 376 SGYPPFSEEYTDPSLKEQILKGRYAFGPLQ-----WDRISEEALDLINWMLVVDPENRPSAD----EALNHPWFKDAPCL 446 (475)
T ss_pred ccCCCcccccCCccHHHHHhcCcccccChh-----hhhhhHHHHHHHHHhhEeCcccCcCHH----HHhcChhhhccccc
Confidence 9999999877655 7888888887765332 234455799999999999999999998 99999999987643
Q ss_pred c----ccCCCCCCCC
Q 010140 471 L----IRSIKPPEVP 481 (517)
Q Consensus 471 ~----~~~~~p~~~~ 481 (517)
. +..+.|+...
T Consensus 447 s~~~~l~~~~~l~~~ 461 (475)
T KOG0615|consen 447 SKQDILKKLQPLSIE 461 (475)
T ss_pred chHHHHhhcCccccc
Confidence 2 2444454443
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-58 Score=460.40 Aligned_cols=256 Identities=32% Similarity=0.518 Sum_probs=233.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
.+|...+.||+|||+.||.+++.. ++..||+|++.+..+......+.+.+|++|.+.|+|||||+++++|++.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~-----tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLD-----TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcC-----CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence 469999999999999999999977 789999999999888888888899999999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|||+|+|+.++|..++++. +.+.+.+++ +|++||+.||.|||+++||||
T Consensus 93 VYivLELC~~~sL~el~Krr--k~ltEpEar----------------------------y~l~QIv~GlkYLH~~~IiHR 142 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRR--KPLTEPEAR----------------------------YFLRQIVEGLKYLHSLGIIHR 142 (592)
T ss_pred eEEEEEecCCccHHHHHHhc--CCCCcHHHH----------------------------HHHHHHHHHHHHHHhcCceec
Confidence 99999999999999998854 556665554 889999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
|||..|+||+++.+|||+|||||..+..
T Consensus 143 DLKLGNlfL~~~~~VKIgDFGLAt~le~---------------------------------------------------- 170 (592)
T KOG0575|consen 143 DLKLGNLFLNENMNVKIGDFGLATQLEY---------------------------------------------------- 170 (592)
T ss_pred ccchhheeecCcCcEEecccceeeeecC----------------------------------------------------
Confidence 9999999999999999999999954432
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
...+..+.||||.|.|||++....++..+||||+||+||.||+|++||...+..
T Consensus 171 --------------------------~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk 224 (592)
T KOG0575|consen 171 --------------------------DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK 224 (592)
T ss_pred --------------------------cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH
Confidence 124566889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
+.+.+|....+.+|.... .+++|||.+||+.||.+||++. ++|.|+||+
T Consensus 225 ety~~Ik~~~Y~~P~~ls---------~~A~dLI~~lL~~~P~~Rpsl~----~vL~h~Ff~ 273 (592)
T KOG0575|consen 225 ETYNKIKLNEYSMPSHLS---------AEAKDLIRKLLRPNPSERPSLD----EVLDHPFFK 273 (592)
T ss_pred HHHHHHHhcCcccccccC---------HHHHHHHHHHhcCCcccCCCHH----HHhcCHhhh
Confidence 999999999999887332 2489999999999999999998 999999993
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-56 Score=423.18 Aligned_cols=260 Identities=30% Similarity=0.436 Sum_probs=220.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++.+.++.||+|..|+||+|+++. +++.+|+|++..+. .....+++.+|+++++.++||+||++|+.|.+
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~-----t~~i~AlK~I~~~~--~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKP-----TGKIYALKVILLNI--DPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcC-----CCeEEEEEeecccC--CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 556788999999999999999999998 78999999994331 23455678889999999999999999999999
Q ss_pred Cce-eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-c
Q 010140 161 SHY-SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-M 238 (517)
Q Consensus 161 ~~~-~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~ 238 (517)
++. .+|+||||.||+|..++... +++++... ..++.+|++||.|||+ +
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L----------------------------~~ia~~VL~GL~YLh~~~ 198 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRV--GRIPEPVL----------------------------GKIARAVLRGLSYLHEER 198 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhc--CCCCHHHH----------------------------HHHHHHHHHHHHHHhhcc
Confidence 884 99999999999999988764 33333322 3788999999999995 9
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
+||||||||+||||+..|.|||||||.|+.+.
T Consensus 199 ~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv------------------------------------------------ 230 (364)
T KOG0581|consen 199 KIIHRDIKPSNLLVNSKGEVKICDFGVSGILV------------------------------------------------ 230 (364)
T ss_pred CeeeccCCHHHeeeccCCCEEeccccccHHhh------------------------------------------------
Confidence 99999999999999999999999999984332
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
+....+++||..|||||.+.+..|+.++||||||+.++||++|++||.
T Consensus 231 --------------------------------nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~ 278 (364)
T KOG0581|consen 231 --------------------------------NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYP 278 (364)
T ss_pred --------------------------------hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCC
Confidence 224567899999999999999999999999999999999999999998
Q ss_pred CC-----ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 399 GE-----NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 399 ~~-----~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
.. ...+++..|+.++.+..+.. ..++++++||..||++||.+|+++. |+++|||++...
T Consensus 279 ~~~~~~~~~~~Ll~~Iv~~ppP~lP~~-------~fS~ef~~FV~~CL~Kdp~~R~s~~----qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 279 PPNPPYLDIFELLCAIVDEPPPRLPEG-------EFSPEFRSFVSCCLRKDPSERPSAK----QLLQHPFIKKFE 342 (364)
T ss_pred CcCCCCCCHHHHHHHHhcCCCCCCCcc-------cCCHHHHHHHHHHhcCCcccCCCHH----HHhcCHHHhhcc
Confidence 75 55788888888654332222 1233599999999999999999998 999999998643
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5e-56 Score=424.15 Aligned_cols=261 Identities=31% Similarity=0.506 Sum_probs=223.5
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|.+.++||+|+||+||+|+++. ++..||||.+.+..+. .+..+.+..|+.||+.++|||||.|++++..+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~-----~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKK-----SGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDD 81 (429)
T ss_pred ccccceehhhccCcceEEEEEeEecc-----CCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecC
Confidence 35789999999999999999999998 6689999999887653 45567778899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+++|||||||.||||..++++.. ++++..+ |.++.||+.||++||+++||
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~----------------------------r~Fm~QLA~alq~L~~~~Ii 131 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRG--RLPEATA----------------------------RHFMQQLASALQFLHENNII 131 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCee
Confidence 99999999999999999998863 4444333 47889999999999999999
Q ss_pred eccCCCCceEEccC------CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 242 YRDLKPENVLVRED------GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 242 HrDLKp~NILl~~~------~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
||||||+||||+.. -.+||+|||+|+.+..
T Consensus 132 HRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~-------------------------------------------- 167 (429)
T KOG0595|consen 132 HRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP-------------------------------------------- 167 (429)
T ss_pred eccCCcceEEeccCCCCCCCceEEecccchhhhCCc--------------------------------------------
Confidence 99999999999864 4689999999976542
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~ 395 (517)
.....+.||+|.|||||++..+.|+.|+|+||+|+|+|+|++|++
T Consensus 168 -----------------------------------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~ 212 (429)
T KOG0595|consen 168 -----------------------------------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKP 212 (429)
T ss_pred -----------------------------------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCC
Confidence 122356799999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
||...+..+++..+.++....|........ .+.+|+..+|..+|..|.+.. +-+.|++...-
T Consensus 213 Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~------~~~~Ll~~ll~~~~~~~~~~~----~~~~~~~l~~~ 274 (429)
T KOG0595|consen 213 PFDAETPKELLLYIKKGNEIVPVLPAELSN------PLRELLISLLQRNPKDRISFE----DFFDHPFLAAN 274 (429)
T ss_pred CccccCHHHHHHHHhccccccCchhhhccC------chhhhhhHHHhcCccccCchH----HhhhhhhcccC
Confidence 999999999999888776555543332222 367999999999999999987 88888887653
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.7e-55 Score=401.90 Aligned_cols=279 Identities=26% Similarity=0.394 Sum_probs=218.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
+.|+.+.++|+|+||+||+|++++ +++.||||.+..... .....+-..+|+++|++|+|||+|.|+++|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~-----TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKD-----TGQIVAIKKFVESED-DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCC-----cccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce
Confidence 579999999999999999999998 899999999864322 12233445679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
++||+|||+. ++.+.+++.+ ...+... ++.|+.|++.|+.|+|+++||||
T Consensus 76 lhLVFE~~dh-TvL~eLe~~p-~G~~~~~----------------------------vk~~l~Q~l~ai~~cHk~n~IHR 125 (396)
T KOG0593|consen 76 LHLVFEYCDH-TVLHELERYP-NGVPSEL----------------------------VKKYLYQLLKAIHFCHKNNCIHR 125 (396)
T ss_pred eEEEeeecch-HHHHHHHhcc-CCCCHHH----------------------------HHHHHHHHHHHhhhhhhcCeecc
Confidence 9999999955 6666676654 2233222 24789999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
|||||||||+.+|.+||||||+|+.+...
T Consensus 126 DIKPENILit~~gvvKLCDFGFAR~L~~p--------------------------------------------------- 154 (396)
T KOG0593|consen 126 DIKPENILITQNGVVKLCDFGFARTLSAP--------------------------------------------------- 154 (396)
T ss_pred cCChhheEEecCCcEEeccchhhHhhcCC---------------------------------------------------
Confidence 99999999999999999999999654321
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
+...+.++.|++|+|||.+.| ..|+..+||||+||++.||++|.+.|+|.++
T Consensus 155 ---------------------------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD 207 (396)
T KOG0593|consen 155 ---------------------------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD 207 (396)
T ss_pred ---------------------------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch
Confidence 123456789999999999998 5699999999999999999999999999999
Q ss_pred HHHHHHHhcCC-------------------CCCCCCCCCCchh---HHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 403 EKTLINILKKP-------------------LTFPRIGVSSSKE---FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 403 ~~~~~~i~~~~-------------------~~~p~~~~~~~~~---~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.+.+..|.... ..+|......+-+ .....-+.||+.+||..||.+|++.+ |+|.
T Consensus 208 iDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~----qll~ 283 (396)
T KOG0593|consen 208 IDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCE----QLLH 283 (396)
T ss_pred HHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHH----HHhc
Confidence 88877775411 1222222221111 12223578999999999999999998 9999
Q ss_pred CCCcCCCCcccccCCCCCCC
Q 010140 461 HEFFKGINWALIRSIKPPEV 480 (517)
Q Consensus 461 hp~f~~~~~~~~~~~~p~~~ 480 (517)
||||.+.--..+..-.+...
T Consensus 284 H~yFd~~~er~~~~k~~~~~ 303 (396)
T KOG0593|consen 284 HPYFDGFIERELKAKKPNEA 303 (396)
T ss_pred ChHHHHHHHHHHHHhcccch
Confidence 99997643333333333333
No 12
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-55 Score=402.68 Aligned_cols=282 Identities=40% Similarity=0.735 Sum_probs=250.1
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
.++.+++|..+++||+|.||.|-+|+.+. +++.||||+++++....+..+.+-..|-++|+..+||.+..|...|
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKa-----t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF 237 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKA-----TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF 237 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecc-----cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh
Confidence 45678999999999999999999999887 7899999999999887778888888899999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
+..+++|+||||+.||.|+-.+.+. ..+.+. ..|+|..+|+.||.|||++
T Consensus 238 Qt~drlCFVMeyanGGeLf~HLsre--r~FsE~----------------------------RtRFYGaEIvsAL~YLHs~ 287 (516)
T KOG0690|consen 238 QTQDRLCFVMEYANGGELFFHLSRE--RVFSED----------------------------RTRFYGAEIVSALGYLHSR 287 (516)
T ss_pred ccCceEEEEEEEccCceEeeehhhh--hcccch----------------------------hhhhhhHHHHHHhhhhhhC
Confidence 9999999999999999998776653 233333 3368999999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
+||.||||.+|+|+|.+|++||+|||+++.-.
T Consensus 288 ~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I------------------------------------------------ 319 (516)
T KOG0690|consen 288 NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI------------------------------------------------ 319 (516)
T ss_pred CeeeeechhhhheeccCCceEeeecccchhcc------------------------------------------------
Confidence 99999999999999999999999999984211
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.......++||||.|+|||++....|+.++|+|.+||+||||++|+.||.
T Consensus 320 ------------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 320 ------------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred ------------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence 01234568899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc--cCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSI 475 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~--~~~ 475 (517)
..+...++..|+...+.||....+ +++.|+..+|.+||.+|++.. +.++|+.+|+||.+++|... +.+
T Consensus 370 n~dh~kLFeLIl~ed~kFPr~ls~---------eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki 440 (516)
T KOG0690|consen 370 NKDHEKLFELILMEDLKFPRTLSP---------EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKI 440 (516)
T ss_pred ccchhHHHHHHHhhhccCCccCCH---------HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhcc
Confidence 999999999999999999876544 489999999999999999976 46789999999999999965 778
Q ss_pred CCCCCCC
Q 010140 476 KPPEVPN 482 (517)
Q Consensus 476 ~p~~~~~ 482 (517)
.||+.|+
T Consensus 441 ~PPfKPq 447 (516)
T KOG0690|consen 441 EPPFKPQ 447 (516)
T ss_pred CCCCCCC
Confidence 9998876
No 13
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-54 Score=383.18 Aligned_cols=262 Identities=36% Similarity=0.595 Sum_probs=237.6
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
....+++|++++.||+|.||.||+|+.+. ++-.||+|++.+.........+++.+|++|.+.|+||||+++|++|
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekk-----s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f 91 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKK-----SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF 91 (281)
T ss_pred cccchhhccccccccCCccccEeEeeecc-----CCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence 45678999999999999999999999987 7789999999998887777788899999999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
.+....||++||.++|+|+..++..+..++.+..+. .|++|++.||.|+|.+
T Consensus 92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a----------------------------~Yi~q~A~Al~y~h~k 143 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAA----------------------------TYIKQLANALLYCHLK 143 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHhcccccccccchh----------------------------HHHHHHHHHHHHhccC
Confidence 999999999999999999999998777777776665 6889999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
+||||||||+|+|++.+|.+||+|||.+-.-+
T Consensus 144 ~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p------------------------------------------------ 175 (281)
T KOG0580|consen 144 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP------------------------------------------------ 175 (281)
T ss_pred CcccCCCCHHHhccCCCCCeeccCCCceeecC------------------------------------------------
Confidence 99999999999999999999999999972211
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
..+..+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||.
T Consensus 176 --------------------------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFe 223 (281)
T KOG0580|consen 176 --------------------------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFE 223 (281)
T ss_pred --------------------------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchh
Confidence 234567899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
.....+.+.+|.+....+|..... .++|||.+||.++|.+|++.. |++.|||+..
T Consensus 224 s~~~~etYkrI~k~~~~~p~~is~---------~a~dlI~~ll~~~p~~r~~l~----~v~~hpwI~a 278 (281)
T KOG0580|consen 224 SQSHSETYKRIRKVDLKFPSTISG---------GAADLISRLLVKNPIERLALT----EVMDHPWIVA 278 (281)
T ss_pred hhhhHHHHHHHHHccccCCcccCh---------hHHHHHHHHhccCccccccHH----HHhhhHHHHh
Confidence 999999999999998888843322 489999999999999999988 9999999853
No 14
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-54 Score=453.10 Aligned_cols=286 Identities=39% Similarity=0.680 Sum_probs=247.2
Q ss_pred hcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceee
Q 010140 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA 156 (517)
Q Consensus 77 ~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~ 156 (517)
...+...++|.++++||+|+||.|.+++.+. +++.||+|++++-.+..+.....|..|..||...+.+.|+.|+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~-----t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lhy 142 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKS-----TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHY 142 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeec-----cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHH
Confidence 3456778999999999999999999999998 78999999999987766666777888999999999999999999
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
.|+++.++||||||++||||..++.+.. .+++..+ |+|+..|+.||+-||
T Consensus 143 AFQD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~A----------------------------rFY~aEiVlAldslH 192 (1317)
T KOG0612|consen 143 AFQDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWA----------------------------RFYTAEIVLALDSLH 192 (1317)
T ss_pred HhcCccceEEEEecccCchHHHHHhhcC--CChHHHH----------------------------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999998763 5555555 489999999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
+.|+|||||||+|||||..|++||+|||.+-+++...
T Consensus 193 ~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG------------------------------------------- 229 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG------------------------------------------- 229 (1317)
T ss_pred hccceeccCCcceeEecccCcEeeccchhHHhcCCCC-------------------------------------------
Confidence 9999999999999999999999999999884443211
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc----C-CCCCccchHHHHHHHHHHHh
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS----G-QGHGSAVDWWTLGVFLYEML 391 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~----~-~~~~~~~DiWSlGvil~ell 391 (517)
.......+|||.|.+||++. + ..|+..+|+||+||++|||+
T Consensus 230 ----------------------------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl 275 (1317)
T KOG0612|consen 230 ----------------------------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML 275 (1317)
T ss_pred ----------------------------------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence 11234568999999999995 2 45899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHhcC--CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 392 YGTTPFKGENNEKTLINILKK--PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 392 tG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
+|.+||+.++..+.+.+|+.- .+.||.... .+.++++||.+++. +|+.|++- .+++++.+||||.+++|
T Consensus 276 yG~TPFYadslveTY~KIm~hk~~l~FP~~~~-------VSeeakdLI~~ll~-~~e~RLgr-ngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 276 YGETPFYADSLVETYGKIMNHKESLSFPDETD-------VSEEAKDLIEALLC-DREVRLGR-NGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred cCCCcchHHHHHHHHHHHhchhhhcCCCcccc-------cCHHHHHHHHHHhc-Chhhhccc-ccHHHHHhCccccCCCh
Confidence 999999999999999999975 566773322 33469999999987 79999994 45569999999999999
Q ss_pred ccccCCCCCCCCCC
Q 010140 470 ALIRSIKPPEVPNN 483 (517)
Q Consensus 470 ~~~~~~~p~~~~~~ 483 (517)
+.|+...||++|.-
T Consensus 347 ~~iR~~~pP~vPev 360 (1317)
T KOG0612|consen 347 DNIRESVPPVVPEV 360 (1317)
T ss_pred hhhhhcCCCCCCcC
Confidence 99999999999873
No 15
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-53 Score=428.70 Aligned_cols=263 Identities=29% Similarity=0.494 Sum_probs=230.8
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.+-|++++.||.|+.|.|-+|++.. +++.+|||++.+...........+++|+.||+.+.||||+++|++|++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~-----TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAE-----TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhccc-----ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc
Confidence 4679999999999999999999887 89999999998774333445567778999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
++|||+||++||.|++++.+. +.+++.++. ++.+||+.||.|+|..+|+|
T Consensus 86 ~lylvlEyv~gGELFdylv~k--G~l~e~eaa----------------------------~ff~QIi~gv~yCH~~~icH 135 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRK--GPLPEREAA----------------------------HFFRQILDGVSYCHAFNICH 135 (786)
T ss_pred eEEEEEEecCCchhHHHHHhh--CCCCCHHHH----------------------------HHHHHHHHHHHHHhhhccee
Confidence 999999999999999999876 456666555 67799999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|+||+..+++||+|||+|..
T Consensus 136 RDLKpENlLLd~~~nIKIADFGMAsL------------------------------------------------------ 161 (786)
T KOG0588|consen 136 RDLKPENLLLDVKNNIKIADFGMASL------------------------------------------------------ 161 (786)
T ss_pred ccCCchhhhhhcccCEeeeccceeec------------------------------------------------------
Confidence 99999999999999999999999821
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC-CccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~-~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
+..+....+.||+|+|.|||++.|.+| +.++||||+|||||.||+|+.||++.+
T Consensus 162 -------------------------e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN 216 (786)
T KOG0588|consen 162 -------------------------EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN 216 (786)
T ss_pred -------------------------ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc
Confidence 111233456699999999999999998 889999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~ 472 (517)
-..++.++.++.+.+|..... ++++||.+||..||++|+|.+ ||++|||+.+..-...
T Consensus 217 ir~LLlKV~~G~f~MPs~Is~---------eaQdLLr~ml~VDp~~RiT~~----eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 217 IRVLLLKVQRGVFEMPSNISS---------EAQDLLRRMLDVDPSTRITTE----EILKHPFLSGYTSLPS 274 (786)
T ss_pred HHHHHHHHHcCcccCCCcCCH---------HHHHHHHHHhccCccccccHH----HHhhCchhhcCCCCCh
Confidence 999999999999998854332 589999999999999999998 9999999998654433
No 16
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-53 Score=410.67 Aligned_cols=272 Identities=33% Similarity=0.540 Sum_probs=222.4
Q ss_pred hhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHH-----------HHHhHHHHHHHHHH
Q 010140 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR-----------KKLHRADMEKVILT 144 (517)
Q Consensus 76 ~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~-----------~~~~~~~~E~~il~ 144 (517)
..+.+..+++|++++.||+|.||.|-+|++.. +++.||||++.+...... ...+++.+|+.||+
T Consensus 89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~-----~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailK 163 (576)
T KOG0585|consen 89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEV-----DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILK 163 (576)
T ss_pred CcccceehhheehhhhhcCCccceEEEEeecC-----CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHH
Confidence 34566778999999999999999999999886 789999999987765322 12457889999999
Q ss_pred hcCCCCccceeeeeec--CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhh
Q 010140 145 MLDHPFLPTLYAEFEA--SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYR 222 (517)
Q Consensus 145 ~l~HpnIv~l~~~~~~--~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 222 (517)
+|+|||||+|+++..+ .+.+|||+|||..|.+...-.. +. .+.+.+.|
T Consensus 164 kl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~---------------------------els~~~Ar 213 (576)
T KOG0585|consen 164 KLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KP---------------------------ELSEQQAR 213 (576)
T ss_pred hcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCC---cc---------------------------cccHHHHH
Confidence 9999999999999975 5689999999999887542111 11 12334457
Q ss_pred HHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCC
Q 010140 223 FYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQP 302 (517)
Q Consensus 223 ~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (517)
.|+++++.||+|||.+|||||||||+|+||+.+|+|||+|||.+.......
T Consensus 214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~----------------------------- 264 (576)
T KOG0585|consen 214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS----------------------------- 264 (576)
T ss_pred HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC-----------------------------
Confidence 899999999999999999999999999999999999999999983322100
Q ss_pred ccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---C-CCccc
Q 010140 303 VLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---G-HGSAV 378 (517)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~-~~~~~ 378 (517)
.+.........+|||.|+|||.+.+. . .+.+.
T Consensus 265 --------------------------------------------~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~ 300 (576)
T KOG0585|consen 265 --------------------------------------------DEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFAL 300 (576)
T ss_pred --------------------------------------------ccccHHHHhhcCCCccccchHhhcCCCCccccchhh
Confidence 00001112335899999999999873 2 37899
Q ss_pred hHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHh
Q 010140 379 DWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEI 458 (517)
Q Consensus 379 DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~el 458 (517)
||||+||+||.|+.|+.||.+....+++.+|+..++.+|.... +...++|||.+||.+||++|++.. +|
T Consensus 301 DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe-------~~e~~kDli~~lL~KdP~~Ri~l~----~i 369 (576)
T KOG0585|consen 301 DIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPE-------INEDLKDLIKRLLEKDPEQRITLP----DI 369 (576)
T ss_pred hhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCccc-------ccHHHHHHHHHHhhcChhheeehh----hh
Confidence 9999999999999999999999999999999999999987652 223589999999999999999998 99
Q ss_pred hcCCCcCC
Q 010140 459 KRHEFFKG 466 (517)
Q Consensus 459 l~hp~f~~ 466 (517)
+.|||...
T Consensus 370 k~Hpwvt~ 377 (576)
T KOG0585|consen 370 KLHPWVTR 377 (576)
T ss_pred eecceecc
Confidence 99999753
No 17
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-52 Score=420.45 Aligned_cols=262 Identities=37% Similarity=0.580 Sum_probs=226.3
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH--HHHHhHHHHHHHHHHhcC-CCCccceeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI--RKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~E~~il~~l~-HpnIv~l~~~ 157 (517)
...+.|.+++.||+|+||.|++|++.. ++..||+|++.+..... ......+.+|+.+++.+. ||||++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~-----t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRL-----TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeecc-----CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence 456789999999999999999999987 67899999887752221 133456668999999998 9999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+.....+|+|||||.||+|++++... .++.+.+++ .+++||+.||+|||+
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar----------------------------~~F~Qlisav~y~H~ 138 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEAR----------------------------KYFRQLISAVAYCHS 138 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHc--CCCChHHHH----------------------------HHHHHHHHHHHHHHh
Confidence 99999999999999999999999883 455554444 678999999999999
Q ss_pred cCceeccCCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
+||+||||||||||++.+ +++||+|||++....
T Consensus 139 ~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~---------------------------------------------- 172 (370)
T KOG0583|consen 139 RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP---------------------------------------------- 172 (370)
T ss_pred CCEeeCCCCHHHEEecCCCCCEEEeccccccccC----------------------------------------------
Confidence 999999999999999999 999999999984331
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-C-CccchHHHHHHHHHHHhhCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-H-GSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~-~~~~DiWSlGvil~elltG~ 394 (517)
.......++|||+.|+|||++.+.. | +.++||||+||+||.|++|.
T Consensus 173 --------------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~ 220 (370)
T KOG0583|consen 173 --------------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR 220 (370)
T ss_pred --------------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 0122346779999999999999987 8 58999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 395 TPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
.||...+...++.+|..+...+|.... + .++++||.+||..||.+|+++. +++.||||+.-
T Consensus 221 ~PF~d~~~~~l~~ki~~~~~~~p~~~~--S------~~~~~Li~~mL~~~P~~R~t~~----~i~~h~w~~~~ 281 (370)
T KOG0583|consen 221 LPFDDSNVPNLYRKIRKGEFKIPSYLL--S------PEARSLIEKMLVPDPSTRITLL----EILEHPWFQKE 281 (370)
T ss_pred CCCCCccHHHHHHHHhcCCccCCCCcC--C------HHHHHHHHHHcCCCcccCCCHH----HHhhChhhccC
Confidence 999999999999999999998887653 2 2489999999999999999998 99999999963
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-53 Score=412.82 Aligned_cols=266 Identities=27% Similarity=0.427 Sum_probs=218.8
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeec
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEA 160 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~ 160 (517)
..++|.++++||.|+||.||+|+.+. ++..||||.+++....-.+. .-.+|+..|++|+ |||||+|.+++.+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~-----~~~~VAIK~MK~Kf~s~ee~--~nLREvksL~kln~hpniikL~Evi~d 80 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKE-----TGELVAIKKMKKKFYSWEEC--MNLREVKSLRKLNPHPNIIKLKEVIRD 80 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecC-----CCceeeHHHHHhhhccHHHH--HHHHHHHHHHhcCCCCcchhhHHHhhc
Confidence 45789999999999999999999987 67889999998765442221 2246999999998 9999999999988
Q ss_pred Cc-eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 SH-YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 ~~-~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.+ .+|+||||| ..+|+++++.+ .+.++++.+ +.|+.||++||+|+|.+|
T Consensus 81 ~~~~L~fVfE~M-d~NLYqLmK~R-~r~fse~~i----------------------------rnim~QilqGL~hiHk~G 130 (538)
T KOG0661|consen 81 NDRILYFVFEFM-DCNLYQLMKDR-NRLFSESDI----------------------------RNIMYQILQGLAHIHKHG 130 (538)
T ss_pred cCceEeeeHHhh-hhhHHHHHhhc-CCcCCHHHH----------------------------HHHHHHHHHHHHHHHhcC
Confidence 87 999999999 67999999886 455555444 488999999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
+.||||||||||+..+..+||+|||+|+.+...+
T Consensus 131 fFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp---------------------------------------------- 164 (538)
T KOG0661|consen 131 FFHRDLKPENILISGNDVIKIADFGLAREVRSKP---------------------------------------------- 164 (538)
T ss_pred cccccCChhheEecccceeEecccccccccccCC----------------------------------------------
Confidence 9999999999999988999999999997654322
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
..+.++.|++|+|||++.... |+.++||||+|||++|+.+-++.|.
T Consensus 165 ---------------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP 211 (538)
T KOG0661|consen 165 ---------------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP 211 (538)
T ss_pred ---------------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC
Confidence 235568999999999998765 8999999999999999999999999
Q ss_pred CCChHHHHHHHhcC-------------------CCCCCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 399 GENNEKTLINILKK-------------------PLTFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 399 ~~~~~~~~~~i~~~-------------------~~~~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
|.++.+.+.+|..- .+.+|......... .....++.+||.+||.+||.+||||. |
T Consensus 212 G~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~----~ 287 (538)
T KOG0661|consen 212 GASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTAS----Q 287 (538)
T ss_pred CCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHH----H
Confidence 99999988888641 12222222111111 02345688999999999999999998 9
Q ss_pred hhcCCCcCCC
Q 010140 458 IKRHEFFKGI 467 (517)
Q Consensus 458 ll~hp~f~~~ 467 (517)
+|+||||+.-
T Consensus 288 al~~pffq~~ 297 (538)
T KOG0661|consen 288 ALQHPFFQVG 297 (538)
T ss_pred HhcCcccccc
Confidence 9999999854
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.2e-53 Score=418.21 Aligned_cols=256 Identities=30% Similarity=0.523 Sum_probs=225.7
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|.+.+.||+|+||.||+|+.+. +.+.||||.+.+.... .+.++.+.+|++|++.++|||||.++++|+...
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~-----t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~ 74 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKY-----TIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSA 74 (808)
T ss_pred CcchhHHHHhcCCccceeeeccccc-----ceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc
Confidence 3689999999999999999999987 7899999999876433 456778888999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
++|+|.|||.| +|..++... ..++++.+ +.++.|++.||.|||+++|+|
T Consensus 75 ~~~vVte~a~g-~L~~il~~d--~~lpEe~v----------------------------~~~a~~LVsaL~yLhs~rilh 123 (808)
T KOG0597|consen 75 HLWVVTEYAVG-DLFTILEQD--GKLPEEQV----------------------------RAIAYDLVSALYYLHSNRILH 123 (808)
T ss_pred eEEEEehhhhh-hHHHHHHhc--cCCCHHHH----------------------------HHHHHHHHHHHHHHHhcCccc
Confidence 99999999966 999999875 44555444 477899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
||+||.|||+...|++|+||||+|+.+....
T Consensus 124 rd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t------------------------------------------------- 154 (808)
T KOG0597|consen 124 RDMKPQNILLEKGGTLKLCDFGLARAMSTNT------------------------------------------------- 154 (808)
T ss_pred ccCCcceeeecCCCceeechhhhhhhcccCc-------------------------------------------------
Confidence 9999999999999999999999996544211
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
...+++.|||.|||||++.+.+|+..+|+||||||+|||++|++||....-
T Consensus 155 -----------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si 205 (808)
T KOG0597|consen 155 -----------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI 205 (808)
T ss_pred -----------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH
Confidence 123556799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
.++...|..++..+|.... ..+.+||..+|.+||.+|++.. +++.|||+++
T Consensus 206 ~~Lv~~I~~d~v~~p~~~S---------~~f~nfl~gLL~kdP~~RltW~----~Ll~HpF~k~ 256 (808)
T KOG0597|consen 206 TQLVKSILKDPVKPPSTAS---------SSFVNFLQGLLIKDPAQRLTWT----DLLGHPFWKG 256 (808)
T ss_pred HHHHHHHhcCCCCCccccc---------HHHHHHHHHHhhcChhhcccHH----HHhcChHHhh
Confidence 9999999999888776322 2489999999999999999998 9999999986
No 20
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-54 Score=382.45 Aligned_cols=263 Identities=28% Similarity=0.451 Sum_probs=224.0
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++.++||+|.|+.||+|.++. +++.+|+|++........ ..+.+.+|++|.+.|+|||||+|.+.+...
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~-----tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~ 82 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKT-----TGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEE 82 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhcc-----chHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhccc
Confidence 34789999999999999999998886 788999999987766544 667888899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|||+|++.|++|..-+-.. +-. .+....++++||+.||.|+|.+|||
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R----~~y--------------------------SEa~aSH~~rQiLeal~yCH~n~Iv 132 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVAR----EFY--------------------------SEADASHCIQQILEALAYCHSNGIV 132 (355)
T ss_pred ceeEEEEecccchHHHHHHHHH----HHH--------------------------HHHHHHHHHHHHHHHHHHHHhcCce
Confidence 9999999999999997655432 111 2222347999999999999999999
Q ss_pred eccCCCCceEEccC---CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 242 YRDLKPENVLVRED---GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 242 HrDLKp~NILl~~~---~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|||+||+|+|+... .-+||+|||+|.....
T Consensus 133 HRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~----------------------------------------------- 165 (355)
T KOG0033|consen 133 HRDLKPENLLLASKAKGAAVKLADFGLAIEVND----------------------------------------------- 165 (355)
T ss_pred eccCChhheeeeeccCCCceeecccceEEEeCC-----------------------------------------------
Confidence 99999999999533 3699999999843321
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
......++|||.|||||++...+|+..+|||+.|||||-|+.|.+||.
T Consensus 166 --------------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 166 --------------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred --------------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 122346789999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
+.+...++..|..+.+.++...+.... +++++||++||..||.+|+|+. |+|+|||+.+.+
T Consensus 214 ~~~~~rlye~I~~g~yd~~~~~w~~is-----~~Ak~LvrrML~~dP~kRIta~----EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 214 DEDQHRLYEQIKAGAYDYPSPEWDTVT-----PEAKSLIRRMLTVNPKKRITAD----EALKHPWICNRE 274 (355)
T ss_pred CccHHHHHHHHhccccCCCCcccCcCC-----HHHHHHHHHHhccChhhhccHH----HHhCCchhcchH
Confidence 999999999999998888765444332 3589999999999999999998 999999998754
No 21
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-53 Score=386.65 Aligned_cols=255 Identities=27% Similarity=0.393 Sum_probs=210.4
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceee-eee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA-EFE 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~ 159 (517)
..+.+|+++++||+|.||+||++.+.. +++.+|.|.+.-+.+. .+.......|+.+|++|+|||||++++ .|.
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~-----~g~l~a~K~i~f~~md-~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~ 89 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLL-----DGKLVALKKIQFGMMD-AKARQDCVKEISLLKQLNHPNIVQYYAHSFI 89 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeecc-----Ccchhhhhhcchhhcc-HHHHHHHHHHHHHHHhcCCchHHHHHHHhhh
Confidence 445689999999999999999999987 7899999999855443 455667778999999999999999998 565
Q ss_pred cCce-eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-
Q 010140 160 ASHY-SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM- 237 (517)
Q Consensus 160 ~~~~-~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~- 237 (517)
.+.. ++||||||.+|||.+.+++.+...-.+++...| +|..|++.||..+|+
T Consensus 90 ~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vw--------------------------k~f~QL~~AL~~cH~~ 143 (375)
T KOG0591|consen 90 EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVW--------------------------KYFVQLCRALYHCHSK 143 (375)
T ss_pred ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHH--------------------------HHHHHHHHHHHHHhcc
Confidence 5555 899999999999999998765444333333322 677899999999999
Q ss_pred -cC--ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 238 -MG--IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 238 -~~--iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
.. |+||||||.||+|+.+|.|||+|||+++.+...
T Consensus 144 ~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~------------------------------------------ 181 (375)
T KOG0591|consen 144 IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK------------------------------------------ 181 (375)
T ss_pred ccccceeeccCcchheEEcCCCceeeccchhHhHhcch------------------------------------------
Confidence 44 999999999999999999999999999654421
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~ 394 (517)
..-..+++|||+||+||.+.+.+|+.++||||+||++|||+.-+
T Consensus 182 ------------------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~ 225 (375)
T KOG0591|consen 182 ------------------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQ 225 (375)
T ss_pred ------------------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcC
Confidence 11235679999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 395 TPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+||.|.+-.++..+|.++..+ +.... .-+.++..||..|+..||+.||+.-
T Consensus 226 ~PF~g~n~~~L~~KI~qgd~~--~~p~~-----~YS~~l~~li~~ci~vd~~~RP~t~ 276 (375)
T KOG0591|consen 226 SPFYGDNLLSLCKKIEQGDYP--PLPDE-----HYSTDLRELINMCIAVDPEQRPDTV 276 (375)
T ss_pred CCcccccHHHHHHHHHcCCCC--CCcHH-----HhhhHHHHHHHHHccCCcccCCCcc
Confidence 999999888999999888543 21111 1223589999999999999999853
No 22
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.9e-51 Score=408.32 Aligned_cols=268 Identities=37% Similarity=0.711 Sum_probs=227.5
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
....++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+|+.++||||+++++++.
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 88 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKG-----TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ 88 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3456899999999999999999999886 67899999998776554455677888999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
+++..|+||||++||+|.+++... ..++...+ +.++.||+.||+|||++|
T Consensus 89 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~----------------------------~~~~~qi~~aL~~LH~~~ 138 (329)
T PTZ00263 89 DENRVYFLLEFVVGGELFTHLRKA--GRFPNDVA----------------------------KFYHAELVLAFEYLHSKD 138 (329)
T ss_pred cCCEEEEEEcCCCCChHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCC
Confidence 999999999999999999988764 22332222 367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.+|.+||+|||+++....
T Consensus 139 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~------------------------------------------------ 170 (329)
T PTZ00263 139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD------------------------------------------------ 170 (329)
T ss_pred eeecCCCHHHEEECCCCCEEEeeccCceEcCC------------------------------------------------
Confidence 99999999999999999999999999843210
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 171 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 171 ---------------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred ---------------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 01234699999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~ 472 (517)
.+..+.+..+..+...+|... ...+++||.+||+.||.+|+++. ..+.++++||||++.+|..+
T Consensus 218 ~~~~~~~~~i~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~ 282 (329)
T PTZ00263 218 DTPFRIYEKILAGRLKFPNWF---------DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKL 282 (329)
T ss_pred CCHHHHHHHHhcCCcCCCCCC---------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHH
Confidence 888888888887766655421 12489999999999999999853 34569999999999999976
No 23
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.4e-51 Score=409.81 Aligned_cols=281 Identities=36% Similarity=0.685 Sum_probs=232.9
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
.++..++|.+.+.||+|+||.||+|+++.. ....||+|++.+...........+.+|+.+++.++||||+++++++
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNE----DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECC----CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 445678999999999999999999987652 3368999999876655455567788899999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
.+++.+|+||||++||+|.+++.... .++...+ +.++.||+.||+|||++
T Consensus 101 ~~~~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~----------------------------~~~~~qi~~aL~~LH~~ 150 (340)
T PTZ00426 101 KDESYLYLVLEFVIGGEFFTFLRRNK--RFPNDVG----------------------------CFYAAQIVLIFEYLQSL 150 (340)
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHC
Confidence 99999999999999999999987642 2332222 36789999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||+||||||+|||++.+|.+||+|||+++....
T Consensus 151 ~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~----------------------------------------------- 183 (340)
T PTZ00426 151 NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT----------------------------------------------- 183 (340)
T ss_pred CeEccCCCHHHEEECCCCCEEEecCCCCeecCC-----------------------------------------------
Confidence 999999999999999999999999999843210
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 184 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 229 (340)
T PTZ00426 184 ----------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY 229 (340)
T ss_pred ----------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence 0123469999999999999889999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCC-CCChHHhhcCCCcCCCCccccc--CC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS-LKGSVEIKRHEFFKGINWALIR--SI 475 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~-~~~~~ell~hp~f~~~~~~~~~--~~ 475 (517)
+.+....+..+......+|.... ..+.+||.+||+.||++|++. ...++++++||||++++|..+. .+
T Consensus 230 ~~~~~~~~~~i~~~~~~~p~~~~---------~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~ 300 (340)
T PTZ00426 230 ANEPLLIYQKILEGIIYFPKFLD---------NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNV 300 (340)
T ss_pred CCCHHHHHHHHhcCCCCCCCCCC---------HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCC
Confidence 98888888888877666554321 248999999999999999743 2345699999999999999764 45
Q ss_pred CCCCCCCC
Q 010140 476 KPPEVPNN 483 (517)
Q Consensus 476 ~p~~~~~~ 483 (517)
.+|..|..
T Consensus 301 ~~~~~p~~ 308 (340)
T PTZ00426 301 EVPYKPKY 308 (340)
T ss_pred CCCcCCCC
Confidence 67776653
No 24
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.8e-51 Score=403.19 Aligned_cols=265 Identities=40% Similarity=0.722 Sum_probs=223.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|+++. +++.||+|++.............+.+|+.+++.++||||+++++++.+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRI-----SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcC-----CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCe
Confidence 479999999999999999999886 678999999987654444456677889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||+++|+|.+++.... .+..... +.++.||+.||+|||++||+||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~----------------------------~~~~~qi~~~l~~lH~~~i~H~ 125 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG--RFSNSTG----------------------------LFYASEIVCALEYLHSKEIVYR 125 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeeec
Confidence 999999999999999887642 2332222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||+++....
T Consensus 126 dlkp~NIli~~~~~~kl~Dfg~~~~~~~---------------------------------------------------- 153 (291)
T cd05612 126 DLKPENILLDKEGHIKLTDFGFAKKLRD---------------------------------------------------- 153 (291)
T ss_pred CCCHHHeEECCCCCEEEEecCcchhccC----------------------------------------------------
Confidence 9999999999999999999999743210
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 154 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~ 204 (291)
T cd05612 154 -----------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF 204 (291)
T ss_pred -----------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 012346899999999999988999999999999999999999999999888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR 473 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~ 473 (517)
+.+..+......+|... ...+++||.+||+.||.+|++.. ..+.++++||||+.++|....
T Consensus 205 ~~~~~i~~~~~~~~~~~---------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 266 (291)
T cd05612 205 GIYEKILAGKLEFPRHL---------DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVP 266 (291)
T ss_pred HHHHHHHhCCcCCCccC---------CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHh
Confidence 88888888776655432 12489999999999999999732 245599999999999998653
No 25
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-51 Score=391.03 Aligned_cols=277 Identities=27% Similarity=0.368 Sum_probs=230.2
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
+....++|++..+||.|..++||+|++.. ++..||||++.-+.... .+..+.+|+..|+.++||||++++..|
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p-----~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sF 93 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIP-----TNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSF 93 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecc-----cCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEE
Confidence 44566899999999999999999999997 67899999998876553 377788899999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
..+..+|+||.||.+|++.+++.......+.+..+. .+.+++++||.|||.+
T Consensus 94 vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia----------------------------~iLre~LkaL~YLH~~ 145 (516)
T KOG0582|consen 94 VVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIA----------------------------TILREVLKALDYLHQN 145 (516)
T ss_pred EecceeEEeehhhcCCcHHHHHHHHccccccHHHHH----------------------------HHHHHHHHHHHHHHhc
Confidence 999999999999999999999988765555544333 5679999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|.||||||+.||||+.+|.|||+|||.+..+.... .
T Consensus 146 G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G----------------------------------------~---- 181 (516)
T KOG0582|consen 146 GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG----------------------------------------D---- 181 (516)
T ss_pred CceecccccccEEEcCCCcEEEcCceeeeeecccC----------------------------------------c----
Confidence 99999999999999999999999999873322100 0
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhhCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~elltG~~P 396 (517)
....+..+++||+.|||||++..+ +|+.|+||||||++..||.+|..|
T Consensus 182 ------------------------------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aP 231 (516)
T KOG0582|consen 182 ------------------------------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAP 231 (516)
T ss_pred ------------------------------eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCC
Confidence 001112577999999999997553 599999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhH-HhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
|....+.+++...+++.++.+.......++. .....++.+|..||++||.+|||+. ++|+|+||+...
T Consensus 232 f~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAs----kLlkh~FFk~~k 300 (516)
T KOG0582|consen 232 FSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTAS----KLLKHAFFKKAK 300 (516)
T ss_pred cccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHH----HHhccHHHhhcc
Confidence 9999999988888887766555333322222 2234689999999999999999998 999999998753
No 26
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.3e-50 Score=398.22 Aligned_cols=277 Identities=35% Similarity=0.566 Sum_probs=220.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|++.+.||+|+||.||+|.+.. +++.||+|++.+...........+.+|+.+++.++|+||+++++++.+++.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRA-----TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEec-----CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeE
Confidence 38899999999999999999887 6789999999876554444445667899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++|+|..++.......++.... ..++.||+.||+|||++||+|||
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~----------------------------~~~~~qi~~~l~~lH~~~iiH~d 127 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRA----------------------------IFYAAELCCGLEDLQRERIVYRD 127 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCEEeCC
Confidence 99999999999988776543223333222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+|||++.++.+||+|||++......
T Consensus 128 ikp~Nill~~~~~~kl~Dfg~~~~~~~~---------------------------------------------------- 155 (285)
T cd05631 128 LKPENILLDDRGHIRISDLGLAVQIPEG---------------------------------------------------- 155 (285)
T ss_pred CCHHHEEECCCCCEEEeeCCCcEEcCCC----------------------------------------------------
Confidence 9999999999999999999998432100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.....
T Consensus 156 ---------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~ 208 (285)
T cd05631 156 ---------------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV 208 (285)
T ss_pred ---------------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence 01123468999999999999899999999999999999999999998765432
Q ss_pred H----HHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCcccccC--CCC
Q 010140 405 T----LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIRS--IKP 477 (517)
Q Consensus 405 ~----~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~~~--~~p 477 (517)
. ...+......++.. ...++.+||.+||+.||.+||++.. .++++++||||++++|..+.. .+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~---------~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 279 (285)
T cd05631 209 KREEVDRRVKEDQEEYSEK---------FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEP 279 (285)
T ss_pred hHHHHHHHhhcccccCCcc---------CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCc
Confidence 2 22222222222211 1225899999999999999998532 356999999999999998854 477
Q ss_pred CCCCC
Q 010140 478 PEVPN 482 (517)
Q Consensus 478 ~~~~~ 482 (517)
|+.|.
T Consensus 280 ~~~~~ 284 (285)
T cd05631 280 PFCPD 284 (285)
T ss_pred CCCCC
Confidence 87764
No 27
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-51 Score=383.67 Aligned_cols=287 Identities=26% Similarity=0.319 Sum_probs=226.7
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
+-...++|+.+.+|++|+||.||+|+++. +++.||+|.++.+... ...--...+|+.+|.+++|||||.+-++.
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~-----t~eIVALKr~kmekek-~GFPItsLREIniLl~~~H~NIV~vkEVV 144 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKK-----TDEIVALKRLKMEKEK-EGFPITSLREINILLKARHPNIVEVKEVV 144 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCC-----cceeEEeeeccccccc-CCCcchhHHHHHHHHhcCCCCeeeeEEEE
Confidence 34567899999999999999999999998 7899999999866421 11122345699999999999999999987
Q ss_pred e--cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 159 E--ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 159 ~--~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
. +-+.+|||||||+. ||..++..-+ .++...+++ .++.|++.||+|||
T Consensus 145 vG~~~d~iy~VMe~~Eh-DLksl~d~m~-q~F~~~evK----------------------------~L~~QlL~glk~lH 194 (419)
T KOG0663|consen 145 VGSNMDKIYIVMEYVEH-DLKSLMETMK-QPFLPGEVK----------------------------TLMLQLLRGLKHLH 194 (419)
T ss_pred eccccceeeeeHHHHHh-hHHHHHHhcc-CCCchHHHH----------------------------HHHHHHHHHHHHHh
Confidence 5 34579999999954 9999887754 455555554 67899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
.+.|+||||||+|+|++..|.+||+|||+|+.+....
T Consensus 195 ~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~------------------------------------------- 231 (419)
T KOG0663|consen 195 DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL------------------------------------------- 231 (419)
T ss_pred hceeEecccchhheeeccCCcEEecccchhhhhcCCc-------------------------------------------
Confidence 9999999999999999999999999999997665321
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~ 395 (517)
...+..+-|.+|+|||.+.|.. |++++|+||+|||+.||+++++
T Consensus 232 -----------------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kP 276 (419)
T KOG0663|consen 232 -----------------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKP 276 (419)
T ss_pred -----------------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCC
Confidence 1234567899999999999976 9999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCC-----CCCCCCCC---------------chhHH---hhhhHHHHHHHhccCCcccccCCC
Q 010140 396 PFKGENNEKTLINILKKPLT-----FPRIGVSS---------------SKEFE---EVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~-----~p~~~~~~---------------~~~~~---~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.|.|..+.+.+.+|...... +|...... ...|. ......+|+..+|.+||.+|.|+.
T Consensus 277 lf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~ 356 (419)
T KOG0663|consen 277 LFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAE 356 (419)
T ss_pred CCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHH
Confidence 99999999988888652111 11110000 00111 113467999999999999999998
Q ss_pred CChHHhhcCCCcCCCCcccccCCCCCCCCCC
Q 010140 453 KGSVEIKRHEFFKGINWALIRSIKPPEVPNN 483 (517)
Q Consensus 453 ~~~~ell~hp~f~~~~~~~~~~~~p~~~~~~ 483 (517)
|.|+|+||.......-....|.++...
T Consensus 357 ----~~L~h~~F~e~P~p~~P~~~Pt~P~k~ 383 (419)
T KOG0663|consen 357 ----DGLKHEYFRETPLPIDPSMFPTWPAKS 383 (419)
T ss_pred ----HhhcccccccCCCCCChhhcCCCcccc
Confidence 999999999877665566666655443
No 28
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-52 Score=403.76 Aligned_cols=283 Identities=28% Similarity=0.355 Sum_probs=220.7
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...+.|+.+++||+|+||.||+|++.. +++.||+|.+..+... ........+|+.||++|+||||++|.+...+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~-----tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~ 187 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLE-----TGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTS 187 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecc-----cCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEe
Confidence 456789999999999999999999987 8899999999866432 2334456679999999999999999998876
Q ss_pred C--ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 161 S--HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 161 ~--~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
. ..+|||+|||+ -||.-++... .-.|.+ .+++.|+.||+.||+|||++
T Consensus 188 ~~~~siYlVFeYMd-hDL~GLl~~p-~vkft~----------------------------~qIKc~mkQLl~Gl~~cH~~ 237 (560)
T KOG0600|consen 188 KLSGSIYLVFEYMD-HDLSGLLSSP-GVKFTE----------------------------PQIKCYMKQLLEGLEYCHSR 237 (560)
T ss_pred cCCceEEEEEeccc-chhhhhhcCC-CcccCh----------------------------HHHHHHHHHHHHHHHHHhhc
Confidence 5 78999999995 4887766542 223333 34568999999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||+|||||.+|||||.+|.+||+|||||+.+....
T Consensus 238 gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--------------------------------------------- 272 (560)
T KOG0600|consen 238 GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--------------------------------------------- 272 (560)
T ss_pred CeeeccccccceEEcCCCCEEeccccceeeccCCC---------------------------------------------
Confidence 99999999999999999999999999996544211
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf 397 (517)
....++.+-|.+|+|||.+.|.. |+.++|+||+||||.||+.|++.|
T Consensus 273 --------------------------------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~ 320 (560)
T KOG0600|consen 273 --------------------------------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPIL 320 (560)
T ss_pred --------------------------------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCc
Confidence 11245567899999999999975 999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCC-----CCCCCCCC----------chh----H-HhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 398 KGENNEKTLINILKKPLT-----FPRIGVSS----------SKE----F-EEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~-----~p~~~~~~----------~~~----~-~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
.|.++.+.+.+|.+.-.. ++....+. ... + .......+|+..||..||.+|.|+. +
T Consensus 321 ~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~----~ 396 (560)
T KOG0600|consen 321 QGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTAS----S 396 (560)
T ss_pred CCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHH----H
Confidence 999999999888652111 11000000 000 1 1123568999999999999999998 9
Q ss_pred hhcCCCcCCCCcccccCCCCCCC
Q 010140 458 IKRHEFFKGINWALIRSIKPPEV 480 (517)
Q Consensus 458 ll~hp~f~~~~~~~~~~~~p~~~ 480 (517)
+|+|+||.......-....|-+.
T Consensus 397 aL~seyF~t~p~~~~p~~Lp~y~ 419 (560)
T KOG0600|consen 397 ALQSEYFTTEPLPCDPSSLPKYP 419 (560)
T ss_pred HhcCcccccCCCCCCcccCCCCC
Confidence 99999996544443334444433
No 29
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-51 Score=405.29 Aligned_cols=307 Identities=33% Similarity=0.609 Sum_probs=243.0
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
+....-|..++.||-|+||+|.+++..+ +...||+|.+++.....++++..+..|..||...+.+.||+||..|+
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvD-----T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ 699 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVD-----TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ 699 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecc-----hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec
Confidence 3445679999999999999999999887 68899999999999999999999999999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
+.+.+|+||+|++|||+..+|-+. .-|.+.. .|+|+++|..|+++.|..|
T Consensus 700 DkdnLYFVMdYIPGGDmMSLLIrm--gIFeE~L----------------------------ARFYIAEltcAiesVHkmG 749 (1034)
T KOG0608|consen 700 DKDNLYFVMDYIPGGDMMSLLIRM--GIFEEDL----------------------------ARFYIAELTCAIESVHKMG 749 (1034)
T ss_pred cCCceEEEEeccCCccHHHHHHHh--ccCHHHH----------------------------HHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999887653 2233322 2589999999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccc--cccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDV--VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+|||||||+|||||.+|++||+||||+.-+-. ..++..
T Consensus 750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq---------------------------------------- 789 (1034)
T KOG0608|consen 750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ---------------------------------------- 789 (1034)
T ss_pred ceecccCccceEEccCCceeeeeccccccceecccccccc----------------------------------------
Confidence 99999999999999999999999999853321 111110
Q ss_pred cccccccccccccCCCCCCccccCCcccc---------------ccccccCCcccCCCCCcccchhhcCCCCCccchHHH
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVV---------------AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWT 382 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWS 382 (517)
.|++..+..++-.... ..-..-.....+||+.|+|||++....|+..+|+||
T Consensus 790 -------------~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws 856 (1034)
T KOG0608|consen 790 -------------EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWS 856 (1034)
T ss_pred -------------CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhH
Confidence 1111111111111000 001112245679999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 383 LGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 383 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.|||||||+.|++||...++.+...+++... +.++..... +.++.+||.++.. +++.|++- .+..|++.
T Consensus 857 ~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~l-------s~e~~~li~kLc~-sad~RLGk-ng~d~vKa 927 (1034)
T KOG0608|consen 857 VGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNL-------SKEALDLIQKLCC-SADSRLGK-NGADQVKA 927 (1034)
T ss_pred hhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccccccccc-------CHHHHHHHHHHhc-Chhhhhcc-cchhhhhc
Confidence 9999999999999999988877766665533 233332222 2357899988664 79999986 45668999
Q ss_pred CCCcCCCCcccccCCCCCCCCCC
Q 010140 461 HEFFKGINWALIRSIKPPEVPNN 483 (517)
Q Consensus 461 hp~f~~~~~~~~~~~~p~~~~~~ 483 (517)
||||++|||..++.+..|++|..
T Consensus 928 HpfFkgIDfsslRkq~ApYIP~I 950 (1034)
T KOG0608|consen 928 HPFFKGIDFSSLRKQRAPYIPRI 950 (1034)
T ss_pred CccccccchHhhhhccCCcCccc
Confidence 99999999999999999988763
No 30
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.6e-50 Score=408.62 Aligned_cols=306 Identities=32% Similarity=0.563 Sum_probs=224.6
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||+||+|+++. +++.||||++.+...........+..|+.++..++||||+++++.+.+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKD-----TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECC-----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe
Confidence 479999999999999999999886 678999999987665555566778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|||||||+||+|.+++... ..+++..+ +.++.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~----------------------------~~~~~qi~~aL~~lH~~givHr 125 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKK--DTLTEEET----------------------------QFYIAETVLAIDSIHQLGFIHR 125 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeEec
Confidence 99999999999999998764 23333322 4678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||+++.+........... .....++. .. . .... ....
T Consensus 126 DlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~--------~~~~~~~~-------~~-~--~~~~--~~~~---- 181 (363)
T cd05628 126 DIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRN--------LNHSLPSD-------FT-F--QNMN--SKRK---- 181 (363)
T ss_pred CCCHHHeEECCCCCEEEeeccCccccccccccccccc--------cccccccc-------cc-c--cccc--cccc----
Confidence 9999999999999999999999865432110000000 00000000 00 0 0000 0000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
...............+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus 182 -------------------~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~ 242 (363)
T cd05628 182 -------------------AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242 (363)
T ss_pred -------------------cchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHH
Confidence 0000000011224568999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhcC--CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCC
Q 010140 404 KTLINILKK--PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIK 476 (517)
Q Consensus 404 ~~~~~i~~~--~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~ 476 (517)
+.+.++... ...+|.... ...++++||.+|+. +|.+|++. ..+.||++||||++++|+.++...
T Consensus 243 ~~~~~i~~~~~~~~~p~~~~-------~s~~~~~li~~l~~-~~~~r~~r-~~~~ei~~hp~f~~~~~~~~~~~~ 308 (363)
T cd05628 243 ETYKKVMNWKETLIFPPEVP-------ISEKAKDLILRFCC-EWEHRIGA-PGVEEIKTNPFFEGVDWEHIRERP 308 (363)
T ss_pred HHHHHHHcCcCcccCCCcCC-------CCHHHHHHHHHHcC-ChhhcCCC-CCHHHHhCCCCCCCCCHHHHHhCC
Confidence 888888763 233443221 12258999999885 66666432 223499999999999999886543
No 31
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.9e-50 Score=409.76 Aligned_cols=317 Identities=33% Similarity=0.576 Sum_probs=231.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|++.. +++.||||++.+...........+.+|+.+|..++||||++++++|.+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKD-----TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCe
Confidence 479999999999999999999987 678999999987655545566777889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+|||||+||+|.+++.... .+++.. ++.|+.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~----------------------------~~~~~~qi~~aL~~lH~~~ivH~ 125 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD--TFTEEE----------------------------TRFYIAETILAIDSIHKLGYIHR 125 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEec
Confidence 999999999999999886642 233322 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||+++.+............ ... .............
T Consensus 126 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~----~~~-----------~~~~~~~~~~~~~----------- 179 (364)
T cd05599 126 DIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRIL----SHA-----------LPSNFLDFISKPM----------- 179 (364)
T ss_pred cCCHHHeEECCCCCEEEeecccceeccccccccccccc----ccc-----------ccccccccccccc-----------
Confidence 99999999999999999999998654321100000000 000 0000000000000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.... ................+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus 180 ------~~~~--------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~ 245 (364)
T cd05599 180 ------SSKR--------KAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ 245 (364)
T ss_pred ------cccc--------cccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH
Confidence 0000 00000000011223468999999999999989999999999999999999999999998888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPN 482 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~~~~~ 482 (517)
+.+..+.......+..... ....++.+||.+||. +|.+|++. ..+.|+++||||++++|..+....+|.+|.
T Consensus 246 ~~~~~i~~~~~~~~~~~~~-----~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~ 317 (364)
T cd05599 246 ETYRKIINWKETLQFPDEV-----PLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPIIPE 317 (364)
T ss_pred HHHHHHHcCCCccCCCCCC-----CCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCCCC
Confidence 8777776543222111111 112358999999997 99999984 234599999999999999887777776654
No 32
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.6e-51 Score=369.01 Aligned_cols=266 Identities=28% Similarity=0.384 Sum_probs=213.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|..+++||+|.||.||+|++.. +++.||||.++..... ........+|+++|+.++|+||+.|+++|...+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~-----t~~~VAIKKIkl~~~k-dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTE-----TGKRVAIKKIKLGNAK-DGINRTALREIKLLQELKHPNIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecC-----CCcEEEEEEeeccccc-cCccHHHHHHHHHHHHccCcchhhhhhhccCCCc
Confidence 578899999999999999999887 7899999999866432 1223445679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+.||+||+ ..||...++... -.+...+++.|+.++++||+|||++.|+||
T Consensus 76 l~lVfEfm-~tdLe~vIkd~~-----------------------------i~l~pa~iK~y~~m~LkGl~y~H~~~IlHR 125 (318)
T KOG0659|consen 76 LSLVFEFM-PTDLEVVIKDKN-----------------------------IILSPADIKSYMLMTLKGLAYCHSKWILHR 125 (318)
T ss_pred eEEEEEec-cccHHHHhcccc-----------------------------cccCHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999 569998887642 122334557899999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||.|+||+.+|.+||+|||+|+.+.....
T Consensus 126 DlKPnNLLis~~g~lKiADFGLAr~f~~p~~------------------------------------------------- 156 (318)
T KOG0659|consen 126 DLKPNNLLISSDGQLKIADFGLARFFGSPNR------------------------------------------------- 156 (318)
T ss_pred cCCccceEEcCCCcEEeecccchhccCCCCc-------------------------------------------------
Confidence 9999999999999999999999966542111
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.....+-|.+|+|||.+.|.. |+..+||||.|||+.||+.|.+-|.|.++
T Consensus 157 -----------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD 207 (318)
T KOG0659|consen 157 -----------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD 207 (318)
T ss_pred -----------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch
Confidence 112226799999999999975 99999999999999999999999999999
Q ss_pred HHHHHHHhcCCC-----CCCCCCCC-Cch------------h-HHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 403 EKTLINILKKPL-----TFPRIGVS-SSK------------E-FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 403 ~~~~~~i~~~~~-----~~p~~~~~-~~~------------~-~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
.+.+..|...-. .+|..... ... - ..+..++.||+.+||..||.+|+++. |+|+|+|
T Consensus 208 idQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~----qaL~~~y 283 (318)
T KOG0659|consen 208 IDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITAS----QALKHPY 283 (318)
T ss_pred HHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHH----HHhcchh
Confidence 998888865211 11111000 000 0 01233578999999999999999998 9999999
Q ss_pred cCCC
Q 010140 464 FKGI 467 (517)
Q Consensus 464 f~~~ 467 (517)
|++.
T Consensus 284 f~~~ 287 (318)
T KOG0659|consen 284 FKSL 287 (318)
T ss_pred hhcC
Confidence 9863
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.4e-50 Score=403.43 Aligned_cols=270 Identities=40% Similarity=0.710 Sum_probs=221.7
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|+++. +++.||||++.+..........++.+|+.+|+.++||||+++++++..++.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKA-----TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence 469999999999999886 678999999987765555556677789999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|++||+|.+++... ..+.+.. ++.++.||+.||+|||++||+||||||+|
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~----------------------------~~~~~~qi~~~L~~lH~~~ivHrDlkp~N 125 (323)
T cd05571 76 YANGGELFFHLSRE--RVFSEDR----------------------------ARFYGAEIVSALGYLHSCDVVYRDLKLEN 125 (323)
T ss_pred CCCCCcHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeEeCCCCHHH
Confidence 99999999888654 2233222 23678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.....
T Consensus 126 Ill~~~~~~kl~DfG~a~~~~~~--------------------------------------------------------- 148 (323)
T cd05571 126 LMLDKDGHIKITDFGLCKEGISD--------------------------------------------------------- 148 (323)
T ss_pred EEECCCCCEEEeeCCCCcccccC---------------------------------------------------------
Confidence 99999999999999998421100
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i 409 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+
T Consensus 149 ---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~ 207 (323)
T cd05571 149 ---------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 207 (323)
T ss_pred ---------------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence 01122457999999999999999999999999999999999999999988888877777
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEVP 481 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~~ 481 (517)
......+|... ..++.+||.+||+.||++||+.. ..+.++++||||++++|..+. ...||..|
T Consensus 208 ~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~ 273 (323)
T cd05571 208 LMEEIRFPRTL---------SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKP 273 (323)
T ss_pred HcCCCCCCCCC---------CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 77666555321 22589999999999999999532 234599999999999999774 44455443
No 34
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.1e-50 Score=411.33 Aligned_cols=321 Identities=34% Similarity=0.621 Sum_probs=229.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|+++. +++.||||++.+...........+.+|+.+++.++||||++++++|.+..+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKD-----TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECC-----CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence 479999999999999999999886 678999999987655555566778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|||||||+||+|.+++... ..+.+.. ++.|+.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~----------------------------~~~~~~ql~~aL~~LH~~givHr 125 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKY--DTFSEDV----------------------------TRFYMAECVLAIEAVHKLGFIHR 125 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeecc
Confidence 99999999999999988653 2233222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+++.+....... .+.......... . . .........
T Consensus 126 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~----------~~~~~~~~~~~~---------~--~---~~~~~~~~~ 181 (377)
T cd05629 126 DIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA----------YYQKLLQGKSNK---------N--R---IDNRNSVAV 181 (377)
T ss_pred CCCHHHEEECCCCCEEEeecccccccccccccc----------cccccccccccc---------c--c---ccccccccc
Confidence 999999999999999999999985432111000 000000000000 0 0 000000000
Q ss_pred cccccccCCCCCCccccCCcccc---ccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVV---AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
..... ...+.... ...........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.
T Consensus 182 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (377)
T cd05629 182 DSINL----------TMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSE 251 (377)
T ss_pred ccccc----------cccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCC
Confidence 00000 00000000 000001122468999999999999988999999999999999999999999988
Q ss_pred ChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCC
Q 010140 401 NNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPP 478 (517)
Q Consensus 401 ~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~ 478 (517)
+..+.+..+.... ..+|... ....++.+||.+||. +|.+|++. ..+.|+++||||++++|+.++.+.+|
T Consensus 252 ~~~~~~~~i~~~~~~~~~p~~~-------~~s~~~~dli~~lL~-~~~~r~~r-~~~~~~l~hp~~~~~~~~~~~~~~~~ 322 (377)
T cd05629 252 NSHETYRKIINWRETLYFPDDI-------HLSVEAEDLIRRLIT-NAENRLGR-GGAHEIKSHPFFRGVDWDTIRQIRAP 322 (377)
T ss_pred CHHHHHHHHHccCCccCCCCCC-------CCCHHHHHHHHHHhc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHccCCCC
Confidence 8877777776532 2233211 112358999999997 88887632 12349999999999999999988888
Q ss_pred CCCC
Q 010140 479 EVPN 482 (517)
Q Consensus 479 ~~~~ 482 (517)
.+|.
T Consensus 323 ~~~~ 326 (377)
T cd05629 323 FIPQ 326 (377)
T ss_pred cccC
Confidence 8765
No 35
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-51 Score=391.83 Aligned_cols=284 Identities=37% Similarity=0.622 Sum_probs=244.4
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+..+.|+.-++||+|+||.||-|+.+. +++.||+|.+.+.....+........|..||.+++.+.||.|-..|+
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvra-----TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfe 255 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRA-----TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFE 255 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEec-----chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeec
Confidence 3567889999999999999999999987 88999999999998887777778888999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
..+.+||||..|+||||.-+|...+...+.+..+. +|+++|+.||++||.++
T Consensus 256 Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~----------------------------FYAAEi~cGLehlH~~~ 307 (591)
T KOG0986|consen 256 TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRAR----------------------------FYAAEIICGLEHLHRRR 307 (591)
T ss_pred CCCceEEEEEeecCCceeEEeeccCCCCCchHHHH----------------------------HHHHHHHhhHHHHHhcc
Confidence 99999999999999999887777665555555443 89999999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
||.|||||+|||+|+.|++.|+|.|+|..+..
T Consensus 308 iVYRDLKPeNILLDd~GhvRISDLGLAvei~~------------------------------------------------ 339 (591)
T KOG0986|consen 308 IVYRDLKPENILLDDHGHVRISDLGLAVEIPE------------------------------------------------ 339 (591)
T ss_pred eeeccCChhheeeccCCCeEeeccceEEecCC------------------------------------------------
Confidence 99999999999999999999999999944331
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.......+||.+|||||++.+..|+...|+|||||+||||+.|+.||..
T Consensus 340 -------------------------------g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 340 -------------------------------GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred -------------------------------CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 1122344899999999999999999999999999999999999999986
Q ss_pred CCh----HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc--
Q 010140 400 ENN----EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI-- 472 (517)
Q Consensus 400 ~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~-- 472 (517)
..+ +++-++++..+..++..- +.++++|++.+|.+||.+|++.. +.+.++++||||++++|..+
T Consensus 389 ~KeKvk~eEvdrr~~~~~~ey~~kF---------S~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rlea 459 (591)
T KOG0986|consen 389 RKEKVKREEVDRRTLEDPEEYSDKF---------SEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEA 459 (591)
T ss_pred hhhhhhHHHHHHHHhcchhhccccc---------CHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhc
Confidence 533 355566666666665322 23589999999999999999987 67889999999999999977
Q ss_pred cCCCCCCCCCCc
Q 010140 473 RSIKPPEVPNND 484 (517)
Q Consensus 473 ~~~~p~~~~~~~ 484 (517)
.-+.||++|...
T Consensus 460 gml~PPfiPdp~ 471 (591)
T KOG0986|consen 460 GMLEPPFIPDPG 471 (591)
T ss_pred cCCCCCCCCCcc
Confidence 557899998753
No 36
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.3e-50 Score=402.74 Aligned_cols=276 Identities=35% Similarity=0.588 Sum_probs=229.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|++.. +++.||||++.+...........+..|+.++..++||||+++++++..++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKD-----TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCE
Confidence 479999999999999999999886 678999999987765544556777889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.||||||++||+|.+++.... .+.... .+.++.||+.||.|||++||+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~----------------------------~~~~~~qi~~~l~~lH~~~ivH~ 125 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG--VLSEDH----------------------------ARFYMAEMFEAVDALHELGYIHR 125 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCcccc
Confidence 999999999999999986542 222222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||++.....
T Consensus 126 dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---------------------------------------------------- 153 (333)
T cd05600 126 DLKPENFLIDASGHIKLTDFGLSKGIVT---------------------------------------------------- 153 (333)
T ss_pred CCCHHHEEECCCCCEEEEeCcCCccccc----------------------------------------------------
Confidence 9999999999999999999999843210
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus 154 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~ 204 (333)
T cd05600 154 -----------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN 204 (333)
T ss_pred -----------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH
Confidence 122346999999999999999999999999999999999999999998887
Q ss_pred HHHHHHhcCCCC--CCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCCCCC
Q 010140 404 KTLINILKKPLT--FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVP 481 (517)
Q Consensus 404 ~~~~~i~~~~~~--~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~~~~ 481 (517)
+.+..+...... .|..... ......++.+||.+||..+|.+||++. ++++||||++++|..+....||.+|
T Consensus 205 ~~~~~i~~~~~~~~~~~~~~~---~~~~s~~~~~li~~~l~~~~~rr~s~~----~ll~h~~~~~~~~~~~~~~~~~~~~ 277 (333)
T cd05600 205 ETWENLKYWKETLQRPVYDDP---RFNLSDEAWDLITKLINDPSRRFGSLE----DIKNHPFFKEVDWNELRELKPPFVP 277 (333)
T ss_pred HHHHHHHhccccccCCCCCcc---ccccCHHHHHHHHHHhhChhhhcCCHH----HHHhCcccCCCCHHHHhhCCCCCCC
Confidence 777766543221 1211110 012234589999999999999999987 9999999999999999888888776
Q ss_pred C
Q 010140 482 N 482 (517)
Q Consensus 482 ~ 482 (517)
.
T Consensus 278 ~ 278 (333)
T cd05600 278 E 278 (333)
T ss_pred C
Confidence 5
No 37
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-51 Score=390.66 Aligned_cols=282 Identities=36% Similarity=0.669 Sum_probs=244.9
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 158 (517)
++...+|.++.+||+|+||.|.+|..++ +.+.||||+++++........+--..|.++|... +-|.+++|+.+|
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkg-----tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccC-----cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh
Confidence 4556789999999999999999999887 7889999999988766566666666788888877 578999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
+.-+.+|+||||+.||||.-.++.. .++.++.+. +|+.+|+-||-|||++
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~Av----------------------------FYAaEiaigLFFLh~k 469 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAV----------------------------FYAAEIAIGLFFLHSK 469 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHHHh--cccCCchhh----------------------------hhhHHHHHHhhhhhcC
Confidence 9999999999999999998888765 455555554 7899999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|||.||||.+|||++.+|++||+|||+++.-.
T Consensus 470 gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni------------------------------------------------ 501 (683)
T KOG0696|consen 470 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI------------------------------------------------ 501 (683)
T ss_pred CeeeeeccccceEeccCCceEeeecccccccc------------------------------------------------
Confidence 99999999999999999999999999983210
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.....+.++||||.|+|||++..++|+.++|+||+||+||||+.|++||+
T Consensus 502 ------------------------------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 502 ------------------------------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred ------------------------------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 11234568899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc--cCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSI 475 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~--~~~ 475 (517)
++++.++++.|......+|.... .++.+++..+|.+.|.+|++.. .+-.++..||||+.|||+.+ +.+
T Consensus 552 GeDE~elF~aI~ehnvsyPKslS---------kEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~ei 622 (683)
T KOG0696|consen 552 GEDEDELFQAIMEHNVSYPKSLS---------KEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREI 622 (683)
T ss_pred CCCHHHHHHHHHHccCcCccccc---------HHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccC
Confidence 99999999999999988886432 2588999999999999999975 33468999999999999988 668
Q ss_pred CCCCCCCC
Q 010140 476 KPPEVPNN 483 (517)
Q Consensus 476 ~p~~~~~~ 483 (517)
.||+.|..
T Consensus 623 qPPfkPk~ 630 (683)
T KOG0696|consen 623 QPPFKPKI 630 (683)
T ss_pred CCCCCCcc
Confidence 89987764
No 38
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-51 Score=388.03 Aligned_cols=257 Identities=30% Similarity=0.536 Sum_probs=228.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
-+|++.+.||+|+||.|-+|..+. .++.||||.++++.......+-++.+|++||..|+||||+.+|++|++.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~-----sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHK-----SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhcc-----CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence 479999999999999999999876 789999999999998888888899999999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
..|||||..+|+|++|+... ..+++.++ |++.+||+.|+.|+|.++++||
T Consensus 128 IvivMEYaS~GeLYDYiSer--~~LsErEa----------------------------RhfFRQIvSAVhYCHknrVvHR 177 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISER--GSLSEREA----------------------------RHFFRQIVSAVHYCHKNRVVHR 177 (668)
T ss_pred EEEEEEecCCccHHHHHHHh--ccccHHHH----------------------------HHHHHHHHHHHHHHhhccceec
Confidence 99999999999999999875 45555555 4778999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
|||.+|||+|.++++||+|||++..+..
T Consensus 178 DLKLENILLD~N~NiKIADFGLSNly~~---------------------------------------------------- 205 (668)
T KOG0611|consen 178 DLKLENILLDQNNNIKIADFGLSNLYAD---------------------------------------------------- 205 (668)
T ss_pred ccchhheeecCCCCeeeeccchhhhhcc----------------------------------------------------
Confidence 9999999999999999999999843321
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC-CccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~-~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.....++||+|.|.+||++.|.+| ++.+|.|||||+||.|+.|..||+|.+.
T Consensus 206 ---------------------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh 258 (668)
T KOG0611|consen 206 ---------------------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH 258 (668)
T ss_pred ---------------------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH
Confidence 123467899999999999999998 8899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccc
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL 471 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~ 471 (517)
..+..+|..+.+..|.... ++.-||+.||..||++|.|++ ++-.|=| ++|..
T Consensus 259 k~lvrQIs~GaYrEP~~PS----------dA~gLIRwmLmVNP~RRATie----DiAsHWW---vNwgy 310 (668)
T KOG0611|consen 259 KRLVRQISRGAYREPETPS----------DASGLIRWMLMVNPERRATIE----DIASHWW---VNWGY 310 (668)
T ss_pred HHHHHHhhcccccCCCCCc----------hHHHHHHHHHhcCcccchhHH----HHhhhhe---eeccc
Confidence 9999999988776664332 378999999999999999998 8999966 45553
No 39
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.7e-49 Score=396.01 Aligned_cols=274 Identities=39% Similarity=0.720 Sum_probs=223.3
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHH---HhcCCCCccceeeeeecCc
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL---TMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il---~~l~HpnIv~l~~~~~~~~ 162 (517)
|++++.||+|+||.||+|+++. +++.||||++++...........+..|+.++ +.++||||+++++++...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKK-----TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 7899999999999999999886 6789999999876544444555666676655 4568999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|+||||++||+|..++.. ..+.+... +.++.||+.||+|||++||+|
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~---~~l~~~~~----------------------------~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT---DVFSEPRA----------------------------VFYAACVVLGLQYLHENKIVY 124 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc---CCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeEe
Confidence 99999999999999877653 22333222 367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++....
T Consensus 125 rdlkp~Nill~~~~~~kL~Dfg~~~~~~~--------------------------------------------------- 153 (324)
T cd05589 125 RDLKLDNLLLDTEGFVKIADFGLCKEGMG--------------------------------------------------- 153 (324)
T ss_pred cCCCHHHeEECCCCcEEeCcccCCccCCC---------------------------------------------------
Confidence 99999999999999999999998732110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 154 ---------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~ 206 (324)
T cd05589 154 ---------------------------FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE 206 (324)
T ss_pred ---------------------------CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH
Confidence 00112345799999999999998899999999999999999999999999888
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCcccc--cCCCCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPE 479 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~--~~~~p~~ 479 (517)
.+.+..+......+|... ...+.+||.+||+.||.+||+..+ .+.++++||||++++|... +.+.||.
T Consensus 207 ~~~~~~i~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~ 277 (324)
T cd05589 207 EEVFDSIVNDEVRYPRFL---------SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPF 277 (324)
T ss_pred HHHHHHHHhCCCCCCCCC---------CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCc
Confidence 888888877766555322 124899999999999999997653 4679999999999999865 4455666
Q ss_pred CCC
Q 010140 480 VPN 482 (517)
Q Consensus 480 ~~~ 482 (517)
.|.
T Consensus 278 ~~~ 280 (324)
T cd05589 278 VPT 280 (324)
T ss_pred cCC
Confidence 554
No 40
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.8e-49 Score=396.54 Aligned_cols=272 Identities=39% Similarity=0.722 Sum_probs=222.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. +++.||||++.+...........+..|..++..+ +||||+++++++...+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKE-----SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcC-----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence 469999999999999886 6789999999876554445556667788888876 7999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+.+... +.++.||+.||+|||++||+||||||+
T Consensus 76 Ey~~~g~L~~~i~~~--~~l~~~~~----------------------------~~~~~ql~~~L~~lH~~~ivH~dlkp~ 125 (320)
T cd05590 76 EFVNGGDLMFHIQKS--RRFDEARA----------------------------RFYAAEITSALMFLHDKGIIYRDLKLD 125 (320)
T ss_pred cCCCCchHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeEeCCCCHH
Confidence 999999999888654 22333222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 NIli~~~~~~kL~DfG~~~~~~~~-------------------------------------------------------- 149 (320)
T cd05590 126 NVLLDHEGHCKLADFGMCKEGIFN-------------------------------------------------------- 149 (320)
T ss_pred HeEECCCCcEEEeeCCCCeecCcC--------------------------------------------------------
Confidence 999999999999999997321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~ 207 (320)
T cd05590 150 ----------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA 207 (320)
T ss_pred ----------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence 0012234699999999999998899999999999999999999999999998888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC--ChHHhhcCCCcCCCCcccc--cCCCCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK--GSVEIKRHEFFKGINWALI--RSIKPPEVPNN 483 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~--~~~ell~hp~f~~~~~~~~--~~~~p~~~~~~ 483 (517)
+......+|... ..++.+||.+||+.||.+|+++.+ ..+++++||||++++|..+ +.+.||+.|..
T Consensus 208 i~~~~~~~~~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~ 277 (320)
T cd05590 208 ILNDEVVYPTWL---------SQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRI 277 (320)
T ss_pred HhcCCCCCCCCC---------CHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence 887766554321 124899999999999999999832 2359999999999999876 34566666654
No 41
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.1e-49 Score=405.91 Aligned_cols=323 Identities=31% Similarity=0.518 Sum_probs=228.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|++++.||+|+||.||+|+++. +++.||||++.+...........+.+|+.+++.++||||+++++.|.+++.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVD-----TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECC-----CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEE
Confidence 69999999999999999999886 6789999999877655556677888899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+|||||+||+|.+++.+. ..++... ++.++.||+.||+|||++||+|||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~--~~~~e~~----------------------------~~~~~~qi~~al~~lH~~~ivHrD 126 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM--GIFPEDL----------------------------ARFYIAELTCAVESVHKMGFIHRD 126 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeecCC
Confidence 9999999999999988654 2222222 246789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+|||++.+|.+||+|||++..+......... ... ..........+. ......
T Consensus 127 lKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~-----------~~~--------~~~~~~~~~~~~----~~~~~~-- 181 (382)
T cd05625 127 IKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY-----------QSG--------DHVRQDSMDFSN----EWGDPA-- 181 (382)
T ss_pred CCHHHEEECCCCCEEEeECCCCcccccccccccc-----------ccc--------cccccccccccc----cccccc--
Confidence 9999999999999999999998543211100000 000 000000000000 000000
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.....+...................+.+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+
T Consensus 182 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~ 255 (382)
T cd05625 182 ------NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLE 255 (382)
T ss_pred ------cccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHH
Confidence 00000000000000000011112345689999999999999999999999999999999999999999988877
Q ss_pred HHHHHhcCCC--CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccc-ccCCCCCCCC
Q 010140 405 TLINILKKPL--TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL-IRSIKPPEVP 481 (517)
Q Consensus 405 ~~~~i~~~~~--~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~-~~~~~p~~~~ 481 (517)
...++..... .+|.... ...++.+||.+|+ .||.+|++. ..+.|+++||||++++|.. +....+|..|
T Consensus 256 ~~~~i~~~~~~~~~p~~~~-------~s~~~~~li~~l~-~~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~ 326 (382)
T cd05625 256 TQMKVINWQTSLHIPPQAK-------LSPEASDLIIKLC-RGPEDRLGK-NGADEIKAHPFFKTIDFSSDLRQQSAPYIP 326 (382)
T ss_pred HHHHHHccCCCcCCCCccc-------CCHHHHHHHHHHc-cCHhHcCCC-CCHHHHhcCCCcCCcChHHHHhcCCCCccC
Confidence 7777765332 2222111 1235889999987 599999983 3455999999999999985 4555666655
Q ss_pred C
Q 010140 482 N 482 (517)
Q Consensus 482 ~ 482 (517)
.
T Consensus 327 ~ 327 (382)
T cd05625 327 K 327 (382)
T ss_pred c
Confidence 4
No 42
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3e-49 Score=395.56 Aligned_cols=276 Identities=36% Similarity=0.677 Sum_probs=227.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCce
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHY 163 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 163 (517)
+|++++.||+|+||.||+|+++. +++.||||++.+..............|..++..+ +|++|+++++++...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE
Confidence 58999999999999999999886 6789999999876554444555666788888877 68999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||+++|+|..++.... .+.+.. ++.++.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~--~~~~~~----------------------------~~~~~~qi~~aL~~LH~~~ivHr 125 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG--RFKEPH----------------------------AVFYAAEIAIGLFFLHSKGIIYR 125 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEEec
Confidence 999999999999998886542 233222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+++.....
T Consensus 126 Dlkp~Nill~~~~~~kL~DfG~~~~~~~~--------------------------------------------------- 154 (323)
T cd05616 126 DLKLDNVMLDSEGHIKIADFGMCKENMWD--------------------------------------------------- 154 (323)
T ss_pred CCCHHHeEECCCCcEEEccCCCceecCCC---------------------------------------------------
Confidence 99999999999999999999998421100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 155 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~ 207 (323)
T cd05616 155 ---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 207 (323)
T ss_pred ---------------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH
Confidence 01122457999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
..+..+......+|... ..++.+||.+||+.||.+|++.. ....++++||||+.++|..+. .+.||+.
T Consensus 208 ~~~~~i~~~~~~~p~~~---------s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05616 208 ELFQSIMEHNVAYPKSM---------SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYK 278 (323)
T ss_pred HHHHHHHhCCCCCCCcC---------CHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcC
Confidence 88888887766655421 22589999999999999999974 235699999999999999774 4556665
Q ss_pred CC
Q 010140 481 PN 482 (517)
Q Consensus 481 ~~ 482 (517)
|.
T Consensus 279 ~~ 280 (323)
T cd05616 279 PK 280 (323)
T ss_pred Cc
Confidence 54
No 43
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2e-49 Score=396.97 Aligned_cols=276 Identities=36% Similarity=0.685 Sum_probs=225.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCC-CCccceeeeeecCce
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH-PFLPTLYAEFEASHY 163 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~ 163 (517)
+|++++.||+|+||.||+|+++. +++.||||++.+...........+..|+.++..+.| ++|+++++++...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE
Confidence 58999999999999999999886 678899999987755444556677789999999976 468899999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||++||+|..++.... .+.+... +.++.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~--~~~~~~~----------------------------~~~~~qi~~al~~lH~~~ivH~ 125 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG--KFKEPHA----------------------------VFYAAEIAIGLFFLHSKGIIYR 125 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeEec
Confidence 999999999999998886542 2332222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||+++.....
T Consensus 126 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~--------------------------------------------------- 154 (324)
T cd05587 126 DLKLDNVMLDAEGHIKIADFGMCKENIFG--------------------------------------------------- 154 (324)
T ss_pred CCCHHHeEEcCCCCEEEeecCcceecCCC---------------------------------------------------
Confidence 99999999999999999999997321100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus 155 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~ 207 (324)
T cd05587 155 ---------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 207 (324)
T ss_pred ---------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 00112346999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
+.+..+......+|... ..++.+||.+||+.||.+|++.. ....++++||||+.++|..+. .+.+|..
T Consensus 208 ~~~~~i~~~~~~~~~~~---------~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~ 278 (324)
T cd05587 208 ELFQSIMEHNVSYPKSL---------SKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFK 278 (324)
T ss_pred HHHHHHHcCCCCCCCCC---------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcc
Confidence 88888887766555422 12489999999999999999974 234699999999999998773 3445544
Q ss_pred CC
Q 010140 481 PN 482 (517)
Q Consensus 481 ~~ 482 (517)
|.
T Consensus 279 ~~ 280 (324)
T cd05587 279 PK 280 (324)
T ss_pred Cc
Confidence 43
No 44
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.5e-49 Score=395.85 Aligned_cols=267 Identities=41% Similarity=0.741 Sum_probs=220.2
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||+|+||.||+|++.. +++.||+|++.+...........+.+|+.+|.+++||||+++++++...+..|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRD-----TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence 7999999999999886 67889999998765544555667788999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
+||+|.+++... ..+.+... +.++.||+.||.|||++||+||||||+|||
T Consensus 76 ~~g~L~~~l~~~--~~~~~~~~----------------------------~~~~~qi~~~l~~lH~~~i~HrDlkp~Nil 125 (312)
T cd05585 76 NGGELFHHLQRE--GRFDLSRA----------------------------RFYTAELLCALENLHKFNVIYRDLKPENIL 125 (312)
T ss_pred CCCcHHHHHHhc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeEeCCCCHHHeE
Confidence 999999988654 22333222 367899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.+||+|||+++.....
T Consensus 126 i~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------------- 146 (312)
T cd05585 126 LDYQGHIALCDFGLCKLNMKD----------------------------------------------------------- 146 (312)
T ss_pred ECCCCcEEEEECcccccCccC-----------------------------------------------------------
Confidence 999999999999998421100
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhc
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 411 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..
T Consensus 147 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~ 207 (312)
T cd05585 147 -------------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ 207 (312)
T ss_pred -------------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence 0112345799999999999999999999999999999999999999999888888888887
Q ss_pred CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc--cCCCCCCCC
Q 010140 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVP 481 (517)
Q Consensus 412 ~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~--~~~~p~~~~ 481 (517)
....+|... ..++.+||.+||..||.+||+. ..+.|+++||||+..+|..+ +...++..|
T Consensus 208 ~~~~~~~~~---------~~~~~~li~~~L~~dp~~R~~~-~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~ 269 (312)
T cd05585 208 EPLRFPDGF---------DRDAKDLLIGLLSRDPTRRLGY-NGAQEIKNHPFFSQLSWKKLLMKGIQPPFKP 269 (312)
T ss_pred CCCCCCCcC---------CHHHHHHHHHHcCCCHHHcCCC-CCHHHHHcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 766655422 1248999999999999999986 34569999999999999755 333444433
No 45
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-49 Score=406.47 Aligned_cols=322 Identities=31% Similarity=0.527 Sum_probs=226.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|+++. +++.||||++.+...........+.+|+.+|+.++||||+++++.|.+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVD-----TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-----CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCE
Confidence 479999999999999999999886 678999999987665545556778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+|||||+||+|.+++.... .++... ++.++.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~----------------------------~~~~~~qi~~al~~lH~~~ivHr 125 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG--IFEEDL----------------------------ARFYIAELTCAIESVHKMGFIHR 125 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEeC
Confidence 999999999999999986642 222222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+|..+........ + ............ .....
T Consensus 126 Dlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~----------~-~~~~~~~~~~~~-------~~~~~---------- 177 (376)
T cd05598 126 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY----------Y-QKGDHHRQDSME-------PSEEW---------- 177 (376)
T ss_pred CCCHHHEEECCCCCEEEEeCCCCccccccccccc----------c-cccccccccccc-------ccccc----------
Confidence 9999999999999999999999854321100000 0 000000000000 00000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
..........+... .............+||+.|||||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 178 ------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 250 (376)
T cd05598 178 ------SEIDRCRLKPLERR-RKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA 250 (376)
T ss_pred ------cccccccccchhhh-hhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH
Confidence 00000000000000 00000111234568999999999999999999999999999999999999999998877
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc-cCCCCCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI-RSIKPPEVPN 482 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~-~~~~p~~~~~ 482 (517)
+....+.......+..... ....++.+||.+|+ .+|.+|++. ..+.|+++||||++++|..+ +...+|.+|.
T Consensus 251 ~~~~~i~~~~~~~~~~~~~-----~~s~~~~~li~~l~-~~p~~R~~~-~t~~ell~h~~~~~~~~~~~~~~~~~~~~~~ 323 (376)
T cd05598 251 ETQLKVINWETTLHIPSQA-----KLSREASDLILRLC-CGAEDRLGK-NGADEIKAHPFFKGIDFASLIRRQKAPYIPK 323 (376)
T ss_pred HHHHHHhccCccccCCCCC-----CCCHHHHHHHHHHh-cCHhhcCCC-CCHHHHhCCCCcCCCCHHHHhhcCCCCCCCc
Confidence 7766665433222111111 12235889999977 599999932 12339999999999999977 5566666554
No 46
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-50 Score=388.92 Aligned_cols=262 Identities=31% Similarity=0.473 Sum_probs=209.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc-
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH- 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~- 162 (517)
.++...+.||+|+||.||++.+.+ ++..+|||.+...... ..+.+.+|+.+|++++|||||+++|......
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~-----~g~~~AvK~v~~~~~~---~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~ 88 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKK-----TGELMAVKSVELEDSP---TSESLEREIRILSRLNHPNIVQYYGSSSSREN 88 (313)
T ss_pred chhhhhccccCccceEEEEEEecC-----CCcceeeeeeecccch---hHHHHHHHHHHHHhCCCCCEEeeCCccccccC
Confidence 457888999999999999999987 5788999999765222 1566778999999999999999999754444
Q ss_pred -eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 163 -YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 163 -~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
.++++|||++||+|.+++....+ .++++.++ .|++||++||+|||++|||
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~----------------------------~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVR----------------------------RYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHH----------------------------HHHHHHHHHHHHHHhCCEe
Confidence 69999999999999999998765 56655444 7899999999999999999
Q ss_pred eccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 242 YRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 242 HrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
||||||+|||++. +|.+||+|||+++......
T Consensus 140 H~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~----------------------------------------------- 172 (313)
T KOG0198|consen 140 HCDIKPANILLDPSNGDVKLADFGLAKKLESKG----------------------------------------------- 172 (313)
T ss_pred ccCcccceEEEeCCCCeEEeccCcccccccccc-----------------------------------------------
Confidence 9999999999999 7999999999985433100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
........+.||+.|||||++... ....++|||||||++.||+||.+||..
T Consensus 173 ----------------------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 ----------------------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ----------------------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 001122346799999999999953 234599999999999999999999987
Q ss_pred -CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 400 -ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 400 -~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
....+.+..+.... ..|......+ .++++||.+||..||++|||+. ++|+|||.+...
T Consensus 225 ~~~~~~~~~~ig~~~-~~P~ip~~ls------~~a~~Fl~~C~~~~p~~Rpta~----eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 225 FFEEAEALLLIGRED-SLPEIPDSLS------DEAKDFLRKCFKRDPEKRPTAE----ELLEHPFLKQNS 283 (313)
T ss_pred hcchHHHHHHHhccC-CCCCCCcccC------HHHHHHHHHHhhcCcccCcCHH----HHhhChhhhccc
Confidence 45555555665544 2232222222 2589999999999999999998 999999997644
No 47
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.4e-49 Score=399.10 Aligned_cols=306 Identities=32% Similarity=0.583 Sum_probs=227.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|+++. +++.||||++.+...........+..|+.++..++||||+++++.+.+.+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKD-----TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 479999999999999999999887 678999999987655555566778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|||||||+||+|.+++... ..+++.. ++.|+.||+.||+|||++||+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~----------------------------~~~~~~qi~~~L~~lH~~givHr 125 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKK--DTLSEEA----------------------------TQFYIAETVLAIDAIHQLGFIHR 125 (360)
T ss_pred EEEEEeCCCCccHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEcc
Confidence 99999999999999988654 2233222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||+++.+........ +...... .+....+..... .
T Consensus 126 DLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~----------~~~~~~~------~~~~~~~~~~~~-----~----- 179 (360)
T cd05627 126 DIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF----------YRNLTHN------PPSDFSFQNMNS-----K----- 179 (360)
T ss_pred CCCHHHEEECCCCCEEEeeccCCccccccccccc----------ccccccC------Cccccccccccc-----c-----
Confidence 9999999999999999999999864431110000 0000000 000000000000 0
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.................+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..
T Consensus 180 -----------------~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~ 242 (360)
T cd05627 180 -----------------RKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242 (360)
T ss_pred -----------------cccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHH
Confidence 000000000111223568999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCC
Q 010140 404 KTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIK 476 (517)
Q Consensus 404 ~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~ 476 (517)
..+.++.... ..+|.... ...++++||.+|+. ||.+|++. ..+.|+++||||++++|..+....
T Consensus 243 ~~~~~i~~~~~~~~~p~~~~-------~s~~~~~li~~l~~-~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~ 308 (360)
T cd05627 243 ETYRKVMNWKETLVFPPEVP-------ISEKAKDLILRFCT-DSENRIGS-NGVEEIKSHPFFEGVDWGHIRERP 308 (360)
T ss_pred HHHHHHHcCCCceecCCCCC-------CCHHHHHHHHHhcc-ChhhcCCC-CCHHHHhcCCCCCCCCHHHHhcCC
Confidence 8887777532 23332211 12258999999874 99999986 356699999999999999886544
No 48
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3e-49 Score=404.40 Aligned_cols=321 Identities=31% Similarity=0.500 Sum_probs=225.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|++++.||+|+||+||+|+++. +++.||||++.+...........+..|+.+|+.++||||+++++++.+.+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVD-----THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEE
Confidence 69999999999999999999887 6789999999877665556677888899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+|||||+||+|.+++.... .+++.. ++.++.||+.||+|||++||+|||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~----------------------------~~~~~~qi~~aL~~LH~~givHrD 126 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME--VFPEVL----------------------------ARFYIAELTLAIESVHKMGFIHRD 126 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeeecC
Confidence 99999999999999886642 222222 246789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||||+.+|++||+|||+++.+......... ..........+.+...+ ......
T Consensus 127 lKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~------------~~~~~~ 183 (381)
T cd05626 127 IKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY-----------QKGSHIRQDSMEPSDLW------------DDVSNC 183 (381)
T ss_pred CcHHHEEECCCCCEEEeeCcCCcccccccccccc-----------cccccccccccCccccc------------cccccc
Confidence 9999999999999999999998543211100000 00000000000000000 000000
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
...... ..+.. ............+.+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+
T Consensus 184 ~~~~~~-------~~~~~-~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~ 255 (381)
T cd05626 184 RCGDRL-------KTLEQ-RATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE 255 (381)
T ss_pred cccccc-------chhhc-cccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH
Confidence 000000 00000 0000001112345689999999999999889999999999999999999999999888777
Q ss_pred HHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhcc--CCcccccCCCCChHHhhcCCCcCCCCcccc-cCCCCCC
Q 010140 405 TLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLV--KNPKKRIGSLKGSVEIKRHEFFKGINWALI-RSIKPPE 479 (517)
Q Consensus 405 ~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~--~dP~~R~t~~~~~~ell~hp~f~~~~~~~~-~~~~p~~ 479 (517)
....+.... ..+|.... ...++.+||.+||. .++..|+++. ++++||||++++|... +...+|.
T Consensus 256 ~~~~i~~~~~~~~~~~~~~-------~s~~~~dli~~ll~~~~~~~~R~~~~----~~l~hp~f~~~~~~~~~~~~~~~~ 324 (381)
T cd05626 256 TQLKVINWENTLHIPPQVK-------LSPEAVDLITKLCCSAEERLGRNGAD----DIKAHPFFSEVDFSSDIRTQPAPY 324 (381)
T ss_pred HHHHHHccccccCCCCCCC-------CCHHHHHHHHHHccCcccccCCCCHH----HHhcCcccCCCChhHHhhcCCCCc
Confidence 666665432 22332111 12358999999664 4555599987 9999999999999864 4555566
Q ss_pred CCC
Q 010140 480 VPN 482 (517)
Q Consensus 480 ~~~ 482 (517)
.|.
T Consensus 325 ~p~ 327 (381)
T cd05626 325 VPK 327 (381)
T ss_pred cCc
Confidence 554
No 49
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-49 Score=402.42 Aligned_cols=303 Identities=38% Similarity=0.650 Sum_probs=233.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|++.. +++.||||++.+...........+..|+.++..++||||+++++++.++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKD-----TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECC-----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCe
Confidence 479999999999999999999886 678999999987765554566778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||++||+|.+++... ..++.... +.++.||+.||+|||++||+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~----------------------------~~i~~qi~~aL~~LH~~giiH~ 125 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK--DVFPEETA----------------------------RFYIAELVLALDSVHKLGFIHR 125 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeecc
Confidence 99999999999999998764 23333222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||++............... .....+ .. .
T Consensus 126 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~---------~~~~~~---~~---------------~------ 172 (350)
T cd05573 126 DIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLND---------SHNLLF---RD---------------N------ 172 (350)
T ss_pred CCCHHHeEECCCCCEEeecCCCCccCcccCcccccccc---------cccccc---cc---------------c------
Confidence 99999999999999999999998654322110000000 000000 00 0
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.... ...............||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 173 -------------~~~~---~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 173 -------------VLVR---RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred -------------cccc---ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 0000 000000011233457999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhc--CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccC-CCCChHHhhcCCCcCCCCcccccCCCCCCC
Q 010140 404 KTLINILK--KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG-SLKGSVEIKRHEFFKGINWALIRSIKPPEV 480 (517)
Q Consensus 404 ~~~~~i~~--~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t-~~~~~~ell~hp~f~~~~~~~~~~~~p~~~ 480 (517)
....++.. ....+|.... ...++.+||.+||. ||.+|++ +. ++++||||++++|+......||.+
T Consensus 237 ~~~~~i~~~~~~~~~p~~~~-------~~~~~~~li~~ll~-dp~~R~~s~~----~ll~hp~~~~~~~~~~~~~~~~~~ 304 (350)
T cd05573 237 ETYNKIINWKESLRFPPDPP-------VSPEAIDLICRLLC-DPEDRLGSFE----EIKSHPFFKGIDWENLRETKPPFV 304 (350)
T ss_pred HHHHHHhccCCcccCCCCCC-------CCHHHHHHHHHHcc-ChhhcCCCHH----HHhcCCCcCCCCHHHHhhCCCCcC
Confidence 77777776 3333333221 12358999999997 9999999 77 999999999999998888778776
Q ss_pred CC
Q 010140 481 PN 482 (517)
Q Consensus 481 ~~ 482 (517)
|.
T Consensus 305 ~~ 306 (350)
T cd05573 305 PE 306 (350)
T ss_pred CC
Confidence 65
No 50
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-50 Score=401.11 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=215.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
...|....+||+|+.|.||.|+... +++.||||.+...... ..+-+..|+.+|+..+|+|||++++.|-..+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~-----~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d 343 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKIS-----TKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYLVGD 343 (550)
T ss_pred hhhhcchhhhccccccceeeeeecc-----CCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhcccc
Confidence 4679999999999999999999887 6778999999766433 2345667999999999999999999999889
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|+||||++||+|.+.+.... +.+.++..++++++.||+|||.+||||
T Consensus 344 eLWVVMEym~ggsLTDvVt~~~-------------------------------~~E~qIA~Icre~l~aL~fLH~~gIiH 392 (550)
T KOG0578|consen 344 ELWVVMEYMEGGSLTDVVTKTR-------------------------------MTEGQIAAICREILQGLKFLHARGIIH 392 (550)
T ss_pred eeEEEEeecCCCchhhhhhccc-------------------------------ccHHHHHHHHHHHHHHHHHHHhcceee
Confidence 9999999999999988776531 223344578899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
||||.+|||++.+|.+||+|||++..+...
T Consensus 393 rDIKSDnILL~~~g~vKltDFGFcaqi~~~-------------------------------------------------- 422 (550)
T KOG0578|consen 393 RDIKSDNILLTMDGSVKLTDFGFCAQISEE-------------------------------------------------- 422 (550)
T ss_pred eccccceeEeccCCcEEEeeeeeeeccccc--------------------------------------------------
Confidence 999999999999999999999998543311
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
..+..+.+|||+|||||++....|++++||||||++++||+-|++||..+++
T Consensus 423 ----------------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P 474 (550)
T KOG0578|consen 423 ----------------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP 474 (550)
T ss_pred ----------------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh
Confidence 1234567899999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
...+..|............. .+..++|||.+||+.|+++|+++. |||+||||+.
T Consensus 475 lrAlyLIa~ng~P~lk~~~k------lS~~~kdFL~~cL~~dv~~RasA~----eLL~HpFl~~ 528 (550)
T KOG0578|consen 475 LRALYLIATNGTPKLKNPEK------LSPELKDFLDRCLVVDVEQRASAK----ELLEHPFLKM 528 (550)
T ss_pred HHHHHHHhhcCCCCcCCccc------cCHHHHHHHHHHhhcchhcCCCHH----HHhcChhhhh
Confidence 88887777644322222222 223599999999999999999998 9999999953
No 51
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-49 Score=396.84 Aligned_cols=269 Identities=41% Similarity=0.722 Sum_probs=218.9
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+|+.++||||+++++++..++.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKA-----SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence 469999999999999886 678999999987655545556777889999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++|+|..++... ..+.+.. ++.++.||+.||+|||++||+||||||+|
T Consensus 76 y~~~g~L~~~l~~~--~~l~~~~----------------------------~~~~~~qi~~aL~~LH~~~ivHrDikp~N 125 (328)
T cd05593 76 YVNGGELFFHLSRE--RVFSEDR----------------------------TRFYGAEIVSALDYLHSGKIVYRDLKLEN 125 (328)
T ss_pred CCCCCCHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeEecccCHHH
Confidence 99999998887653 2232222 23678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.....
T Consensus 126 Ill~~~~~~kL~DfG~~~~~~~~--------------------------------------------------------- 148 (328)
T cd05593 126 LMLDKDGHIKITDFGLCKEGITD--------------------------------------------------------- 148 (328)
T ss_pred eEECCCCcEEEecCcCCccCCCc---------------------------------------------------------
Confidence 99999999999999997421100
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i 409 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+
T Consensus 149 ---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~ 207 (328)
T cd05593 149 ---------------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 207 (328)
T ss_pred ---------------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh
Confidence 00112347999999999999888999999999999999999999999988887777777
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
......+|... ..++.+||.+||+.||++|++.. ..+.|+++||||.+++|..+. ...||..
T Consensus 208 ~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~ 272 (328)
T cd05593 208 LMEDIKFPRTL---------SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFK 272 (328)
T ss_pred ccCCccCCCCC---------CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcC
Confidence 66665555321 22589999999999999998432 234599999999999998663 3344443
No 52
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-49 Score=397.90 Aligned_cols=263 Identities=35% Similarity=0.572 Sum_probs=229.5
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecC
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~ 161 (517)
.+.|++.+.||+|.||.||+|+.+. +++.||+|++.+...........+.+|+.||+++. |||||.++++|++.
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~-----tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKS-----TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecC-----CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 4679999999999999999999997 68899999999887655555677888999999998 99999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
..+|+|||+|.||+|++.+... .+++..+. .+++||+.|+.|||+.||+
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~----------------------------~~~~~il~av~~lH~~gvv 157 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK---HYSERDAA----------------------------GIIRQILEAVKYLHSLGVV 157 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc---cCCHHHHH----------------------------HHHHHHHHHHHHHHhCCce
Confidence 9999999999999999998775 24443333 6789999999999999999
Q ss_pred eccCCCCceEEcc----CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 242 YRDLKPENVLVRE----DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 242 HrDLKp~NILl~~----~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||||||+|+|+.. ++.+|++|||++.....
T Consensus 158 HrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~---------------------------------------------- 191 (382)
T KOG0032|consen 158 HRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP---------------------------------------------- 191 (382)
T ss_pred eccCCHHHeeeccccCCCCcEEEeeCCCceEccC----------------------------------------------
Confidence 9999999999963 35799999999854331
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
.......+||+.|+|||++.+..|+..+||||+||++|.|++|.+||
T Consensus 192 ---------------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF 238 (382)
T KOG0032|consen 192 ---------------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPF 238 (382)
T ss_pred ---------------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCC
Confidence 22345679999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
.+.+......+|..+.+.++...+.... ..+++||.+||..||.+|+++. ++|+|||+++..-
T Consensus 239 ~~~~~~~~~~~i~~~~~~f~~~~w~~is-----~~akd~i~~ll~~dp~~R~ta~----~~L~HpWi~~~~~ 301 (382)
T KOG0032|consen 239 WGETEFEIFLAILRGDFDFTSEPWDDIS-----ESAKDFIRKLLEFDPRKRLTAA----QALQHPWIKSIGE 301 (382)
T ss_pred cCCChhHHHHHHHcCCCCCCCCCccccC-----HHHHHHHHHhcccCcccCCCHH----HHhcCccccCCcc
Confidence 9999999999999998877766655433 3599999999999999999998 9999999987543
No 53
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.2e-49 Score=399.66 Aligned_cols=281 Identities=36% Similarity=0.617 Sum_probs=226.9
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
..++..++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+..|+.+++.++||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~ 111 (370)
T cd05596 37 KLRMKAEDFDVIKVIGRGAFGEVQLVRHKS-----SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYA 111 (370)
T ss_pred cCCCCHHHcEEEEEEeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 455677899999999999999999999886 678999999987655444455567789999999999999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+.+++.+|+|||||+||+|.+++... .+++... +.++.||+.||+|||+
T Consensus 112 ~~~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~----------------------------~~~~~qi~~aL~~LH~ 160 (370)
T cd05596 112 FQDDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWA----------------------------RFYTAEVVLALDAIHS 160 (370)
T ss_pred EecCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 99999999999999999999988653 2322222 3677899999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+||+||||||+|||++.+|.+||+|||++.......
T Consensus 161 ~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~-------------------------------------------- 196 (370)
T cd05596 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG-------------------------------------------- 196 (370)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC--------------------------------------------
Confidence 999999999999999999999999999984322100
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC----CCCccchHHHHHHHHHHHhhC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ----GHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~----~~~~~~DiWSlGvil~elltG 393 (517)
.......+||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 197 ---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG 243 (370)
T cd05596 197 ---------------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 243 (370)
T ss_pred ---------------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhC
Confidence 0011234799999999999754 378899999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCccc--ccCCCCChHHhhcCCCcCCCCc
Q 010140 394 TTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK--RIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~--R~t~~~~~~ell~hp~f~~~~~ 469 (517)
.+||.+.+....+.++.... ..+|... ..+.++.+||.+||+.+|.+ |+++. |+++||||++.+|
T Consensus 244 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-------~~s~~~~~li~~~L~~~p~r~~R~s~~----ell~h~~~~~~~~ 312 (370)
T cd05596 244 DTPFYADSLVGTYSKIMDHKNSLTFPDDI-------EISKQAKDLICAFLTDREVRLGRNGVD----EIKSHPFFKNDQW 312 (370)
T ss_pred CCCcCCCCHHHHHHHHHcCCCcCCCCCcC-------CCCHHHHHHHHHHccChhhccCCCCHH----HHhcCcccCCCCh
Confidence 99999988888888887643 2333211 12235899999999999987 99887 9999999999888
Q ss_pred cc--ccCCCCCCCCC
Q 010140 470 AL--IRSIKPPEVPN 482 (517)
Q Consensus 470 ~~--~~~~~p~~~~~ 482 (517)
.. ++...+|.+|.
T Consensus 313 ~~~~~~~~~~~~~p~ 327 (370)
T cd05596 313 TFDNIRETVAPVVPE 327 (370)
T ss_pred hhHHhcCCCcCccCc
Confidence 73 45556666554
No 54
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8e-49 Score=398.97 Aligned_cols=281 Identities=35% Similarity=0.637 Sum_probs=223.1
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
......++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~ 111 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKS-----SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA 111 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 445667899999999999999999999986 678999999987554444445567789999999999999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+.++..+|+|||||+||+|.+++... .++.... +.++.||+.||+|||+
T Consensus 112 ~~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~----------------------------~~~~~qil~aL~~LH~ 160 (370)
T cd05621 112 FQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWA----------------------------KFYTAEVVLALDAIHS 160 (370)
T ss_pred EEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 99999999999999999999988653 2332222 3678999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+||+||||||+|||++.++.+||+|||+++......
T Consensus 161 ~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~-------------------------------------------- 196 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-------------------------------------------- 196 (370)
T ss_pred CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--------------------------------------------
Confidence 999999999999999999999999999984322100
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC----CCccchHHHHHHHHHHHhhC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~----~~~~~DiWSlGvil~elltG 393 (517)
.......+||+.|+|||++.+.. ++.++|||||||++|+|++|
T Consensus 197 ---------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G 243 (370)
T cd05621 197 ---------------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 243 (370)
T ss_pred ---------------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhC
Confidence 00113457999999999997643 78899999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCccc--ccCCCCChHHhhcCCCcCCCCc
Q 010140 394 TTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK--RIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~--R~t~~~~~~ell~hp~f~~~~~ 469 (517)
..||.+.+....+.++.... ..+|... .....+++||.+||..++.+ |+++. |+++||||+..+|
T Consensus 244 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~-------~~s~~~~~li~~~L~~~~~r~~R~~~~----e~l~hp~~~~~~~ 312 (370)
T cd05621 244 DTPFYADSLVGTYSKIMDHKNSLNFPEDV-------EISKHAKNLICAFLTDREVRLGRNGVE----EIKQHPFFKNDQW 312 (370)
T ss_pred CCCCCCCCHHHHHHHHHhCCcccCCCCcc-------cCCHHHHHHHHHHccCchhccCCCCHH----HHhcCcccCCCCc
Confidence 99999988888888887643 2333211 12235899999999855433 66776 9999999998655
Q ss_pred c--cccCCCCCCCCC
Q 010140 470 A--LIRSIKPPEVPN 482 (517)
Q Consensus 470 ~--~~~~~~p~~~~~ 482 (517)
. .++...+|..|.
T Consensus 313 ~~~~~~~~~~~~~p~ 327 (370)
T cd05621 313 NWDNIRETAAPVVPE 327 (370)
T ss_pred ChHhcCCCCCCcCCC
Confidence 4 555666676665
No 55
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.9e-48 Score=389.65 Aligned_cols=276 Identities=36% Similarity=0.689 Sum_probs=226.4
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCce
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHY 163 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~ 163 (517)
+|++.+.||+|+||.||+|+++. +++.||||++.+...........+..|..++..+. |++|+++++++...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE
Confidence 47899999999999999999886 67899999998765544455566777888988885 6788899999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||++||+|..++... ..+++..+ +.++.||+.||+|||++||+||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~----------------------------~~i~~qi~~al~~lH~~~ivHr 125 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQV--GKFKEPQA----------------------------VFYAAEISVGLFFLHRRGIIYR 125 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeecc
Confidence 99999999999999888654 22333222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+++.....
T Consensus 126 Dikp~Nill~~~~~ikL~Dfg~~~~~~~~--------------------------------------------------- 154 (323)
T cd05615 126 DLKLDNVMLDSEGHIKIADFGMCKEHMVD--------------------------------------------------- 154 (323)
T ss_pred CCCHHHeEECCCCCEEEeccccccccCCC---------------------------------------------------
Confidence 99999999999999999999997421100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 155 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~ 207 (323)
T cd05615 155 ---------------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 207 (323)
T ss_pred ---------------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 00122346999999999999988999999999999999999999999999888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
.....+......+|... ..++.+|+.+||+.||.+|++..+ ...++++||||+.++|..+. .+.+|+.
T Consensus 208 ~~~~~i~~~~~~~p~~~---------~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05615 208 ELFQSIMEHNVSYPKSL---------SKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFK 278 (323)
T ss_pred HHHHHHHhCCCCCCccC---------CHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCcc
Confidence 88888887766555322 124899999999999999999753 45799999999999999774 3556665
Q ss_pred CC
Q 010140 481 PN 482 (517)
Q Consensus 481 ~~ 482 (517)
|.
T Consensus 279 ~~ 280 (323)
T cd05615 279 PK 280 (323)
T ss_pred Cc
Confidence 54
No 56
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.7e-49 Score=393.98 Aligned_cols=269 Identities=39% Similarity=0.696 Sum_probs=219.3
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKA-----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence 469999999999999876 678999999987755545556677789999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++|+|..++... ..+.+.. ++.++.||+.||+|||++||+||||||+|
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~----------------------------~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N 125 (323)
T cd05595 76 YANGGELFFHLSRE--RVFTEER----------------------------ARFYGAEIVSALEYLHSRDVVYRDIKLEN 125 (323)
T ss_pred CCCCCcHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence 99999998887653 2232222 24678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.....
T Consensus 126 Ill~~~~~~kL~Dfg~~~~~~~~--------------------------------------------------------- 148 (323)
T cd05595 126 LMLDKDGHIKITDFGLCKEGISD--------------------------------------------------------- 148 (323)
T ss_pred EEEcCCCCEEecccHHhccccCC---------------------------------------------------------
Confidence 99999999999999987321100
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i 409 (517)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+
T Consensus 149 ---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~ 207 (323)
T cd05595 149 ---------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 207 (323)
T ss_pred ---------------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 00112346999999999999988999999999999999999999999988888887777
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
......+|... ..++.+||.+||+.||.+|++.. ..+.++++||||.+++|..+. ...||..
T Consensus 208 ~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~ 272 (323)
T cd05595 208 LMEEIRFPRTL---------SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 272 (323)
T ss_pred hcCCCCCCCCC---------CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcC
Confidence 76665555321 22589999999999999999542 235699999999999998663 2344443
No 57
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.5e-49 Score=394.90 Aligned_cols=276 Identities=38% Similarity=0.647 Sum_probs=226.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|.+.+.||+|+||.||+|+++. +++.||||++++...........+..|+.+++.++||||+++++++.+.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKA-----TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCe
Confidence 479999999999999999999886 678999999987765445566677889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++||+|.+++.... ..+++... +.++.||+.||.|||++||+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~----------------------------~~~~~qi~~aL~~lH~~~i~H~ 126 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMA----------------------------QFYLAELVLAIHSVHQMGYVHR 126 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeEcc
Confidence 999999999999999987642 22332222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||++..+.....
T Consensus 127 Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~------------------------------------------------- 157 (330)
T cd05601 127 DIKPENVLIDRTGHIKLADFGSAARLTANKM------------------------------------------------- 157 (330)
T ss_pred cCchHheEECCCCCEEeccCCCCeECCCCCc-------------------------------------------------
Confidence 9999999999999999999999843321000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc------CCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS------GQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~------~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
.......||+.|+|||++. +..++.++|||||||++|||++|..||
T Consensus 158 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf 209 (330)
T cd05601 158 ----------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209 (330)
T ss_pred ----------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCC
Confidence 0012236899999999987 455789999999999999999999999
Q ss_pred CCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCC
Q 010140 398 KGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSI 475 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~ 475 (517)
...+....+.++.... ..+|... ....++.+||.+||. ||.+||++. ++++||||+.++|..+...
T Consensus 210 ~~~~~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~li~~ll~-~p~~R~t~~----~l~~h~~~~~~~~~~~~~~ 277 (330)
T cd05601 210 HEGTSAKTYNNIMNFQRFLKFPEDP-------KVSSDFLDLIQSLLC-GQKERLGYE----GLCCHPFFSKIDWNNIRNS 277 (330)
T ss_pred CCCCHHHHHHHHHcCCCccCCCCCC-------CCCHHHHHHHHHHcc-ChhhCCCHH----HHhCCCCcCCCCHHHHhhC
Confidence 9888877777776543 2222211 112358999999998 999999998 9999999999999999887
Q ss_pred CCCCCCC
Q 010140 476 KPPEVPN 482 (517)
Q Consensus 476 ~p~~~~~ 482 (517)
.||..|.
T Consensus 278 ~~~~~~~ 284 (330)
T cd05601 278 LPPFVPT 284 (330)
T ss_pred CCCccCc
Confidence 7776665
No 58
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-51 Score=370.68 Aligned_cols=271 Identities=29% Similarity=0.444 Sum_probs=226.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH-----HHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL-----AIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
+.|.-.+.||+|..++|.+|.++. +++.+|+|++..... ......+.-..|+.||+++ .||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~-----t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKE-----TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcc-----cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 467888899999999999999887 677889998853211 1234455566799999998 79999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
|+.+..+++|+|.|+.|.|++++... -. +++...|.+|+||+.|++|||.
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~--Vt----------------------------lSEK~tR~iMrqlfegVeylHa 141 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSK--VT----------------------------LSEKETRRIMRQLFEGVEYLHA 141 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhh--ee----------------------------ecHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998763 11 2334456899999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
++||||||||+|||++++.++||+|||+|..+..
T Consensus 142 ~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~---------------------------------------------- 175 (411)
T KOG0599|consen 142 RNIVHRDLKPENILLDDNMNIKISDFGFACQLEP---------------------------------------------- 175 (411)
T ss_pred hhhhhcccChhheeeccccceEEeccceeeccCC----------------------------------------------
Confidence 9999999999999999999999999999955432
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC------CCCCccchHHHHHHHHHHHh
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG------QGHGSAVDWWTLGVFLYEML 391 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~------~~~~~~~DiWSlGvil~ell 391 (517)
+.+....||||+|+|||.+.. .+|+..+|+||+|||||.|+
T Consensus 176 ---------------------------------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL 222 (411)
T KOG0599|consen 176 ---------------------------------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL 222 (411)
T ss_pred ---------------------------------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence 233456799999999999864 25888999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccc
Q 010140 392 YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL 471 (517)
Q Consensus 392 tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~ 471 (517)
.|.+||......-++..|+.+.+.|....+.. .+.+.+|||.+||+.||.+|+|+. |+|+||||..+-...
T Consensus 223 aGcpPFwHRkQmlMLR~ImeGkyqF~speWad-----is~~~KdLIsrlLqVdp~~Ritak----e~LaHpff~q~~~~~ 293 (411)
T KOG0599|consen 223 AGCPPFWHRKQMLMLRMIMEGKYQFRSPEWAD-----ISATVKDLISRLLQVDPTKRITAK----EALAHPFFIQIAQQQ 293 (411)
T ss_pred cCCCchhHHHHHHHHHHHHhcccccCCcchhh-----ccccHHHHHHHHHeeCchhcccHH----HHhcChHHHHHHHhc
Confidence 99999999888888999999998886544333 334689999999999999999998 999999998776666
Q ss_pred ccCCCC
Q 010140 472 IRSIKP 477 (517)
Q Consensus 472 ~~~~~p 477 (517)
.+.+.|
T Consensus 294 ~r~msP 299 (411)
T KOG0599|consen 294 ARQMSP 299 (411)
T ss_pred ccccCC
Confidence 666655
No 59
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-48 Score=391.35 Aligned_cols=271 Identities=40% Similarity=0.695 Sum_probs=219.8
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHH-HHHhcCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||+||+|+++. +++.||||++.+...........+..|.. +++.++||||+++++++...+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKA-----DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 469999999999999886 67899999998765544444445555554 567799999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+.+.. .+.++.||+.||+|||++||+||||||+
T Consensus 76 e~~~~g~L~~~l~~~--~~~~~~~----------------------------~~~~~~qi~~~l~~lH~~givH~dikp~ 125 (323)
T cd05575 76 DYVNGGELFFHLQRE--RSFPEPR----------------------------ARFYAAEIASALGYLHSLNIIYRDLKPE 125 (323)
T ss_pred cCCCCCCHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEeCCCCHH
Confidence 999999999888653 2232222 2367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.+|.+||+|||+++.....
T Consensus 126 NIll~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------------- 149 (323)
T cd05575 126 NILLDSQGHVVLTDFGLCKEGIEH-------------------------------------------------------- 149 (323)
T ss_pred HeEECCCCcEEEeccCCCcccccC--------------------------------------------------------
Confidence 999999999999999997321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~ 207 (323)
T cd05575 150 ----------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDN 207 (323)
T ss_pred ----------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence 0112234699999999999998999999999999999999999999999888888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccccc--CCCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVPN 482 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~--~~~p~~~~~ 482 (517)
+.......+... ...+.+||.+||+.||.+||++...+.++++||||+.++|..+. .+.+|..|.
T Consensus 208 i~~~~~~~~~~~---------~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05575 208 ILNKPLRLKPNI---------SVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNPN 274 (323)
T ss_pred HHcCCCCCCCCC---------CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCC
Confidence 877655444321 12489999999999999999998788899999999999998773 345555443
No 60
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.1e-49 Score=392.07 Aligned_cols=270 Identities=37% Similarity=0.724 Sum_probs=220.3
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. +++.||||++.+...........+..|..++..+ +||||++++++|..++.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKG-----TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECC-----CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence 469999999999999876 6789999999876554445556667788888876 8999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||+++|+|..++... ..+.+... +.++.||+.||.|||++||+||||||+
T Consensus 76 E~~~~~~L~~~l~~~--~~~~~~~~----------------------------~~~~~qi~~aL~~LH~~~ivHrDikp~ 125 (321)
T cd05591 76 EYVNGGDLMFQIQRS--RKFDEPRS----------------------------RFYAAEVTLALMFLHRHGVIYRDLKLD 125 (321)
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence 999999999888654 22332222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.+|.+||+|||+++.....
T Consensus 126 Nill~~~~~~kL~Dfg~~~~~~~~-------------------------------------------------------- 149 (321)
T cd05591 126 NILLDAEGHCKLADFGMCKEGILN-------------------------------------------------------- 149 (321)
T ss_pred HeEECCCCCEEEeecccceecccC--------------------------------------------------------
Confidence 999999999999999997421100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~ 207 (321)
T cd05591 150 ----------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES 207 (321)
T ss_pred ----------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112234699999999999998899999999999999999999999999998888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC---ChHHhhcCCCcCCCCcccccC--CCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK---GSVEIKRHEFFKGINWALIRS--IKPPEVP 481 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~---~~~ell~hp~f~~~~~~~~~~--~~p~~~~ 481 (517)
+......+|... ..++.+||.+||+.||++|++... .+.++++||||++++|..+.. ..||..|
T Consensus 208 i~~~~~~~p~~~---------~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T cd05591 208 ILHDDVLYPVWL---------SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKP 276 (321)
T ss_pred HHcCCCCCCCCC---------CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCC
Confidence 888766555321 124899999999999999996543 456999999999999997743 3444433
No 61
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-49 Score=368.20 Aligned_cols=319 Identities=35% Similarity=0.624 Sum_probs=255.7
Q ss_pred hcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCcccee
Q 010140 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLY 155 (517)
Q Consensus 77 ~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~ 155 (517)
..+.+.+++|.++++||+|+|+.|.+++.+. +.+.||+|+++++.....+.+.-++.|..+.... +||.+|.|+
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~-----t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglh 317 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKK-----TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLH 317 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcc-----cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehh
Confidence 4456788999999999999999999999987 7899999999998877777777778888888876 799999999
Q ss_pred eeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
.+|+.+..+++|.||++||+|.-.++++ ..++++.+ |+|..+|+.||.||
T Consensus 318 scfqtesrlffvieyv~ggdlmfhmqrq--rklpeeha----------------------------rfys~ei~lal~fl 367 (593)
T KOG0695|consen 318 SCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHA----------------------------RFYSAEICLALNFL 367 (593)
T ss_pred hhhcccceEEEEEEEecCcceeeehhhh--hcCcHHHh----------------------------hhhhHHHHHHHHHH
Confidence 9999999999999999999998777665 44555544 47889999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|++|||.||||.+|+|++..|++||+|+|+++.--.
T Consensus 368 h~rgiiyrdlkldnvlldaeghikltdygmcke~l~-------------------------------------------- 403 (593)
T KOG0695|consen 368 HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG-------------------------------------------- 403 (593)
T ss_pred hhcCeeeeeccccceEEccCCceeecccchhhcCCC--------------------------------------------
Confidence 999999999999999999999999999999832100
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~ 395 (517)
....++++||||.|.|||+++|..|+..+|+|+|||+|+||+.|+.
T Consensus 404 ----------------------------------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrs 449 (593)
T KOG0695|consen 404 ----------------------------------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS 449 (593)
T ss_pred ----------------------------------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCC
Confidence 0123568899999999999999999999999999999999999999
Q ss_pred CCCC--------CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC--CChHHhhcCCCcC
Q 010140 396 PFKG--------ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFK 465 (517)
Q Consensus 396 Pf~~--------~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~--~~~~ell~hp~f~ 465 (517)
||+- .++.-+++-|+..+...|..... .+..+++..|++||.+|++.. -+..++..|+||+
T Consensus 450 pfdivgm~n~d~ntedylfqvilekqiriprslsv---------kas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr 520 (593)
T KOG0695|consen 450 PFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSV---------KASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFR 520 (593)
T ss_pred CcceecCCCcccchhHHHHHHHhhhcccccceeeh---------hhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhh
Confidence 9972 12334566677777777765433 367899999999999999864 3567999999999
Q ss_pred CCCcccc--cCCCCCCCCCCccccccc-----cccccCCCCccccCCCCCCCCCCCCCC
Q 010140 466 GINWALI--RSIKPPEVPNNDLYCKIK-----KKVYVPKLSKQERDAPYQIPTHHFDYF 517 (517)
Q Consensus 466 ~~~~~~~--~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (517)
.+||+.+ +.+.||+-|+..--.... -..-.+++.++..|+--.|-++.||-|
T Consensus 521 ~idwd~leqk~v~ppf~p~i~~d~~l~~fd~qft~e~~qltpdd~d~i~ridqsefegf 579 (593)
T KOG0695|consen 521 SIDWDLLEQKQVLPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFEGF 579 (593)
T ss_pred hCCHHHHhhcccCCCCCCccccccCccccccccccCCcccCCCCHHHHHhcchhhcCcc
Confidence 9999977 668899887632111110 012234555555555555555555543
No 62
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.8e-48 Score=388.66 Aligned_cols=267 Identities=39% Similarity=0.758 Sum_probs=215.2
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|++.. +++.||||++++..............|..++..+ +||||+++++++..++.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKG-----TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 469999999999999886 6788999999876544344445555677777654 8999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+++... +.|+.||+.||+|||++||+||||||+
T Consensus 76 e~~~gg~L~~~~~~~--~~~~~~~~----------------------------~~~~~qi~~al~~LH~~~ivH~dlkp~ 125 (316)
T cd05592 76 EYLNGGDLMFHIQSS--GRFDEARA----------------------------RFYAAEIICGLQFLHKKGIIYRDLKLD 125 (316)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 999999999888654 22333222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nill~~~~~~kL~Dfg~a~~~~~~-------------------------------------------------------- 149 (316)
T cd05592 126 NVLLDKDGHIKIADFGMCKENMNG-------------------------------------------------------- 149 (316)
T ss_pred HeEECCCCCEEEccCcCCeECCCC--------------------------------------------------------
Confidence 999999999999999998432100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~ 207 (316)
T cd05592 150 ----------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS 207 (316)
T ss_pred ----------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0112345799999999999998899999999999999999999999999888888887
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccccc--CCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVP 481 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~--~~~p~~~~ 481 (517)
+......+|... ..++.+||.+||+.||.+||++. .++++||||+.++|..+. ...|+..|
T Consensus 208 i~~~~~~~~~~~---------~~~~~~ll~~~l~~~P~~R~~~~---~~l~~h~~~~~~~~~~~~~~~~~~~~~~ 270 (316)
T cd05592 208 ILNDRPHFPRWI---------SKEAKDCLSKLFERDPTKRLGVD---GDIRQHPFFRGIDWERLEKREIPPPFKP 270 (316)
T ss_pred HHcCCCCCCCCC---------CHHHHHHHHHHccCCHHHcCCCh---HHHHcCcccCCCCHHHHHhCCCCCCcCC
Confidence 776554444321 12489999999999999999874 378899999999998763 34444444
No 63
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.1e-48 Score=388.06 Aligned_cols=268 Identities=36% Similarity=0.729 Sum_probs=215.7
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. +++.||+|++++..............|..++..+ +||||+++++++.+.+++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKG-----KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 469999999999999886 6789999999876543334445566688888764 8999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+.+..+ +.++.||+.||+|||++||+||||||+
T Consensus 76 E~~~~g~L~~~i~~~--~~~~~~~~----------------------------~~~~~qi~~~l~~lH~~~ivHrDlkp~ 125 (316)
T cd05620 76 EFLNGGDLMFHIQDK--GRFDLYRA----------------------------TFYAAEIVCGLQFLHSKGIIYRDLKLD 125 (316)
T ss_pred CCCCCCcHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 999999999888653 22333222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++....
T Consensus 126 Nil~~~~~~~kl~Dfg~~~~~~~--------------------------------------------------------- 148 (316)
T cd05620 126 NVMLDRDGHIKIADFGMCKENVF--------------------------------------------------------- 148 (316)
T ss_pred HeEECCCCCEEeCccCCCeeccc---------------------------------------------------------
Confidence 99999999999999998732110
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+....
T Consensus 149 ---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~ 207 (316)
T cd05620 149 ---------------------GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES 207 (316)
T ss_pred ---------------------CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 00112345799999999999999999999999999999999999999998888877777
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccccc--CCCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVPN 482 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~--~~~p~~~~~ 482 (517)
+......+|... ..++++||.+||+.||++|+++. .++++||||++++|..+. .+.+|..|.
T Consensus 208 ~~~~~~~~~~~~---------~~~~~~li~~~l~~dP~~R~~~~---~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05620 208 IRVDTPHYPRWI---------TKESKDILEKLFERDPTRRLGVV---GNIRGHPFFKTINWTALEKRELDPPFKPK 271 (316)
T ss_pred HHhCCCCCCCCC---------CHHHHHHHHHHccCCHHHcCCCh---HHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 766554444321 12489999999999999999984 278999999999998753 344555443
No 64
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.8e-48 Score=389.39 Aligned_cols=270 Identities=37% Similarity=0.696 Sum_probs=214.3
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. +++.||||++++...........+..|..++..+ +||||++++++|.+.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKK-----TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence 469999999999999887 6789999999877655445566677899999988 7999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
|||+||+|..++... ..+++..+ +.++.||+.||+|||++||+||||||+
T Consensus 76 e~~~~g~L~~~~~~~--~~l~~~~~----------------------------~~~~~qi~~~l~~lH~~~ivH~dlkp~ 125 (329)
T cd05588 76 EFVSGGDLMFHMQRQ--RKLPEEHA----------------------------RFYSAEISLALNFLHERGIIYRDLKLD 125 (329)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 999999998887654 23333332 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++....
T Consensus 126 Nili~~~~~~kL~Dfg~~~~~~~--------------------------------------------------------- 148 (329)
T cd05588 126 NVLLDAEGHIKLTDYGMCKEGIR--------------------------------------------------------- 148 (329)
T ss_pred HeEECCCCCEEECcCcccccccc---------------------------------------------------------
Confidence 99999999999999999732100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC-------
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------- 401 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~------- 401 (517)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 149 ---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~ 207 (329)
T cd05588 149 ---------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ 207 (329)
T ss_pred ---------------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccc
Confidence 0011234579999999999999999999999999999999999999996321
Q ss_pred --hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC--CChHHhhcCCCcCCCCcccccC--C
Q 010140 402 --NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFKGINWALIRS--I 475 (517)
Q Consensus 402 --~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~--~~~~ell~hp~f~~~~~~~~~~--~ 475 (517)
.......+.......|... ..++.+||.+||+.||.+|+++. ..+.++++||||+.++|..+.. .
T Consensus 208 ~~~~~~~~~~~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~ 278 (329)
T cd05588 208 NTEDYLFQVILEKQIRIPRSL---------SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQV 278 (329)
T ss_pred cchHHHHHHHHcCCCCCCCCC---------CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCC
Confidence 1223444555554444321 12489999999999999999863 2366999999999999987743 3
Q ss_pred CCCCCC
Q 010140 476 KPPEVP 481 (517)
Q Consensus 476 ~p~~~~ 481 (517)
.|+..|
T Consensus 279 ~~~~~~ 284 (329)
T cd05588 279 LPPYKP 284 (329)
T ss_pred CCCccc
Confidence 444433
No 65
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.4e-48 Score=393.87 Aligned_cols=284 Identities=36% Similarity=0.650 Sum_probs=224.7
Q ss_pred hcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceee
Q 010140 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA 156 (517)
Q Consensus 77 ~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~ 156 (517)
...++..++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||+++++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~ 110 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS-----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 110 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3456677999999999999999999999987 67899999998755444445566778999999999999999999
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
++.+++.+|+|||||+||+|.+++... .++.... +.++.||+.||+|||
T Consensus 111 ~~~~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~----------------------------~~~~~qi~~aL~~LH 159 (371)
T cd05622 111 AFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWA----------------------------RFYTAEVVLALDAIH 159 (371)
T ss_pred EEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHH----------------------------HHHHHHHHHHHHHHH
Confidence 999999999999999999999988653 2222222 367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.+|.+||+|||+++......
T Consensus 160 ~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~------------------------------------------- 196 (371)
T cd05622 160 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG------------------------------------------- 196 (371)
T ss_pred HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC-------------------------------------------
Confidence 9999999999999999999999999999984322100
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC----CCccchHHHHHHHHHHHhh
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLY 392 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~----~~~~~DiWSlGvil~ellt 392 (517)
.......+||+.|+|||++.+.. ++.++|||||||++|||++
T Consensus 197 ----------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~ 242 (371)
T cd05622 197 ----------------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (371)
T ss_pred ----------------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence 00112457999999999997643 7889999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC--
Q 010140 393 GTTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN-- 468 (517)
Q Consensus 393 G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~-- 468 (517)
|..||.+.+....+..+.... ..+|... .....+++||.+||. +|..|++. ..+.|+++||||++.+
T Consensus 243 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-------~~s~~~~~li~~~L~-~~~~r~~r-~~~~ei~~h~~~~~~~~~ 313 (371)
T cd05622 243 GDTPFYADSLVGTYSKIMNHKNSLTFPDDN-------DISKEAKNLICAFLT-DREVRLGR-NGVEEIKRHLFFKNDQWA 313 (371)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCcccCCCcC-------CCCHHHHHHHHHHcC-ChhhhcCC-CCHHHHhcCcccCCCChh
Confidence 999999988888888887644 2333221 112348999999998 66665432 2334999999999855
Q ss_pred cccccCCCCCCCCC
Q 010140 469 WALIRSIKPPEVPN 482 (517)
Q Consensus 469 ~~~~~~~~p~~~~~ 482 (517)
|..++...+|.+|.
T Consensus 314 ~~~~~~~~~~~~~~ 327 (371)
T cd05622 314 WETLRDTVAPVVPD 327 (371)
T ss_pred HHhcCCCCCCCCCC
Confidence 45667777777665
No 66
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.3e-48 Score=380.07 Aligned_cols=271 Identities=33% Similarity=0.587 Sum_probs=211.3
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||+|+||+||+|.++. +++.||+|.+.+...........+..|+.+++.++||||+++++++..+...|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRA-----TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEcc-----CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence 7999999999999886 67899999998766554455567778999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
+||+|..++...........+. .++.++.||+.||+|||++||+||||||+|||
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~--------------------------~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 129 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEP--------------------------RACFYTAQIISGLEHLHQRRIIYRDLKPENVL 129 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHH--------------------------HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 9999988775432211112111 22367899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.+||+|||++..+...
T Consensus 130 i~~~~~~~l~dfg~~~~~~~~----------------------------------------------------------- 150 (280)
T cd05608 130 LDNDGNVRISDLGLAVELKDG----------------------------------------------------------- 150 (280)
T ss_pred ECCCCCEEEeeCccceecCCC-----------------------------------------------------------
Confidence 999999999999998432210
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH----HHHH
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE----KTLI 407 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~----~~~~ 407 (517)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ....
T Consensus 151 -------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 211 (280)
T cd05608 151 -------------------QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 211 (280)
T ss_pred -------------------CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH
Confidence 00112346899999999999999999999999999999999999999865432 2223
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCcccccC--CCCCCC
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIRS--IKPPEV 480 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~~~--~~p~~~ 480 (517)
.+......++. ..+..+.+|+.+||+.||++||+++. .++++++||||++++|..+.. ..+|+.
T Consensus 212 ~~~~~~~~~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~ 278 (280)
T cd05608 212 RILNDSVTYPD---------KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFV 278 (280)
T ss_pred hhcccCCCCcc---------cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCC
Confidence 33333222221 12235899999999999999997653 566999999999999997633 344443
No 67
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.2e-48 Score=386.70 Aligned_cols=268 Identities=38% Similarity=0.778 Sum_probs=216.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHh-cCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. +++.||||++++..............|..++.. ++||||+++++++.+.+.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKG-----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence 469999999999999886 678899999987654433444556668888876 49999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+.+... +.++.||+.||+|||++||+||||||+
T Consensus 76 ey~~~g~L~~~l~~~--~~~~~~~~----------------------------~~~~~qi~~al~~LH~~~ivHrdikp~ 125 (316)
T cd05619 76 EYLNGGDLMFHIQSC--HKFDLPRA----------------------------TFYAAEIICGLQFLHSKGIVYRDLKLD 125 (316)
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeEeCCCCHH
Confidence 999999999988653 22333222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------------- 149 (316)
T cd05619 126 NILLDTDGHIKIADFGMCKENMLG-------------------------------------------------------- 149 (316)
T ss_pred HEEECCCCCEEEccCCcceECCCC--------------------------------------------------------
Confidence 999999999999999997321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~ 207 (316)
T cd05619 150 ----------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS 207 (316)
T ss_pred ----------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0011234699999999999998899999999999999999999999999888877777
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc--cCCCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 482 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~--~~~~p~~~~~ 482 (517)
+......+|.. . ..++++||.+||+.||++||++. .++++||||+.++|..+ +.+.||..|.
T Consensus 208 i~~~~~~~~~~---~------~~~~~~li~~~l~~~P~~R~~~~---~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05619 208 IRMDNPCYPRW---L------TREAKDILVKLFVREPERRLGVK---GDIRQHPFFREIDWSALEEREIEPPFKPK 271 (316)
T ss_pred HHhCCCCCCcc---C------CHHHHHHHHHHhccCHhhcCCCh---HHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 76655444321 1 12489999999999999999984 38999999999999976 3455665554
No 68
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.1e-48 Score=391.82 Aligned_cols=269 Identities=40% Similarity=0.708 Sum_probs=218.2
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|+++. +++.||+|++.+...........+..|+.++..++||||+++++++..++.+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKA-----TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence 469999999999999876 678999999987765544556677789999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-cCceeccCCCC
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-MGIVYRDLKPE 248 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~ 248 (517)
|++||+|..++... ..+++.. ++.++.||+.||+|||+ +||+||||||+
T Consensus 76 ~~~~~~L~~~l~~~--~~l~~~~----------------------------~~~~~~qi~~aL~~lH~~~~ivHrDikp~ 125 (325)
T cd05594 76 YANGGELFFHLSRE--RVFSEDR----------------------------ARFYGAEIVSALDYLHSEKNVVYRDLKLE 125 (325)
T ss_pred CCCCCcHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhcCCEEecCCCCC
Confidence 99999998887653 2233222 23678999999999997 79999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.+|.+||+|||+++.....
T Consensus 126 NIll~~~~~~kL~Dfg~~~~~~~~-------------------------------------------------------- 149 (325)
T cd05594 126 NLMLDKDGHIKITDFGLCKEGIKD-------------------------------------------------------- 149 (325)
T ss_pred eEEECCCCCEEEecCCCCeecCCC--------------------------------------------------------
Confidence 999999999999999997421100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~ 207 (325)
T cd05594 150 ----------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 207 (325)
T ss_pred ----------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHH
Confidence 0011234699999999999998899999999999999999999999998888877777
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
+......+|... ..++.+||.+||+.||++|++.. ..+.++++||||+++.|.... ...||..
T Consensus 208 i~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd05594 208 ILMEEIRFPRTL---------SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFK 273 (325)
T ss_pred HhcCCCCCCCCC---------CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcC
Confidence 776666555422 22589999999999999998432 234599999999999999663 3334443
No 69
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.5e-48 Score=385.52 Aligned_cols=270 Identities=40% Similarity=0.766 Sum_probs=219.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||+||+|+++. +++.||||++.+...........+..|..++..+ +||||+++++++...+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKG-----TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 469999999999999886 6788999999877655445566677788999888 7999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+++... +.++.||+.||.|||++||+||||||+
T Consensus 76 e~~~~~~L~~~~~~~--~~l~~~~~----------------------------~~~~~qi~~~l~~LH~~~ivH~dlkp~ 125 (318)
T cd05570 76 EYVNGGDLMFHIQRS--GRFDEPRA----------------------------RFYAAEIVLGLQFLHERGIIYRDLKLD 125 (318)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeEccCCCHH
Confidence 999999998887654 23333322 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nill~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------------- 149 (318)
T cd05570 126 NVLLDSEGHIKIADFGMCKEGILG-------------------------------------------------------- 149 (318)
T ss_pred HeEECCCCcEEecccCCCeecCcC--------------------------------------------------------
Confidence 999999999999999987321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......
T Consensus 150 ----------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~ 207 (318)
T cd05570 150 ----------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS 207 (318)
T ss_pred ----------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence 0111234689999999999999999999999999999999999999999888888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc--cCCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVP 481 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~--~~~~p~~~~ 481 (517)
+......+|... ...+.+||.+||+.||.+||++. ....++++||||+.++|... +...||..+
T Consensus 208 i~~~~~~~~~~~---------~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 274 (318)
T cd05570 208 ILEDEVRYPRWL---------SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKP 274 (318)
T ss_pred HHcCCCCCCCcC---------CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 877665554321 12489999999999999999982 22349999999999999865 334455443
No 70
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.5e-48 Score=386.73 Aligned_cols=270 Identities=40% Similarity=0.703 Sum_probs=218.4
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHH-HHHhcCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|++.. +++.||+|++.+...........+..|.. +++.++||||+++++++.+.+..|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKS-----DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 469999999999999886 67899999998765443344445555554 678899999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
|||+||+|...+... ..+.... ++.++.||+.||+|||++||+||||||+
T Consensus 76 e~~~~~~L~~~l~~~--~~~~~~~----------------------------~~~~~~qi~~~L~~lH~~~ivH~Dlkp~ 125 (321)
T cd05603 76 DYVNGGELFFHLQRE--RCFLEPR----------------------------ARFYAAEVASAIGYLHSLNIIYRDLKPE 125 (321)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEeccCCHH
Confidence 999999998877653 2222222 2367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.+|.+||+|||+++.....
T Consensus 126 NIll~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------------- 149 (321)
T cd05603 126 NILLDSQGHVVLTDFGLCKEGVEP-------------------------------------------------------- 149 (321)
T ss_pred HeEECCCCCEEEccCCCCccCCCC--------------------------------------------------------
Confidence 999999999999999987321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+....+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 207 (321)
T cd05603 150 ----------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDN 207 (321)
T ss_pred ----------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence 0011234799999999999988899999999999999999999999999888888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccccc--CCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVP 481 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~--~~~p~~~~ 481 (517)
+......+|... ...+.++|.+||+.||.+|+++...+.++++|+||..++|..+. ...||..+
T Consensus 208 i~~~~~~~~~~~---------~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (321)
T cd05603 208 ILHKPLQLPGGK---------TVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNP 273 (321)
T ss_pred HhcCCCCCCCCC---------CHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCC
Confidence 877765554321 12489999999999999999998788899999999999998763 34455443
No 71
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.7e-48 Score=378.39 Aligned_cols=270 Identities=34% Similarity=0.557 Sum_probs=211.5
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||+|+||.||+++.+. +++.||+|.+................|+.++++++||||++++++++.+.+.|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKN-----TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEcc-----CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence 7999999999999887 67899999997665443333444556999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
+||+|..++.......+..... ..++.||+.||+|||++||+||||||+|||
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~qi~~al~~lH~~~ivH~dikp~Nil 127 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERV----------------------------IHYSAQITCGILHLHSMDIVYRDMKPENVL 127 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCEEEccCChHhEE
Confidence 9999988876543222322222 257899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.++|+|||++......
T Consensus 128 i~~~~~~~l~Dfg~~~~~~~~----------------------------------------------------------- 148 (277)
T cd05607 128 LDDQGNCRLSDLGLAVELKDG----------------------------------------------------------- 148 (277)
T ss_pred EcCCCCEEEeeceeeeecCCC-----------------------------------------------------------
Confidence 999999999999997432210
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh----HHHHH
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN----EKTLI 407 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~----~~~~~ 407 (517)
.......||+.|+|||++.+..++.++|||||||++|||++|..||.+... .+...
T Consensus 149 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05607 149 --------------------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR 208 (277)
T ss_pred --------------------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence 001123589999999999988899999999999999999999999976533 23333
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccC--CCCCCCC
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRS--IKPPEVP 481 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~--~~p~~~~ 481 (517)
.+.......+.. . ...++++||.+||+.||++||++.+.++++++||||++++|..++. ..||++|
T Consensus 209 ~~~~~~~~~~~~--~------~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05607 209 RTLEDEVKFEHQ--N------FTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP 276 (277)
T ss_pred Hhhccccccccc--c------CCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence 333333222111 1 1225899999999999999999977777999999999999998864 4555443
No 72
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.4e-48 Score=379.57 Aligned_cols=276 Identities=34% Similarity=0.571 Sum_probs=216.9
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|++.+.||+|+||.||++.+.. +++.||+|++.............+.+|+.+++.++||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRA-----TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcC-----CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeE
Confidence 48999999999999999999876 6789999999876554444445667799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++|+|..++.......++.... +.++.||+.||.|||++||+|||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~qi~~~l~~lH~~~ivH~d 127 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERA----------------------------VFYAAEITCGLEDLHRERIVYRD 127 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCcEecC
Confidence 99999999999998876543333333332 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||+++....
T Consensus 128 lkp~Nil~~~~~~~~l~Dfg~~~~~~~----------------------------------------------------- 154 (285)
T cd05605 128 LKPENILLDDYGHIRISDLGLAVEIPE----------------------------------------------------- 154 (285)
T ss_pred CCHHHEEECCCCCEEEeeCCCceecCC-----------------------------------------------------
Confidence 999999999999999999999743210
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......+|++.|+|||++.+..++.++||||+||++|||++|..||.+.....
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~ 208 (285)
T cd05605 155 --------------------------GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV 208 (285)
T ss_pred --------------------------CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence 001123368999999999998889999999999999999999999998866543
Q ss_pred HHHHH----hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccccC--CCC
Q 010140 405 TLINI----LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIRS--IKP 477 (517)
Q Consensus 405 ~~~~i----~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~~--~~p 477 (517)
....+ ......++. .....+.+||.+||+.||++||+.. ..+.++++||||...+|..+.. +.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 279 (285)
T cd05605 209 KREEVERRVKEDQEEYSE---------KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEP 279 (285)
T ss_pred HHHHHHHHhhhcccccCc---------ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCC
Confidence 32222 222222221 1122489999999999999999532 1344999999999999997744 345
Q ss_pred CCCC
Q 010140 478 PEVP 481 (517)
Q Consensus 478 ~~~~ 481 (517)
|+.|
T Consensus 280 ~~~~ 283 (285)
T cd05605 280 PFCP 283 (285)
T ss_pred CCCC
Confidence 5544
No 73
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.9e-48 Score=386.55 Aligned_cols=270 Identities=41% Similarity=0.696 Sum_probs=216.7
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHH-HHHHhcCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK-VILTMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~-~il~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||+||+|+++. +++.||+|++.+...........+..|. .+++.++||||+++++++...+.+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKA-----EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence 469999999999999886 6788999999876543333333444444 4567889999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+... .++.++.||+.||+|||++||+||||||+
T Consensus 76 e~~~~~~L~~~~~~~--~~~~~~----------------------------~~~~~~~qi~~~L~~lH~~giiHrDlkp~ 125 (325)
T cd05602 76 DYINGGELFYHLQRE--RCFLEP----------------------------RARFYAAEIASALGYLHSLNIVYRDLKPE 125 (325)
T ss_pred eCCCCCcHHHHHHhc--CCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 999999999888653 222222 22367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nili~~~~~~kl~DfG~a~~~~~~-------------------------------------------------------- 149 (325)
T cd05602 126 NILLDSQGHIVLTDFGLCKENIEH-------------------------------------------------------- 149 (325)
T ss_pred HeEECCCCCEEEccCCCCcccccC--------------------------------------------------------
Confidence 999999999999999998421100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 207 (325)
T cd05602 150 ----------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 207 (325)
T ss_pred ----------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112345799999999999999999999999999999999999999999888888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccccc--CCCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVP 481 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~--~~~p~~~~ 481 (517)
+.......+.. ....+.+||.+||+.||.+|+++.+.+.++++|+||..++|..+. ...||..+
T Consensus 208 i~~~~~~~~~~---------~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd05602 208 ILNKPLQLKPN---------ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNP 273 (325)
T ss_pred HHhCCcCCCCC---------CCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhCCCCcCcCC
Confidence 77665443321 112489999999999999999998888899999999999999774 33444333
No 74
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.9e-48 Score=387.85 Aligned_cols=270 Identities=38% Similarity=0.673 Sum_probs=218.2
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHH-HHHhcCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||+||+|+++. +++.||+|++.+...........+..|.. +++.++||||+++++++..++.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKL-----DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence 469999999999999876 67899999998765443344445555654 567789999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+++.. ++.++.||+.||+|||++||+||||||+
T Consensus 76 e~~~~~~L~~~l~~~--~~~~~~~----------------------------~~~~~~qi~~al~~lH~~givH~Dlkp~ 125 (325)
T cd05604 76 DFVNGGELFFHLQRE--RSFPEPR----------------------------ARFYAAEIASALGYLHSINIVYRDLKPE 125 (325)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeeecCCCHH
Confidence 999999998887653 2233222 2367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.+|.+||+|||+++.....
T Consensus 126 NIll~~~~~~kL~DfG~~~~~~~~-------------------------------------------------------- 149 (325)
T cd05604 126 NILLDSQGHVVLTDFGLCKEGIAQ-------------------------------------------------------- 149 (325)
T ss_pred HeEECCCCCEEEeecCCcccCCCC--------------------------------------------------------
Confidence 999999999999999997321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~ 207 (325)
T cd05604 150 ----------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN 207 (325)
T ss_pred ----------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHH
Confidence 0012245799999999999999999999999999999999999999999888888888
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccC--CCCCCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRS--IKPPEVP 481 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~--~~p~~~~ 481 (517)
+.......+.. . ...+.++|.+||+.||.+||++...+.++++||||++++|..+.. +.+|..|
T Consensus 208 ~~~~~~~~~~~---~------~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd05604 208 ILHKPLVLRPG---A------SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNP 273 (325)
T ss_pred HHcCCccCCCC---C------CHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 87765544321 1 124889999999999999999988888999999999999987643 3444444
No 75
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8e-48 Score=386.69 Aligned_cols=278 Identities=33% Similarity=0.600 Sum_probs=221.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+++.+. +++.||+|++.+...........+..|+.++..++|+||+++++++.+.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKN-----ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-----CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCE
Confidence 479999999999999999999886 678899999987654444555567789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||+++|+|.+++.... ..++... ++.|+.||+.||+|||++||+||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~----------------------------~~~~~~qi~~al~~lH~~~iiHr 126 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDM----------------------------ARFYLAEMVIAIDSVHQLHYVHR 126 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeEec
Confidence 999999999999999987532 1222222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||++.......
T Consensus 127 Dlkp~Nili~~~~~~kL~DfG~a~~~~~~~-------------------------------------------------- 156 (332)
T cd05623 127 DIKPDNILMDMNGHIRLADFGSCLKLMEDG-------------------------------------------------- 156 (332)
T ss_pred CCCHHHEEECCCCCEEEeecchheecccCC--------------------------------------------------
Confidence 999999999999999999999974321100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 157 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~ 209 (332)
T cd05623 157 ---------------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY 209 (332)
T ss_pred ---------------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence 001123469999999999863 357899999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCC--CCCCCCCCchhHHhhhhHHHHHHHhccCCccc--ccCCCCChHHhhcCCCcCCCCcccccC
Q 010140 399 GENNEKTLINILKKPLT--FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK--RIGSLKGSVEIKRHEFFKGINWALIRS 474 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~--~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~--R~t~~~~~~ell~hp~f~~~~~~~~~~ 474 (517)
+.+..+.+.++...... +|..... ...++++||.+||..++.. |+++. |+++||||.+++|..+..
T Consensus 210 ~~~~~~~~~~i~~~~~~~~~p~~~~~------~s~~~~~li~~ll~~~~~r~~r~~~~----~~~~h~~f~~~~~~~~~~ 279 (332)
T cd05623 210 AESLVETYGKIMNHKERFQFPAQVTD------VSEDAKDLIRRLICSREHRLGQNGIE----DFKQHPFFTGIDWDNIRN 279 (332)
T ss_pred CCCHHHHHHHHhCCCccccCCCcccc------CCHHHHHHHHHHccChhhhcCCCCHH----HHhCCCCcCCCCHHHHhh
Confidence 98888888888765432 2222111 2235899999999765443 45555 999999999999999987
Q ss_pred CCCCCCCC
Q 010140 475 IKPPEVPN 482 (517)
Q Consensus 475 ~~p~~~~~ 482 (517)
..+|.+|.
T Consensus 280 ~~~~~~~~ 287 (332)
T cd05623 280 CEAPYIPE 287 (332)
T ss_pred CCCCccCC
Confidence 77776655
No 76
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.8e-48 Score=386.14 Aligned_cols=278 Identities=35% Similarity=0.615 Sum_probs=220.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|+++. +++.||+|++.+...........+..|+.++..++|+||++++++|.++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKN-----TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCe
Confidence 479999999999999999999887 678999999987655445556667889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||++||+|.+++.... ..+++.. ++.++.||+.||+|||++||+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~----------------------------~~~~~~qi~~~l~~lH~~~ivH~ 126 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDM----------------------------ARFYLAEMVLAIDSVHQLGYVHR 126 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc-CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeEEC
Confidence 999999999999999886532 2233222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||++..+....
T Consensus 127 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------- 156 (331)
T cd05597 127 DIKPDNVLLDKNGHIRLADFGSCLRLLADG-------------------------------------------------- 156 (331)
T ss_pred CCCHHHEEECCCCCEEEEECCceeecCCCC--------------------------------------------------
Confidence 999999999999999999999974322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 157 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 209 (331)
T cd05597 157 ---------------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred ---------------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence 000112369999999999973 347889999999999999999999999
Q ss_pred CCChHHHHHHHhcCCC--CCCCCCCCCchhHHhhhhHHHHHHHhccCCccc--ccCCCCChHHhhcCCCcCCCCcccccC
Q 010140 399 GENNEKTLINILKKPL--TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK--RIGSLKGSVEIKRHEFFKGINWALIRS 474 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~--R~t~~~~~~ell~hp~f~~~~~~~~~~ 474 (517)
+.+..+.+..+..... .++..... .+..+++||.+||..+++. |+++. ++++||||++++|..+..
T Consensus 210 ~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~li~~ll~~~~~r~~r~~~~----~~l~hp~~~~~~~~~~~~ 279 (331)
T cd05597 210 AESLVETYGKIMNHKEHFQFPPDVTD------VSEEAKDLIRRLICSPETRLGRNGLQ----DFKDHPFFEGIDWDNIRN 279 (331)
T ss_pred CCCHHHHHHHHHcCCCcccCCCccCC------CCHHHHHHHHHHccCcccccCCCCHH----HHhcCCCCCCCCHHHHhh
Confidence 8887777777765432 22222111 2235899999999753332 55665 999999999999998887
Q ss_pred CCCCCCCC
Q 010140 475 IKPPEVPN 482 (517)
Q Consensus 475 ~~p~~~~~ 482 (517)
..+|..|.
T Consensus 280 ~~~~~~~~ 287 (331)
T cd05597 280 STAPYVPE 287 (331)
T ss_pred CCCCccCc
Confidence 77776554
No 77
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.6e-48 Score=387.78 Aligned_cols=271 Identities=38% Similarity=0.702 Sum_probs=212.8
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. +++.||+|++.+...........+..|+.++..+ +||||+++++++...+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKK-----TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 469999999999999887 6789999999876544444556677788888776 8999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||+++|+|..++... ..++.... +.++.||+.||+|||++||+||||||+
T Consensus 76 E~~~~~~L~~~~~~~--~~l~~~~~----------------------------~~i~~qi~~~l~~lH~~~ivH~Dikp~ 125 (329)
T cd05618 76 EYVNGGDLMFHMQRQ--RKLPEEHA----------------------------RFYSAEISLALNYLHERGIIYRDLKLD 125 (329)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeeeCCCCHH
Confidence 999999998887654 22333222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nili~~~~~~kL~DfG~~~~~~~~-------------------------------------------------------- 149 (329)
T cd05618 126 NVLLDSEGHIKLTDYGMCKEGLRP-------------------------------------------------------- 149 (329)
T ss_pred HEEECCCCCEEEeeCCccccccCC--------------------------------------------------------
Confidence 999999999999999997321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC--------
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE-------- 400 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~-------- 400 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~ 207 (329)
T cd05618 150 ----------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 207 (329)
T ss_pred ----------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccc
Confidence 00122357999999999999999999999999999999999999999531
Q ss_pred -ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC--CChHHhhcCCCcCCCCccccc--CC
Q 010140 401 -NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFKGINWALIR--SI 475 (517)
Q Consensus 401 -~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~--~~~~ell~hp~f~~~~~~~~~--~~ 475 (517)
........+......+|... ...+.+||.+||+.||++|+++. ..+.++++||||++++|.... .+
T Consensus 208 ~~~~~~~~~i~~~~~~~p~~~---------~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~ 278 (329)
T cd05618 208 NTEDYLFQVILEKQIRIPRSL---------SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQV 278 (329)
T ss_pred ccHHHHHHHHhcCCCCCCCCC---------CHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCC
Confidence 11223444555555444321 12488999999999999999963 235699999999999998663 34
Q ss_pred CCCCCCC
Q 010140 476 KPPEVPN 482 (517)
Q Consensus 476 ~p~~~~~ 482 (517)
.||..|.
T Consensus 279 ~~~~~~~ 285 (329)
T cd05618 279 VPPFKPN 285 (329)
T ss_pred CcCccCC
Confidence 5554443
No 78
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.1e-48 Score=386.03 Aligned_cols=281 Identities=35% Similarity=0.646 Sum_probs=223.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|+++. +++.||+|++.+...........+..|+.++..++|+||+++++++.+.+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKH-----TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECC-----CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 579999999999999999999886 678899999987554444455667779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++||+|.+++.... ..+++..+ +.++.||+.||+|||++||+||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~----------------------------~~~~~qi~~~L~~lH~~~iiHr 126 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMA----------------------------RFYIAEMVLAIHSIHQLHYVHR 126 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeeec
Confidence 999999999999999987632 22332222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+++.+....
T Consensus 127 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 156 (331)
T cd05624 127 DIKPDNVLLDMNGHIRLADFGSCLKMNQDG-------------------------------------------------- 156 (331)
T ss_pred cCchHHEEEcCCCCEEEEeccceeeccCCC--------------------------------------------------
Confidence 999999999999999999999984322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 157 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 157 ---------------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred ---------------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence 001123469999999999976 457889999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCC--CCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLT--FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIK 476 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~--~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~ 476 (517)
+.+..+.+..+...... +|..... .+.++++||.+||..++ +|+.. ..++++++||||++++|..++...
T Consensus 210 ~~~~~~~~~~i~~~~~~~~~p~~~~~------~~~~~~~li~~ll~~~~-~~~~~-~~~~~~~~h~~f~~~~~~~~~~~~ 281 (331)
T cd05624 210 AESLVETYGKIMNHEERFQFPSHITD------VSEEAKDLIQRLICSRE-RRLGQ-NGIEDFKKHAFFEGIDWENIRNLE 281 (331)
T ss_pred CCCHHHHHHHHHcCCCcccCCCcccc------CCHHHHHHHHHHccCch-hhcCC-CCHHHHhcCCCcCCCCHHHHhhCC
Confidence 88888877777664322 2222111 12358999999999655 55432 344599999999999999998888
Q ss_pred CCCCCCC
Q 010140 477 PPEVPNN 483 (517)
Q Consensus 477 p~~~~~~ 483 (517)
+|..|..
T Consensus 282 ~~~~p~~ 288 (331)
T cd05624 282 APYIPDV 288 (331)
T ss_pred CCccCCC
Confidence 8877763
No 79
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.9e-49 Score=397.00 Aligned_cols=261 Identities=28% Similarity=0.444 Sum_probs=214.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-C-----CCccceeeee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-H-----PFLPTLYAEF 158 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-H-----pnIv~l~~~~ 158 (517)
+|.+++.||+|+||.|.+|.+.. +++.||||+++.+. ....+...|+.||..|+ | -|||+++++|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~-----T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHK-----TGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEEEEEEecccccceeEEEEecC-----CCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 68999999999999999999998 78999999998764 44566677999999996 4 3799999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
...+++|||+|++ +.+|+++++.+...++++..+ |.++.||+.||.+||+.
T Consensus 258 ~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~i----------------------------r~~~~Qil~~L~~L~~l 308 (586)
T KOG0667|consen 258 YFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLV----------------------------RKFAQQILTALLFLHEL 308 (586)
T ss_pred ccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhC
Confidence 9999999999999 779999999987776666544 47889999999999999
Q ss_pred CceeccCCCCceEEccCC--cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDG--HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~--~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
||||+|||||||||...+ .|||+|||.|....
T Consensus 309 ~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~---------------------------------------------- 342 (586)
T KOG0667|consen 309 GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES---------------------------------------------- 342 (586)
T ss_pred CeeeccCChhheeeccCCcCceeEEecccccccC----------------------------------------------
Confidence 999999999999997544 79999999873211
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
....+++.++.|+|||++.|.+|+.+.||||||||++||++|.+.
T Consensus 343 -----------------------------------q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 343 -----------------------------------QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred -----------------------------------CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence 112366889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCCCCCC--------------C---------------------------------CCC-CchhH-
Q 010140 397 FKGENNEKTLINILKKPLTFPR--------------I---------------------------------GVS-SSKEF- 427 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~--------------~---------------------------------~~~-~~~~~- 427 (517)
|.|.++.+.+..|++-....|. . ..+ ..+.+
T Consensus 388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~ 467 (586)
T KOG0667|consen 388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLE 467 (586)
T ss_pred cCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccc
Confidence 9999999988888541111000 0 000 00000
Q ss_pred -----HhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 428 -----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 428 -----~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
..-..+.|||.+||.+||.+|+|+. |+|+||||.+..
T Consensus 468 ~~~~~~~~~~F~dflk~~L~~dP~~R~tp~----qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 468 SGLPKADDKLFIDFLKRCLEWDPAERITPA----QALNHPFLTGTS 509 (586)
T ss_pred hhcccccHHHHHHHHHHHhccCchhcCCHH----HHhcCccccccc
Confidence 1122478999999999999999998 999999999643
No 80
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.7e-48 Score=385.75 Aligned_cols=265 Identities=38% Similarity=0.691 Sum_probs=214.4
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-HHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 167 (517)
++.||+|+||.||+|+..... ..++.||+|++.+..... ......+..|+.+|+.++||||++++++|..++.+|+|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 78 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGA--DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLI 78 (323)
T ss_pred CceeeecCCeEEEEEEEcccC--CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEE
Confidence 367999999999999875321 257889999998764422 23345567799999999999999999999999999999
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCC
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKP 247 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp 247 (517)
|||++||+|.+++.... .+... ..+.++.||+.||+|||++||+||||||
T Consensus 79 ~e~~~~~~L~~~~~~~~--~~~~~----------------------------~~~~~~~qi~~~l~~lH~~~ivH~dlkp 128 (323)
T cd05584 79 LEYLSGGELFMHLEREG--IFMED----------------------------TACFYLSEISLALEHLHQQGIIYRDLKP 128 (323)
T ss_pred EeCCCCchHHHHHHHcC--CCCHH----------------------------HHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 99999999999886542 22221 1235789999999999999999999999
Q ss_pred CceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccc
Q 010140 248 ENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIR 327 (517)
Q Consensus 248 ~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (517)
+|||++.+|.+||+|||+++.....
T Consensus 129 ~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------------- 153 (323)
T cd05584 129 ENILLDAQGHVKLTDFGLCKESIHE------------------------------------------------------- 153 (323)
T ss_pred HHeEECCCCCEEEeeCcCCeecccC-------------------------------------------------------
Confidence 9999999999999999997421100
Q ss_pred cccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHH
Q 010140 328 EQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407 (517)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~ 407 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+....+.
T Consensus 154 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~ 210 (323)
T cd05584 154 -----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTID 210 (323)
T ss_pred -----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 011223469999999999999889999999999999999999999999988888888
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~ 472 (517)
.+.......|... ..++.+||.+||+.||++||+.. ..+.++++||||+..+|..+
T Consensus 211 ~~~~~~~~~~~~~---------~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~ 267 (323)
T cd05584 211 KILKGKLNLPPYL---------TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDL 267 (323)
T ss_pred HHHcCCCCCCCCC---------CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence 8887766554322 12489999999999999999432 23459999999999999866
No 81
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-47 Score=383.43 Aligned_cols=271 Identities=38% Similarity=0.700 Sum_probs=215.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+++. .++.||+|++.+...........+..|+.++.++ +||||+++++++...+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKK-----NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 479999999999999887 6789999999887655555667778899999888 6999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++||+|..++... ..+++.. ++.|+.||+.||+|||++||+||||||+
T Consensus 76 e~~~~~~L~~~~~~~--~~l~~~~----------------------------~~~~~~qi~~al~~lH~~~ivHrDlkp~ 125 (327)
T cd05617 76 EYVNGGDLMFHMQRQ--RKLPEEH----------------------------ARFYAAEICIALNFLHERGIIYRDLKLD 125 (327)
T ss_pred eCCCCCcHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence 999999998887654 2233322 2467899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------------- 149 (327)
T cd05617 126 NVLLDADGHIKLTDYGMCKEGLGP-------------------------------------------------------- 149 (327)
T ss_pred HEEEeCCCCEEEeccccceeccCC--------------------------------------------------------
Confidence 999999999999999987421100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC-------
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------- 401 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~------- 401 (517)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~ 207 (327)
T cd05617 150 ----------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT 207 (327)
T ss_pred ----------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc
Confidence 011224579999999999999999999999999999999999999996421
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC--CChHHhhcCCCcCCCCccccc--CCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFKGINWALIR--SIKP 477 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~--~~~~ell~hp~f~~~~~~~~~--~~~p 477 (517)
.......+......+|... ...+.++|.+||+.||.+|+++. ..+.++++||||++++|..+. ...|
T Consensus 208 ~~~~~~~~~~~~~~~p~~~---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~ 278 (327)
T cd05617 208 EDYLFQVILEKPIRIPRFL---------SVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTP 278 (327)
T ss_pred HHHHHHHHHhCCCCCCCCC---------CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCC
Confidence 2233444445444444321 12489999999999999999964 346799999999999999774 3445
Q ss_pred CCCCC
Q 010140 478 PEVPN 482 (517)
Q Consensus 478 ~~~~~ 482 (517)
|+.|.
T Consensus 279 ~~~~~ 283 (327)
T cd05617 279 PFKPQ 283 (327)
T ss_pred CccCC
Confidence 54443
No 82
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3e-47 Score=379.92 Aligned_cols=311 Identities=56% Similarity=0.965 Sum_probs=239.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|.+.. +++.||+|.+.............+..|+.+++.++||||+++++.+..+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKG-----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcC-----CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCE
Confidence 479999999999999999999886 678999999987655444566778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+.|++|.+++.......++.... +.++.||+.||+|||++|++||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~----------------------------~~~~~qi~~~l~~lH~~~i~H~ 127 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVA----------------------------RFYAAEVLLALEYLHLLGIVYR 127 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHH----------------------------HHHHHHHHHHHHHHHHCCeecc
Confidence 999999999999999987654344433322 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||++................ . ......
T Consensus 128 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~---------------------~-----~~~~~~-------- 173 (316)
T cd05574 128 DLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRK---------------------G-----SRRSSV-------- 173 (316)
T ss_pred CCChHHeEEcCCCCEEEeecchhhccccccccccccccc---------------------c-----cccccc--------
Confidence 999999999999999999999985443211100000000 0 000000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
..................++||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 174 ---------------~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 174 ---------------NSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ---------------cccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 00000000111122334568999999999999888999999999999999999999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCCCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 483 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~~~~~~ 483 (517)
..+..+......++.... ....+.+||.+||+.||++||+....++|+++||||++++|..+....||.+|..
T Consensus 239 ~~~~~~~~~~~~~~~~~~-------~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 311 (316)
T cd05574 239 ETFSNILKKEVTFPGSPP-------VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRP 311 (316)
T ss_pred HHHHHHhcCCccCCCccc-------cCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCc
Confidence 877777765555443221 2235899999999999999999666666999999999999999999998887654
No 83
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6e-48 Score=387.37 Aligned_cols=269 Identities=39% Similarity=0.687 Sum_probs=217.4
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc---CCCCccceeeeeecCceeEEEE
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
||+|+||+||+|+++. +++.||||++.+..............|..++..+ +||||+++++++.....+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKD-----TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECC-----CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence 7999999999999886 6789999999876554444455555677777665 7999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||+++|+|..++... ..+++..+ +.++.||+.||+|||++||+||||||+
T Consensus 76 e~~~~g~L~~~l~~~--~~~~~~~~----------------------------~~~~~qil~al~~LH~~~ivHrDlkp~ 125 (330)
T cd05586 76 DYMSGGELFWHLQKE--GRFSEDRA----------------------------KFYIAELVLALEHLHKYDIVYRDLKPE 125 (330)
T ss_pred cCCCCChHHHHHHhc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeEeccCCHH
Confidence 999999999888653 23333222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++.....
T Consensus 126 Nili~~~~~~kl~Dfg~a~~~~~~-------------------------------------------------------- 149 (330)
T cd05586 126 NILLDATGHIALCDFGLSKANLTD-------------------------------------------------------- 149 (330)
T ss_pred HeEECCCCCEEEecCCcCcCCCCC--------------------------------------------------------
Confidence 999999999999999997321100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~ 407 (517)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 150 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~ 207 (330)
T cd05586 150 ----------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYR 207 (330)
T ss_pred ----------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHH
Confidence 0112345799999999999765 48999999999999999999999999988888888
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccC--CCCCCCC
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRS--IKPPEVP 481 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~--~~p~~~~ 481 (517)
.+..+...++.... ..++.+||.+||+.||.+||++...+.++++||||+..+|..+.. +.||..|
T Consensus 208 ~i~~~~~~~~~~~~--------~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~ 275 (330)
T cd05586 208 NIAFGKVRFPKNVL--------SDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKP 275 (330)
T ss_pred HHHcCCCCCCCccC--------CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccC
Confidence 88777665554221 124899999999999999998877788999999999999997633 4444444
No 84
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-47 Score=385.00 Aligned_cols=280 Identities=41% Similarity=0.753 Sum_probs=215.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-HHHHhHHHHHHHHHHhc-CCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 162 (517)
+|++++.||+|+||.||+|+..... .+++.||+|++.+..... ......+..|+.++..+ +||||+++++++..++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGH--DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence 5899999999999999999875321 257899999998654322 23445677899999999 5999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|+||||++||+|.+++... ..++.... +.++.||+.||+|||++||+|
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~----------------------------~~~~~qi~~~l~~lH~~~ivH 128 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQR--DNFSEDEV----------------------------RFYSGEIILALEHLHKLGIVY 128 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCcEe
Confidence 999999999999999988653 22333222 367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.+|.+||+|||+++.+....
T Consensus 129 rDlkp~Nili~~~~~~kl~DfG~~~~~~~~~------------------------------------------------- 159 (332)
T cd05614 129 RDIKLENILLDSEGHVVLTDFGLSKEFLSEE------------------------------------------------- 159 (332)
T ss_pred cCCCHHHeEECCCCCEEEeeCcCCccccccC-------------------------------------------------
Confidence 9999999999999999999999984321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......+||+.|+|||++.+.. ++.++|||||||++|||++|..||....
T Consensus 160 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 211 (332)
T cd05614 160 ----------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEG 211 (332)
T ss_pred ----------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCC
Confidence 01122357999999999998764 7899999999999999999999997532
Q ss_pred ----hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--C
Q 010140 402 ----NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--S 474 (517)
Q Consensus 402 ----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~ 474 (517)
.......+......++.. ....+.+||.+||+.||++||++. ..++++++||||++.+|..+. .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~ 282 (332)
T cd05614 212 ERNTQSEVSRRILKCDPPFPSF---------IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRK 282 (332)
T ss_pred CCCCHHHHHHHHhcCCCCCCCC---------CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCC
Confidence 233344444444333321 112489999999999999999763 245699999999999998663 3
Q ss_pred CCCCCCCC
Q 010140 475 IKPPEVPN 482 (517)
Q Consensus 475 ~~p~~~~~ 482 (517)
..+|+.|.
T Consensus 283 ~~~~~~~~ 290 (332)
T cd05614 283 VNPPFRPS 290 (332)
T ss_pred CCCCcCCC
Confidence 44554443
No 85
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-48 Score=383.59 Aligned_cols=252 Identities=26% Similarity=0.429 Sum_probs=203.8
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..+++.+.+.||+|+||+||+|.+++. ..||||++......... ...+.+|+.+|.+++|||||+++|++.+
T Consensus 38 i~~~~l~~~~~iG~G~~g~V~~~~~~g~------~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 38 IDPDELPIEEVLGSGSFGTVYKGKWRGT------DVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred cChHHhhhhhhcccCCceeEEEEEeCCc------eeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4455667777899999999999999862 33999999876544333 7788889999999999999999999998
Q ss_pred Cc-eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 SH-YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 ~~-~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.. .++|||||+++|+|..++.......++.... ..|+.||+.||.|||+++
T Consensus 111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~----------------------------l~~aldiArGm~YLH~~~ 162 (362)
T KOG0192|consen 111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVR----------------------------LRIALDIARGMEYLHSEG 162 (362)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHH----------------------------HHHHHHHHHHHHHHhcCC
Confidence 87 7999999999999999997742233433322 267899999999999999
Q ss_pred -ceeccCCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 240 -IVYRDLKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 240 -iiHrDLKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||||||||+|||++.++ ++||+|||+++......
T Consensus 163 ~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-------------------------------------------- 198 (362)
T KOG0192|consen 163 PIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-------------------------------------------- 198 (362)
T ss_pred CeeecccChhhEEEcCCCCEEEECCCccceeecccc--------------------------------------------
Confidence 99999999999999998 99999999985432100
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc--CCCCCccchHHHHHHHHHHHhhCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS--GQGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~--~~~~~~~~DiWSlGvil~elltG~~ 395 (517)
...+...||+.|||||++. ...|+.++||||||++||||+||+.
T Consensus 199 ----------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~ 244 (362)
T KOG0192|consen 199 ----------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI 244 (362)
T ss_pred ----------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence 1122357999999999999 5589999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
||.+....+....+.......+... ... ..+..||.+||..||..||+..
T Consensus 245 Pf~~~~~~~~~~~v~~~~~Rp~~p~-~~~------~~l~~l~~~CW~~dp~~RP~f~ 294 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVVVGGLRPPIPK-ECP------PHLSSLMERCWLVDPSRRPSFL 294 (362)
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCCc-cCC------HHHHHHHHHhCCCCCCcCCCHH
Confidence 9999998776666664433322211 122 2489999999999999999996
No 86
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-49 Score=370.38 Aligned_cols=267 Identities=27% Similarity=0.340 Sum_probs=210.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec---
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--- 160 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--- 160 (517)
..|..++.||+|+||.|+.+.++. +++.||||.+.... ......++..+|+.+|++++|+||+.+++++..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~-----t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKR-----TGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred ceecccccccCcceeeEEEEEEcC-----CCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 456668999999999999999998 67999999987432 334556788889999999999999999999965
Q ss_pred --CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 161 --SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 161 --~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
-+.+|+|+|+| +.||.+.++... .+ ...+++.++.||+.||.|+|+.
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~~~--~L----------------------------~d~H~q~f~YQiLrgLKyiHSA 144 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKSQQ--DL----------------------------TDDHAQYFLYQILRGLKYIHSA 144 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHcCc--cc----------------------------cHHHHHHHHHHHHHhcchhhcc
Confidence 45689999999 789999887642 12 2334457889999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||+||||||.|+|++.+..+||||||+|+.....
T Consensus 145 nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~---------------------------------------------- 178 (359)
T KOG0660|consen 145 NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF---------------------------------------------- 178 (359)
T ss_pred cccccccchhheeeccCCCEEeccccceeecccc----------------------------------------------
Confidence 9999999999999999999999999999654321
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
......+.++.|.+|+|||++... .|+.+.||||+|||+.||++|++.|
T Consensus 179 ------------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplF 228 (359)
T KOG0660|consen 179 ------------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLF 228 (359)
T ss_pred ------------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCC
Confidence 011223567899999999998654 5999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCCC--------------------CCCC-CCCchhH-HhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 398 KGENNEKTLINILKKPLTF--------------------PRIG-VSSSKEF-EEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~--------------------p~~~-~~~~~~~-~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
.|.+..+.+..|+.-.... |... .+....+ ...+.+.||+.+||..||.+|+|++
T Consensus 229 pG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~--- 305 (359)
T KOG0660|consen 229 PGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAE--- 305 (359)
T ss_pred CCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHH---
Confidence 9988777766665421111 1000 0000111 2234688999999999999999998
Q ss_pred HHhhcCCCcCCC
Q 010140 456 VEIKRHEFFKGI 467 (517)
Q Consensus 456 ~ell~hp~f~~~ 467 (517)
|+|+||||...
T Consensus 306 -eAL~hPYl~~~ 316 (359)
T KOG0660|consen 306 -EALAHPYLAPY 316 (359)
T ss_pred -HHhcChhhhhh
Confidence 99999999864
No 87
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-49 Score=383.60 Aligned_cols=257 Identities=27% Similarity=0.435 Sum_probs=214.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
..|+.++.||+|+||.||+|.+.. +++.||||++.-+.. ....+.+++|+.+|..++++||.++|+.|-.+..
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~-----t~k~vAiKii~Le~~--~deIediqqei~~Ls~~~~~~it~yygsyl~g~~ 85 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNK-----TKKVVAIKIIDLEEA--EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK 85 (467)
T ss_pred cccccchhccccccceeeeeeecc-----ccceEEEEEechhhc--chhhHHHHHHHHHHHhcCcchHHhhhhheeeccc
Confidence 458888999999999999999987 789999999987644 3556778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
++++||||.||++.+.++..+. +.+.+.. .++++++.||.|||.++.+||
T Consensus 86 LwiiMey~~gGsv~~lL~~~~~--~~E~~i~----------------------------~ilre~l~~l~ylH~~~kiHr 135 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGNI--LDEFEIA----------------------------VILREVLKGLDYLHSEKKIHR 135 (467)
T ss_pred HHHHHHHhcCcchhhhhccCCC--Cccceee----------------------------eehHHHHHHhhhhhhcceecc
Confidence 9999999999999998876432 1222222 356999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
|||+.|||+..+|.+||+|||++-.+..
T Consensus 136 DIKaanil~s~~g~vkl~DfgVa~ql~~---------------------------------------------------- 163 (467)
T KOG0201|consen 136 DIKAANILLSESGDVKLADFGVAGQLTN---------------------------------------------------- 163 (467)
T ss_pred cccccceeEeccCcEEEEecceeeeeec----------------------------------------------------
Confidence 9999999999999999999999833221
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
...+..+++|||.|||||++.+..|+.++||||||++.+||++|.+||....++
T Consensus 164 --------------------------~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm 217 (467)
T KOG0201|consen 164 --------------------------TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM 217 (467)
T ss_pred --------------------------hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc
Confidence 112336789999999999999889999999999999999999999999988886
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
..+..|-+..++ ....... +.+++||..||++||+.||+|. +||+|+|++..
T Consensus 218 rvlflIpk~~PP--~L~~~~S------~~~kEFV~~CL~k~P~~RpsA~----~LLKh~FIk~a 269 (467)
T KOG0201|consen 218 RVLFLIPKSAPP--RLDGDFS------PPFKEFVEACLDKNPEFRPSAK----ELLKHKFIKRA 269 (467)
T ss_pred eEEEeccCCCCC--ccccccC------HHHHHHHHHHhhcCcccCcCHH----HHhhhHHHHhc
Confidence 555555444322 2222222 2489999999999999999998 99999999863
No 88
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-49 Score=381.85 Aligned_cols=289 Identities=36% Similarity=0.661 Sum_probs=251.3
Q ss_pred HhhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccce
Q 010140 75 RRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTL 154 (517)
Q Consensus 75 ~~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l 154 (517)
......+.+.+++++..||-|+||.|-+++.+. ....+|+|++++......++.+++..|..||..++.|.||+|
T Consensus 411 ~~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~-----~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 411 AEEFAQVKLSDLKRIATLGVGGFGRVELVKVNS-----QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRL 485 (732)
T ss_pred HhhhcccchhhhhhhhhcccCccceEEEEEecc-----cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHH
Confidence 334556778899999999999999999999876 334699999999988888888999999999999999999999
Q ss_pred eeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 155 YAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
|-.|.++.++|++||-|-||+|...++.. ..+....+ |+|+.-+++|++|
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLrdR--g~Fdd~ta----------------------------rF~~acv~EAfeY 535 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILRDR--GSFDDYTA----------------------------RFYVACVLEAFEY 535 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhhhc--CCcccchh----------------------------hhhHHHHHHHHHH
Confidence 99999999999999999999999988765 33444333 4788999999999
Q ss_pred HHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
||++|||.|||||+|+|++.+|-+||.|||+|+.+..
T Consensus 536 LH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~------------------------------------------- 572 (732)
T KOG0614|consen 536 LHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS------------------------------------------- 572 (732)
T ss_pred HHhcCceeccCChhheeeccCCceEEeehhhHHHhcc-------------------------------------------
Confidence 9999999999999999999999999999999966542
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~ 394 (517)
+.++-++||||.|.|||++....++.++|.||||+++|||++|.
T Consensus 573 ------------------------------------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~ 616 (732)
T KOG0614|consen 573 ------------------------------------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGS 616 (732)
T ss_pred ------------------------------------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCC
Confidence 33566899999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccc
Q 010140 395 TPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWAL 471 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~ 471 (517)
+||.+.++...+..|+++. +.+|..... .+.+||+++...+|.+|++.. .++.+|.+|-||.+.||+-
T Consensus 617 pPFs~~dpmktYn~ILkGid~i~~Pr~I~k---------~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg 687 (732)
T KOG0614|consen 617 PPFSGVDPMKTYNLILKGIDKIEFPRRITK---------TATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG 687 (732)
T ss_pred CCCCCCchHHHHHHHHhhhhhhhcccccch---------hHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence 9999999999999999864 445543322 378999999999999999954 5788999999999999996
Q ss_pred c--cCCCCCCCCCCccc
Q 010140 472 I--RSIKPPEVPNNDLY 486 (517)
Q Consensus 472 ~--~~~~p~~~~~~~~~ 486 (517)
+ +.+.||++|....+
T Consensus 688 lr~~~L~pPi~~~va~p 704 (732)
T KOG0614|consen 688 LRSRTLPPPIIPSVANP 704 (732)
T ss_pred hhhccCCCCccccCCCc
Confidence 6 56788888875443
No 89
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-48 Score=368.96 Aligned_cols=271 Identities=28% Similarity=0.394 Sum_probs=213.8
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC-ccceeeeeecC
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEAS 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~ 161 (517)
...|..+++||+|+||+||+|+.+. +++.||+|.++-+... +..-....+|+.+|+.|+|+| ||.|++++...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~-----~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKR-----TGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEec-----CCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 3568888899999999999999997 7799999999765332 123345567999999999999 99999999877
Q ss_pred c------eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 162 H------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 162 ~------~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
+ .++||+||+ .-||..++...+......+. ..++.+++||+.||+||
T Consensus 84 ~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~--------------------------~~ik~~m~Qll~gl~~~ 136 (323)
T KOG0594|consen 84 NNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPP--------------------------RLIKSFMRQLLRGLAFL 136 (323)
T ss_pred ccccccceEEEEEEee-cccHHHHHHhccccccCCCH--------------------------HHHHHHHHHHHHHHHHH
Confidence 7 899999999 67999999886532111111 23468899999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|+++|+||||||+||||+.+|.+||+|||+|+.+....
T Consensus 137 H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~------------------------------------------ 174 (323)
T KOG0594|consen 137 HSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM------------------------------------------ 174 (323)
T ss_pred HhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc------------------------------------------
Confidence 99999999999999999999999999999995432110
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~ 394 (517)
...+.-++|.+|+|||++.|. .|+..+||||+|||++||++++
T Consensus 175 ------------------------------------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~ 218 (323)
T KOG0594|consen 175 ------------------------------------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRR 218 (323)
T ss_pred ------------------------------------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCC
Confidence 113345789999999999998 5999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCCC-----CCCCCC-----------CCCchhH-----HhhhhHHHHHHHhccCCcccccCCCC
Q 010140 395 TPFKGENNEKTLINILKKPL-----TFPRIG-----------VSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~-----~~p~~~-----------~~~~~~~-----~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
+.|.+..+.+.+.+|.+... .+|... ......+ ....+..+|+.+||+.+|.+|.++.
T Consensus 219 ~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~- 297 (323)
T KOG0594|consen 219 PLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAK- 297 (323)
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHH-
Confidence 99999999888888864211 111110 0000000 0113678999999999999999998
Q ss_pred ChHHhhcCCCcCCCC
Q 010140 454 GSVEIKRHEFFKGIN 468 (517)
Q Consensus 454 ~~~ell~hp~f~~~~ 468 (517)
.++.||||...+
T Consensus 298 ---~al~h~yf~~~~ 309 (323)
T KOG0594|consen 298 ---GALTHPYFSELP 309 (323)
T ss_pred ---HHhcChhhcccc
Confidence 999999999763
No 90
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-49 Score=370.64 Aligned_cols=260 Identities=32% Similarity=0.507 Sum_probs=204.9
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC---
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--- 161 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--- 161 (517)
.|.-.+++|.|+||.||+|.... +++.||||.+-.+. .. -.+|+.+|++++|||||+|..+|...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e-----~~~~vAIKKv~~d~----r~---knrEl~im~~l~HpNIV~L~~~f~~~~~~ 92 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRE-----TEEEVAIKKVLQDK----RY---KNRELQIMRKLDHPNIVRLLYFFSSSTES 92 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcC-----CCceeEEEEecCCC----Cc---CcHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence 58899999999999999999997 57889999986552 11 22499999999999999999988532
Q ss_pred --ceeEEEEEecCCCchhHHHHhCC--CCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 162 --HYSCLVMEYCPGGDLYAARQRQP--GKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
-++.|||||++ .+|.++++... ..+++.- .++.|+.||++||.|||+
T Consensus 93 d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~----------------------------~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 93 DEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLL----------------------------EIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred chhHHHHHHHhch-HHHHHHHHHHhhcCCCCcee----------------------------eeHHHHHHHHHHHHHHHh
Confidence 25679999995 49999887632 2233332 235788999999999999
Q ss_pred cCceeccCCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
.||+||||||.|||+|.+ |.+||||||.|+.+...
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~-------------------------------------------- 179 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG-------------------------------------------- 179 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccC--------------------------------------------
Confidence 999999999999999976 89999999999654421
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~ 395 (517)
....++..|+.|+|||.+.|.. |+.+.||||.||++.||+-|++
T Consensus 180 -----------------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 180 -----------------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred -----------------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 1224567899999999999975 9999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcC-----------------CCCCCCCCCCCc---hhHHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 396 PFKGENNEKTLINILKK-----------------PLTFPRIGVSSS---KEFEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~-----------------~~~~p~~~~~~~---~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
.|.|.+..+++..|.+- ...+|....... ......+++.||+.++|.++|.+|.++.
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~--- 301 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSAL--- 301 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHH---
Confidence 99999888877776541 111222111110 0112345689999999999999999998
Q ss_pred HHhhcCCCcCCCC
Q 010140 456 VEIKRHEFFKGIN 468 (517)
Q Consensus 456 ~ell~hp~f~~~~ 468 (517)
|++.||||+...
T Consensus 302 -~~l~h~fFdelr 313 (364)
T KOG0658|consen 302 -EALAHPFFDELR 313 (364)
T ss_pred -HHhcchhhHHhh
Confidence 999999998653
No 91
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-48 Score=377.89 Aligned_cols=263 Identities=30% Similarity=0.466 Sum_probs=227.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
+=|.+.+.||+|.|++|-+|++.- ++..||||++.+..+... ...++..|+++|+.++|||||+||++......
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVF-----TGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTK 91 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVF-----TGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTK 91 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhc-----ccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccce
Confidence 558999999999999999999887 789999999998766533 33556679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|||+|+-.+|||++||.++. ..+.+..+ ++|.+||+.|+.|+|...+|||
T Consensus 92 lyLiLELGD~GDl~DyImKHe-~Gl~E~La----------------------------~kYF~QI~~AI~YCHqLHVVHR 142 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHE-EGLNEDLA----------------------------KKYFAQIVHAISYCHQLHVVHR 142 (864)
T ss_pred EEEEEEecCCchHHHHHHhhh-ccccHHHH----------------------------HHHHHHHHHHHHHHhhhhhhcc
Confidence 999999999999999998763 33444443 4788999999999999999999
Q ss_pred cCCCCceEE-ccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 244 DLKPENVLV-REDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 244 DLKp~NILl-~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
||||+|+++ ..-|-|||.|||++..+..
T Consensus 143 DLKPENVVFFEKlGlVKLTDFGFSNkf~P--------------------------------------------------- 171 (864)
T KOG4717|consen 143 DLKPENVVFFEKLGLVKLTDFGFSNKFQP--------------------------------------------------- 171 (864)
T ss_pred cCCcceeEEeeecCceEeeeccccccCCC---------------------------------------------------
Confidence 999999876 4678999999999854432
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC-CccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~-~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
+.+..+.||+..|-|||++.|..| .+++||||||||||.|++|++||...+
T Consensus 172 ----------------------------G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN 223 (864)
T KOG4717|consen 172 ----------------------------GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN 223 (864)
T ss_pred ----------------------------cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc
Confidence 234567799999999999999998 568999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccccc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR 473 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~ 473 (517)
+.+.+..|+...+..|.- .+.+++|||..||..||.+|.+.+ ||..|+|++.+|-....
T Consensus 224 DSETLTmImDCKYtvPsh---------vS~eCrdLI~sMLvRdPkkRAslE----eI~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 224 DSETLTMIMDCKYTVPSH---------VSKECRDLIQSMLVRDPKKRASLE----EIVSTSWLQAGDRGLST 282 (864)
T ss_pred chhhhhhhhcccccCchh---------hhHHHHHHHHHHHhcCchhhccHH----HHhccccccCCCCCccc
Confidence 999999999998887753 233689999999999999999987 99999999999865443
No 92
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.6e-47 Score=373.73 Aligned_cols=277 Identities=36% Similarity=0.600 Sum_probs=215.9
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|++.+.||+|+||.||+|.++. +++.||+|.+.............+..|+.+++.++|+||+.+++.+.+++..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRA-----TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcC-----CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEE
Confidence 37889999999999999999987 6789999998765443333345566799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||++|++|.+++.......++.... ..++.|++.||.|||++||+|||
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~----------------------------~~~~~qi~~~l~~lH~~~iiH~d 127 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRA----------------------------VFYAAEICCGLEDLHQERIVYRD 127 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcccCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCEEeCC
Confidence 99999999999998886543333333322 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++.....
T Consensus 128 ikp~Nil~~~~~~~~l~Dfg~~~~~~~----------------------------------------------------- 154 (285)
T cd05630 128 LKPENILLDDHGHIRISDLGLAVHVPE----------------------------------------------------- 154 (285)
T ss_pred CCHHHEEECCCCCEEEeeccceeecCC-----------------------------------------------------
Confidence 999999999999999999998732110
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH-
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE- 403 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~- 403 (517)
........||+.|+|||++.+..++.++||||+||++|+|++|+.||......
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~ 208 (285)
T cd05630 155 --------------------------GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 208 (285)
T ss_pred --------------------------CccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence 00011236899999999999988999999999999999999999999875432
Q ss_pred --HHHHHHhcC-CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccccC--CCC
Q 010140 404 --KTLINILKK-PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIRS--IKP 477 (517)
Q Consensus 404 --~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~~--~~p 477 (517)
.....+... ....+. . ...++.+||.+||+.||++||++. ..+.|+++||||+.++|..+.. .+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~---~------~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 279 (285)
T cd05630 209 KREEVERLVKEVQEEYSE---K------FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEP 279 (285)
T ss_pred hHHHHHhhhhhhhhhcCc---c------CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCC
Confidence 222222211 111111 1 122489999999999999999942 1234999999999999997744 667
Q ss_pred CCCCC
Q 010140 478 PEVPN 482 (517)
Q Consensus 478 ~~~~~ 482 (517)
|+.|.
T Consensus 280 ~~~~~ 284 (285)
T cd05630 280 PFKPD 284 (285)
T ss_pred CCCCC
Confidence 76664
No 93
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.4e-47 Score=381.01 Aligned_cols=264 Identities=39% Similarity=0.727 Sum_probs=215.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||++++.... .+++.||+|++.+..... ....++..|+.+|++++||||+++++++..++.+|+|||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 78 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGP--DAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD 78 (318)
T ss_pred ceeeeCCCEEEEEEEEeccC--CCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence 57999999999999875321 157899999998765432 233456679999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++|+|.+++... ..+++.. ++.++.||+.||+|||++||+||||||+|
T Consensus 79 ~~~~~~L~~~l~~~--~~l~~~~----------------------------~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 128 (318)
T cd05582 79 FLRGGDLFTRLSKE--VMFTEED----------------------------VKFYLAELALALDHLHSLGIIYRDLKPEN 128 (318)
T ss_pred CCCCCcHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEecCCCCHHH
Confidence 99999999888653 2222222 24678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.....
T Consensus 129 il~~~~~~~kL~Dfg~~~~~~~~--------------------------------------------------------- 151 (318)
T cd05582 129 ILLDEEGHIKLTDFGLSKESIDH--------------------------------------------------------- 151 (318)
T ss_pred eEECCCCcEEEeeccCCcccCCC---------------------------------------------------------
Confidence 99999999999999997432110
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i 409 (517)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+
T Consensus 152 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 152 ---------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ---------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 01122357999999999999988999999999999999999999999998888888888
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCccccc
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIR 473 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~~ 473 (517)
......+|... ..++.+||.+||+.||++||++.+ .+.+++.||||+.++|..+.
T Consensus 211 ~~~~~~~p~~~---------~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T cd05582 211 LKAKLGMPQFL---------SPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLY 266 (318)
T ss_pred HcCCCCCCCCC---------CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHH
Confidence 77665554321 124899999999999999999853 36789999999999999763
No 94
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.7e-47 Score=376.63 Aligned_cols=263 Identities=28% Similarity=0.367 Sum_probs=202.4
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|++.++||.|+||.||+|+++. +++.||+|+++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKL-----TENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTER 76 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECC-----CCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 5789999999999999999999876 678999999864421 122345567999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||++ |+|.+++.... ..++.. .++.++.||+.||+|||++||+|
T Consensus 77 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~----------------------------~~~~~~~qi~~aL~~LH~~~ivH 126 (288)
T cd07871 77 CLTLVFEYLD-SDLKQYLDNCG-NLMSMH----------------------------NVKIFMFQLLRGLSYCHKRKILH 126 (288)
T ss_pred eEEEEEeCCC-cCHHHHHHhcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999996 59988876532 112222 22467899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++.....
T Consensus 127 ~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~-------------------------------------------------- 156 (288)
T cd07871 127 RDLKPQNLLINEKGELKLADFGLARAKSVP-------------------------------------------------- 156 (288)
T ss_pred CCCCHHHEEECCCCCEEECcCcceeeccCC--------------------------------------------------
Confidence 999999999999999999999998432100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 157 ----------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred ----------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001122368999999999876 458999999999999999999999999888
Q ss_pred hHHHHHHHhcCCCCC-------------------CCCCCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPLTF-------------------PRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~-------------------p~~~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
..+.+..+....... |........ ......+++|||.+||++||.+|||+. |+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~----~~l~ 284 (288)
T cd07871 209 VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAE----AALR 284 (288)
T ss_pred HHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHH----HHhc
Confidence 776665554321110 000000000 001224589999999999999999998 9999
Q ss_pred CCCc
Q 010140 461 HEFF 464 (517)
Q Consensus 461 hp~f 464 (517)
||||
T Consensus 285 hp~f 288 (288)
T cd07871 285 HSYF 288 (288)
T ss_pred CCCC
Confidence 9998
No 95
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5e-47 Score=376.08 Aligned_cols=268 Identities=28% Similarity=0.413 Sum_probs=201.8
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+++. +++.||||++...... .....+.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKV-----NGKLVALKVIRLQEEE--GTPFTAIREASLLKGLKHANIVLLHDIIHTKE 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECC-----CCCEEEEEEecccccc--ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC
Confidence 3789999999999999999999876 6788999998754211 22234567999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+ +++|.+++.... ..+.... ++.++.||+.||+|||++||+|
T Consensus 77 ~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~----------------------------~~~~~~qi~~al~~lH~~~ivH 126 (303)
T cd07869 77 TLTLVFEYV-HTDLCQYMDKHP-GGLHPEN----------------------------VKLFLFQLLRGLSYIHQRYILH 126 (303)
T ss_pred eEEEEEECC-CcCHHHHHHhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeec
Confidence 999999999 568888776532 2222222 2467899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++.....
T Consensus 127 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 156 (303)
T cd07869 127 RDLKPQNLLISDTGELKLADFGLARAKSVP-------------------------------------------------- 156 (303)
T ss_pred CCCCHHHEEECCCCCEEECCCCcceeccCC--------------------------------------------------
Confidence 999999999999999999999997422100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+..
T Consensus 157 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 208 (303)
T cd07869 157 ----------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK 208 (303)
T ss_pred ----------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 0011234689999999998764 47899999999999999999999998765
Q ss_pred hH-HHHHHHhc---CCC--CCC------CCC-----CCCch----hH---HhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 402 NE-KTLINILK---KPL--TFP------RIG-----VSSSK----EF---EEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 402 ~~-~~~~~i~~---~~~--~~p------~~~-----~~~~~----~~---~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
.. +.+..+.. ... .++ ... ..... .+ .....+.+||.+||+.||++|||+. |
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~----~ 284 (303)
T cd07869 209 DIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ----A 284 (303)
T ss_pred cHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH----H
Confidence 42 22322221 100 000 000 00000 00 1123578999999999999999998 9
Q ss_pred hhcCCCcCCCCc
Q 010140 458 IKRHEFFKGINW 469 (517)
Q Consensus 458 ll~hp~f~~~~~ 469 (517)
+++||||+++++
T Consensus 285 ~l~h~~f~~~~~ 296 (303)
T cd07869 285 ALSHEYFSDLPP 296 (303)
T ss_pred HhcCcccccCCh
Confidence 999999998865
No 96
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.4e-46 Score=366.83 Aligned_cols=281 Identities=36% Similarity=0.583 Sum_probs=219.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|+..+.||+|+||+||+|.+.. +++.||+|++.............+.+|+.+|+.++|+||+.+++.+..++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRA-----TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECC-----CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEE
Confidence 37889999999999999999886 6789999999776544444445567799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++++|..++.......++.... ..++.|++.||.|||++||+|||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~ql~~~l~~lH~~~iiH~d 127 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNPGFEEERA----------------------------LFYAAEILCGLEDLHRENTVYRD 127 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeeecC
Confidence 99999999999988876543333433333 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.+||+|||++.....
T Consensus 128 ikp~Nili~~~~~~kl~Dfg~~~~~~~----------------------------------------------------- 154 (285)
T cd05632 128 LKPENILLDDYGHIRISDLGLAVKIPE----------------------------------------------------- 154 (285)
T ss_pred CCHHHEEECCCCCEEEecCCcceecCC-----------------------------------------------------
Confidence 999999999999999999998733210
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 155 --------------------------~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~ 208 (285)
T cd05632 155 --------------------------GESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV 208 (285)
T ss_pred --------------------------CCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123368999999999998889999999999999999999999998876544
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCcccc--cCCCCCCCC
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVP 481 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~--~~~~p~~~~ 481 (517)
....+............. .....+.+||.+||+.||++||++.+ .+.++++|+||+..+|..+ +.+.|+++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05632 209 KREEVDRRVLETEEVYSA-----KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVP 283 (285)
T ss_pred HHHHHHHhhhccccccCc-----cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCC
Confidence 333332211111111000 11224899999999999999999643 3569999999999999965 456677766
Q ss_pred C
Q 010140 482 N 482 (517)
Q Consensus 482 ~ 482 (517)
.
T Consensus 284 ~ 284 (285)
T cd05632 284 D 284 (285)
T ss_pred C
Confidence 4
No 97
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.7e-47 Score=370.88 Aligned_cols=264 Identities=27% Similarity=0.358 Sum_probs=202.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|+++. +++.||+|++...... ......+.+|+.+++.++||||+++++++..++.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKE-----TKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECC-----CCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCE
Confidence 479999999999999999999986 6788999998754321 2334566679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||++++.|..+.... ..+.+.. ++.++.||+.||+|||++||+||
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~----------------------------~~~~~~qi~~~L~~lH~~~i~H~ 124 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMP--NGVPPEK----------------------------VRSYIYQLIKAIHWCHKNDIVHR 124 (287)
T ss_pred EEEEEecCCCCHHHHHHhcC--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeecC
Confidence 99999999887665443321 2222222 24678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+++......
T Consensus 125 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------- 154 (287)
T cd07848 125 DIKPENLLISHNDVLKLCDFGFARNLSEGS-------------------------------------------------- 154 (287)
T ss_pred CCCHHHEEEcCCCcEEEeeccCcccccccc--------------------------------------------------
Confidence 999999999999999999999984322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
........||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~ 207 (287)
T cd07848 155 ---------------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI 207 (287)
T ss_pred ---------------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 00112346899999999999988999999999999999999999999987765
Q ss_pred HHHHHHhcCCCC-------------------CCCCCCCCchh----HHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 404 KTLINILKKPLT-------------------FPRIGVSSSKE----FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 404 ~~~~~i~~~~~~-------------------~p~~~~~~~~~----~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+....+...... ++......... ...+.++.+||.+||+.||++|||+. |+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~----~~l~ 283 (287)
T cd07848 208 DQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTE----QCLN 283 (287)
T ss_pred HHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHH----HHhc
Confidence 544433321111 11110000000 01234589999999999999999998 9999
Q ss_pred CCCc
Q 010140 461 HEFF 464 (517)
Q Consensus 461 hp~f 464 (517)
||||
T Consensus 284 hp~f 287 (287)
T cd07848 284 HPAF 287 (287)
T ss_pred CCCC
Confidence 9998
No 98
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-46 Score=382.45 Aligned_cols=263 Identities=23% Similarity=0.378 Sum_probs=200.9
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
..+..++|++++.||+|+||.||+|.+.. +++.||+|..... .+.+|+.+|++++|||||+++++|
T Consensus 87 ~~~~~~~y~~~~~lg~G~~g~V~~~~d~~-----~~~~vaiK~~~~~---------~~~~E~~il~~l~HpnIv~~~~~~ 152 (391)
T PHA03212 87 AGIEKAGFSILETFTPGAEGFAFACIDNK-----TCEHVVIKAGQRG---------GTATEAHILRAINHPSIIQLKGTF 152 (391)
T ss_pred cccccCCcEEEEEEcCCCCeEEEEEEECC-----CCCEEEEechhhh---------hhHHHHHHHHhCCCCCCCCEeEEE
Confidence 34556789999999999999999999987 6789999975432 345699999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
..+...|+|||++ +++|..++... ..++... ++.++.||+.||+|||++
T Consensus 153 ~~~~~~~lv~e~~-~~~L~~~l~~~--~~l~~~~----------------------------~~~i~~qi~~aL~ylH~~ 201 (391)
T PHA03212 153 TYNKFTCLILPRY-KTDLYCYLAAK--RNIAICD----------------------------ILAIERSVLRAIQYLHEN 201 (391)
T ss_pred EECCeeEEEEecC-CCCHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhC
Confidence 9999999999999 57898887653 2232222 236789999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|||||||||+|||++.++.+||+|||+++.....
T Consensus 202 ~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~---------------------------------------------- 235 (391)
T PHA03212 202 RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI---------------------------------------------- 235 (391)
T ss_pred CcccCCCChHhEEEcCCCCEEEEeCCcccccccc----------------------------------------------
Confidence 9999999999999999999999999998421100
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 236 -------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 236 -------------------------------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred -------------------------------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 0011234579999999999999889999999999999999999998875
Q ss_pred CCC-------hHHHHHHHhcCCCCCC--------------------------CCCCCCchhHHhhhhHHHHHHHhccCCc
Q 010140 399 GEN-------NEKTLINILKKPLTFP--------------------------RIGVSSSKEFEEVVKLQDLISKLLVKNP 445 (517)
Q Consensus 399 ~~~-------~~~~~~~i~~~~~~~p--------------------------~~~~~~~~~~~~~~~l~dLi~~~L~~dP 445 (517)
... ....+..+.......| ..............++.+||.+||+.||
T Consensus 285 ~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP 364 (391)
T PHA03212 285 EKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDA 364 (391)
T ss_pred CcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCCh
Confidence 432 1122222221111100 0000001111234568999999999999
Q ss_pred ccccCCCCChHHhhcCCCcCCC
Q 010140 446 KKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 446 ~~R~t~~~~~~ell~hp~f~~~ 467 (517)
.+|||+. |+|+||||+.+
T Consensus 365 ~~Rpta~----elL~hp~f~~~ 382 (391)
T PHA03212 365 HHRPSAE----ALLDFAAFQDI 382 (391)
T ss_pred hhCCCHH----HHhcChhhccC
Confidence 9999998 99999999864
No 99
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-48 Score=385.57 Aligned_cols=263 Identities=29% Similarity=0.438 Sum_probs=218.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.+.|.|+..||.|+||.||+|..+. ++-..|-|+|.... ...++.+..|+.||..++||+||+|++.|...+
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nke-----t~~lAAaKvIetks---eEELEDylVEIeILa~CdHP~ivkLl~ayy~en 102 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKE-----TKLLAAAKVIETKS---EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN 102 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhccc-----chhhhhhhhhcccc---hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC
Confidence 3568899999999999999999886 56677889886442 356778888999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+||+.|||.||-...++-... ..+. ..+++.+++|++.||.|||+++|||
T Consensus 103 kLwiliEFC~GGAVDaimlEL~-r~Lt----------------------------E~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 103 KLWILIEFCGGGAVDAIMLELG-RVLT----------------------------EDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred ceEEEEeecCCchHhHHHHHhc-cccc----------------------------hHHHHHHHHHHHHHHHHHhhcchhh
Confidence 9999999999999887765532 2333 3444578899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
||||..|||++.+|.++|+|||.+.+..
T Consensus 154 RDLKAGNiL~TldGdirLADFGVSAKn~---------------------------------------------------- 181 (1187)
T KOG0579|consen 154 RDLKAGNILLTLDGDIRLADFGVSAKNK---------------------------------------------------- 181 (1187)
T ss_pred hhccccceEEEecCcEeeecccccccch----------------------------------------------------
Confidence 9999999999999999999999973211
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
....+..+++|||+|||||+..+ .+|++++||||||++|.||..+.+|.
T Consensus 182 --------------------------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH 235 (1187)
T KOG0579|consen 182 --------------------------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH 235 (1187)
T ss_pred --------------------------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc
Confidence 01223457899999999999754 57999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcc
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
...++..++.+|.+..++.......+.. .+.||+.+||.+||..||+++ +||+||||.+++-+
T Consensus 236 helnpMRVllKiaKSePPTLlqPS~Ws~------~F~DfLk~cL~Knp~~Rp~aa----qll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 236 HELNPMRVLLKIAKSEPPTLLQPSHWSR------SFSDFLKRCLVKNPRNRPPAA----QLLKHPFVQNAPSN 298 (1187)
T ss_pred cccchHHHHHHHhhcCCCcccCcchhhh------HHHHHHHHHHhcCCccCCCHH----HHhhCcccccCCcc
Confidence 9999999999998765433222222222 389999999999999999998 99999999976543
No 100
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.9e-46 Score=392.19 Aligned_cols=260 Identities=24% Similarity=0.355 Sum_probs=195.2
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC------CCCcccee
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD------HPFLPTLY 155 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~ 155 (517)
..++|+++++||+|+||+||+|.+.. .++.||||+++... ........|+.++..++ |++|++++
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~-----~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~ 197 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRK-----RKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQ 197 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcC-----CCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeE
Confidence 45789999999999999999999876 67889999996432 11223344777776664 45688999
Q ss_pred eeeecC-ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 156 AEFEAS-HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 156 ~~~~~~-~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
++|... .++|+|||++ |++|.+++... ..+.... ++.|+.||+.||+|
T Consensus 198 ~~~~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~----------------------------~~~i~~qi~~aL~y 246 (467)
T PTZ00284 198 RYFQNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRH----------------------------LAQIIFQTGVALDY 246 (467)
T ss_pred EEEEcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHH
Confidence 988754 5789999999 88898887654 2233222 24678999999999
Q ss_pred HHh-cCceeccCCCCceEEccCC----------------cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCC
Q 010140 235 LHM-MGIVYRDLKPENVLVREDG----------------HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCA 297 (517)
Q Consensus 235 LH~-~~iiHrDLKp~NILl~~~~----------------~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (517)
||+ .|||||||||+|||++.++ .+||+|||++....
T Consensus 247 LH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--------------------------- 299 (467)
T PTZ00284 247 FHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER--------------------------- 299 (467)
T ss_pred HHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc---------------------------
Confidence 998 5999999999999998765 49999999862110
Q ss_pred CCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCcc
Q 010140 298 TPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSA 377 (517)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~ 377 (517)
......+||+.|+|||++.+..|+.+
T Consensus 300 ------------------------------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~ 325 (467)
T PTZ00284 300 ------------------------------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYS 325 (467)
T ss_pred ------------------------------------------------------cccccccCCccccCcHHhhcCCCCcH
Confidence 01234579999999999999999999
Q ss_pred chHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCC---------------------CCCc------------
Q 010140 378 VDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIG---------------------VSSS------------ 424 (517)
Q Consensus 378 ~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~---------------------~~~~------------ 424 (517)
+|||||||++|||++|++||.+.+..+.+..+......+|... ....
T Consensus 326 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T PTZ00284 326 TDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPV 405 (467)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccch
Confidence 9999999999999999999998877665544433211111000 0000
Q ss_pred hhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 425 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 425 ~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
........+.|||.+||++||++|||+. |+|+||||..
T Consensus 406 ~~~~~~~~~~dli~~mL~~dP~~R~ta~----e~L~Hp~~~~ 443 (467)
T PTZ00284 406 REVIRDDLLCDLIYGLLHYDRQKRLNAR----QMTTHPYVLK 443 (467)
T ss_pred hhhhchHHHHHHHHHhCCcChhhCCCHH----HHhcCccccc
Confidence 0001123578999999999999999998 9999999985
No 101
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-45 Score=364.12 Aligned_cols=265 Identities=42% Similarity=0.766 Sum_probs=221.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|.+.. .++.||+|++.+...........+.+|+.++++++||||+++++++.+++.
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKG-----SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe
Confidence 479999999999999999999886 578899999987665545556778889999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+++++|.+++... ..++.... ..++.||+.||.|||++||+||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~----------------------------~~~~~qil~~l~~lH~~~i~H~ 125 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS--GRFPEPVA----------------------------RFYAAQVVLALEYLHSLDIVYR 125 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCEecC
Confidence 99999999999999988764 22332222 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+|||++.++.+||+|||++.....
T Consensus 126 dl~p~nili~~~~~~kl~dfg~~~~~~~---------------------------------------------------- 153 (290)
T cd05580 126 DLKPENLLLDSDGYIKITDFGFAKRVKG---------------------------------------------------- 153 (290)
T ss_pred CCCHHHEEECCCCCEEEeeCCCccccCC----------------------------------------------------
Confidence 9999999999999999999999743211
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
......|++.|+|||.+.+..++.++||||||+++|+|++|..||...+..
T Consensus 154 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 204 (290)
T cd05580 154 -----------------------------RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI 204 (290)
T ss_pred -----------------------------CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 012336889999999998888899999999999999999999999988877
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCC-CCChHHhhcCCCcCCCCccccc
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS-LKGSVEIKRHEFFKGINWALIR 473 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~-~~~~~ell~hp~f~~~~~~~~~ 473 (517)
.....+..+...+|... ...++++|.+||..||.+|++. ...++|+++||||+.++|..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~---------~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 266 (290)
T cd05580 205 QIYEKILEGKVRFPSFF---------SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALL 266 (290)
T ss_pred HHHHHHhcCCccCCccC---------CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHh
Confidence 77777776655554322 1248999999999999999943 2455699999999999998774
No 102
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-47 Score=378.90 Aligned_cols=259 Identities=30% Similarity=0.494 Sum_probs=220.3
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|..++++|+|+||.+++++++. ..+.|++|.+.-.....+.. .....|+.++++++|||||.+++.|..++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~-----~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKS-----DDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhcc-----CCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCC
Confidence 5789999999999999999999987 67799999998665443322 35667999999999999999999998887
Q ss_pred e-eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 163 Y-SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 163 ~-~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
. +||||+||+||+|.+.+....+..+++... ..|+.||+.||.|||+++|+
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i----------------------------~~~~~Q~~~av~ylH~~~iL 128 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQKGVLFPEERI----------------------------LKWFVQILLAVNYLHENRVL 128 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHhhccccHHHH----------------------------HHHHHHHHHHHHHHHhhhhh
Confidence 7 999999999999999998876444444333 26778999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
|||||+.||+++.++.|||+|||+|+.+...
T Consensus 129 HRDlK~~Nifltk~~~VkLgDfGlaK~l~~~------------------------------------------------- 159 (426)
T KOG0589|consen 129 HRDLKCANIFLTKDKKVKLGDFGLAKILNPE------------------------------------------------- 159 (426)
T ss_pred cccchhhhhhccccCceeecchhhhhhcCCc-------------------------------------------------
Confidence 9999999999999999999999999665421
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.....+.+|||.||+||++.+.+|+.|+|||||||++|||++-+++|.+.+
T Consensus 160 -----------------------------~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 160 -----------------------------DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN 210 (426)
T ss_pred -----------------------------hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc
Confidence 112356789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
...+..+|....... ....... +++.||..||..+|..||++. +||.+|...
T Consensus 211 m~~Li~ki~~~~~~P--lp~~ys~------el~~lv~~~l~~~P~~RPsa~----~LL~~P~l~ 262 (426)
T KOG0589|consen 211 MSELILKINRGLYSP--LPSMYSS------ELRSLVKSMLRKNPEHRPSAL----ELLRRPHLL 262 (426)
T ss_pred hHHHHHHHhhccCCC--CCccccH------HHHHHHHHHhhcCCccCCCHH----HHhhChhhh
Confidence 999999998876322 1222222 489999999999999999998 999998876
No 103
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.1e-46 Score=371.97 Aligned_cols=267 Identities=26% Similarity=0.364 Sum_probs=207.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++++.||+|+||.||+|++.. ++..||+|++..+.. .....++.+|+.+|+.++||||+++++++..
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKP-----SGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECC-----CCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 346899999999999999999999886 678899999875421 2334567789999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc-C
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM-G 239 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ 239 (517)
++..|+||||++||+|.+++.... .++... +..++.|++.||.|||++ +
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~~ 124 (331)
T cd06649 75 DGEISICMEHMDGGSLDQVLKEAK--RIPEEI----------------------------LGKVSIAVLRGLAYLREKHQ 124 (331)
T ss_pred CCEEEEEeecCCCCcHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999887642 222222 236789999999999986 6
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||++.....
T Consensus 125 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------------------------------------------------ 156 (331)
T cd06649 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------------------------------------------------ 156 (331)
T ss_pred EEcCCCChhhEEEcCCCcEEEccCcccccccc------------------------------------------------
Confidence 99999999999999999999999999743210
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 --------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 157 --------------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred --------------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 011234689999999999998899999999999999999999999987
Q ss_pred CChHHHHHHHhcCCCC-----CCC----C-----C--------------------------CCCchhHHhhhhHHHHHHH
Q 010140 400 ENNEKTLINILKKPLT-----FPR----I-----G--------------------------VSSSKEFEEVVKLQDLISK 439 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~-----~p~----~-----~--------------------------~~~~~~~~~~~~l~dLi~~ 439 (517)
.+..+... +...... .+. . . ...........++++||.+
T Consensus 205 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 283 (331)
T cd06649 205 PDAKELEA-IFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNK 283 (331)
T ss_pred CCHHHHHH-HhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHH
Confidence 66544322 2211000 000 0 0 0000000123468999999
Q ss_pred hccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 440 LLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 440 ~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
||++||++|||+. ||++||||+....
T Consensus 284 ~L~~~P~~Rpt~~----ell~h~~~~~~~~ 309 (331)
T cd06649 284 CLIKNPAERADLK----MLMNHTFIKRSEV 309 (331)
T ss_pred HccCCcccCCCHH----HHhcChHHhhccc
Confidence 9999999999998 9999999986543
No 104
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.9e-46 Score=387.27 Aligned_cols=267 Identities=25% Similarity=0.393 Sum_probs=200.9
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
....++|++++.||+|+||.||+|.+.. +++.||||.+.... ....+|+.+|+.++|||||+++++|.
T Consensus 62 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~~-----~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~ 129 (440)
T PTZ00036 62 RSPNKSYKLGNIIGNGSFGVVYEAICID-----TSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYY 129 (440)
T ss_pred cCcCCeEEEeEEEEeCCCEEEEEEEECC-----CCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEe
Confidence 3455789999999999999999999876 67889999886432 12235999999999999999998774
Q ss_pred c--------CceeEEEEEecCCCchhHHHHhCCC--CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHH
Q 010140 160 A--------SHYSCLVMEYCPGGDLYAARQRQPG--KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETL 229 (517)
Q Consensus 160 ~--------~~~~~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~ 229 (517)
. ...+|+||||++ ++|.+++..... ..+++. .++.|+.||+
T Consensus 130 ~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~----------------------------~~~~~~~qi~ 180 (440)
T PTZ00036 130 TECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLF----------------------------LVKLYSYQLC 180 (440)
T ss_pred ecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHH----------------------------HHHHHHHHHH
Confidence 2 235789999996 578777654321 222222 2346789999
Q ss_pred HHHHHHHhcCceeccCCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccc
Q 010140 230 LALEYLHMMGIVYRDLKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFS 308 (517)
Q Consensus 230 ~aL~yLH~~~iiHrDLKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (517)
.||+|||++|||||||||+|||++.++ .+||+|||+|+.+..
T Consensus 181 ~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~------------------------------------- 223 (440)
T PTZ00036 181 RALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLA------------------------------------- 223 (440)
T ss_pred HHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccC-------------------------------------
Confidence 999999999999999999999998665 799999999843221
Q ss_pred ccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHH
Q 010140 309 SVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFL 387 (517)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil 387 (517)
.......+||+.|+|||++.+. .|+.++|||||||++
T Consensus 224 ------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil 261 (440)
T PTZ00036 224 ------------------------------------------GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCII 261 (440)
T ss_pred ------------------------------------------CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHH
Confidence 0011234689999999998765 589999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHHhcCC-----------------CCCCCCCCCCch-hH--HhhhhHHHHHHHhccCCccc
Q 010140 388 YEMLYGTTPFKGENNEKTLINILKKP-----------------LTFPRIGVSSSK-EF--EEVVKLQDLISKLLVKNPKK 447 (517)
Q Consensus 388 ~elltG~~Pf~~~~~~~~~~~i~~~~-----------------~~~p~~~~~~~~-~~--~~~~~l~dLi~~~L~~dP~~ 447 (517)
|||++|.+||.+.+..+.+.++.... ..+|........ .+ ..+.++.+||.+||++||.+
T Consensus 262 ~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~ 341 (440)
T PTZ00036 262 AEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLK 341 (440)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhH
Confidence 99999999999987776666554311 111111100000 00 12346899999999999999
Q ss_pred ccCCCCChHHhhcCCCcCCCCcc
Q 010140 448 RIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 448 R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
|||+. |+|+||||+.+...
T Consensus 342 R~ta~----e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 342 RLNPI----EALADPFFDDLRDP 360 (440)
T ss_pred CcCHH----HHhCChhHHhhhcc
Confidence 99998 99999999876553
No 105
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.3e-45 Score=373.77 Aligned_cols=256 Identities=27% Similarity=0.368 Sum_probs=196.2
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...++|+++++||+|+||.||+|++.. +++.||||++..... ......+.+|+.+|+.++|+||+++++++..
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 143 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRP-----TGRLYALKVIYGNHE--DTVRRQICREIEILRDVNHPNVVKCHDMFDH 143 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECC-----CCCEEEEEEEecCCc--HHHHHHHHHHHHHHHhCCCCCcceeeeEecc
Confidence 345678899999999999999999876 678899999864421 2334567789999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
++.+|+||||+++|+|..... ... ..+..++.||+.||+|||++||
T Consensus 144 ~~~~~lv~e~~~~~~L~~~~~------~~~----------------------------~~~~~i~~qi~~aL~~LH~~~i 189 (353)
T PLN00034 144 NGEIQVLLEFMDGGSLEGTHI------ADE----------------------------QFLADVARQILSGIAYLHRRHI 189 (353)
T ss_pred CCeEEEEEecCCCCccccccc------CCH----------------------------HHHHHHHHHHHHHHHHHHHCCE
Confidence 999999999999999854211 111 1123678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.+...
T Consensus 190 vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~------------------------------------------------ 221 (353)
T PLN00034 190 VHRDIKPSNLLINSAKNVKIADFGVSRILAQT------------------------------------------------ 221 (353)
T ss_pred eecCCCHHHEEEcCCCCEEEcccccceecccc------------------------------------------------
Confidence 99999999999999999999999998432210
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~ 395 (517)
.......+||..|+|||++.. ...+.++|||||||++|||++|+.
T Consensus 222 ------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~ 271 (353)
T PLN00034 222 ------------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRF 271 (353)
T ss_pred ------------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCC
Confidence 001123469999999999843 234678999999999999999999
Q ss_pred CCCCCChHH---HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 396 PFKGENNEK---TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 396 Pf~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
||......+ ....+..... +..... ...++++||.+||+.||++||++. |+++||||.+.
T Consensus 272 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~l~~li~~~l~~~P~~Rpt~~----ell~hp~~~~~ 334 (353)
T PLN00034 272 PFGVGRQGDWASLMCAICMSQP--PEAPAT------ASREFRHFISCCLQREPAKRWSAM----QLLQHPFILRA 334 (353)
T ss_pred CCCCCCCccHHHHHHHHhccCC--CCCCCc------cCHHHHHHHHHHccCChhhCcCHH----HHhcCcccccC
Confidence 997443222 2222222111 111111 123589999999999999999998 99999999875
No 106
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.3e-46 Score=366.82 Aligned_cols=264 Identities=26% Similarity=0.330 Sum_probs=199.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc---CCCCccceeeeee-
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFE- 159 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~- 159 (517)
++|++++.||+|+||.||+|++... .++.||+|++...... ........+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~ 75 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKN----GGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 75 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCC----CCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEec
Confidence 3799999999999999999998642 4578999998643211 11122344577666665 6999999999885
Q ss_pred ----cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 160 ----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 160 ----~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
....+|+||||++ ++|.+++.......++... ++.++.||+.||+||
T Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~----------------------------~~~i~~qi~~aL~~l 126 (290)
T cd07862 76 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTET----------------------------IKDMMFQLLRGLDFL 126 (290)
T ss_pred ccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHH----------------------------HHHHHHHHHHHHHHH
Confidence 3456899999995 6999888765433333322 236789999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|++||+||||||+|||++.++.+||+|||+++.....
T Consensus 127 H~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------- 163 (290)
T cd07862 127 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ------------------------------------------- 163 (290)
T ss_pred HHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC-------------------------------------------
Confidence 9999999999999999999999999999998432110
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~ 395 (517)
.......||+.|+|||++.+..++.++|||||||++|||++|.+
T Consensus 164 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 207 (290)
T cd07862 164 ------------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 207 (290)
T ss_pred ------------------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCC
Confidence 01223468999999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCC----------------Cchh--HHhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVS----------------SSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~----------------~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
||.+.+..+.+..+............+ .... ......+++||.+||+.||++||++. |
T Consensus 208 ~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~----~ 283 (290)
T cd07862 208 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY----S 283 (290)
T ss_pred CcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH----H
Confidence 999988877777775421110000000 0000 01223578999999999999999998 9
Q ss_pred hhcCCCc
Q 010140 458 IKRHEFF 464 (517)
Q Consensus 458 ll~hp~f 464 (517)
+++||||
T Consensus 284 ~l~hp~f 290 (290)
T cd07862 284 ALSHPYF 290 (290)
T ss_pred HhcCCCC
Confidence 9999998
No 107
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.2e-46 Score=374.45 Aligned_cols=270 Identities=24% Similarity=0.289 Sum_probs=200.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC---
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--- 161 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--- 161 (517)
+|++.+.||+|+||.||+|+++. +++.||||++...... .....++.+|+.+++.++||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTH-----TGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECC-----CCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence 58999999999999999999886 6789999998743211 22334667899999999999999999988533
Q ss_pred --ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
..+|+||||| +++|.+++.... .++... ++.++.||+.||+|||++|
T Consensus 75 ~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~----------------------------~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 75 EFKDIYVVFELM-ESDLHQVIKAND--DLTPEH----------------------------HQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred CCceEEEEEecC-CCCHHHHHHhcc--cCCHHH----------------------------HHHHHHHHHHHHHHHHHCC
Confidence 3589999999 578988876542 233222 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||+++.......
T Consensus 124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------- 158 (338)
T cd07859 124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTP--------------------------------------------- 158 (338)
T ss_pred eecCCCCHHHeEECCCCcEEEccCccccccccccC---------------------------------------------
Confidence 99999999999999999999999999843211000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC--CCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~--~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
........+||+.|+|||++.+ ..++.++|||||||++|||++|++||
T Consensus 159 ------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf 208 (338)
T cd07859 159 ------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 208 (338)
T ss_pred ------------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCC
Confidence 0001123579999999999876 56899999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCCCC---------------------CCCCCCchh-HHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 398 KGENNEKTLINILKKPLTFP---------------------RIGVSSSKE-FEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p---------------------~~~~~~~~~-~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
.+.+....+..+.......+ ......... ......+.+||.+||+.||++||++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~--- 285 (338)
T cd07859 209 PGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAE--- 285 (338)
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHH---
Confidence 87765433322211000000 000000000 01123578999999999999999998
Q ss_pred HHhhcCCCcCCCCcc
Q 010140 456 VEIKRHEFFKGINWA 470 (517)
Q Consensus 456 ~ell~hp~f~~~~~~ 470 (517)
|+++||||+++...
T Consensus 286 -e~l~hp~f~~~~~~ 299 (338)
T cd07859 286 -EALADPYFKGLAKV 299 (338)
T ss_pred -HHhcCchhhhcCcc
Confidence 99999999987653
No 108
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=8.6e-45 Score=360.37 Aligned_cols=290 Identities=37% Similarity=0.680 Sum_probs=226.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||++.++. +++.||+|.+.............+..|+.+++.++||||+++++.+..+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKE-----TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECC-----CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCE
Confidence 479999999999999999999886 678899999987755444556677789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||++|++|.+++.... .+++... +.++.|++.||+|||++||+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~----------------------------~~~~~~i~~~l~~lH~~~i~H~ 125 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG--ALPVDMA----------------------------RMYFAETVLALEYLHNYGIVHR 125 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCcccc
Confidence 999999999999999986642 2222222 3567899999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.+||+|||+++......... .
T Consensus 126 dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~-----------------------~----------------------- 159 (305)
T cd05609 126 DLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN-----------------------L----------------------- 159 (305)
T ss_pred CCchHHEEECCCCCEEEeeCCCccccCcCcccc-----------------------c-----------------------
Confidence 999999999999999999999884321000000 0
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
... ...............|+..|+|||.+.+..++.++|||||||++|||++|..||.+....
T Consensus 160 ------~~~-----------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~ 222 (305)
T cd05609 160 ------YEG-----------HIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222 (305)
T ss_pred ------ccc-----------ccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 000 000000000112345888999999999888999999999999999999999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPP 478 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~ 478 (517)
+.+..+.......|......+ .++.+||.+||+.||++||++ ..+.++++||||...+|+.+......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~------~~~~~li~~~l~~~P~~R~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~ 290 (305)
T cd05609 223 ELFGQVISDDIEWPEGDEALP------ADAQDLISRLLRQNPLERLGT-GGAFEVKQHRFFLGLDWNGLLRQKAE 290 (305)
T ss_pred HHHHHHHhcccCCCCccccCC------HHHHHHHHHHhccChhhccCc-cCHHHHHhCccccCCCHHHHhhcCCC
Confidence 877777766555544332222 248999999999999999997 34559999999999999877655443
No 109
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-47 Score=374.11 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=205.9
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
.+.+..+.+.+++.||+|.||.||+|.++. ...||+|.++...+ ..+.+.+|+.+|++|+|+|||+|+++
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~------~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV 269 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNG------STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGV 269 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcC------CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEE
Confidence 344555677889999999999999999986 34689999876532 23455679999999999999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+..++.+||||||++.|+|.++|+...+..+..... ..|+.|||+|++||++
T Consensus 270 ~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~L----------------------------l~~a~qIaeGM~YLes 321 (468)
T KOG0197|consen 270 CTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQL----------------------------LDFAAQIAEGMAYLES 321 (468)
T ss_pred EecCCceEEEEEecccCcHHHHhhhcCCCccchHHH----------------------------HHHHHHHHHHHHHHHh
Confidence 999999999999999999999998854444444332 3789999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+++|||||..+||||+.+..+||+|||+|+......-.
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~------------------------------------------ 359 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT------------------------------------------ 359 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCcee------------------------------------------
Confidence 99999999999999999999999999999733221110
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~P 396 (517)
......-...|.|||.+....++.++|||||||+||||+| |+.|
T Consensus 360 -----------------------------------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~p 404 (468)
T KOG0197|consen 360 -----------------------------------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVP 404 (468)
T ss_pred -----------------------------------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCC
Confidence 0011123457999999999999999999999999999997 9999
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
|.+.+..+++..+.++.....+..++ ..+.+||..||..+|++|||++
T Consensus 405 y~~msn~ev~~~le~GyRlp~P~~CP--------~~vY~lM~~CW~~~P~~RPtF~ 452 (468)
T KOG0197|consen 405 YPGMSNEEVLELLERGYRLPRPEGCP--------DEVYELMKSCWHEDPEDRPTFE 452 (468)
T ss_pred CCCCCHHHHHHHHhccCcCCCCCCCC--------HHHHHHHHHHhhCCcccCCCHH
Confidence 99999999998888765433322222 2589999999999999999995
No 110
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-45 Score=377.92 Aligned_cols=270 Identities=25% Similarity=0.389 Sum_probs=205.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++++.||+|+||.||+|...+. ..++.||+|.+.... ...+|+.+|+.++||||++++++|....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~---~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGD---EQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKS 159 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCC---ccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence 45799999999999999999986542 245789999986542 2345999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+|||++ +++|.+++... ..+++... +.|+.||+.||.|||++||||
T Consensus 160 ~~~lv~e~~-~~~l~~~l~~~--~~l~~~~~----------------------------~~i~~ql~~aL~~LH~~givH 208 (392)
T PHA03207 160 TVCMVMPKY-KCDLFTYVDRS--GPLPLEQA----------------------------ITIQRRLLEALAYLHGRGIIH 208 (392)
T ss_pred EEEEEehhc-CCCHHHHHHhc--CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCccc
Confidence 999999999 57888887432 23333222 377899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++.......
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~------------------------------------------------ 240 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPD------------------------------------------------ 240 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCccccccCcccc------------------------------------------------
Confidence 99999999999999999999999843321000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........||+.|+|||++.+..++.++|||||||++|||++|..||.+...
T Consensus 241 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 292 (392)
T PHA03207 241 ----------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQV 292 (392)
T ss_pred ----------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence 0112245799999999999998999999999999999999999999987542
Q ss_pred ---HHHHHHHhc----CCCCCCCCCC------------------CCc---hhHHhhhhHHHHHHHhccCCcccccCCCCC
Q 010140 403 ---EKTLINILK----KPLTFPRIGV------------------SSS---KEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454 (517)
Q Consensus 403 ---~~~~~~i~~----~~~~~p~~~~------------------~~~---~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~ 454 (517)
...+..+.. ....++.... ... .......++++||.+||..||++||++.
T Consensus 293 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~-- 370 (392)
T PHA03207 293 KSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQ-- 370 (392)
T ss_pred CCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHH--
Confidence 222222222 1111111000 000 0011234688999999999999999998
Q ss_pred hHHhhcCCCcCCCCcccccC
Q 010140 455 SVEIKRHEFFKGINWALIRS 474 (517)
Q Consensus 455 ~~ell~hp~f~~~~~~~~~~ 474 (517)
|+|+||||...+|+.++-
T Consensus 371 --e~l~~p~f~~~~~~~~~~ 388 (392)
T PHA03207 371 --DILSLPLFTKEPINLLNI 388 (392)
T ss_pred --HHhhCchhhccchhhhcC
Confidence 999999999999987654
No 111
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.1e-45 Score=368.90 Aligned_cols=289 Identities=20% Similarity=0.229 Sum_probs=200.8
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
+++..++|++.+.||+|+||.||+|.+.......+++.||||++..... ......+..|+.+|..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT--ASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc--hHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 4567789999999999999999999875432223567899999875422 12345677799999999 89999999998
Q ss_pred eec-CceeEEEEEecCCCchhHHHHhCCCCccCccch--h--hhhh------------------hhh-hhhhcC------
Q 010140 158 FEA-SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSA--K--FVFF------------------LLF-FFFYNN------ 207 (517)
Q Consensus 158 ~~~-~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~--~--~~~~------------------~l~-~~~~~~------ 207 (517)
+.. ++.+|+|||||++|+|.+++...........+. . ..+. .++ .+....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 865 456899999999999999987642110000000 0 0000 000 000000
Q ss_pred ---CccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHH
Q 010140 208 ---LGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEA 284 (517)
Q Consensus 208 ---~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~ 284 (517)
.............+..|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~---------- 229 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---------- 229 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc----------
Confidence 0000112233445667899999999999999999999999999999999999999999853221000
Q ss_pred HhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcc
Q 010140 285 IEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYL 364 (517)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 364 (517)
........+++.|+
T Consensus 230 ------------------------------------------------------------------~~~~~~~~~~~~y~ 243 (338)
T cd05102 230 ------------------------------------------------------------------YVRKGSARLPLKWM 243 (338)
T ss_pred ------------------------------------------------------------------hhcccCCCCCcccc
Confidence 00112234678899
Q ss_pred cchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccC
Q 010140 365 APEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVK 443 (517)
Q Consensus 365 APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~ 443 (517)
|||++.+..++.++|||||||++|||++ |..||.+....+.+............ ... ....+.+||.+||+.
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~l~~li~~cl~~ 316 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA-PEN------ATPEIYRIMLACWQG 316 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC-CCC------CCHHHHHHHHHHccC
Confidence 9999999889999999999999999997 99999886654444333332211111 111 123589999999999
Q ss_pred CcccccCCC
Q 010140 444 NPKKRIGSL 452 (517)
Q Consensus 444 dP~~R~t~~ 452 (517)
||++||++.
T Consensus 317 dp~~RPs~~ 325 (338)
T cd05102 317 DPKERPTFS 325 (338)
T ss_pred ChhhCcCHH
Confidence 999999997
No 112
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.3e-45 Score=369.74 Aligned_cols=262 Identities=28% Similarity=0.422 Sum_probs=197.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|++.. +++.||+|++...... ......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 93 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTV-----LGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK 93 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcC-----CCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence 4789999999999999999999876 6789999998754221 233455667999999999999999999986543
Q ss_pred ------eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 163 ------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 163 ------~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
.+|+||||++ ++|.+.+.. .+.... ++.++.||+.||+|||
T Consensus 94 ~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~----------------------------~~~~~~qi~~~L~~LH 140 (359)
T cd07876 94 SLEEFQDVYLVMELMD-ANLCQVIHM----ELDHER----------------------------MSYLLYQMLCGIKHLH 140 (359)
T ss_pred CccccceeEEEEeCCC-cCHHHHHhc----cCCHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 5799999995 466665532 122211 2367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.+|.+||+|||+++....
T Consensus 141 ~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~--------------------------------------------- 175 (359)
T cd07876 141 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT--------------------------------------------- 175 (359)
T ss_pred hCCcccCCCCHHHEEECCCCCEEEecCCCcccccc---------------------------------------------
Confidence 99999999999999999999999999999842110
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
........||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus 176 ----------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~p 221 (359)
T cd07876 176 ----------------------------------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI 221 (359)
T ss_pred ----------------------------------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 0011234689999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcC----------------------CCCCCCCC---------CCCc--hhHHhhhhHHHHHHHhccC
Q 010140 397 FKGENNEKTLINILKK----------------------PLTFPRIG---------VSSS--KEFEEVVKLQDLISKLLVK 443 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~----------------------~~~~p~~~---------~~~~--~~~~~~~~l~dLi~~~L~~ 443 (517)
|.+.+....+..+... ....+... .... .......++++||.+||+.
T Consensus 222 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 301 (359)
T cd07876 222 FQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVI 301 (359)
T ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhcc
Confidence 9987654443332211 11111000 0000 0001123589999999999
Q ss_pred CcccccCCCCChHHhhcCCCcCC
Q 010140 444 NPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 444 dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
||++|||+. |+|+||||..
T Consensus 302 dP~~R~t~~----e~l~hp~~~~ 320 (359)
T cd07876 302 DPDKRISVD----EALRHPYITV 320 (359)
T ss_pred CcccCCCHH----HHhcCchhhh
Confidence 999999998 9999999974
No 113
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.5e-45 Score=364.74 Aligned_cols=266 Identities=25% Similarity=0.345 Sum_probs=203.3
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.++||+|+||.||+|++.. ++..+|+|++..... ......+.+|+.+++.++||||++++++|..
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKP-----SGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECC-----CCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCcccceeEEEEE
Confidence 345789999999999999999999886 678899998865421 1234567779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc-C
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM-G 239 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ 239 (517)
++.+|+||||++||+|.+++.... .++... ++.++.||+.||.|||++ +
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~----------------------------~~~~~~~l~~~l~~lH~~~~ 124 (333)
T cd06650 75 DGEISICMEHMDGGSLDQVLKKAG--RIPEQI----------------------------LGKVSIAVIKGLTYLREKHK 124 (333)
T ss_pred CCEEEEEEecCCCCcHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999887542 222221 236788999999999985 7
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||++.....
T Consensus 125 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~------------------------------------------------ 156 (333)
T cd06650 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------------------------------------------------ 156 (333)
T ss_pred EEecCCChhhEEEcCCCCEEEeeCCcchhhhh------------------------------------------------
Confidence 99999999999999999999999999732210
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 157 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 157 --------------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred --------------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 001234689999999999988899999999999999999999999987
Q ss_pred CChHHHHHHHhc---CCCCC------------------CCCCC----------------CCchhHHhhhhHHHHHHHhcc
Q 010140 400 ENNEKTLINILK---KPLTF------------------PRIGV----------------SSSKEFEEVVKLQDLISKLLV 442 (517)
Q Consensus 400 ~~~~~~~~~i~~---~~~~~------------------p~~~~----------------~~~~~~~~~~~l~dLi~~~L~ 442 (517)
.........+.. +.... |.... ..........++++||.+||+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 284 (333)
T cd06650 205 PDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLI 284 (333)
T ss_pred cchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhcc
Confidence 654333221110 00000 00000 000000012358899999999
Q ss_pred CCcccccCCCCChHHhhcCCCcCCC
Q 010140 443 KNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 443 ~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
+||++||++. |+++||||+..
T Consensus 285 ~~P~~Rpt~~----ell~h~~~~~~ 305 (333)
T cd06650 285 KNPAERADLK----QLMVHAFIKRS 305 (333)
T ss_pred CCcccCcCHH----HHhhCHHHhcC
Confidence 9999999998 99999999864
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-44 Score=368.38 Aligned_cols=262 Identities=27% Similarity=0.386 Sum_probs=200.3
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
.++|++.+.||+|+||.||+|.+.. .++.||||++...... ......+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~ 96 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAI-----LERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECC-----CCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence 4789999999999999999999876 6788999998754221 22345566799999999999999999988543
Q ss_pred -----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
..+|+||||++ ++|...+... +... .++.++.||+.||+|||
T Consensus 97 ~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~----------------------------~~~~~~~qi~~aL~~LH 143 (364)
T cd07875 97 SLEEFQDVYIVMELMD-ANLCQVIQME----LDHE----------------------------RMSYLLYQMLCGIKHLH 143 (364)
T ss_pred cccccCeEEEEEeCCC-CCHHHHHHhc----CCHH----------------------------HHHHHHHHHHHHHHHHh
Confidence 35799999995 5777666431 1111 12367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.++.+||+|||+++....
T Consensus 144 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--------------------------------------------- 178 (364)
T cd07875 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------------------------- 178 (364)
T ss_pred hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC---------------------------------------------
Confidence 99999999999999999999999999999843210
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
........||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus 179 ----------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~p 224 (364)
T cd07875 179 ----------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224 (364)
T ss_pred ----------------------------------CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCC
Confidence 0011234689999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCCCC-------------------CC------------CCCCCch--hHHhhhhHHHHHHHhccC
Q 010140 397 FKGENNEKTLINILKKPLTF-------------------PR------------IGVSSSK--EFEEVVKLQDLISKLLVK 443 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~-------------------p~------------~~~~~~~--~~~~~~~l~dLi~~~L~~ 443 (517)
|.+.+..+.+.+++...... |. ....... ......++++||.+||+.
T Consensus 225 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~ 304 (364)
T cd07875 225 FPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304 (364)
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCc
Confidence 99888766666554321110 00 0000000 001123588999999999
Q ss_pred CcccccCCCCChHHhhcCCCcCC
Q 010140 444 NPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 444 dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
||.+|||+. |+|+||||..
T Consensus 305 dP~~R~t~~----e~L~hp~~~~ 323 (364)
T cd07875 305 DASKRISVD----EALQHPYINV 323 (364)
T ss_pred CcccCCCHH----HHhcCccccc
Confidence 999999998 9999999973
No 115
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-44 Score=352.69 Aligned_cols=262 Identities=36% Similarity=0.591 Sum_probs=207.7
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||+|+||+||+|.++. +++.||+|++.+...........+..|+.+|+.++||||+++++++...+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKA-----TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcC-----CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence 6999999999999876 67889999998765444444556677999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
++++|.+++.......+++... +.++.||+.||.|||++|++||||+|+||+
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~----------------------------~~~~~ql~~~l~~lH~~~i~H~di~p~Nil 127 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARA----------------------------IFYAAQIICGLEHLHQRRIVYRDLKPENVL 127 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 9999999887654333333222 367899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.++|+|||++.....
T Consensus 128 ~~~~~~~~l~dfg~~~~~~~------------------------------------------------------------ 147 (277)
T cd05577 128 LDDHGNVRISDLGLAVELKG------------------------------------------------------------ 147 (277)
T ss_pred ECCCCCEEEccCcchhhhcc------------------------------------------------------------
Confidence 99999999999998733210
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH----HHHH
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE----KTLI 407 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~----~~~~ 407 (517)
........|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ....
T Consensus 148 -------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05577 148 -------------------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR 208 (277)
T ss_pred -------------------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence 00011235788999999998888999999999999999999999999876542 2222
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC-ChHHhhcCCCcCCCCcccccC
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIRS 474 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~-~~~ell~hp~f~~~~~~~~~~ 474 (517)
.+.......+.. ....+.++|.+||+.||.+||+..+ .+.++++||||+.++|..+..
T Consensus 209 ~~~~~~~~~~~~---------~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~ 267 (277)
T cd05577 209 RTLEMAVEYPDK---------FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEA 267 (277)
T ss_pred ccccccccCCcc---------CCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhc
Confidence 222222222211 1235899999999999999998876 677999999999999987743
No 116
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.9e-45 Score=362.25 Aligned_cols=266 Identities=26% Similarity=0.375 Sum_probs=202.3
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|.+++.||+|+||.||+|+++. +++.||+|.++..... .....+.+|+.+++.++||||+++++++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKL-----TENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK 77 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecC-----CCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC
Confidence 4789999999999999999999876 6788999998754221 22234556999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||++ ++|.+++.... ..+... .++.++.||+.||+|||++||+|
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~----------------------------~~~~~~~qi~~aL~~lH~~~ivH 127 (309)
T cd07872 78 SLTLVFEYLD-KDLKQYMDDCG-NIMSMH----------------------------NVKIFLYQILRGLAYCHRRKVLH 127 (309)
T ss_pred eEEEEEeCCC-CCHHHHHHhcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCeec
Confidence 9999999996 58888775532 112222 22467899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++......
T Consensus 128 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 158 (309)
T cd07872 128 RDLKPQNLLINERGELKLADFGLARAKSVPT------------------------------------------------- 158 (309)
T ss_pred CCCCHHHEEECCCCCEEECccccceecCCCc-------------------------------------------------
Confidence 9999999999999999999999984321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+
T Consensus 159 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 159 -----------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred -----------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123578999999998764 58999999999999999999999999887
Q ss_pred hHHHHHHHhcCCC-------------------CCCCCCCCC--chhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPL-------------------TFPRIGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~-------------------~~p~~~~~~--~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
..+.+..+..... .++...... ........++++||.+||+.||.+|||+. |+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~----e~l~ 285 (309)
T cd07872 210 VEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAE----EAMK 285 (309)
T ss_pred hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHH----HHhc
Confidence 6655544432110 011100000 00001234688999999999999999998 9999
Q ss_pred CCCcCCC
Q 010140 461 HEFFKGI 467 (517)
Q Consensus 461 hp~f~~~ 467 (517)
||||+.+
T Consensus 286 h~~~~~~ 292 (309)
T cd07872 286 HAYFRSL 292 (309)
T ss_pred Chhhhhc
Confidence 9999865
No 117
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.7e-45 Score=381.37 Aligned_cols=262 Identities=26% Similarity=0.353 Sum_probs=209.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
..|.+.+.||+|+||.||+|..... .+..||+|.+..... .....+.+|+.+|+.++|||||+++++|..++.
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~----~~~~vv~K~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~ 139 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSD----PKEKVVAKFVMLNDE---RQAAYARSELHCLAACDHFGIVKHFDDFKSDDK 139 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCC----CCeEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE
Confidence 4599999999999999999987652 257788887654322 233456679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+||||||++||+|.+++........+..+. .++.++.||+.||+|||++||+||
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~--------------------------~~~~i~~qi~~aL~~lH~~~ivHr 193 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEY--------------------------EVGLLFYQIVLALDEVHSRKMMHR 193 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHH--------------------------HHHHHHHHHHHHHHHHHhCCEEEC
Confidence 999999999999998876532222222211 223678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.+||+|||+++.+.....
T Consensus 194 Dlkp~NIll~~~~~~kL~DFgla~~~~~~~~------------------------------------------------- 224 (478)
T PTZ00267 194 DLKSANIFLMPTGIIKLGDFGFSKQYSDSVS------------------------------------------------- 224 (478)
T ss_pred CcCHHhEEECCCCcEEEEeCcCceecCCccc-------------------------------------------------
Confidence 9999999999999999999999854321000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 225 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~ 277 (478)
T PTZ00267 225 ---------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR 277 (478)
T ss_pred ---------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 01123457999999999999988999999999999999999999999998888
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
+.+..+..+...... .. ...++.+||.+||..||++||++. +++.|||++.
T Consensus 278 ~~~~~~~~~~~~~~~--~~------~s~~~~~li~~~L~~dP~~Rps~~----~~l~~~~~~~ 328 (478)
T PTZ00267 278 EIMQQVLYGKYDPFP--CP------VSSGMKALLDPLLSKNPALRPTTQ----QLLHTEFLKY 328 (478)
T ss_pred HHHHHHHhCCCCCCC--cc------CCHHHHHHHHHHhccChhhCcCHH----HHHhCHHHHH
Confidence 888877765433111 11 112589999999999999999998 9999999864
No 118
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=5.2e-45 Score=372.07 Aligned_cols=267 Identities=23% Similarity=0.294 Sum_probs=202.6
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc--
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-- 162 (517)
+|++++.||+|+||.||+|.+.. +++.||||.+...... .....++.+|+.+|+.++||||+++++++...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPR-----DGKRVALKKMPNVFQN-LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECC-----CCCEEEEEeccccccc-hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence 58899999999999999999876 6788999998643211 223456778999999999999999999998776
Q ss_pred ---eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 163 ---YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.+|+||||+. ++|.+++... ..+... .++.++.||+.||+|||++|
T Consensus 75 ~~~~~~lv~e~~~-~~l~~~~~~~--~~l~~~----------------------------~~~~~~~qi~~aL~~LH~~~ 123 (372)
T cd07853 75 PFEEIYVVTELMQ-SDLHKIIVSP--QPLSSD----------------------------HVKVFLYQILRGLKYLHSAG 123 (372)
T ss_pred ccceEEEEeeccc-cCHHHHHhcC--CCCCHH----------------------------HHHHHHHHHHHHHHHHHhCC
Confidence 7899999995 6888776543 222222 23467899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||+++......
T Consensus 124 ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~---------------------------------------------- 157 (372)
T cd07853 124 ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE---------------------------------------------- 157 (372)
T ss_pred eeCCCCChHHEEECCCCCEEeccccceeecccCc----------------------------------------------
Confidence 9999999999999999999999999984321100
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 158 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 158 -------------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred -------------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 00112336899999999998754 7999999999999999999999999
Q ss_pred CCChHHHHHHHhcC-----------------------CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 399 GENNEKTLINILKK-----------------------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 399 ~~~~~~~~~~i~~~-----------------------~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
+.+..+.+..+... ....+..............++.+||.+||+.||++|||+.
T Consensus 207 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~--- 283 (372)
T cd07853 207 AQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA--- 283 (372)
T ss_pred CCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHH---
Confidence 88776655544321 1111100000000001133589999999999999999998
Q ss_pred HHhhcCCCcCCCCc
Q 010140 456 VEIKRHEFFKGINW 469 (517)
Q Consensus 456 ~ell~hp~f~~~~~ 469 (517)
|+++||||++..+
T Consensus 284 -e~l~hp~~~~~~~ 296 (372)
T cd07853 284 -DALAHPYLDEGRL 296 (372)
T ss_pred -HHhcCHhhCCCcc
Confidence 9999999998654
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.5e-45 Score=381.82 Aligned_cols=266 Identities=26% Similarity=0.373 Sum_probs=210.6
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...++|++.+.||+|+||+||+|++.. +++.||||++...... ......+.+|+.++..++|+||+++++.+..
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~-----~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~ 102 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVS-----DGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAK 102 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcC-----CCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceec
Confidence 345799999999999999999999876 6789999998754322 2334566779999999999999999887753
Q ss_pred Cc--------eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH
Q 010140 161 SH--------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL 232 (517)
Q Consensus 161 ~~--------~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 232 (517)
.+ .+++||||+++|+|.+++.........+.+ ..++.++.||+.||
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e--------------------------~~~~~i~~qll~aL 156 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFRE--------------------------HEAGLLFIQVLLAV 156 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCH--------------------------HHHHHHHHHHHHHH
Confidence 22 378999999999999988654222111111 12246789999999
Q ss_pred HHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccc
Q 010140 233 EYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSH 312 (517)
Q Consensus 233 ~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (517)
+|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 157 ~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~--------------------------------------- 197 (496)
T PTZ00283 157 HHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATV--------------------------------------- 197 (496)
T ss_pred HHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccc---------------------------------------
Confidence 99999999999999999999999999999999985432100
Q ss_pred ccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh
Q 010140 313 GKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY 392 (517)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt 392 (517)
........+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 198 -------------------------------------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt 240 (496)
T PTZ00283 198 -------------------------------------SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240 (496)
T ss_pred -------------------------------------cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 0011234579999999999999889999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 393 GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 393 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
|+.||.+.+..+.+..+..+...... .. ...++.+||.+||+.||.+||++. ++++|||++.
T Consensus 241 G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~------~~~~l~~li~~~L~~dP~~RPs~~----ell~~p~~~~ 302 (496)
T PTZ00283 241 LKRPFDGENMEEVMHKTLAGRYDPLP--PS------ISPEMQEIVTALLSSDPKRRPSSS----KLLNMPICKL 302 (496)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCC--CC------CCHHHHHHHHHHcccChhhCcCHH----HHHhCHHHHH
Confidence 99999998888877777765432111 11 123589999999999999999998 9999999875
No 120
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=7.7e-45 Score=357.46 Aligned_cols=262 Identities=28% Similarity=0.374 Sum_probs=196.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc---CCCCccceeeeeec-
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEA- 160 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~- 160 (517)
+|++.+.||+|+||+||+|+++. +++.||+|.++..... ........+|+.+++.+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPH-----SGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATS 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECC-----CCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence 58999999999999999999987 6789999998653211 11122334566666655 79999999998864
Q ss_pred ----CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 161 ----SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 161 ----~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
....++||||++ ++|..++.......++.... +.++.||+.||.|||
T Consensus 75 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~qi~~al~~lH 125 (288)
T cd07863 75 RTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETI----------------------------KDLMRQFLRGLDFLH 125 (288)
T ss_pred cCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHH----------------------------HHHHHHHHHHHHHHH
Confidence 346899999996 58988887654333333332 367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.++.+||+|||+++.....
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~-------------------------------------------- 161 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ-------------------------------------------- 161 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCc--------------------------------------------
Confidence 999999999999999999999999999998432100
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
.......||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus 162 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~ 206 (288)
T cd07863 162 -----------------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 206 (288)
T ss_pred -----------------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence 001223689999999999988899999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCC-----CCCCCC-----------CCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHh
Q 010140 397 FKGENNEKTLINILKKP-----LTFPRI-----------GVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEI 458 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~-----~~~p~~-----------~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~el 458 (517)
|.+....+.+.++.... ..++.. ....... ......+.+||.+||+.||++||++. |+
T Consensus 207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~----~~ 282 (288)
T cd07863 207 FCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAF----RA 282 (288)
T ss_pred cCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHH----HH
Confidence 98887766665554311 011100 0000000 01223578999999999999999998 99
Q ss_pred hcCCCc
Q 010140 459 KRHEFF 464 (517)
Q Consensus 459 l~hp~f 464 (517)
+.||||
T Consensus 283 l~hp~f 288 (288)
T cd07863 283 LQHPFF 288 (288)
T ss_pred hcCCCC
Confidence 999998
No 121
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=340.17 Aligned_cols=263 Identities=30% Similarity=0.442 Sum_probs=214.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+|+.|--|.... ++..||||++.+.. .....++.+|++++..+ .|+||+.|+++|+++..+||||
T Consensus 84 e~LGeGAyasVqtcv~i~-----t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQ-----TGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhcCccceeeeeeeeec-----cchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 579999999999999887 67889999998763 24556788899999999 5999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
|-+.||.|...|+++ ..+.+.++. .++++|+.||.|||.+||.||||||+
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs----------------------------~vvkdia~aLdFlH~kgIAHRDlKPE 205 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREAS----------------------------RVVKDIASALDFLHTKGIAHRDLKPE 205 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHH----------------------------HHHHHHHHHHHHHhhcCcccccCCcc
Confidence 999999999998876 445555554 66799999999999999999999999
Q ss_pred ceEEccCC---cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 249 NVLVREDG---HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 249 NILl~~~~---~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
|||..... -||||||.+..-+.... .|+
T Consensus 206 NiLC~~pn~vsPvKiCDfDLgSg~k~~~---------------------~~s---------------------------- 236 (463)
T KOG0607|consen 206 NILCESPNKVSPVKICDFDLGSGIKLNN---------------------DCS---------------------------- 236 (463)
T ss_pred ceeecCCCCcCceeeeccccccccccCC---------------------CCC----------------------------
Confidence 99997554 48999999873221100 000
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc---C--CCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---G--QGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~---~--~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
........+.+|+..|||||+.. + ..|+.++|.||||||||-|+.|.+||.|.
T Consensus 237 ----------------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 237 ----------------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred ----------------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 00122345678999999999863 3 34899999999999999999999999763
Q ss_pred C---------------hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 401 N---------------NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 401 ~---------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
- ...++..|..+.+.||...+.. ++.+.+|||..+|..|+.+|.++. ++++|||++
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah-----IS~eakdlisnLlvrda~~rlsa~----~vlnhPw~~ 365 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH-----ISSEAKDLISNLLVRDAKQRLSAA----QVLNHPWVQ 365 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH-----hhHHHHHHHHHHHhccHHhhhhhh----hccCCcccc
Confidence 1 2467888999999999765443 344689999999999999999998 999999999
Q ss_pred CCCcc
Q 010140 466 GINWA 470 (517)
Q Consensus 466 ~~~~~ 470 (517)
.+..+
T Consensus 366 ~~~~e 370 (463)
T KOG0607|consen 366 RCAPE 370 (463)
T ss_pred ccchh
Confidence 87655
No 122
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=339.18 Aligned_cols=256 Identities=29% Similarity=0.429 Sum_probs=213.8
Q ss_pred CCCceEE-eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec
Q 010140 83 LDHFRLL-RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA 160 (517)
Q Consensus 83 ~~~y~i~-~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~ 160 (517)
+++|.+- ++||-|-.|.|..|.++. +++.+|+|++.... ...+|+++.-.. .|||||.++++|++
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~-----T~ekfALKvL~Ds~--------KARrEVeLHw~~s~h~~iV~IidVyeN 126 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKR-----TQEKFALKVLLDSP--------KARREVELHWMASGHPHIVSIIDVYEN 126 (400)
T ss_pred hhhheehhhhhccccCCceEEEEecc-----chhhhHHHHHhcCH--------HHHhHhhhhhhhcCCCceEEeehhhhh
Confidence 4677765 679999999999999998 78999999986542 223477766555 69999999999865
Q ss_pred ----CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 161 ----SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 161 ----~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
...+.+|||.++||+|+..++.++...+++.++. .|++||..||.|||
T Consensus 127 s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~----------------------------eI~~qI~~Av~~lH 178 (400)
T KOG0604|consen 127 SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREAS----------------------------EIMKQIGLAVRYLH 178 (400)
T ss_pred hccCceeeEeeeecccchHHHHHHHHcccccchHHHHH----------------------------HHHHHHHHHHHHHH
Confidence 4567899999999999999999887778877766 67899999999999
Q ss_pred hcCceeccCCCCceEEcc---CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVRE---DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~---~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
+.+|.||||||||+|... |..+||+|||+|+.-..
T Consensus 179 ~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~------------------------------------------ 216 (400)
T KOG0604|consen 179 SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE------------------------------------------ 216 (400)
T ss_pred hcchhhccCChhheeeecCCCCcceEecccccccccCC------------------------------------------
Confidence 999999999999999964 45799999999953211
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhC
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG 393 (517)
.....+.|-||+|.|||++....|+..+|+||+||++|-|++|
T Consensus 217 -------------------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 217 -------------------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred -------------------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 1123456889999999999999999999999999999999999
Q ss_pred CCCCCCCC----hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 394 TTPFKGEN----NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 394 ~~Pf~~~~----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
.+||.... ...+..+|..+.+.||...+.. .+...+|+|++||..+|.+|+|+. +++.|||+.+-
T Consensus 260 yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~-----VSe~aKdlIR~LLkt~PteRlTI~----~~m~hpwi~~~ 328 (400)
T KOG0604|consen 260 YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSC-----VSEAAKDLIRKLLKTEPTERLTIE----EVMDHPWINQY 328 (400)
T ss_pred CCcccccCCccCChhHHhHhhccCccCCChhHhH-----HHHHHHHHHHHHhcCCchhheeHH----HhhcCchhccc
Confidence 99998653 2456778889999998655443 344789999999999999999998 99999999764
No 123
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-44 Score=364.56 Aligned_cols=258 Identities=22% Similarity=0.359 Sum_probs=193.0
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++++.||+|+||.||+|++.. +++.||+|+..+.. ...|+.+++.++||||+++++++....
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~ 130 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPG-----QPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGA 130 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECC-----CCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCC
Confidence 3579999999999999999999876 56789999865432 234899999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+ .++|..++.... ..+++.. ++.|+.||+.||.|||++||||
T Consensus 131 ~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~----------------------------~~~i~~qi~~aL~~LH~~~ivH 180 (357)
T PHA03209 131 ITCMVLPHY-SSDLYTYLTKRS-RPLPIDQ----------------------------ALIIEKQILEGLRYLHAQRIIH 180 (357)
T ss_pred eeEEEEEcc-CCcHHHHHHhcc-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeec
Confidence 999999999 568888876532 2232222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++....
T Consensus 181 rDlkp~Nill~~~~~~kl~DfG~a~~~~~--------------------------------------------------- 209 (357)
T PHA03209 181 RDVKTENIFINDVDQVCIGDLGAAQFPVV--------------------------------------------------- 209 (357)
T ss_pred CCCCHHHEEECCCCCEEEecCcccccccc---------------------------------------------------
Confidence 99999999999999999999998732110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC-CCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P-f~~~~ 401 (517)
........||+.|+|||++.+..++.++|||||||++|||+++..| |....
T Consensus 210 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~ 261 (357)
T PHA03209 210 ----------------------------APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPP 261 (357)
T ss_pred ----------------------------CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCC
Confidence 0011234689999999999998999999999999999999986544 44321
Q ss_pred h---------HHHHHHHhcC----CCCCCCCCC---------------------CCchhHHhhhhHHHHHHHhccCCccc
Q 010140 402 N---------EKTLINILKK----PLTFPRIGV---------------------SSSKEFEEVVKLQDLISKLLVKNPKK 447 (517)
Q Consensus 402 ~---------~~~~~~i~~~----~~~~p~~~~---------------------~~~~~~~~~~~l~dLi~~~L~~dP~~ 447 (517)
. ...+..+... +..++.... ..........++.+||.+||+.||.+
T Consensus 262 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 341 (357)
T PHA03209 262 STPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAM 341 (357)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCccc
Confidence 1 1112222211 111110000 00001112335778999999999999
Q ss_pred ccCCCCChHHhhcCCCcCCC
Q 010140 448 RIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 448 R~t~~~~~~ell~hp~f~~~ 467 (517)
|||+. |+|+||||+.+
T Consensus 342 Rpta~----e~l~hp~f~~~ 357 (357)
T PHA03209 342 RPSAE----EILNYPMFAQL 357 (357)
T ss_pred CcCHH----HHhcCchhccC
Confidence 99998 99999999864
No 124
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.6e-45 Score=363.58 Aligned_cols=258 Identities=30% Similarity=0.491 Sum_probs=224.5
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...+.|.+++.||+|.|+.|.+|++.. ++..||||++.+........ ..+.+|+.+|+.|+|||||+++.+.+.
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~-----t~~~VaiK~idkt~ln~~~~-~k~~rev~imk~l~HPnIvkl~~v~~t 126 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHIL-----TGTEVAIKIIDKTQLNPSKR-QKLGREVDIMKSLNHPNIVKLFSVIET 126 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecC-----CCceEEEEEehhcccChHHH-HHHHHHHHHHHhcCCcceeeeeeeeee
Confidence 345789999999999999999999987 67889999999887664433 347789999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...+|+||||+.+|++++++.++.. .....+ +.+..|++.|++|||+++|
T Consensus 127 ~~~lylV~eya~~ge~~~yl~~~gr--~~e~~a----------------------------r~~F~q~vsaveYcH~k~i 176 (596)
T KOG0586|consen 127 EATLYLVMEYASGGELFDYLVKHGR--MKEKEA----------------------------RAKFRQIVSAVEYCHSKNI 176 (596)
T ss_pred cceeEEEEEeccCchhHHHHHhccc--chhhhh----------------------------hhhhHHHHHHHHHHhhcce
Confidence 9999999999999999999988743 222333 3556899999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
||||||++||||+.+.++||+|||++..+..
T Consensus 177 vHrdLk~eNilL~~~mnikIaDfgfS~~~~~------------------------------------------------- 207 (596)
T KOG0586|consen 177 VHRDLKAENILLDENMNIKIADFGFSTFFDY------------------------------------------------- 207 (596)
T ss_pred eccccchhhcccccccceeeeccccceeecc-------------------------------------------------
Confidence 9999999999999999999999999855432
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC-CccchHHHHHHHHHHHhhCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~-~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.....++||++.|.|||++.|..| ++.+|+||+|+++|.|+.|..||++
T Consensus 208 ------------------------------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG 257 (596)
T KOG0586|consen 208 ------------------------------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG 257 (596)
T ss_pred ------------------------------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC
Confidence 223457799999999999999987 7899999999999999999999999
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
.+-.+...+.+.+.+..|..... ++.+||+++|..+|.+|++.. ++..|.|...
T Consensus 258 ~~lk~Lr~rvl~gk~rIp~~ms~---------dce~lLrk~lvl~Pskr~~~d----qim~~~W~n~ 311 (596)
T KOG0586|consen 258 QNLKELRPRVLRGKYRIPFYMSC---------DCEDLLRKFLVLNPSKRGPCD----QIMKDRWRND 311 (596)
T ss_pred cccccccchheeeeecccceeec---------hhHHHHHHhhccCccccCCHH----Hhhhhcccch
Confidence 99888888888887777655443 488999999999999999998 9999999864
No 125
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.8e-44 Score=352.01 Aligned_cols=284 Identities=22% Similarity=0.258 Sum_probs=213.9
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+..++|++.+.||+|+||.||+|..++...+.....||+|.+...... .....+..|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL--RERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4566899999999999999999998775433335678999998644321 22334667999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.....|+||||+++|+|.+++........... .........++.++.||+.||.|||++|
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 139 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNP--------------------GRPPPTLQEMIQMAAEIADGMAYLNAKK 139 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999876421100000 0001112233578899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.++|+|||+++.......
T Consensus 140 i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~--------------------------------------------- 174 (288)
T cd05061 140 FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY--------------------------------------------- 174 (288)
T ss_pred CcCCCCChheEEEcCCCcEEECcCCcccccccccc---------------------------------------------
Confidence 99999999999999999999999999843221000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 175 -------------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~ 223 (288)
T cd05061 175 -------------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 223 (288)
T ss_pred -------------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 000112245678999999998889999999999999999998 799999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc--CCCcCCCCc
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR--HEFFKGINW 469 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~--hp~f~~~~~ 469 (517)
+....+....+......... .. ....+.++|.+||+.||++||++.+.++.+.+ ||||++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 224 GLSNEQVLKFVMDGGYLDQP--DN------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred CCCHHHHHHHHHcCCCCCCC--CC------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 88877776666554322111 11 12358999999999999999999744444443 999999998
No 126
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.9e-44 Score=365.62 Aligned_cols=262 Identities=27% Similarity=0.393 Sum_probs=197.8
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
.++|++.+.||+|+||.||+|.+.. .++.||||++...... .....++.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 89 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAV-----LDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 89 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecC-----CCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence 4789999999999999999999876 6788999998754221 23345566799999999999999999988643
Q ss_pred -----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
...|+||||++ ++|.+.+... +... .++.++.||+.||+|||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~l~~~~~~~----l~~~----------------------------~~~~~~~qi~~aL~~LH 136 (355)
T cd07874 90 SLEEFQDVYLVMELMD-ANLCQVIQME----LDHE----------------------------RMSYLLYQMLCGIKHLH 136 (355)
T ss_pred cccccceeEEEhhhhc-ccHHHHHhhc----CCHH----------------------------HHHHHHHHHHHHHHHHH
Confidence 35799999995 4676665431 2211 12367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.++.+||+|||+++....
T Consensus 137 ~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~--------------------------------------------- 171 (355)
T cd07874 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------------------------- 171 (355)
T ss_pred hCCcccCCCChHHEEECCCCCEEEeeCcccccCCC---------------------------------------------
Confidence 99999999999999999999999999999843210
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
........||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus 172 ----------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 217 (355)
T cd07874 172 ----------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217 (355)
T ss_pred ----------------------------------ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0011234689999999999998999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCC----------------------CC-----CCC----CCCCCch--hHHhhhhHHHHHHHhccC
Q 010140 397 FKGENNEKTLINILKKP----------------------LT-----FPR----IGVSSSK--EFEEVVKLQDLISKLLVK 443 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~----------------------~~-----~p~----~~~~~~~--~~~~~~~l~dLi~~~L~~ 443 (517)
|.+.+..+.+..+.... .. ++. ....... ......++++||.+||+.
T Consensus 218 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 297 (355)
T cd07874 218 FPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297 (355)
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcC
Confidence 99876554443332210 00 000 0000000 001123578999999999
Q ss_pred CcccccCCCCChHHhhcCCCcCC
Q 010140 444 NPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 444 dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
||++|||+. |+|+||||..
T Consensus 298 dP~~Rps~~----ell~hp~~~~ 316 (355)
T cd07874 298 DPAKRISVD----EALQHPYINV 316 (355)
T ss_pred CchhcCCHH----HHhcCcchhc
Confidence 999999998 9999999973
No 127
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-43 Score=385.16 Aligned_cols=152 Identities=35% Similarity=0.604 Sum_probs=131.5
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|.++++||+|+||.||+|.+.. +++.||||++.............+..|+.++..++||||+++++++....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKN-----NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC-----CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC
Confidence 4789999999999999999999886 67899999998655444445567788999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
++||||||+.|++|.+++.... .+.... ++.|+.||+.||+|||.+||||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~--~l~~~~----------------------------~~~i~~qil~aL~yLH~~gIiH 127 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG--YFDEEM----------------------------AVKYISEVALALDYLHRHGIIH 127 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCEEe
Confidence 9999999999999999886532 222221 2478899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKC 269 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~ 269 (517)
|||||+||||+.++.+||+|||+++..
T Consensus 128 rDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 128 RDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred CCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 999999999999999999999999754
No 128
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4e-47 Score=348.22 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=212.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
-|.++.+||+|+||.||+|.++. ++..+|||.+..+ ..++.+..|+.||.+++.|+||++|+.|.....+
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~E-----sG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDL 103 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRE-----SGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDL 103 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhc-----cCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCce
Confidence 37788999999999999999987 7899999999765 4456677799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+|||||..|++.+.++.+. +.+.+.+.. .+++..++||+|||...-||||
T Consensus 104 WIVMEYCGAGSiSDI~R~R~-K~L~E~EIs----------------------------~iL~~TLKGL~YLH~~~KIHRD 154 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARR-KPLSEQEIS----------------------------AVLRDTLKGLQYLHDLKKIHRD 154 (502)
T ss_pred EeehhhcCCCcHHHHHHHhc-CCccHHHHH----------------------------HHHHHHHhHHHHHHHHHHHHhh
Confidence 99999999999999887643 444444443 4568999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
||..|||++.+|+.||+|||.|-.+..
T Consensus 155 IKAGNILLNT~G~AKLADFGVAGQLTD----------------------------------------------------- 181 (502)
T KOG0574|consen 155 IKAGNILLNTDGIAKLADFGVAGQLTD----------------------------------------------------- 181 (502)
T ss_pred cccccEEEcccchhhhhhccccchhhh-----------------------------------------------------
Confidence 999999999999999999999832211
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.-.+.++++|||.|||||++....|+.++||||||++..||..|++||.+..+..
T Consensus 182 -------------------------TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR 236 (502)
T KOG0574|consen 182 -------------------------TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR 236 (502)
T ss_pred -------------------------hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc
Confidence 0123467799999999999999999999999999999999999999999877665
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
.+..|-..+ +.....++.| +.++.|||+.||.++|++|-|+. ++++|||+++..
T Consensus 237 AIFMIPT~P----PPTF~KPE~W--S~~F~DFi~~CLiK~PE~R~TA~----~L~~H~FiknA~ 290 (502)
T KOG0574|consen 237 AIFMIPTKP----PPTFKKPEEW--SSEFNDFIRSCLIKKPEERKTAL----RLCEHTFIKNAP 290 (502)
T ss_pred eeEeccCCC----CCCCCChHhh--hhHHHHHHHHHhcCCHHHHHHHH----HHhhhhhhcCCC
Confidence 544443332 2222222332 23589999999999999999998 999999998643
No 129
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.3e-44 Score=359.28 Aligned_cols=267 Identities=25% Similarity=0.315 Sum_probs=187.5
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--CceeEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--SHYSCL 166 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~l 166 (517)
.++||+|+||+||+|+++.. ..++.||+|.+..... .....+|+.+|++++||||++++++|.. +..+|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~---~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDG---KDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccC---CCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEE
Confidence 46899999999999997642 2457899999875421 2234569999999999999999999853 567899
Q ss_pred EEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCC
Q 010140 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLK 246 (517)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 246 (517)
||||+ +++|..++.......... .........++.++.||+.||+|||++||+|||||
T Consensus 78 v~e~~-~~~l~~~~~~~~~~~~~~---------------------~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlk 135 (317)
T cd07868 78 LFDYA-EHDLWHIIKFHRASKANK---------------------KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK 135 (317)
T ss_pred EEecc-CCCHHHHHHhcccccccC---------------------CcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence 99999 568888776432111000 00011223346789999999999999999999999
Q ss_pred CCceEE----ccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 247 PENVLV----REDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 247 p~NILl----~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|+|||+ +.++.+||+|||+++.......
T Consensus 136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------ 167 (317)
T cd07868 136 PANILVMGEGPERGRVKIADMGFARLFNSPLK------------------------------------------------ 167 (317)
T ss_pred HHHEEEecCCCCcCcEEEeecCceeccCCCCc------------------------------------------------
Confidence 999999 4567899999999854321000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
........+||+.|+|||++.+. .++.++||||+||++|+|++|++||.+..
T Consensus 168 ---------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 168 ---------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ---------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 00112245789999999999875 48999999999999999999999997543
Q ss_pred h---------HHHHHHHhcCCCC-----------CCCC-------------CCCCchh-----HHhhhhHHHHHHHhccC
Q 010140 402 N---------EKTLINILKKPLT-----------FPRI-------------GVSSSKE-----FEEVVKLQDLISKLLVK 443 (517)
Q Consensus 402 ~---------~~~~~~i~~~~~~-----------~p~~-------------~~~~~~~-----~~~~~~l~dLi~~~L~~ 443 (517)
. ...+..+...... .+.. ....... ......+.+||.+||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 300 (317)
T cd07868 221 EDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM 300 (317)
T ss_pred ccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhcc
Confidence 2 1222222111000 0000 0000000 00112478999999999
Q ss_pred CcccccCCCCChHHhhcCCCc
Q 010140 444 NPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 444 dP~~R~t~~~~~~ell~hp~f 464 (517)
||.+|||++ |+|+||||
T Consensus 301 dP~~R~t~~----e~l~hp~f 317 (317)
T cd07868 301 DPIKRITSE----QAMQDPYF 317 (317)
T ss_pred CcccCCCHH----HHhcCCCC
Confidence 999999998 99999998
No 130
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.3e-44 Score=388.38 Aligned_cols=270 Identities=27% Similarity=0.433 Sum_probs=208.0
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
.+...+++|++++.||+|+||+||+|++.. ++..||+|++...... ......+..|+.+|+.|+|||||+++++
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~-----tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~ 80 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKR-----TQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDR 80 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECC-----CCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEE
Confidence 355667899999999999999999999986 6789999998754322 2334567779999999999999999998
Q ss_pred eec--CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 158 FEA--SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 158 ~~~--~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
|.. ...+|||||||++|+|.++|.........+. ...++.|+.||+.||+||
T Consensus 81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~--------------------------E~~Il~Ia~QIL~ALaYL 134 (1021)
T PTZ00266 81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIE--------------------------EHAIVDITRQLLHALAYC 134 (1021)
T ss_pred EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCC--------------------------HHHHHHHHHHHHHHHHHH
Confidence 854 4679999999999999998875321111111 122347889999999999
Q ss_pred Hhc-------CceeccCCCCceEEcc-----------------CCcEEeccCCCcccccccccccCCcchHHHHhhhccc
Q 010140 236 HMM-------GIVYRDLKPENVLVRE-----------------DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKC 291 (517)
Q Consensus 236 H~~-------~iiHrDLKp~NILl~~-----------------~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (517)
|+. +||||||||+||||+. .+.+||+|||+++.+..
T Consensus 135 Hs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~-------------------- 194 (1021)
T PTZ00266 135 HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI-------------------- 194 (1021)
T ss_pred HhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccc--------------------
Confidence 984 4999999999999964 33589999999843211
Q ss_pred CCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC
Q 010140 292 SIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG 371 (517)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~ 371 (517)
.......+||+.|+|||++.+
T Consensus 195 -----------------------------------------------------------~s~~~s~vGTp~YmAPEvL~g 215 (1021)
T PTZ00266 195 -----------------------------------------------------------ESMAHSCVGTPYYWSPELLLH 215 (1021)
T ss_pred -----------------------------------------------------------cccccccCCCccccCHHHHhc
Confidence 001123469999999999965
Q ss_pred C--CCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCccccc
Q 010140 372 Q--GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449 (517)
Q Consensus 372 ~--~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~ 449 (517)
. .++.++||||||||||||++|..||........+...+......+... .+.++.+||..||..+|.+||
T Consensus 216 e~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~--------~S~eL~dLI~~~L~~dPeeRP 287 (1021)
T PTZ00266 216 ETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKG--------KSKELNILIKNLLNLSAKERP 287 (1021)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCC--------CCHHHHHHHHHHhcCChhHCc
Confidence 3 488999999999999999999999987766555555444433332211 122589999999999999999
Q ss_pred CCCCChHHhhcCCCcCCCCcc
Q 010140 450 GSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 450 t~~~~~~ell~hp~f~~~~~~ 470 (517)
++. |+|.||||+.+...
T Consensus 288 Sa~----QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 288 SAL----QCLGYQIIKNVGPP 304 (1021)
T ss_pred CHH----HHhccHHHhhcCCC
Confidence 998 99999999876543
No 131
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-43 Score=343.38 Aligned_cols=258 Identities=37% Similarity=0.687 Sum_probs=206.3
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHH-HhcCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL-TMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il-~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||.|+||.||+|.+.. .++.||+|++.+...........+..|..++ ...+||||+++++++..++..|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS-----TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecC-----CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence 579999999999999876 5688999999765443333334444555544 4458999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||++|++|..++.... .++.... ..++.||+.||.|||+.||+||||+|+
T Consensus 77 e~~~~~~L~~~l~~~~--~~~~~~~----------------------------~~i~~qi~~aL~~lH~~~i~H~dl~p~ 126 (260)
T cd05611 77 EYLNGGDCASLIKTLG--GLPEDWA----------------------------KQYIAEVVLGVEDLHQRGIIHRDIKPE 126 (260)
T ss_pred eccCCCCHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 9999999999886542 2222222 367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
||+++.++.++|+|||+++....
T Consensus 127 nil~~~~~~~~l~dfg~~~~~~~--------------------------------------------------------- 149 (260)
T cd05611 127 NLLIDQTGHLKLTDFGLSRNGLE--------------------------------------------------------- 149 (260)
T ss_pred HeEECCCCcEEEeecccceeccc---------------------------------------------------------
Confidence 99999999999999998732110
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~ 408 (517)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......
T Consensus 150 -------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 204 (260)
T cd05611 150 -------------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDN 204 (260)
T ss_pred -------------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 1123588899999999988889999999999999999999999998888777777
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcc
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
+......++..... ....++.++|.+||+.||++||++ ..++|++.||||+.++|+
T Consensus 205 ~~~~~~~~~~~~~~-----~~~~~~~~~i~~~l~~~p~~R~~~-~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 205 ILSRRINWPEEVKE-----FCSPEAVDLINRLLCMDPAKRLGA-NGYQEIKSHPFFKSINWD 260 (260)
T ss_pred HHhcccCCCCcccc-----cCCHHHHHHHHHHccCCHHHccCC-CcHHHHHcChHhhcCCCC
Confidence 66555443332221 122358999999999999999988 456699999999999995
No 132
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.7e-44 Score=362.82 Aligned_cols=262 Identities=27% Similarity=0.367 Sum_probs=200.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
.++|++++.||+|+||.||+|.+.. +++.||||++...... ......+.+|+.+|+.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTR-----LRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECC-----CCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence 3689999999999999999999876 6788999999765322 23345566799999999999999999988543
Q ss_pred -----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
...|++||++ +++|..++.. ..++... ++.++.||+.||+|||
T Consensus 88 ~~~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~----------------------------~~~i~~qi~~aL~~LH 135 (343)
T cd07878 88 SIENFNEVYLVTNLM-GADLNNIVKC---QKLSDEH----------------------------VQFLIYQLLRGLKYIH 135 (343)
T ss_pred cccccCcEEEEeecC-CCCHHHHHhc---CCCCHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 4579999998 8899887653 2233322 2467899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.++.+||+|||+++....
T Consensus 136 ~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~--------------------------------------------- 170 (343)
T cd07878 136 SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD--------------------------------------------- 170 (343)
T ss_pred HCCeecccCChhhEEECCCCCEEEcCCccceecCC---------------------------------------------
Confidence 99999999999999999999999999999843210
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~ 395 (517)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 171 ------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~ 214 (343)
T cd07878 171 ------------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKA 214 (343)
T ss_pred ------------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCC
Confidence 1123468999999999987 458999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCC-----------------CCCCchhH-----HhhhhHHHHHHHhccCCcccccCCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPRI-----------------GVSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~-----------------~~~~~~~~-----~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
||.+.+..+.+..+.......+.. .......+ .....+.+||.+||+.||.+|||+.
T Consensus 215 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~- 293 (343)
T cd07878 215 LFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS- 293 (343)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH-
Confidence 998876655554443211100000 00000000 0122478999999999999999998
Q ss_pred ChHHhhcCCCcCCC
Q 010140 454 GSVEIKRHEFFKGI 467 (517)
Q Consensus 454 ~~~ell~hp~f~~~ 467 (517)
|+++||||...
T Consensus 294 ---ell~hp~~~~~ 304 (343)
T cd07878 294 ---EALAHPYFSQY 304 (343)
T ss_pred ---HHhcCcchhcc
Confidence 99999999864
No 133
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.6e-44 Score=348.98 Aligned_cols=267 Identities=33% Similarity=0.657 Sum_probs=196.0
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHH---HHhcCCCCccceeeeeecCceeEEE
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI---LTMLDHPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~i---l~~l~HpnIv~l~~~~~~~~~~~lV 167 (517)
.||+|+||.||+|.+.. +++.||+|++.+..............|..+ +...+||||+.+++++..++..|+|
T Consensus 1 ~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECC-----CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence 48999999999999876 678999999876533222222222334433 3345799999999999999999999
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCC
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKP 247 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp 247 (517)
|||++||+|..++.... .+++.. ++.++.||+.||+|||++||+||||||
T Consensus 76 ~e~~~~~~L~~~i~~~~--~l~~~~----------------------------~~~i~~qi~~al~~lH~~~ivH~dikp 125 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG--VFSEKE----------------------------MRFYATEIILGLEHMHNRFVVYRDLKP 125 (279)
T ss_pred EecCCCCCHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCcCCCCCCH
Confidence 99999999998876542 233222 236789999999999999999999999
Q ss_pred CceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccc
Q 010140 248 ENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIR 327 (517)
Q Consensus 248 ~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (517)
+|||++.++.++|+|||++.....
T Consensus 126 ~Nil~~~~~~~~l~dfg~~~~~~~-------------------------------------------------------- 149 (279)
T cd05633 126 ANILLDEHGHVRISDLGLACDFSK-------------------------------------------------------- 149 (279)
T ss_pred HHEEECCCCCEEEccCCcceeccc--------------------------------------------------------
Confidence 999999999999999998732210
Q ss_pred cccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCCCCCh--HH
Q 010140 328 EQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENN--EK 404 (517)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~~~~--~~ 404 (517)
.......||+.|+|||.+.+ ..++.++||||+||++|+|++|..||..... ..
T Consensus 150 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~ 205 (279)
T cd05633 150 ------------------------KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 205 (279)
T ss_pred ------------------------cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH
Confidence 00112358999999999874 5589999999999999999999999975432 12
Q ss_pred HHHHH-hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc--CCCCCCC
Q 010140 405 TLINI-LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEV 480 (517)
Q Consensus 405 ~~~~i-~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~--~~~p~~~ 480 (517)
..... .......+.. ...++.++|.+||..||.+|++.. ..++|+++||||++++|.... ...+|.+
T Consensus 206 ~~~~~~~~~~~~~~~~---------~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 276 (279)
T cd05633 206 EIDRMTLTVNVELPDS---------FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLI 276 (279)
T ss_pred HHHHHhhcCCcCCccc---------cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcCCCCCCCC
Confidence 22221 1111122111 123589999999999999999621 234599999999999998663 3344433
Q ss_pred C
Q 010140 481 P 481 (517)
Q Consensus 481 ~ 481 (517)
|
T Consensus 277 ~ 277 (279)
T cd05633 277 P 277 (279)
T ss_pred C
Confidence 3
No 134
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.6e-44 Score=352.51 Aligned_cols=267 Identities=27% Similarity=0.377 Sum_probs=202.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+++. +++.||+|.+...... .....+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~ 77 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKL-----TDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK 77 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcC-----CCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecCC
Confidence 5789999999999999999999876 6788999998644211 22234556999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||++ ++|..++.... ..+... .++.++.||+.||+|||++||+|
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~----------------------------~~~~~~~qi~~aL~~lH~~~i~H 127 (301)
T cd07873 78 SLTLVFEYLD-KDLKQYLDDCG-NSINMH----------------------------NVKLFLFQLLRGLNYCHRRKVLH 127 (301)
T ss_pred eEEEEEeccc-cCHHHHHHhcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHhCCeeC
Confidence 9999999996 68988876532 122222 22467899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||++......
T Consensus 128 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-------------------------------------------------- 157 (301)
T cd07873 128 RDLKPQNLLINERGELKLADFGLARAKSIP-------------------------------------------------- 157 (301)
T ss_pred CCCCHHHEEECCCCcEEECcCcchhccCCC--------------------------------------------------
Confidence 999999999999999999999997322100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+
T Consensus 158 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 158 ----------------------------TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred ----------------------------CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0001123578899999998764 47889999999999999999999999887
Q ss_pred hHHHHHHHhcCCCC-------------------CCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPLT-------------------FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~~-------------------~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
..+....+...... .+......... .....++++||.+||+.||.+|||+. |+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~----eil~ 285 (301)
T cd07873 210 VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE----EAMK 285 (301)
T ss_pred HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH----HHhc
Confidence 66555444321110 01100000000 01233588999999999999999998 9999
Q ss_pred CCCcCCCC
Q 010140 461 HEFFKGIN 468 (517)
Q Consensus 461 hp~f~~~~ 468 (517)
||||+...
T Consensus 286 h~~f~~~~ 293 (301)
T cd07873 286 HPYFHCLG 293 (301)
T ss_pred Cccccccc
Confidence 99998765
No 135
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.3e-43 Score=342.05 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=206.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH--HHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
++|.+.+.||+|++|.||+|.+.. +++.||+|.+..... ........+.+|+.++++++||||+++++++..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~-----~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVD-----TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcC-----CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence 579999999999999999999876 678899999864322 2223456678899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||++|++|.+++.... .++.. ..+.++.||+.||.|||+.||+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~----------------------------~~~~~~~~l~~~l~~lH~~~i~ 126 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG--ALTET----------------------------VTRKYTRQILEGVEYLHSNMIV 126 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC--CCCHH----------------------------HHHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999887542 12221 1236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.++|+|||+++.......
T Consensus 127 H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 159 (263)
T cd06625 127 HRDIKGANILRDSAGNVKLGDFGASKRLQTICS----------------------------------------------- 159 (263)
T ss_pred cCCCCHHHEEEcCCCCEEEeecccceecccccc-----------------------------------------------
Confidence 999999999999999999999999843221000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||...+
T Consensus 160 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 211 (263)
T cd06625 160 ----------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE 211 (263)
T ss_pred ----------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc
Confidence 0000123457889999999999889999999999999999999999998876
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.......+........ .... ....+.+||.+||..+|.+||++. ++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~------~~~~~~~li~~~l~~~p~~Rpt~~----~ll~~~~~ 263 (263)
T cd06625 212 AMAAIFKIATQPTNPQ-LPSH------VSPDARNFLRRTFVENAKKRPSAE----ELLRHFFV 263 (263)
T ss_pred hHHHHHHHhccCCCCC-CCcc------CCHHHHHHHHHHhhcCcccCCCHH----HHhhCCCC
Confidence 6665555544332211 1111 122489999999999999999998 99999998
No 136
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-43 Score=356.05 Aligned_cols=272 Identities=22% Similarity=0.314 Sum_probs=201.0
Q ss_pred EEeeeecc--ceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 88 LLRRLGSG--DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 88 i~~~LG~G--~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
++++||+| +||+||+++.+. +++.||+|.+..+... ......+.+|+.+++.++||||++++++|..++..|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKP-----TGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecc-----cCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEE
Confidence 56789999 789999999987 7889999999765332 233456677999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+||||+++|+|.+++.......++... ++.++.||+.||+|||++||+||||
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~l~~~~----------------------------~~~i~~qi~~~L~~LH~~~iiH~dl 127 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMDGMSELA----------------------------IAYILQGVLKALDYIHHMGYVHRSV 127 (327)
T ss_pred EEEeccCCCcHHHHHHhhccCCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEecCCC
Confidence 999999999999998664333333222 2367899999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
||+|||++.++.++++||+.+.........
T Consensus 128 kp~Nil~~~~~~~~l~~~~~~~~~~~~~~~-------------------------------------------------- 157 (327)
T cd08227 128 KASHILISVDGKVYLSGLRSNLSMINHGQR-------------------------------------------------- 157 (327)
T ss_pred ChhhEEEecCCcEEEcccchhhcccccccc--------------------------------------------------
Confidence 999999999999999999865221100000
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC--CCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~--~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
............++..|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 158 ---------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 216 (327)
T cd08227 158 ---------------------LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 216 (327)
T ss_pred ---------------------ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0000000112357788999999976 35899999999999999999999999876654
Q ss_pred HHHHHHhcCCCCCCC-----------------------------------CCCC--CchhHHhhhhHHHHHHHhccCCcc
Q 010140 404 KTLINILKKPLTFPR-----------------------------------IGVS--SSKEFEEVVKLQDLISKLLVKNPK 446 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~-----------------------------------~~~~--~~~~~~~~~~l~dLi~~~L~~dP~ 446 (517)
............... .... ..........+.+||.+||+.||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 296 (327)
T cd08227 217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD 296 (327)
T ss_pred HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence 444333322111000 0000 000001234688999999999999
Q ss_pred cccCCCCChHHhhcCCCcCCCC
Q 010140 447 KRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 447 ~R~t~~~~~~ell~hp~f~~~~ 468 (517)
+|||+. |+++||||+.+.
T Consensus 297 ~Rpt~~----ell~~p~f~~~~ 314 (327)
T cd08227 297 ARPSAS----TLLNHSFFKQIK 314 (327)
T ss_pred hcCCHH----HHhcChhhhhcc
Confidence 999998 999999998754
No 137
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-43 Score=366.44 Aligned_cols=260 Identities=24% Similarity=0.321 Sum_probs=195.3
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|.+.+.||+|+||.||+|.+.. .++.||||.... ..+.+|+.+|++++|||||++++++..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~-----~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~ 233 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPD-----YPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGG 233 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECC-----CCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECC
Confidence 4579999999999999999999886 578899996432 22345999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|||||++ .++|..++.... ..+... .++.|+.||+.||.|||++||||
T Consensus 234 ~~~lv~e~~-~~~L~~~l~~~~-~~l~~~----------------------------~~~~i~~qi~~aL~yLH~~gIvH 283 (461)
T PHA03211 234 LTCLVLPKY-RSDLYTYLGARL-RPLGLA----------------------------QVTAVARQLLSAIDYIHGEGIIH 283 (461)
T ss_pred EEEEEEEcc-CCCHHHHHHhcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCEEE
Confidence 999999999 578988876532 122222 22468899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||||+.++.+||+|||+++.......
T Consensus 284 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~------------------------------------------------ 315 (461)
T PHA03211 284 RDIKTENVLVNGPEDICLGDFGAACFARGSWS------------------------------------------------ 315 (461)
T ss_pred CcCCHHHEEECCCCCEEEcccCCceecccccc------------------------------------------------
Confidence 99999999999999999999999843221000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC-
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN- 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~- 401 (517)
.......+||+.|+|||++.+..++.++|||||||+||||++|..|+....
T Consensus 316 ----------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~ 367 (461)
T PHA03211 316 ----------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASR 367 (461)
T ss_pred ----------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCc
Confidence 001123469999999999999999999999999999999999876654321
Q ss_pred -------hHHHHHHHhcCCC---CCCCCCC----------------------CCchhHHhhhhHHHHHHHhccCCccccc
Q 010140 402 -------NEKTLINILKKPL---TFPRIGV----------------------SSSKEFEEVVKLQDLISKLLVKNPKKRI 449 (517)
Q Consensus 402 -------~~~~~~~i~~~~~---~~p~~~~----------------------~~~~~~~~~~~l~dLi~~~L~~dP~~R~ 449 (517)
...+...+..... .++.... .+........++.+||.+||+.||.+||
T Consensus 368 ~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RP 447 (461)
T PHA03211 368 GDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRP 447 (461)
T ss_pred ccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCc
Confidence 1222222222111 1111000 0000011223688999999999999999
Q ss_pred CCCCChHHhhcCCCcCC
Q 010140 450 GSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 450 t~~~~~~ell~hp~f~~ 466 (517)
|+. |+|+||||++
T Consensus 448 sa~----elL~hp~f~~ 460 (461)
T PHA03211 448 SAA----ELLRLPLFQS 460 (461)
T ss_pred CHH----HHhhCcccCC
Confidence 998 9999999975
No 138
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2e-43 Score=348.23 Aligned_cols=267 Identities=28% Similarity=0.425 Sum_probs=210.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...+.|+++++||.|+||.||+|++.. +++.||+|++.... ......+.+|+.+++.++||||+++++.+..
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~-----~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKE-----TGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYW 80 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECC-----CCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe
Confidence 344679999999999999999999876 67889999987543 2335566779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
++..|+||||++|++|..++.... ..+.... ++.++.||+.||+|||++||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~----------------------------~~~~~~ql~~~l~~lH~~~i 131 (292)
T cd06644 81 DGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQ----------------------------IQVICRQMLEALQYLHSMKI 131 (292)
T ss_pred CCeEEEEEecCCCCcHHHHHHhhc-CCCCHHH----------------------------HHHHHHHHHHHHHHHhcCCe
Confidence 999999999999999988765432 2222222 23678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.+||+|||++......
T Consensus 132 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 163 (292)
T cd06644 132 IHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT------------------------------------------------ 163 (292)
T ss_pred eecCCCcceEEEcCCCCEEEccCccceecccc------------------------------------------------
Confidence 99999999999999999999999987321100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~ 395 (517)
........|++.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 164 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~ 213 (292)
T cd06644 164 ------------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 213 (292)
T ss_pred ------------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCC
Confidence 001123358889999999853 346889999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~ 472 (517)
||...+....+.++............ ....++.+||.+||..||++||++. ++++||||..++|...
T Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~~~~ 280 (292)
T cd06644 214 PHHELNPMRVLLKIAKSEPPTLSQPS------KWSMEFRDFLKTALDKHPETRPSAA----QLLEHPFVSSVTSNRP 280 (292)
T ss_pred CCccccHHHHHHHHhcCCCccCCCCc------ccCHHHHHHHHHHhcCCcccCcCHH----HHhcCccccccccchh
Confidence 99887766666555543221111111 1122589999999999999999998 9999999999998764
No 139
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.5e-44 Score=345.56 Aligned_cols=256 Identities=38% Similarity=0.630 Sum_probs=201.7
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
|++++.||+|+||+||+|++.. .++.||+|++......... .....+|+.+++.++||||+++++++......|
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKK-----NGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETT-----TTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECC-----CCeEEEEEEeccccccccc-cchhhhhhhcccccccccccccccccccccccc
Confidence 7899999999999999999987 6788999999876544332 223345999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+||||+++++|.+++... ..+... .+..++.||+.||++||++||+||||
T Consensus 75 ~v~~~~~~~~L~~~l~~~--~~~~~~----------------------------~~~~~~~qi~~~L~~Lh~~~i~H~di 124 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKN--KPLSEE----------------------------EILKIAYQILEALAYLHSKGIVHRDI 124 (260)
T ss_dssp EEEEEETTEBHHHHHHHH--SSBBHH----------------------------HHHHHHHHHHHHHHHHHHTTEEESSB
T ss_pred cccccccccccccccccc--cccccc----------------------------cccccccccccccccccccccccccc
Confidence 999999999999998732 222222 22367899999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
||+||+++.++.++|+|||.+.....
T Consensus 125 kp~NIl~~~~~~~~l~Dfg~~~~~~~------------------------------------------------------ 150 (260)
T PF00069_consen 125 KPENILLDENGEVKLIDFGSSVKLSE------------------------------------------------------ 150 (260)
T ss_dssp SGGGEEESTTSEEEESSGTTTEESTS------------------------------------------------------
T ss_pred cccccccccccccccccccccccccc------------------------------------------------------
Confidence 99999999999999999999843200
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc-CCCCCccchHHHHHHHHHHHhhCCCCCCCCC---
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN--- 401 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~-~~~~~~~~DiWSlGvil~elltG~~Pf~~~~--- 401 (517)
.........+++.|+|||++. +..++.++||||||+++|+|++|..||....
T Consensus 151 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~ 206 (260)
T PF00069_consen 151 ------------------------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD 206 (260)
T ss_dssp ------------------------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 011123446899999999998 7778999999999999999999999999873
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+.+.............. .....+.+||.+||+.||++||++. ++++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~R~~~~----~l~~~~~~ 260 (260)
T PF00069_consen 207 QLEIIEKILKRPLPSSSQQSR-----EKSEELRDLIKKMLSKDPEQRPSAE----ELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHTHHHHHTTSHT-----TSHHHHHHHHHHHSSSSGGGSTTHH----HHHTSGGG
T ss_pred hhhhhhhcccccccccccccc-----hhHHHHHHHHHHHccCChhHCcCHH----HHhcCCCC
Confidence 233333333221111110000 0113599999999999999999998 99999998
No 140
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-43 Score=374.68 Aligned_cols=284 Identities=22% Similarity=0.316 Sum_probs=198.0
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCC----------CCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCc
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGL----------PQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~----------~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI 151 (517)
..++|+++++||+|+||+||+|..+...... .+...+.+++.+...........+.+|+.+|++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999999876421100 001111111211111122334567789999999999999
Q ss_pred cceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHH
Q 010140 152 PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLA 231 (517)
Q Consensus 152 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 231 (517)
|++++++...+..|+|||++ +++|..++........ .......++.|+.||+.|
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~-------------------------~~~~~~~~~~i~~ql~~a 279 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWK-------------------------DRPLLKQTRAIMKQLLCA 279 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhcccccc-------------------------ccccHHHHHHHHHHHHHH
Confidence 99999999999999999999 5688777654321100 011123345789999999
Q ss_pred HHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccc
Q 010140 232 LEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVS 311 (517)
Q Consensus 232 L~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (517)
|+|||++|||||||||+|||++.++.+||+|||+++.+....
T Consensus 280 L~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~-------------------------------------- 321 (501)
T PHA03210 280 VEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKER-------------------------------------- 321 (501)
T ss_pred HHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCccc--------------------------------------
Confidence 999999999999999999999999999999999985432100
Q ss_pred cccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHh
Q 010140 312 HGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEML 391 (517)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ell 391 (517)
.......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 322 ---------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 362 (501)
T PHA03210 322 ---------------------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML 362 (501)
T ss_pred ---------------------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 00112357999999999999999999999999999999999
Q ss_pred hCCCC-CCCC--ChHHHHHHHhcCC----CCCCCCC----------------CCC---chhHHhhhhHHHHHHHhccCCc
Q 010140 392 YGTTP-FKGE--NNEKTLINILKKP----LTFPRIG----------------VSS---SKEFEEVVKLQDLISKLLVKNP 445 (517)
Q Consensus 392 tG~~P-f~~~--~~~~~~~~i~~~~----~~~p~~~----------------~~~---~~~~~~~~~l~dLi~~~L~~dP 445 (517)
+|..+ |... .....+.+++... ..+|... ... ........++.++|.+||++||
T Consensus 363 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP 442 (501)
T PHA03210 363 SHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDW 442 (501)
T ss_pred HCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCc
Confidence 98764 4322 2223333332211 1111100 000 0001122357889999999999
Q ss_pred ccccCCCCChHHhhcCCCcCCCCcccc
Q 010140 446 KKRIGSLKGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 446 ~~R~t~~~~~~ell~hp~f~~~~~~~~ 472 (517)
.+||++. |+|.||||...++..+
T Consensus 443 ~~Rpsa~----elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 443 HLRPGAA----ELLALPLFSAEEEEEI 465 (501)
T ss_pred ccCcCHH----HHhhChhhhcCCchHH
Confidence 9999998 9999999998876654
No 141
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=362.68 Aligned_cols=253 Identities=28% Similarity=0.371 Sum_probs=212.7
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
-|.-++.||.|+||.||.|++.. +...||||.+.-.......++..+..|+..|+++.|||+|.+-++|-.+...
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~-----n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVR-----NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccC-----ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchH
Confidence 47778899999999999999987 7789999999766555667888999999999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
||||||| -|+-.+++.-+. +++.+.++ .-|+.+.+.||+|||+.+.||||
T Consensus 102 WLVMEYC-lGSAsDlleVhk-KplqEvEI----------------------------AAi~~gaL~gLaYLHS~~~IHRD 151 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHK-KPLQEVEI----------------------------AAITHGALQGLAYLHSHNRIHRD 151 (948)
T ss_pred HHHHHHH-hccHHHHHHHHh-ccchHHHH----------------------------HHHHHHHHHHHHHHHHhhHHhhh
Confidence 9999999 567777776543 23333332 35678999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
||..|||+++.|.|||+|||.|....
T Consensus 152 iKAGNILLse~g~VKLaDFGSAsi~~------------------------------------------------------ 177 (948)
T KOG0577|consen 152 IKAGNILLSEPGLVKLADFGSASIMA------------------------------------------------------ 177 (948)
T ss_pred ccccceEecCCCeeeeccccchhhcC------------------------------------------------------
Confidence 99999999999999999999873221
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC---CCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~---~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
...+|+|||+|||||++.. ..|+-++||||||+++.||.-.++|+...+
T Consensus 178 ----------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN 229 (948)
T KOG0577|consen 178 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 229 (948)
T ss_pred ----------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch
Confidence 2357899999999999863 459999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
....+..|.....+... ..+|. ..++.|+..||++-|.+|||++ ++|+|+|..
T Consensus 230 AMSALYHIAQNesPtLq-----s~eWS--~~F~~Fvd~CLqKipqeRptse----~ll~H~fv~ 282 (948)
T KOG0577|consen 230 AMSALYHIAQNESPTLQ-----SNEWS--DYFRNFVDSCLQKIPQERPTSE----ELLKHRFVL 282 (948)
T ss_pred HHHHHHHHHhcCCCCCC-----CchhH--HHHHHHHHHHHhhCcccCCcHH----HHhhcchhc
Confidence 98888888776433222 12222 2489999999999999999998 999999975
No 142
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.8e-43 Score=339.36 Aligned_cols=256 Identities=27% Similarity=0.441 Sum_probs=205.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec-Cce
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-SHY 163 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~ 163 (517)
+|++++.||+|++|.||+++++. .++.||+|.+...... ......+..|+.++++++||||+++++.+.. +..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRT-----DGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcC-----CCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCE
Confidence 58999999999999999999876 5678999998754322 2334556779999999999999999998864 456
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+||||+++++|.+++.......++..+. ..++.||+.||+|||++||+||
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~----------------------------~~~~~~l~~~l~~lH~~~i~H~ 126 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQV----------------------------VEWFVQIAMALQYLHEKHILHR 126 (257)
T ss_pred EEEEecccCCCcHHHHHHHhcCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCeecc
Confidence 899999999999999887643333333332 3678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||++.......
T Consensus 127 di~p~nil~~~~~~~~l~df~~~~~~~~~~-------------------------------------------------- 156 (257)
T cd08223 127 DLKTQNVFLTRTNIIKVGDLGIARVLENQC-------------------------------------------------- 156 (257)
T ss_pred CCCchhEEEecCCcEEEecccceEEecccC--------------------------------------------------
Confidence 999999999999999999999974321100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 208 (257)
T cd08223 157 ----------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN 208 (257)
T ss_pred ----------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence 0112345889999999999988999999999999999999999999987776
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.....+..+.... .... ....+.+||.+||+.||++||++. ++++||||
T Consensus 209 ~~~~~~~~~~~~~--~~~~------~~~~~~~li~~~l~~~p~~Rp~~~----~~l~~~~~ 257 (257)
T cd08223 209 SLVYRIIEGKLPP--MPKD------YSPELGELIATMLSKRPEKRPSVK----SILRQPYI 257 (257)
T ss_pred HHHHHHHhcCCCC--Cccc------cCHHHHHHHHHHhccCcccCCCHH----HHhcCCCC
Confidence 6666665543321 1111 223589999999999999999998 99999997
No 143
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.1e-43 Score=349.67 Aligned_cols=262 Identities=27% Similarity=0.350 Sum_probs=202.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||++++.. ++..+|+|.+..+.. .....++.+|+.++++++||||+++++++..++.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRP-----SGLIMARKLIHLEIK--PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGE 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcC-----CCeEEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCE
Confidence 479999999999999999999876 567899999864421 2334567779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-cCcee
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-MGIVY 242 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~~iiH 242 (517)
+|+||||++|++|.+++... ..++... ++.++.||+.||.|||+ .+++|
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~--~~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~~i~H 123 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKA--GRIPENI----------------------------LGKISIAVLRGLTYLREKHKIMH 123 (308)
T ss_pred EEEEeeccCCCcHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhhCCEEE
Confidence 99999999999999998764 2222222 23678999999999998 59999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||++.....
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~--------------------------------------------------- 152 (308)
T cd06615 124 RDVKPSNILVNSRGEIKLCDFGVSGQLID--------------------------------------------------- 152 (308)
T ss_pred CCCChHHEEEecCCcEEEccCCCcccccc---------------------------------------------------
Confidence 99999999999999999999998732110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
......+|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.
T Consensus 153 -----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~ 203 (308)
T cd06615 153 -----------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA 203 (308)
T ss_pred -----------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch
Confidence 011234689999999999888899999999999999999999999986654
Q ss_pred HHHHHHHhcCCCCCCCCC-----------------------------CCCchhHHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 403 EKTLINILKKPLTFPRIG-----------------------------VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~-----------------------------~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
......+.......+... .+.........++.+||.+||..||++||++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~- 282 (308)
T cd06615 204 KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLK- 282 (308)
T ss_pred hhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHH-
Confidence 333222211110000000 00000001223589999999999999999998
Q ss_pred ChHHhhcCCCcCC
Q 010140 454 GSVEIKRHEFFKG 466 (517)
Q Consensus 454 ~~~ell~hp~f~~ 466 (517)
|+++||||..
T Consensus 283 ---~ll~~~~~~~ 292 (308)
T cd06615 283 ---ELTKHPFIKR 292 (308)
T ss_pred ---HHhcChhhhh
Confidence 9999999975
No 144
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-45 Score=360.43 Aligned_cols=250 Identities=28% Similarity=0.413 Sum_probs=204.8
Q ss_pred HhhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccce
Q 010140 75 RRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTL 154 (517)
Q Consensus 75 ~~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l 154 (517)
....|++..+...-++-||+|+.|.||+|+.++ +.||||.++.-.. .+++-|++|+|||||.+
T Consensus 115 q~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~n-------etVAVKKV~elkE----------TdIKHLRkLkH~NII~F 177 (904)
T KOG4721|consen 115 QEELWEIPFEEISELEWLGSGAQGAVFLGRLHN-------ETVAVKKVRELKE----------TDIKHLRKLKHPNIITF 177 (904)
T ss_pred hhhhccCCHHHhhhhhhhccCcccceeeeeccC-------ceehhHHHhhhhh----------hhHHHHHhccCcceeeE
Confidence 344567777778888999999999999999875 6799998854321 27888999999999999
Q ss_pred eeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 155 YAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
.|+|.....+|||||||..|.|+..|+... .+... .+..|..+|+.|+.|
T Consensus 178 kGVCtqsPcyCIiMEfCa~GqL~~VLka~~--~itp~----------------------------llv~Wsk~IA~GM~Y 227 (904)
T KOG4721|consen 178 KGVCTQSPCYCIIMEFCAQGQLYEVLKAGR--PITPS----------------------------LLVDWSKGIAGGMNY 227 (904)
T ss_pred eeeecCCceeEEeeeccccccHHHHHhccC--ccCHH----------------------------HHHHHHHHhhhhhHH
Confidence 999999999999999999999999987642 11111 123678999999999
Q ss_pred HHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
||.+.|||||||.-||||+.+..|||+|||.++.....
T Consensus 228 LH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~------------------------------------------ 265 (904)
T KOG4721|consen 228 LHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK------------------------------------------ 265 (904)
T ss_pred HHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh------------------------------------------
Confidence 99999999999999999999999999999998543311
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~ 394 (517)
...-+|+||..|||||++...+.+.|+|||||||+|||||||+
T Consensus 266 -------------------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~E 308 (904)
T KOG4721|consen 266 -------------------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGE 308 (904)
T ss_pred -------------------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcC
Confidence 1234679999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 395 TPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
.||...+...++.-+-...+..|... .++..++=||+.||+-.|.+||++. ++|.|
T Consensus 309 iPYkdVdssAIIwGVGsNsL~LpvPs-------tcP~GfklL~Kqcw~sKpRNRPSFr----qil~H 364 (904)
T KOG4721|consen 309 IPYKDVDSSAIIWGVGSNSLHLPVPS-------TCPDGFKLLLKQCWNSKPRNRPSFR----QILLH 364 (904)
T ss_pred CCccccchheeEEeccCCcccccCcc-------cCchHHHHHHHHHHhcCCCCCccHH----HHHHH
Confidence 99998777666555544444333221 1222488899999999999999998 99998
No 145
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5e-43 Score=338.19 Aligned_cols=256 Identities=26% Similarity=0.413 Sum_probs=208.1
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|.+.+.||+|+||.||+|.++. +++.|++|.+...... ......+..|+.+++.++||||+++++++...+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKA-----DKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcC-----CCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEE
Confidence 58899999999999999999886 6788999998754322 23345677799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||++|++|.+++.......+..... ..++.||+.||.|||++||+|||
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~----------------------------~~i~~~l~~al~~lH~~~i~h~d 126 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQV----------------------------WRFFIQILLGLAHLHSKKILHRD 126 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcCCCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCcccCC
Confidence 99999999999999987653333322222 36778999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||+++.+....
T Consensus 127 l~~~nili~~~~~~~l~df~~~~~~~~~~--------------------------------------------------- 155 (256)
T cd08529 127 IKSLNLFLDAYDNVKIGDLGVAKLLSDNT--------------------------------------------------- 155 (256)
T ss_pred CCcceEEEeCCCCEEEcccccceeccCcc---------------------------------------------------
Confidence 99999999999999999999874332100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus 156 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 208 (256)
T cd08529 156 ---------------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208 (256)
T ss_pred ---------------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 01123358889999999999889999999999999999999999999888777
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+........ ... ....+.++|.+||+.+|++||++. ++++|||+
T Consensus 209 ~~~~~~~~~~~~~--~~~------~~~~~~~~i~~~l~~~p~~Rp~~~----~ll~~~~~ 256 (256)
T cd08529 209 LILKIIRGVFPPV--SQM------YSQQLAQLIDQCLTKDYRQRPDTF----QLLRNPSL 256 (256)
T ss_pred HHHHHHcCCCCCC--ccc------cCHHHHHHHHHHccCCcccCcCHH----HHhhCCCC
Confidence 7777665543221 111 122589999999999999999998 99999995
No 146
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-43 Score=341.45 Aligned_cols=256 Identities=39% Similarity=0.720 Sum_probs=207.8
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||.|+||.||+|++.. +++.||+|++.+...........+..|+.+++.++||||+++++.+.++..+|+||||+
T Consensus 1 lg~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKS-----KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECC-----CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence 7999999999999876 57889999998765444445567888999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
++++|.+++.... .++... ++.++.||+.||+|||++|++|+||||+||+
T Consensus 76 ~~~~L~~~l~~~~--~l~~~~----------------------------~~~~~~~i~~~l~~lH~~~~~h~dl~~~nil 125 (262)
T cd05572 76 LGGELWTILRDRG--LFDEYT----------------------------ARFYIACVVLAFEYLHNRGIIYRDLKPENLL 125 (262)
T ss_pred CCCcHHHHHhhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHhhCCcccCCCCHHHEE
Confidence 9999999887642 222222 2367899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.++|+|||++......
T Consensus 126 v~~~~~~~l~df~~~~~~~~~----------------------------------------------------------- 146 (262)
T cd05572 126 LDSNGYVKLVDFGFAKKLKSG----------------------------------------------------------- 146 (262)
T ss_pred EcCCCCEEEeeCCcccccCcc-----------------------------------------------------------
Confidence 999999999999997432210
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC--hHHHHHHH
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN--NEKTLINI 409 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~--~~~~~~~i 409 (517)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.... ..+.+..+
T Consensus 147 --------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 206 (262)
T cd05572 147 --------------------QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI 206 (262)
T ss_pred --------------------cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence 01122358889999999988889999999999999999999999998776 55666666
Q ss_pred hc--CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcc
Q 010140 410 LK--KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 410 ~~--~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~ 470 (517)
.. ....+|... ..++.++|.+||..||++|++.. ..++|+++||||++.+|+
T Consensus 207 ~~~~~~~~~~~~~---------~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 207 LKGNGKLEFPNYI---------DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred hccCCCCCCCccc---------CHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 63 233333222 12489999999999999999932 334699999999999995
No 147
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.1e-43 Score=345.95 Aligned_cols=262 Identities=27% Similarity=0.441 Sum_probs=208.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++++.||.|+||.||+|.+.. ++..+|+|++.... ......+..|+.+++.++||||+++++.+..+.
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKE-----TGLFAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYFYEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcC-----CCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC
Confidence 4679999999999999999999876 56889999986442 233456777999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|..++.... ..+++..+ +.++.|++.||.|||++||+|
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-~~l~~~~~----------------------------~~~~~ql~~~l~~lh~~~i~h 126 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLELE-RGLTEPQI----------------------------RYVCRQMLEALNFLHSHKVIH 126 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHhc-CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999886532 22333222 367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.++|+|||++......
T Consensus 127 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~-------------------------------------------------- 156 (280)
T cd06611 127 RDLKAGNILLTLDGDVKLADFGVSAKNKST-------------------------------------------------- 156 (280)
T ss_pred CCCChhhEEECCCCCEEEccCccchhhccc--------------------------------------------------
Confidence 999999999999999999999987322100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
........|++.|+|||++.. ..++.++|||||||++|+|++|++||
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~ 208 (280)
T cd06611 157 ----------------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPH 208 (280)
T ss_pred ----------------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCc
Confidence 001123468999999999853 34678999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
...+....+..+.............. ..++.+||.+||+.||.+||++. ++++||||.....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~li~~~l~~~p~~Rps~~----~il~~~~~~~~~~ 270 (280)
T cd06611 209 HELNPMRVLLKILKSEPPTLDQPSKW------SSSFNDFLKSCLVKDPDDRPTAA----ELLKHPFVSDQSD 270 (280)
T ss_pred ccCCHHHHHHHHhcCCCCCcCCcccC------CHHHHHHHHHHhccChhhCcCHH----HHhcChhhcccch
Confidence 98877776666665432211111111 12489999999999999999998 9999999987643
No 148
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.6e-43 Score=338.64 Aligned_cols=262 Identities=26% Similarity=0.385 Sum_probs=204.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH---HHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA---LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
+|++.+.||+|+||.||+|... +++.+|+|.+.... ........++.+|+.+++.++|+||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN------QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc------CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 5889999999999999999764 45789999886431 22234456788899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||++|++|.+++.+.. .++... +..++.||+.||+|||+.||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~----------------------------~~~~~~qi~~~l~~lH~~~i~ 124 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFG--PLPEPV----------------------------FCKYTKQILDGVAYLHNNCVV 124 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999986642 222222 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
|+||||+||+++.++.++|+|||++.........
T Consensus 125 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 158 (265)
T cd06631 125 HRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH---------------------------------------------- 158 (265)
T ss_pred cCCcCHHhEEECCCCeEEeccchhhHhhhhcccc----------------------------------------------
Confidence 9999999999999999999999987432110000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
...........|+..|+|||++.+..++.++|||||||++|+|++|..||...+
T Consensus 159 --------------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 212 (265)
T cd06631 159 --------------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD 212 (265)
T ss_pred --------------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence 000011123468999999999998889999999999999999999999998776
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.......+.......+...... ..++.++|.+||..+|.+||++. |+++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~l~~~p~~Rp~~~----~~l~~~~~ 265 (265)
T cd06631 213 RLAAMFYIGAHRGLMPRLPDSF------SAAAIDFVTSCLTRDQHERPSAL----QLLRHDFL 265 (265)
T ss_pred hHHHHHHhhhccCCCCCCCCCC------CHHHHHHHHHHhcCCcccCCCHH----HHhcCCCC
Confidence 6555444443322222222222 22489999999999999999998 99999997
No 149
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.2e-43 Score=342.91 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=199.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA- 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~- 160 (517)
.+.|++.+.||+|+||.||+|.... +++.||+|++.... .....+..|+.+++++ +||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVK-----TGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 75 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcC-----CCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeec
Confidence 3579999999999999999999876 67899999986542 1223456689999998 79999999999864
Q ss_pred -----CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 161 -----SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 161 -----~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
...+|+||||+++|+|.+++.......+..... +.++.||+.||+||
T Consensus 76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~----------------------------~~~~~qi~~~l~~L 127 (272)
T cd06637 76 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI----------------------------AYICREILRGLSHL 127 (272)
T ss_pred CCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHH----------------------------HHHHHHHHHHHHHH
Confidence 346899999999999999887643333333222 36789999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|+++|+||||||+||+++.++.++|+|||++......
T Consensus 128 H~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~------------------------------------------- 164 (272)
T cd06637 128 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT------------------------------------------- 164 (272)
T ss_pred HHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc-------------------------------------------
Confidence 9999999999999999999999999999998432110
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHH
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEM 390 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~el 390 (517)
........|++.|+|||++.+ ..++.++|||||||++|||
T Consensus 165 -----------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el 209 (272)
T cd06637 165 -----------------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209 (272)
T ss_pred -----------------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence 001223468999999999863 3578899999999999999
Q ss_pred hhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 391 LYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 391 ltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
++|..||...........+.......... . ....++.+||.+||..||.+||++. ++++||||
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~li~~~l~~~p~~Rpt~~----~il~~~~~ 272 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRLKS-K------KWSKKFQSFIESCLVKNHSQRPTTE----QLMKHPFI 272 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCCCC-C------CcCHHHHHHHHHHcCCChhhCCCHH----HHhhCCCC
Confidence 99999998766555444443322111110 1 1123589999999999999999998 99999998
No 150
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.6e-43 Score=360.67 Aligned_cols=289 Identities=16% Similarity=0.186 Sum_probs=204.0
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
+.+..++|++.+.||+|+||.||+|++.......+...||||++...... .....+.+|+.+++.+ +|||||+++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 34566789999999999999999999765433335568999999754322 2345677799999999 89999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccch--hh---------hh-hhhh----------------hh------
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSA--KF---------VF-FLLF----------------FF------ 203 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~--~~---------~~-~~l~----------------~~------ 203 (517)
+...+.+|+|||||++|+|.+++............. .. .. ...+ .+
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 999999999999999999999986532110000000 00 00 0000 00
Q ss_pred ------hhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccC
Q 010140 204 ------FYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 277 (517)
Q Consensus 204 ------~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~ 277 (517)
.................++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--- 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--- 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc---
Confidence 00000000111233445678999999999999999999999999999999999999999999843221000
Q ss_pred CcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 010140 278 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 357 (517)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (517)
.......
T Consensus 268 -------------------------------------------------------------------------~~~~~~~ 274 (374)
T cd05106 268 -------------------------------------------------------------------------YVVKGNA 274 (374)
T ss_pred -------------------------------------------------------------------------eeeccCC
Confidence 0001122
Q ss_pred CCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHH
Q 010140 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 436 (517)
Q Consensus 358 ~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dL 436 (517)
.+++.|||||++.+..++.++|||||||++|||++ |..||........+..+.......+.... .+.++.+|
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~l 347 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDF-------APPEIYSI 347 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCC-------CCHHHHHH
Confidence 35678999999998889999999999999999997 99999887655555454443322221111 12358999
Q ss_pred HHHhccCCcccccCCC
Q 010140 437 ISKLLVKNPKKRIGSL 452 (517)
Q Consensus 437 i~~~L~~dP~~R~t~~ 452 (517)
|.+||+.||++||++.
T Consensus 348 i~~cl~~dp~~RPs~~ 363 (374)
T cd05106 348 MKMCWNLEPTERPTFS 363 (374)
T ss_pred HHHHcCCChhhCcCHH
Confidence 9999999999999997
No 151
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.8e-43 Score=344.81 Aligned_cols=263 Identities=26% Similarity=0.350 Sum_probs=198.4
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+|+++. ++..||||++...... ......+..|+.+++.++||||+++++++.+++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKK-----TGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECC-----CCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeE
Confidence 58999999999999999999876 5788999998653211 12234566799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCC-CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 165 CLVMEYCPGGDLYAARQRQPG-KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
|+||||++ ++|.+++..... ..+... .++.++.||+.||+|||++||+||
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~----------------------------~~~~~~~qi~~~L~~lH~~~i~H~ 125 (285)
T cd07861 75 YLIFEFLS-MDLKKYLDSLPKGQYMDAE----------------------------LVKSYLYQILQGILFCHSRRVLHR 125 (285)
T ss_pred EEEEecCC-CCHHHHHhcCCCCCcCCHH----------------------------HHHHHHHHHHHHHHHHHhCCeeec
Confidence 99999996 688888765432 222222 224678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.+|.+||+|||++.......
T Consensus 126 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 155 (285)
T cd07861 126 DLKPQNLLIDNKGVIKLADFGLARAFGIPV-------------------------------------------------- 155 (285)
T ss_pred CCCHHHEEEcCCCcEEECcccceeecCCCc--------------------------------------------------
Confidence 999999999999999999999974321100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+...
T Consensus 156 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~ 207 (285)
T cd07861 156 ----------------------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE 207 (285)
T ss_pred ----------------------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 001122578899999998765 478999999999999999999999998766
Q ss_pred HHHHHHHhcCCCCC------------------CCCCCCC--chhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 403 EKTLINILKKPLTF------------------PRIGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 403 ~~~~~~i~~~~~~~------------------p~~~~~~--~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
......+....... +...... ........++.+||.+||+.||.+|||+. +++.||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~----~ll~~~ 283 (285)
T cd07861 208 IDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK----KALNHP 283 (285)
T ss_pred HHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH----HHhcCC
Confidence 54443332211000 0000000 00001234578999999999999999998 999999
Q ss_pred Cc
Q 010140 463 FF 464 (517)
Q Consensus 463 ~f 464 (517)
||
T Consensus 284 ~~ 285 (285)
T cd07861 284 YF 285 (285)
T ss_pred CC
Confidence 98
No 152
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.5e-43 Score=343.54 Aligned_cols=254 Identities=27% Similarity=0.400 Sum_probs=198.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|++.. +++.||+|++..+.. ......+..|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLL-----TRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENR 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcC-----CCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCE
Confidence 468999999999999999999876 678899999865421 1233557779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.++||||+++++|..+. .+++. .+..++.||+.||+|||++||+|+
T Consensus 74 ~~lv~e~~~~~~l~~~~------~~~~~----------------------------~~~~~~~qi~~~l~~lH~~~i~H~ 119 (279)
T cd06619 74 ISICTEFMDGGSLDVYR------KIPEH----------------------------VLGRIAVAVVKGLTYLWSLKILHR 119 (279)
T ss_pred EEEEEecCCCCChHHhh------cCCHH----------------------------HHHHHHHHHHHHHHHHHHCCEeeC
Confidence 99999999999986431 11111 123678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.++|+|||++.....
T Consensus 120 dlkp~Nill~~~~~~~l~dfg~~~~~~~---------------------------------------------------- 147 (279)
T cd06619 120 DVKPSNMLVNTRGQVKLCDFGVSTQLVN---------------------------------------------------- 147 (279)
T ss_pred CCCHHHEEECCCCCEEEeeCCcceeccc----------------------------------------------------
Confidence 9999999999999999999999832210
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh-
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN- 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~- 402 (517)
......+||..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 148 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~ 199 (279)
T cd06619 148 ----------------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKN 199 (279)
T ss_pred ----------------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccc
Confidence 011234689999999999988899999999999999999999999975321
Q ss_pred ------HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 403 ------EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 403 ------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
......+...... ..... ....++.+||.+||+.||++||++. |+++||||...+-
T Consensus 200 ~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~li~~~l~~~P~~Rp~~~----eil~~~~~~~~~~ 261 (279)
T cd06619 200 QGSLMPLQLLQCIVDEDPP--VLPVG-----QFSEKFVHFITQCMRKQPKERPAPE----NLMDHPFIVQYND 261 (279)
T ss_pred ccccchHHHHHHHhccCCC--CCCCC-----cCCHHHHHHHHHHhhCChhhCCCHH----HHhcCcccccccC
Confidence 1222222222111 11000 1123589999999999999999997 9999999987653
No 153
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.7e-43 Score=343.24 Aligned_cols=262 Identities=32% Similarity=0.600 Sum_probs=196.0
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHH---HHHHHhcCCCCccceeeeeecCceeEEE
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME---KVILTMLDHPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E---~~il~~l~HpnIv~l~~~~~~~~~~~lV 167 (517)
.||+|+||.||+|++.. +++.||+|++.+..............| +.+++..+||||+++++++...+..|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEec-----CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence 48999999999999876 678999999876432211111112223 3445556899999999999999999999
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCC
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKP 247 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp 247 (517)
|||++||+|..++... ..+++.. ++.|+.|++.||+|||+++|+||||||
T Consensus 76 ~e~~~g~~L~~~l~~~--~~l~~~~----------------------------~~~~~~ql~~~l~~lH~~~i~H~di~p 125 (278)
T cd05606 76 LDLMNGGDLHYHLSQH--GVFSEAE----------------------------MRFYAAEIILGLEHMHNRFVVYRDLKP 125 (278)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEEcCCCCH
Confidence 9999999998887653 2233322 246789999999999999999999999
Q ss_pred CceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccc
Q 010140 248 ENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIR 327 (517)
Q Consensus 248 ~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (517)
+||+++.++.+||+|||++..+..
T Consensus 126 ~nili~~~~~~kl~dfg~~~~~~~-------------------------------------------------------- 149 (278)
T cd05606 126 ANILLDEHGHVRISDLGLACDFSK-------------------------------------------------------- 149 (278)
T ss_pred HHEEECCCCCEEEccCcCccccCc--------------------------------------------------------
Confidence 999999999999999998732210
Q ss_pred cccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC---hH
Q 010140 328 EQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN---NE 403 (517)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~---~~ 403 (517)
.......|+..|+|||++.+. .++.++||||+||++|+|++|+.||.+.. ..
T Consensus 150 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~ 205 (278)
T cd05606 150 ------------------------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 205 (278)
T ss_pred ------------------------cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH
Confidence 001123689999999999754 58999999999999999999999998763 22
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccccCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIRSIK 476 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~~~~ 476 (517)
.....+.......|... +.++.++|.+||..||.+|+... ..+.++++||||++++|+.+....
T Consensus 206 ~~~~~~~~~~~~~~~~~---------s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 270 (278)
T cd05606 206 EIDRMTLTMAVELPDSF---------SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQK 270 (278)
T ss_pred HHHHHhhccCCCCCCcC---------CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhcc
Confidence 32222322223332211 22589999999999999999321 123499999999999999775443
No 154
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.6e-43 Score=344.90 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=204.5
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++.+.||+|+||.||+|.+.. +++.||+|.+...... ....+.+|+.+++.++||||+++++.+..+.
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~ 90 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVA-----TGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGD 90 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECC-----CCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 4689999999999999999999876 5678999998754322 2345667999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
+.|+||||++|++|.+++... .+... ++..++.|++.||+|||++||+|
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~---~~~~~----------------------------~~~~i~~ql~~aL~~LH~~gi~H 139 (296)
T cd06654 91 ELWVVMEYLAGGSLTDVVTET---CMDEG----------------------------QIAAVCRECLQALEFLHSNQVIH 139 (296)
T ss_pred EEEEeecccCCCCHHHHHHhc---CCCHH----------------------------HHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999988542 12222 12367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||++......
T Consensus 140 ~dLkp~Nill~~~~~~kl~dfg~~~~~~~~-------------------------------------------------- 169 (296)
T cd06654 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-------------------------------------------------- 169 (296)
T ss_pred CCCCHHHEEEcCCCCEEECccccchhcccc--------------------------------------------------
Confidence 999999999999999999999987432110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||.....
T Consensus 170 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~ 221 (296)
T cd06654 170 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221 (296)
T ss_pred ----------------------------ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0011223588999999999988899999999999999999999999988776
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
......+........... . .....+.+||.+||..||++||++. ++++||||...
T Consensus 222 ~~~~~~~~~~~~~~~~~~-~-----~~~~~l~~li~~~l~~~p~~Rpt~~----eil~~~~~~~~ 276 (296)
T cd06654 222 LRALYLIATNGTPELQNP-E-----KLSAIFRDFLNRCLDMDVEKRGSAK----ELLQHQFLKIA 276 (296)
T ss_pred HHhHHHHhcCCCCCCCCc-c-----ccCHHHHHHHHHHCcCCcccCcCHH----HHhhChhhhcc
Confidence 544433333221111111 0 1223589999999999999999998 99999999854
No 155
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.2e-43 Score=358.78 Aligned_cols=292 Identities=17% Similarity=0.212 Sum_probs=204.3
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 158 (517)
.+..++|++.+.||+|+||.||+|++.......++..||||+++..... .....+.+|+.+|..+ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc--HHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 4556789999999999999999998653222235678999998754321 2345677799999999 899999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccC-----ccchhhhhhhhhh----------h---hhc--------------
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFG-----ISSAKFVFFLLFF----------F---FYN-------------- 206 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~-----~~~~~~~~~~l~~----------~---~~~-------------- 206 (517)
..++..|+|||||+||+|.+++......... .........++.. + ...
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 9999999999999999999998764311000 0000000000000 0 000
Q ss_pred --CCcc-----------ccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccc
Q 010140 207 --NLGF-----------VHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 273 (517)
Q Consensus 207 --~~~~-----------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~ 273 (517)
...+ ..........+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 0000 000112334567899999999999999999999999999999999999999999984332100
Q ss_pred cccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 010140 274 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 353 (517)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (517)
. ...
T Consensus 269 ~----------------------------------------------------------------------------~~~ 272 (375)
T cd05104 269 N----------------------------------------------------------------------------YVV 272 (375)
T ss_pred c----------------------------------------------------------------------------ccc
Confidence 0 000
Q ss_pred CcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhh
Q 010140 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 432 (517)
Q Consensus 354 ~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 432 (517)
.....++..|+|||++.+..++.++|||||||++|||++ |..||.+......+.+.+.......... .. ..+
T Consensus 273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~ 345 (375)
T cd05104 273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPE-CA------PSE 345 (375)
T ss_pred cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCC-CC------CHH
Confidence 112235678999999999899999999999999999997 8999988765544444444332221111 11 125
Q ss_pred HHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 433 LQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 433 l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+.+||.+||+.||++||++. |+++
T Consensus 346 l~~li~~cl~~dP~~RPs~~----eil~ 369 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFK----QIVQ 369 (375)
T ss_pred HHHHHHHHccCChhHCcCHH----HHHH
Confidence 89999999999999999997 6654
No 156
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-43 Score=349.61 Aligned_cols=261 Identities=30% Similarity=0.433 Sum_probs=204.4
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 159 (517)
+....|+++++||+||-+.||++...+ ...||+|.+.... .....+.-+..|+.+|.+| .|.+||+||+|-.
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~------~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD------KQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC------CcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 345679999999999999999998664 4567777665432 2345567788899999999 5999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.++++||||||- ..||..+|+....... .|.+++|..||+.|+.++|..|
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~~~~~-----------------------------~~~lk~ywkqML~aV~~IH~~g 480 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKKSIDP-----------------------------DWFLKFYWKQMLLAVKTIHQHG 480 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhccCCCc-----------------------------hHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999987 6799999887532211 1234688899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|||.||||.|+|+ -.|.+||+|||+|..+.....
T Consensus 481 IVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTT--------------------------------------------- 514 (677)
T KOG0596|consen 481 IVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTT--------------------------------------------- 514 (677)
T ss_pred eeecCCCcccEEE-EeeeEEeeeechhcccCcccc---------------------------------------------
Confidence 9999999999998 468999999999954432111
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-----------CCccchHHHHHHHHH
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-----------HGSAVDWWTLGVFLY 388 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-----------~~~~~DiWSlGvil~ 388 (517)
+-...+-+||+.||+||.+.... .+.++||||||||||
T Consensus 515 -------------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILY 563 (677)
T KOG0596|consen 515 -------------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILY 563 (677)
T ss_pred -------------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHH
Confidence 11223458999999999996432 467899999999999
Q ss_pred HHhhCCCCCCCCCh-HHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 389 EMLYGTTPFKGENN-EKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 389 elltG~~Pf~~~~~-~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
+|+.|++||..... ...+..|..-. +.||...... ++.++++.||.+||++||++. |||+|||+.
T Consensus 564 qMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~--------~li~~mK~CL~rdPkkR~si~----eLLqhpFl~ 631 (677)
T KOG0596|consen 564 QMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEND--------ELIDVMKCCLARDPKKRWSIP----ELLQHPFLQ 631 (677)
T ss_pred HHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCch--------HHHHHHHHHHhcCcccCCCcH----HHhcCcccc
Confidence 99999999986553 34444554432 3555544332 389999999999999999998 999999998
Q ss_pred CC
Q 010140 466 GI 467 (517)
Q Consensus 466 ~~ 467 (517)
.+
T Consensus 632 ~~ 633 (677)
T KOG0596|consen 632 IQ 633 (677)
T ss_pred cc
Confidence 63
No 157
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=7.8e-43 Score=338.13 Aligned_cols=265 Identities=42% Similarity=0.723 Sum_probs=213.7
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||.|+||.||+|++.. +++.||+|++.............+.+|+.++++++||||+++++.+..+...|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKS-----TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECC-----CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence 6899999999999876 57899999998765554566677888999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
++++|.+++.... .++.... ..++.||+.||+|||++|++||||+|+||+
T Consensus 76 ~~~~L~~~l~~~~--~~~~~~~----------------------------~~i~~qi~~~L~~lH~~~i~H~di~~~nil 125 (265)
T cd05579 76 PGGDLASLLENVG--SLDEDVA----------------------------RIYIAEIVLALEYLHSNGIIHRDLKPDNIL 125 (265)
T ss_pred CCCcHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHcCeecCCCCHHHeE
Confidence 9999999887642 2222222 367899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.++|+|||++..........
T Consensus 126 ~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------------------------------- 150 (265)
T cd05579 126 IDSNGHLKLTDFGLSKVGLVRRQIN------------------------------------------------------- 150 (265)
T ss_pred EcCCCCEEEEecccchhcccCcccc-------------------------------------------------------
Confidence 9999999999999974322100000
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhc
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 411 (517)
............++..|+|||.+.+..++.++|||||||++|+|++|..||......+....+..
T Consensus 151 ---------------~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 215 (265)
T cd05579 151 ---------------LNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN 215 (265)
T ss_pred ---------------cccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 00000112234688899999999888889999999999999999999999998888888877776
Q ss_pred CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 412 ~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
+...++.... ....+.+||.+||+.+|.+||++ ..+.++++||||++++|
T Consensus 216 ~~~~~~~~~~-------~~~~~~~~i~~~l~~~p~~Rpt~-~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 216 GKIEWPEDVE-------VSDEAIDLISKLLVPDPEKRLGA-KSIEEIKNHPFFKGIDW 265 (265)
T ss_pred CCcCCCcccc-------CCHHHHHHHHHHhcCCHhhcCCC-ccHHHHhcCccccCCCC
Confidence 5555443321 12358999999999999999999 34459999999999998
No 158
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-44 Score=357.61 Aligned_cols=254 Identities=27% Similarity=0.424 Sum_probs=202.6
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
-+||+|+||+||.|++++ ++...|||.+..... ...+-+..|+.+.++|+|.|||+++|.+..++++-+.||
T Consensus 581 vVLGKGTYG~VYA~RD~~-----tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME 652 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMD-----TQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME 652 (1226)
T ss_pred EEeecCceeEEEeecccc-----ceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence 479999999999999998 677899999975543 334455669999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
-++||+|..+++.. +|.+++. +..+-+|.+||++||.|||++.|||||||-+|
T Consensus 653 qVPGGSLSsLLrsk------------------------WGPlKDN---Estm~fYtkQILeGLkYLHen~IVHRDIKGDN 705 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSK------------------------WGPLKDN---ESTMNFYTKQILEGLKYLHENKIVHRDIKGDN 705 (1226)
T ss_pred cCCCCcHHHHHHhc------------------------cCCCccc---hhHHHHHHHHHHHHhhhhhhcceeeccccCCc
Confidence 99999999988763 1222111 11234789999999999999999999999999
Q ss_pred eEEc-cCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 250 VLVR-EDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 250 ILl~-~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
+||+ -.|.+||+|||.++++...
T Consensus 706 VLvNTySGvlKISDFGTsKRLAgi-------------------------------------------------------- 729 (1226)
T KOG4279|consen 706 VLVNTYSGVLKISDFGTSKRLAGI-------------------------------------------------------- 729 (1226)
T ss_pred EEEeeccceEEecccccchhhccC--------------------------------------------------------
Confidence 9997 4789999999998665421
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhhCCCCCCCCCh-HHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENN-EKT 405 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~elltG~~Pf~~~~~-~~~ 405 (517)
+..+.++.||..|||||++... +|+.++|||||||++.||.||++||..... ...
T Consensus 730 ----------------------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA 787 (1226)
T KOG4279|consen 730 ----------------------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA 787 (1226)
T ss_pred ----------------------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh
Confidence 2234567899999999999765 489999999999999999999999986544 333
Q ss_pred HHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 406 LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 406 ~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
+.++---. ..|+.. .+...+++.||.+|+.+||.+||++. ++|..||++.-
T Consensus 788 MFkVGmyK-vHP~iP------eelsaeak~FilrcFepd~~~R~sA~----~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 788 MFKVGMYK-VHPPIP------EELSAEAKNFILRCFEPDPCDRPSAK----DLLQDPFLQHN 838 (1226)
T ss_pred hhhhccee-cCCCCc------HHHHHHHHHHHHHHcCCCcccCccHH----HhccCcccccC
Confidence 43332111 112211 13344689999999999999999998 99999999754
No 159
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-44 Score=354.57 Aligned_cols=257 Identities=22% Similarity=0.316 Sum_probs=203.7
Q ss_pred hcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceee
Q 010140 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA 156 (517)
Q Consensus 77 ~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~ 156 (517)
..+.+..+++.+...||+|.||+||+|++.+ .||||+++.+.... .+++.|..|+.++++-+|.||+-++|
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--------dVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--------DVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMG 455 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--------ceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeeh
Confidence 5577888899999999999999999999986 48999998765543 47889999999999999999999999
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
++..... .||..+|+|.+|+.++.... ..+ ....++.|++||++|+.|||
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkf----------------------------dm~~~idIAqQiaqGM~YLH 505 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHVQE-TKF----------------------------DMNTTIDIAQQIAQGMDYLH 505 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccchh-hhh----------------------------hHHHHHHHHHHHHHhhhhhh
Confidence 9998887 99999999999999876532 111 12234589999999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
.++|||||||..||++.++++|||+|||++..-...
T Consensus 506 AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w-------------------------------------------- 541 (678)
T KOG0193|consen 506 AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW-------------------------------------------- 541 (678)
T ss_pred hhhhhhhhccccceEEccCCcEEEecccceeeeeee--------------------------------------------
Confidence 999999999999999999999999999998321100
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---CCCccchHHHHHHHHHHHhhC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~~~~~~DiWSlGvil~elltG 393 (517)
. .........|...|||||+++.+ +|+..+|||||||++|||++|
T Consensus 542 --------------~------------------g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg 589 (678)
T KOG0193|consen 542 --------------S------------------GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG 589 (678)
T ss_pred --------------c------------------cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence 0 00112233578899999999754 589999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 394 TTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..||.....+.++..+-++.. .|+...... .+..++++|+..||.+++++||.+.
T Consensus 590 ~lPysi~~~dqIifmVGrG~l-~pd~s~~~s---~~pk~mk~Ll~~C~~~~~~eRP~F~ 644 (678)
T KOG0193|consen 590 ELPYSIQNRDQIIFMVGRGYL-MPDLSKIRS---NCPKAMKRLLSDCWKFDREERPLFP 644 (678)
T ss_pred cCCcCCCChhheEEEeccccc-Cccchhhhc---cCHHHHHHHHHHHHhcCcccCccHH
Confidence 999996655555555544422 222221111 2233699999999999999999997
No 160
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-43 Score=368.50 Aligned_cols=271 Identities=23% Similarity=0.300 Sum_probs=219.0
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+...+.++.+.||+|+||+||+|+..+...+.....||||.++..... +...+|++|+++|..|+|||||+|+|++.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~--~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN--QARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH--HHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 3566788999999999999999999887665567889999999876543 45678889999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.++.+|||+|||..|||.++|.....+.-.... |-.....+...+...|+.||+.|++||-++.
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~----------------g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~ 623 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLAS----------------GQDTPPPLSTSQFLHIATQIAAGMEYLSSHH 623 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccC----------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999876433211100 0000122334455689999999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
+|||||..+|+||.++..|||+|||+++.+....-+
T Consensus 624 FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYY-------------------------------------------- 659 (774)
T KOG1026|consen 624 FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYY-------------------------------------------- 659 (774)
T ss_pred ccccchhhhhceeccceEEEecccccchhhhhhhhh--------------------------------------------
Confidence 999999999999999999999999999654321111
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
.......-..+|||||.|....|++++||||+||+|||+++ |..||.
T Consensus 660 --------------------------------k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~ 707 (774)
T KOG1026|consen 660 --------------------------------KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY 707 (774)
T ss_pred --------------------------------cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc
Confidence 00111123568999999999999999999999999999996 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+..+.+++..|..+.. .+.... ++.++.+||..||+.+|.+||++.
T Consensus 708 glSn~EVIe~i~~g~l-L~~Pe~-------CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 708 GLSNQEVIECIRAGQL-LSCPEN-------CPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred ccchHHHHHHHHcCCc-ccCCCC-------CCHHHHHHHHHHhhcCcccCCCHH
Confidence 9999999999998876 332221 223599999999999999999996
No 161
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-43 Score=341.79 Aligned_cols=238 Identities=16% Similarity=0.176 Sum_probs=191.6
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec----CceeE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA----SHYSC 165 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~ 165 (517)
..||+|++|.||+|+.. ++.||||++.............+.+|+.+|++++||||+++++++.+ ...++
T Consensus 26 ~~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence 57999999999999874 47899999986544333445677889999999999999999999876 45789
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc-Cceecc
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM-GIVYRD 244 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~iiHrD 244 (517)
+|||||+||+|.+++... ..+..... ..++.|++.||.|||+. +++|||
T Consensus 99 lv~Ey~~~g~L~~~l~~~--~~~~~~~~----------------------------~~i~~~i~~~l~~lH~~~~~~Hrd 148 (283)
T PHA02988 99 LILEYCTRGYLREVLDKE--KDLSFKTK----------------------------LDMAIDCCKGLYNLYKYTNKPYKN 148 (283)
T ss_pred EEEEeCCCCcHHHHHhhC--CCCChhHH----------------------------HHHHHHHHHHHHHHHhcCCCCCCc
Confidence 999999999999998754 22222222 36789999999999984 999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+|||++.++.+||+|||+++.+..
T Consensus 149 lkp~nill~~~~~~kl~dfg~~~~~~~----------------------------------------------------- 175 (283)
T PHA02988 149 LTSVSFLVTENYKLKIICHGLEKILSS----------------------------------------------------- 175 (283)
T ss_pred CChhhEEECCCCcEEEcccchHhhhcc-----------------------------------------------------
Confidence 999999999999999999999743210
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC--CCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~--~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
......||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+.
T Consensus 176 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~ 227 (283)
T PHA02988 176 ----------------------------PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT 227 (283)
T ss_pred ----------------------------ccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH
Confidence 0012358899999999976 5689999999999999999999999999888
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+.+..+.......+.. .. .+..+.+||.+||+.||++||++.
T Consensus 228 ~~~~~~i~~~~~~~~~~-~~------~~~~l~~li~~cl~~dp~~Rps~~ 270 (283)
T PHA02988 228 KEIYDLIINKNNSLKLP-LD------CPLEIKCIVEACTSHDSIKRPNIK 270 (283)
T ss_pred HHHHHHHHhcCCCCCCC-Cc------CcHHHHHHHHHHhcCCcccCcCHH
Confidence 88777776544333211 11 123589999999999999999997
No 162
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=8.7e-43 Score=341.97 Aligned_cols=277 Identities=23% Similarity=0.287 Sum_probs=208.7
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||+|+||.||+|.............||+|.+..... ......+.+|+.++..++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC--HHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 44578999999999999999999987644333557899999875422 2334567789999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+..|++|||+++|+|.+++............. .............+..++.||+.||.|||++||
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i 145 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAES--------------GDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF 145 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCccccccc--------------ccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 999999999999999999987643211100000 000000112223345789999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.+||+|||+++.......
T Consensus 146 ~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~---------------------------------------------- 179 (283)
T cd05048 146 VHRDLAARNCLVGEGLTVKISDFGLSRDIYSADY---------------------------------------------- 179 (283)
T ss_pred eccccccceEEEcCCCcEEECCCcceeecccccc----------------------------------------------
Confidence 9999999999999999999999999843211000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 180 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 180 ------------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred ------------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 001122356889999999988889999999999999999998 9999999
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
....+....+........ .. ..+.++.+|+.+||+.||.+||++. |++++
T Consensus 230 ~~~~~~~~~i~~~~~~~~--~~------~~~~~~~~l~~~c~~~~p~~Rp~~~----~i~~~ 279 (283)
T cd05048 230 FSNQEVIEMIRSRQLLPC--PE------DCPARVYALMIECWNEIPARRPRFK----DIHTR 279 (283)
T ss_pred CCHHHHHHHHHcCCcCCC--cc------cCCHHHHHHHHHHccCChhhCcCHH----HHHHH
Confidence 888777777665443211 11 1223589999999999999999997 77654
No 163
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.4e-42 Score=340.40 Aligned_cols=258 Identities=30% Similarity=0.425 Sum_probs=203.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
-|++.+.||+|+||.||+|.+.. ++..+++|.+..... .....+.+|+.+++.++||||+++++++..++..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~ 77 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKE-----TGVLAAAKVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 77 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECC-----CCeEEEEEEeCCCCH---HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEE
Confidence 36888999999999999999886 567899999865422 2345566799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++++|..++.... ..+.... +..++.||+.||.|||+.||+|||
T Consensus 78 ~~v~e~~~~~~l~~~~~~~~-~~l~~~~----------------------------~~~~~~qi~~~L~~LH~~~i~H~d 128 (282)
T cd06643 78 WILIEFCAGGAVDAVMLELE-RPLTEPQ----------------------------IRVVCKQTLEALNYLHENKIIHRD 128 (282)
T ss_pred EEEEEecCCCcHHHHHHhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeeecC
Confidence 99999999999988765421 1222222 236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+|||++.++.+||+|||++......
T Consensus 129 lkp~nili~~~~~~kl~dfg~~~~~~~~---------------------------------------------------- 156 (282)
T cd06643 129 LKAGNILFTLDGDIKLADFGVSAKNTRT---------------------------------------------------- 156 (282)
T ss_pred CCcccEEEccCCCEEEcccccccccccc----------------------------------------------------
Confidence 9999999999999999999997432100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc-----CCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~-----~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
........|++.|+|||++. +..++.++|||||||++|+|++|.+||..
T Consensus 157 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 210 (282)
T cd06643 157 --------------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHE 210 (282)
T ss_pred --------------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccc
Confidence 00112345889999999984 34477899999999999999999999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
.+..+....+............. ...++.+||.+||+.||.+||++. ++++||||+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~ 268 (282)
T cd06643 211 LNPMRVLLKIAKSEPPTLAQPSR------WSSEFKDFLKKCLEKNVDARWTTT----QLLQHPFVTVN 268 (282)
T ss_pred cCHHHHHHHHhhcCCCCCCCccc------cCHHHHHHHHHHccCChhhCcCHH----HHhcCCCEecc
Confidence 87776666665443221111111 122589999999999999999998 99999999854
No 164
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-42 Score=341.23 Aligned_cols=257 Identities=28% Similarity=0.413 Sum_probs=199.0
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeee-
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE- 159 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~- 159 (517)
..+.|++.+.||.|+||.||+|++.. .++.||+|++.... .....+..|+.+++++ +||||+++++++.
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVK-----TGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcC-----CCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 44789999999999999999999876 67889999986543 2234456688999988 7999999999985
Q ss_pred -----cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 160 -----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 160 -----~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
.....|+||||+++|+|.+++.......+.... +..++.||+.||.|
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~----------------------------~~~~~~qi~~al~~ 136 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDW----------------------------IAYICREILRGLAH 136 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHH----------------------------HHHHHHHHHHHHHH
Confidence 356789999999999999988765433332221 23577899999999
Q ss_pred HHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
||++||+||||||+||+++.++.++|+|||++......
T Consensus 137 LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~------------------------------------------ 174 (282)
T cd06636 137 LHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT------------------------------------------ 174 (282)
T ss_pred HHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcc------------------------------------------
Confidence 99999999999999999999999999999987432100
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc-----CCCCCccchHHHHHHHHHH
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYE 389 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~-----~~~~~~~~DiWSlGvil~e 389 (517)
........|++.|+|||++. +..++.++|||||||++||
T Consensus 175 ------------------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~e 218 (282)
T cd06636 175 ------------------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE 218 (282)
T ss_pred ------------------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHH
Confidence 00112346899999999986 3457889999999999999
Q ss_pred HhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 390 MLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 390 lltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
|++|..||...........+....... .... ....++.+||.+||..||.+||++. ||++||||
T Consensus 219 l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~----ell~~~~~ 282 (282)
T cd06636 219 MAEGAPPLCDMHPMRALFLIPRNPPPK--LKSK-----KWSKKFIDFIEGCLVKNYLSRPSTE----QLLKHPFI 282 (282)
T ss_pred HHhCCCCccccCHHhhhhhHhhCCCCC--Cccc-----ccCHHHHHHHHHHhCCChhhCcCHH----HHhcCCCC
Confidence 999999998766554444333321111 1100 1123589999999999999999998 99999997
No 165
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.3e-42 Score=334.83 Aligned_cols=261 Identities=27% Similarity=0.399 Sum_probs=204.7
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH------HHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL------AIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
+|.+.+.||+|+||.||+|.+.. .++.||+|.+..... ........+.+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNAS-----SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecC-----CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 47788999999999999999876 567899998854321 1223456778899999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
...+..++||||+++++|.+++... ..++... ++.++.|++.||+|||++
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~----------------------------~~~~~~~l~~~l~~lH~~ 125 (267)
T cd06628 76 LDADHLNIFLEYVPGGSVAALLNNY--GAFEETL----------------------------VRNFVRQILKGLNYLHNR 125 (267)
T ss_pred EeCCccEEEEEecCCCCHHHHHHhc--cCccHHH----------------------------HHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998664 2222222 236789999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|++||||||+||+++.++.++|+|||+++........
T Consensus 126 ~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------- 162 (267)
T cd06628 126 GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLS------------------------------------------- 162 (267)
T ss_pred CcccccCCHHHEEEcCCCCEEecccCCCccccccccc-------------------------------------------
Confidence 9999999999999999999999999998543210000
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
...........|+..|+|||.+.+..++.++|||||||++|+|++|+.||.
T Consensus 163 -----------------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 213 (267)
T cd06628 163 -----------------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFP 213 (267)
T ss_pred -----------------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence 000011123468899999999998889999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
+.+....+..+..... +...... ...+.++|.+||+.||.+||++. |+++||||
T Consensus 214 ~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~ 267 (267)
T cd06628 214 DCTQLQAIFKIGENAS--PEIPSNI------SSEAIDFLEKTFEIDHNKRPTAA----ELLKHPFL 267 (267)
T ss_pred CccHHHHHHHHhccCC--CcCCccc------CHHHHHHHHHHccCCchhCcCHH----HHhhCCCC
Confidence 8766555555444211 1111111 22589999999999999999998 99999997
No 166
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9e-43 Score=344.57 Aligned_cols=258 Identities=24% Similarity=0.364 Sum_probs=203.4
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++++.||+|+||.||+|.+.. +++.||+|.+...... ....+..|+.+++.++||||+++++++..++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 89 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIA-----TGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGD 89 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECC-----CCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 3789999999999999999999876 6788999998654322 2345667999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|.+++.... +... .+..++.|++.||.|||+.||+|
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~~---~~~~----------------------------~~~~~~~~l~~~L~~LH~~~i~H 138 (297)
T cd06656 90 ELWVVMEYLAGGSLTDVVTETC---MDEG----------------------------QIAAVCRECLQALDFLHSNQVIH 138 (297)
T ss_pred EEEEeecccCCCCHHHHHHhCC---CCHH----------------------------HHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999876431 2211 22367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.++|+|||++......
T Consensus 139 ~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~-------------------------------------------------- 168 (297)
T cd06656 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-------------------------------------------------- 168 (297)
T ss_pred CCCCHHHEEECCCCCEEECcCccceEccCC--------------------------------------------------
Confidence 999999999999999999999987432110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 169 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~ 220 (297)
T cd06656 169 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (297)
T ss_pred ----------------------------ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 0011223588999999999988899999999999999999999999987665
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
......+............ .....+++||.+||..||++||++. ++++||||+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~----~il~~~~~~~~ 275 (297)
T cd06656 221 LRALYLIATNGTPELQNPE------RLSAVFRDFLNRCLEMDVDRRGSAK----ELLQHPFLKLA 275 (297)
T ss_pred chheeeeccCCCCCCCCcc------ccCHHHHHHHHHHccCChhhCcCHH----HHhcCchhccc
Confidence 4433322222111110000 1123488999999999999999998 99999999854
No 167
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.4e-43 Score=339.94 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=201.4
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|.+.+.||+|+||.||+|++.. +++.||+|+++.... .....+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~---~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~ 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVN-----TGELAAIKVIKLEPG---EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR 78 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcC-----CCcEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Confidence 34689999999999999999999876 678899999865432 2234456799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||+++++|.+++.... .++... ++.++.||+.||.|||++||+
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~ 128 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHVTG--PLSESQ----------------------------IAYVSRETLQGLYYLHSKGKM 128 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCee
Confidence 99999999999999999886542 233222 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.++|+|||++......
T Consensus 129 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~------------------------------------------------- 159 (267)
T cd06645 129 HRDIKGANILLTDNGHVKLADFGVSAQITAT------------------------------------------------- 159 (267)
T ss_pred cCCCCHHHEEECCCCCEEECcceeeeEccCc-------------------------------------------------
Confidence 9999999999999999999999997432210
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc---CCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~---~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........|++.|+|||++. ...++.++|||||||++|+|++|..||.
T Consensus 160 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~ 210 (267)
T cd06645 160 -----------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred -----------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcc
Confidence 00112346899999999985 4457889999999999999999999997
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
..................+..... ......+.+||.+||..||++||++. ++++|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~----~ll~~~~ 267 (267)
T cd06645 211 DLHPMRALFLMTKSNFQPPKLKDK----MKWSNSFHHFVKMALTKNPKKRPTAE----KLLQHPF 267 (267)
T ss_pred cccchhhHHhhhccCCCCCccccc----CCCCHHHHHHHHHHccCCchhCcCHH----HHhcCCC
Confidence 766554444443333222211110 01122489999999999999999997 9999998
No 168
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.8e-42 Score=336.28 Aligned_cols=265 Identities=27% Similarity=0.385 Sum_probs=208.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||.|+||+||+|.... ++..+|+|++....... ....+.+|+.+|+.++|+||+++++.+...+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLP-----NNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcC-----CCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCE
Confidence 479999999999999999999876 56789999986543322 45667779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCC-CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 164 SCLVMEYCPGGDLYAARQRQPG-KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.|+||||++|++|.+++..... ..+.... ++.++.||+.||+|||++||+|
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~ql~~al~~lh~~~i~h 125 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAI----------------------------IATVLKEVLKGLEYLHSNGQIH 125 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999999876422 2222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.++|+|||++..+......
T Consensus 126 ~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~----------------------------------------------- 158 (267)
T cd06610 126 RDIKAGNILLGEDGSVKIADFGVSASLADGGDR----------------------------------------------- 158 (267)
T ss_pred CCCCHHhEEEcCCCCEEEcccchHHHhccCccc-----------------------------------------------
Confidence 999999999999999999999998433211000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.........|+..|+|||++... .++.++|+|||||++|+|++|+.||...+
T Consensus 159 ---------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 159 ---------------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred ---------------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 00112334689999999999877 68999999999999999999999999887
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+.++............. .......+.+||.+||..||++||++. ++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~----~ll~~p~~ 267 (267)
T cd06610 212 PMKVLMLTLQNDPPSLETGAD---YKKYSKSFRKMISLCLQKDPSKRPTAE----ELLKHKFF 267 (267)
T ss_pred hhhhHHHHhcCCCCCcCCccc---cccccHHHHHHHHHHcCCChhhCcCHH----HHhhCCCC
Confidence 776666665543221111110 001223589999999999999999987 99999998
No 169
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=368.49 Aligned_cols=272 Identities=29% Similarity=0.379 Sum_probs=209.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeee-
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEF- 158 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~- 158 (517)
+..-+++|.+.|.+|||+.||+|++.. .+..||+|.+-... ...++.+.+|+.+|++|. |+|||.++|..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~-----~~~~~AlKrm~~~d---e~~L~~v~~EI~~MK~L~gh~nIV~yidss~ 105 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVK-----GGKKYALKRMYVND---EEALNAVKREIDIMKLLSGHKNIVSYIDSSA 105 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecC-----CCceeeeeeeecCC---HHHHHHHHHHHHHHHHhcCCCceeeEecccc
Confidence 455678999999999999999999987 34789999875442 456677788999999996 99999999933
Q ss_pred ec------CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH
Q 010140 159 EA------SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL 232 (517)
Q Consensus 159 ~~------~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 232 (517)
.. .-.+.|+||||+||.|.+++..+...++.+.++. +|+.|+++||
T Consensus 106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVL----------------------------kIf~dv~~AV 157 (738)
T KOG1989|consen 106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVL----------------------------KIFYDVCEAV 157 (738)
T ss_pred ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHH----------------------------HHHHHHHHHH
Confidence 21 1357899999999999999987766667666665 7789999999
Q ss_pred HHHHhcC--ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccc
Q 010140 233 EYLHMMG--IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSV 310 (517)
Q Consensus 233 ~yLH~~~--iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (517)
++||... |||||||-|||||+.+|+.||||||.+.-....+... ...
T Consensus 158 a~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~---~e~---------------------------- 206 (738)
T KOG1989|consen 158 AAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSA---QEV---------------------------- 206 (738)
T ss_pred HHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccH---HHH----------------------------
Confidence 9999998 9999999999999999999999999883222111100 000
Q ss_pred ccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhh---cCCCCCccchHHHHHHHH
Q 010140 311 SHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVI---SGQGHGSAVDWWTLGVFL 387 (517)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l---~~~~~~~~~DiWSlGvil 387 (517)
..+ .+ .-...-|+.|+|||++ .+.+.+.|+|||||||+|
T Consensus 207 ---------------------------~~v------e~-----eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL 248 (738)
T KOG1989|consen 207 ---------------------------NYV------EE-----EIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL 248 (738)
T ss_pred ---------------------------HHH------HH-----HHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH
Confidence 000 00 0011368999999998 466789999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhh----cCCC
Q 010140 388 YEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK----RHEF 463 (517)
Q Consensus 388 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell----~hp~ 463 (517)
|-|+....||.+... ..|+.+.+.+|....-. ..+.+||..||+.||++||++.+...++. .+++
T Consensus 249 YkLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys-------~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 249 YKLCYFTTPFEESGK----LAILNGNYSFPPFPNYS-------DRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred HHHHHhCCCcCcCcc----eeEEeccccCCCCccHH-------HHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 999999999987643 45788888888763222 24899999999999999999985443333 4566
Q ss_pred cCCCC
Q 010140 464 FKGIN 468 (517)
Q Consensus 464 f~~~~ 468 (517)
+.++.
T Consensus 318 ~~~~~ 322 (738)
T KOG1989|consen 318 IPDIY 322 (738)
T ss_pred ccccc
Confidence 66554
No 170
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-42 Score=340.19 Aligned_cols=259 Identities=25% Similarity=0.377 Sum_probs=206.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++.+.||.|+||.||+|.+.. +++.||+|.+..... .....+.+|+.+++.++||||+++++++..++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 89 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVA-----TGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGD 89 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcC-----CCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCc
Confidence 3679999999999999999999876 678899999865432 22345677999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|..++... .+++.. +..++.|++.||+|||++|++|
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~---~l~~~~----------------------------~~~i~~~l~~al~~LH~~~i~H 138 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVTET---CMDEAQ----------------------------IAAVCRECLQALEFLHANQVIH 138 (296)
T ss_pred eEEEEEEecCCCcHHHHHHhc---CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999887642 222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.+||+|||++......
T Consensus 139 ~dL~p~Nili~~~~~~kl~dfg~~~~~~~~-------------------------------------------------- 168 (296)
T cd06655 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPE-------------------------------------------------- 168 (296)
T ss_pred CCCCHHHEEECCCCCEEEccCccchhcccc--------------------------------------------------
Confidence 999999999999999999999987432110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 169 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~ 220 (296)
T cd06655 169 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (296)
T ss_pred ----------------------------cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0011223588999999999988899999999999999999999999998877
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
......+............ .....+.+||.+||..||.+||++. +++.||||+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~dp~~Rpt~~----~il~~~~~~~~~ 276 (296)
T cd06655 221 LRALYLIATNGTPELQNPE------KLSPIFRDFLNRCLEMDVEKRGSAK----ELLQHPFLKLAK 276 (296)
T ss_pred HHHHHHHHhcCCcccCCcc------cCCHHHHHHHHHHhhcChhhCCCHH----HHhhChHhhhcc
Confidence 6655555433221111111 1223589999999999999999998 999999998543
No 171
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1e-42 Score=336.80 Aligned_cols=255 Identities=36% Similarity=0.659 Sum_probs=205.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||.|+||.||+|++.. +++.||+|++.+...........+.+|+.++++++||||+++++.+..+...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRD-----TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEcc-----CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeE
Confidence 58999999999999999999876 6788999999876554445567788899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||++|++|..++... ..+..... ..++.||+.||.|||++|++|+|
T Consensus 76 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~----------------------------~~~~~~i~~~l~~lh~~~i~h~d 125 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK--VKFSEEQV----------------------------KFWICEIVLALEYLHSKGIIHRD 125 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc--CCcCHHHH----------------------------HHHHHHHHHHHHHHHhCCeeccC
Confidence 9999999999999988664 22322222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++......
T Consensus 126 l~~~nil~~~~~~~~l~d~~~~~~~~~~---------------------------------------------------- 153 (258)
T cd05578 126 IKPDNILLDEQGHVHITDFNIATKVTPD---------------------------------------------------- 153 (258)
T ss_pred CCHHHeEEcCCCCEEEeecccccccCCC----------------------------------------------------
Confidence 9999999999999999999987432110
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh--
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN-- 402 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~-- 402 (517)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+.
T Consensus 154 ---------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 206 (258)
T cd05578 154 ---------------------------TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI 206 (258)
T ss_pred ---------------------------ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence 001223578899999999988899999999999999999999999997764
Q ss_pred HHHHHHHhc-CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 403 EKTLINILK-KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 403 ~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
...+..... .....|.. . +.++.++|.+||..||.+||++. .+|+++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 207 RDQIRAKQETADVLYPAT---W------STEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred HHHHHHHhccccccCccc---C------cHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 222223222 22222221 1 13589999999999999999992 3399999998
No 172
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=341.00 Aligned_cols=266 Identities=27% Similarity=0.420 Sum_probs=211.3
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC--CCC----cc
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD--HPF----LP 152 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~--Hpn----Iv 152 (517)
+....++|.+.+.+|+|+||.|..|.++. ++..||||+++.- ....+....|+.+|.++. .|+ +|
T Consensus 84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~-----~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv 154 (415)
T KOG0671|consen 84 GDILTNRYEIVDLLGEGTFGKVVECWDRE-----TKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCV 154 (415)
T ss_pred ccccccceehhhhhcCCcccceEEEeecC-----CCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence 44557899999999999999999999987 5789999999643 244455566999999993 333 78
Q ss_pred ceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH
Q 010140 153 TLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL 232 (517)
Q Consensus 153 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 232 (517)
.+.++|+-.++.|+|+|.+ |-++++++..+....+++..+ |.|+.||+.++
T Consensus 155 ~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~i----------------------------r~m~~QL~~sv 205 (415)
T KOG0671|consen 155 QMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHI----------------------------RHMGYQLLESV 205 (415)
T ss_pred eeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHH----------------------------HHHHHHHHHHH
Confidence 8899999999999999999 889999999877777776555 47899999999
Q ss_pred HHHHhcCceeccCCCCceEEcc--------------------CCcEEeccCCCcccccccccccCCcchHHHHhhhcccC
Q 010140 233 EYLHMMGIVYRDLKPENVLVRE--------------------DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCS 292 (517)
Q Consensus 233 ~yLH~~~iiHrDLKp~NILl~~--------------------~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (517)
+|||+.+++|.||||||||+.. +-.|+|+|||.|..-
T Consensus 206 ~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~----------------------- 262 (415)
T KOG0671|consen 206 AFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFD----------------------- 262 (415)
T ss_pred HHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCccee-----------------------
Confidence 9999999999999999999932 235899999987321
Q ss_pred CCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC
Q 010140 293 IPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ 372 (517)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~ 372 (517)
....++++.|..|+|||++.+-
T Consensus 263 ----------------------------------------------------------~e~hs~iVsTRHYRAPEViLgL 284 (415)
T KOG0671|consen 263 ----------------------------------------------------------HEHHSTIVSTRHYRAPEVILGL 284 (415)
T ss_pred ----------------------------------------------------------ccCcceeeeccccCCchheecc
Confidence 1223567899999999999999
Q ss_pred CCCccchHHHHHHHHHHHhhCCCCCCCCChHH---HHHHHhcCC------------------CCCCCCCCCC--------
Q 010140 373 GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK---TLINILKKP------------------LTFPRIGVSS-------- 423 (517)
Q Consensus 373 ~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~---~~~~i~~~~------------------~~~p~~~~~~-------- 423 (517)
+++.++||||+||||+||++|...|.+.++.+ ++++|+... +.+|......
T Consensus 285 GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ 364 (415)
T KOG0671|consen 285 GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEP 364 (415)
T ss_pred CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcC
Confidence 99999999999999999999999999877655 455554311 1111111110
Q ss_pred c--------hhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 424 S--------KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 424 ~--------~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
. ....+..++.|||++||..||.+|+|+. |+|.||||+..
T Consensus 365 ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~----EAL~HpFF~~~ 412 (415)
T KOG0671|consen 365 CKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR----EALSHPFFARL 412 (415)
T ss_pred CccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH----HHhcCHHhhcC
Confidence 0 0013345689999999999999999998 99999999864
No 173
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-42 Score=346.86 Aligned_cols=267 Identities=25% Similarity=0.336 Sum_probs=186.0
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee--cCceeEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE--ASHYSCL 166 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~~l 166 (517)
..+||+|+||.||+|+.+.. .+++.||+|.+..... ...+.+|+.+|+.++||||+++++++. .+..+|+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~---~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l 77 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDG---KDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWL 77 (317)
T ss_pred ceEeccCCCeeEEEEEecCC---CccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEE
Confidence 36899999999999997652 2457899999875421 234556999999999999999999884 4567899
Q ss_pred EEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCC
Q 010140 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLK 246 (517)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 246 (517)
||||+. ++|.+++.......... .........++.++.||+.||.|||++||+|||||
T Consensus 78 v~e~~~-~~l~~~~~~~~~~~~~~---------------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlk 135 (317)
T cd07867 78 LFDYAE-HDLWHIIKFHRASKANK---------------------KPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLK 135 (317)
T ss_pred EEeeeC-CcHHHHHHhhhccccCC---------------------CCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence 999995 58888775432111000 00011222345788999999999999999999999
Q ss_pred CCceEE----ccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 247 PENVLV----REDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 247 p~NILl----~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|+|||+ +.++.+||+|||+++.......
T Consensus 136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------ 167 (317)
T cd07867 136 PANILVMGEGPERGRVKIADMGFARLFNSPLK------------------------------------------------ 167 (317)
T ss_pred HHHEEEccCCCCCCcEEEeeccceeccCCCcc------------------------------------------------
Confidence 999999 4567999999999854321000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.........||+.|+|||++.+. .++.++|||||||++|||++|++||....
T Consensus 168 ---------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 168 ---------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ---------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 00011234689999999999874 47999999999999999999999997543
Q ss_pred hH---------HHHHHHhcCC--------------CCCCCC---------CCCCch------hHHhhhhHHHHHHHhccC
Q 010140 402 NE---------KTLINILKKP--------------LTFPRI---------GVSSSK------EFEEVVKLQDLISKLLVK 443 (517)
Q Consensus 402 ~~---------~~~~~i~~~~--------------~~~p~~---------~~~~~~------~~~~~~~l~dLi~~~L~~ 443 (517)
.. ..+..+.... ..++.. ...... .......+.+||.+||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 300 (317)
T cd07867 221 EDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTM 300 (317)
T ss_pred ccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhcc
Confidence 21 1111111100 000000 000000 001123478999999999
Q ss_pred CcccccCCCCChHHhhcCCCc
Q 010140 444 NPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 444 dP~~R~t~~~~~~ell~hp~f 464 (517)
||.+|||+. |+|+||||
T Consensus 301 dP~~R~t~~----e~l~hp~f 317 (317)
T cd07867 301 DPTKRITSE----QALQDPYF 317 (317)
T ss_pred CcccccCHH----HHhcCCCC
Confidence 999999998 99999998
No 174
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.2e-42 Score=341.80 Aligned_cols=277 Identities=21% Similarity=0.230 Sum_probs=198.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCC-----------CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMV-----------GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP 149 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~-----------~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp 149 (517)
+..++|++.++||+|+||.||+|.+..... ...+..||+|++..... ......+.+|+.+|.+++||
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCC
Confidence 345789999999999999999998754221 11345799999875421 23345677899999999999
Q ss_pred CccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHH
Q 010140 150 FLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETL 229 (517)
Q Consensus 150 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~ 229 (517)
||+++++++.+.+..|+||||+++|+|.+++................ .............+..++.||+
T Consensus 80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~i~ 148 (304)
T cd05096 80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAV-----------PPAHCLPAISYSSLLHVALQIA 148 (304)
T ss_pred CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccccc-----------ccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999986642211111000000 0000001112233457899999
Q ss_pred HHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccc
Q 010140 230 LALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSS 309 (517)
Q Consensus 230 ~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (517)
.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 149 ~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~----------------------------------- 193 (304)
T cd05096 149 SGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY----------------------------------- 193 (304)
T ss_pred HHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce-----------------------------------
Confidence 999999999999999999999999999999999999843221000
Q ss_pred cccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHH
Q 010140 310 VSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYE 389 (517)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~e 389 (517)
........++..|+|||++.+..++.++|||||||++||
T Consensus 194 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 232 (304)
T cd05096 194 -----------------------------------------YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWE 232 (304)
T ss_pred -----------------------------------------eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence 001122346788999999998889999999999999999
Q ss_pred Hhh--CCCCCCCCChHHHHHHHhc---CC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 390 MLY--GTTPFKGENNEKTLINILK---KP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 390 llt--G~~Pf~~~~~~~~~~~i~~---~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
|++ +..||.+.+..+.+..+.. .. ...+.... ..+..+.+||.+||..||++||++.
T Consensus 233 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~RPs~~ 296 (304)
T cd05096 233 ILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPP------PCPQGLYELMLQCWSRDCRERPSFS 296 (304)
T ss_pred HHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCC------CCCHHHHHHHHHHccCCchhCcCHH
Confidence 986 6788887766655444322 11 01111111 1123589999999999999999997
No 175
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.9e-42 Score=333.05 Aligned_cols=256 Identities=26% Similarity=0.457 Sum_probs=207.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+++... .++.||+|.+....... .....+.+|+.+++.++||||+++++++...++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKE-----DGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcC-----CCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeE
Confidence 58999999999999999999876 57889999987543221 2335667799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++++|.+++.......++.... ..++.||+.||.|||++|++|+|
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~l~~~l~~lh~~~i~h~~ 126 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRGVLFPEDQI----------------------------LDWFVQICLALKHVHDRKILHRD 126 (256)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCEecCC
Confidence 99999999999999887543222322222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|+|+|||++.++.++|+|||++.......
T Consensus 127 l~~~nil~~~~~~~~l~d~~~~~~~~~~~--------------------------------------------------- 155 (256)
T cd08218 127 IKSQNIFLTKDGTIKLGDFGIARVLNSTV--------------------------------------------------- 155 (256)
T ss_pred CCHHHEEEcCCCCEEEeeccceeecCcch---------------------------------------------------
Confidence 99999999999999999999884322100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 156 ---------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08218 156 ---------------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN 208 (256)
T ss_pred ---------------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence 00112357889999999998889999999999999999999999999888777
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+..+..... ... ...++.++|.+||+.+|.+||++. ++++||||
T Consensus 209 ~~~~~~~~~~~~~--~~~------~~~~~~~li~~~l~~~p~~Rp~~~----~vl~~~~~ 256 (256)
T cd08218 209 LVLKIIRGSYPPV--SSH------YSYDLRNLVSQLFKRNPRDRPSVN----SILEKNFI 256 (256)
T ss_pred HHHHHhcCCCCCC--ccc------CCHHHHHHHHHHhhCChhhCcCHH----HHhhCcCC
Confidence 7777765543211 111 122589999999999999999998 99999998
No 176
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.3e-42 Score=334.98 Aligned_cols=253 Identities=19% Similarity=0.207 Sum_probs=197.4
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++.+.||+|+||.||+|.++... ..+..||+|.++.... ......+.+|+.++++++||||+++++++..+
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 78 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPS--KRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRG 78 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCC--CceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC
Confidence 4567999999999999999999876421 1457899999875422 12345677899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||+++|+|.+++.... ..+++.. ++.++.||+.||+|||++|++
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~----------------------------~~~~~~~i~~al~~lH~~~ii 129 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-GQLVAGQ----------------------------LMGMLPGLASGMKYLSEMGYV 129 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEe
Confidence 99999999999999999887542 1222222 237789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.++++|||.+.......
T Consensus 130 H~dikp~nili~~~~~~~l~dfg~~~~~~~~~------------------------------------------------ 161 (266)
T cd05064 130 HKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA------------------------------------------------ 161 (266)
T ss_pred eccccHhhEEEcCCCcEEECCCcccccccccc------------------------------------------------
Confidence 99999999999999999999999863211000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 162 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 162 -----------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred -----------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 000112235678999999999889999999999999999775 99999988
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+..+....+..+.. .+.. .. .+..+.+++.+||+.+|.+||++.
T Consensus 213 ~~~~~~~~~~~~~~-~~~~-~~------~~~~~~~li~~c~~~~p~~RP~~~ 256 (266)
T cd05064 213 SGQDVIKAVEDGFR-LPAP-RN------CPNLLHQLMLDCWQKERGERPRFS 256 (266)
T ss_pred CHHHHHHHHHCCCC-CCCC-CC------CCHHHHHHHHHHcCCCchhCCCHH
Confidence 87777666654422 2211 11 122489999999999999999997
No 177
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.7e-42 Score=331.63 Aligned_cols=256 Identities=29% Similarity=0.441 Sum_probs=208.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++++.||.|+||.||.++... +++.+++|.+....... ....++.+|+.++++++|+||+++++++.+.+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTE-----DDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcC-----CCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeE
Confidence 58999999999999999999876 67889999876543221 3345567799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
++|||||++|+|.+++.......++.... ..++.|++.||.|||+.|++|||
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~~l~~~l~~lh~~~i~h~d 126 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQKGQLFEEEMV----------------------------LWYLFQIVSAVSYIHKAGILHRD 126 (256)
T ss_pred EEEEEecCCCcHHHHHHhccccCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCccccC
Confidence 99999999999999987653333333222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.+||+|||++.......
T Consensus 127 l~p~ni~~~~~~~~kl~d~~~~~~~~~~~--------------------------------------------------- 155 (256)
T cd08221 127 IKTLNIFLTKAGLIKLGDFGISKILGSEY--------------------------------------------------- 155 (256)
T ss_pred CChHhEEEeCCCCEEECcCcceEEccccc---------------------------------------------------
Confidence 99999999999999999999974322100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||......+
T Consensus 156 ---------------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08221 156 ---------------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN 208 (256)
T ss_pred ---------------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 01123468999999999998888999999999999999999999999888888
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+..+...... . ....++.++|.+||..||.+||++. ++++|||+
T Consensus 209 ~~~~~~~~~~~~~~--~------~~~~~~~~~i~~~l~~~p~~R~s~~----~ll~~~~l 256 (256)
T cd08221 209 LVVKIVQGNYTPVV--S------VYSSELISLVHSLLQQDPEKRPTAD----EVLDQPLL 256 (256)
T ss_pred HHHHHHcCCCCCCc--c------ccCHHHHHHHHHHcccCcccCCCHH----HHhhCcCC
Confidence 77777765433221 1 1123589999999999999999998 99999996
No 178
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.5e-42 Score=337.32 Aligned_cols=259 Identities=27% Similarity=0.385 Sum_probs=200.4
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA 160 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~ 160 (517)
..++|.+.+.||+|+||.||+|.... +++.+|+|++..... ....+..|+.++.++ +||||+++++++..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~-----~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKK-----DGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECC-----CCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45789999999999999999999876 678899999865321 223455688899988 89999999999864
Q ss_pred C-----ceeEEEEEecCCCchhHHHHhCCC--CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHH
Q 010140 161 S-----HYSCLVMEYCPGGDLYAARQRQPG--KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALE 233 (517)
Q Consensus 161 ~-----~~~~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 233 (517)
. +..|+||||++||+|.+++..... ..+.+. .++.++.|++.||+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~----------------------------~~~~~~~qi~~al~ 142 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEA----------------------------MISYILYGALLGLQ 142 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHH----------------------------HHHHHHHHHHHHHH
Confidence 3 468999999999999998764321 122221 22467899999999
Q ss_pred HHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 234 YLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 234 yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 182 (291)
T cd06639 143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------------------------------- 182 (291)
T ss_pred HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc----------------------------------------
Confidence 9999999999999999999999999999999974322100
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-----CCccchHHHHHHHHH
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-----HGSAVDWWTLGVFLY 388 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-----~~~~~DiWSlGvil~ 388 (517)
.......|+..|+|||++.... ++.++|||||||++|
T Consensus 183 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~ 224 (291)
T cd06639 183 --------------------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI 224 (291)
T ss_pred --------------------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHH
Confidence 0011235888999999986532 678999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 389 EMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 389 elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
+|++|++||........+..+............ .....+.+||.+||+.||++||++. |+++||||+
T Consensus 225 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rps~~----~il~~~~~~ 291 (291)
T cd06639 225 ELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPE------KWCRSFNHFISQCLIKDFEARPSVT----HLLEHPFIK 291 (291)
T ss_pred HHhhCCCCCCCCcHHHHHHHHhcCCCCCCCccc------ccCHHHHHHHHHHhhcChhhCcCHH----HHhcCcccC
Confidence 999999999887766666665544321111110 1122489999999999999999998 999999995
No 179
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.2e-42 Score=332.52 Aligned_cols=255 Identities=29% Similarity=0.449 Sum_probs=204.0
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+.+. +++.|++|.+..... ...+.+|+.+++.++||||+++++++..+.
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~ 71 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKE-----TGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNT 71 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcC-----CCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence 3689999999999999999999886 568899999976532 456777999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|++|||+++++|.+++.... ..++.. .++.++.||+.||.|||+.||+|
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~~-~~l~~~----------------------------~~~~~~~~l~~~l~~lh~~~i~H 122 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKITN-KTLTEE----------------------------EIAAILYQTLKGLEYLHSNKKIH 122 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhCc-cCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999886532 222222 22367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||+|+||+++.++.++|+|||++......
T Consensus 123 ~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~-------------------------------------------------- 152 (256)
T cd06612 123 RDIKAGNILLNEEGQAKLADFGVSGQLTDT-------------------------------------------------- 152 (256)
T ss_pred CCCCcceEEECCCCcEEEcccccchhcccC--------------------------------------------------
Confidence 999999999999999999999998432210
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........|+..|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 153 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~ 204 (256)
T cd06612 153 ----------------------------MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP 204 (256)
T ss_pred ----------------------------ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch
Confidence 0011223578899999999988899999999999999999999999987766
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
......+............ .....+.++|.+||+.||++||++. |++.||||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~l~~~P~~Rps~~----~il~~~~~ 256 (256)
T cd06612 205 MRAIFMIPNKPPPTLSDPE------KWSPEFNDFVKKCLVKDPEERPSAI----QLLQHPFI 256 (256)
T ss_pred hhhhhhhccCCCCCCCchh------hcCHHHHHHHHHHHhcChhhCcCHH----HHhcCCCC
Confidence 5544443332111111000 1123589999999999999999998 99999997
No 180
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-44 Score=350.20 Aligned_cols=263 Identities=32% Similarity=0.459 Sum_probs=218.9
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
.+.||+|.||+||-|+++. +++.||||++.+..... ++..++..|+.||..++||.||.|...|+..+.+++||
T Consensus 569 devLGSGQFG~VYgg~hRk-----tGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRK-----TGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HhhccCCcceeeecceecc-----cCceeeeeeeecccCCC-chHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 4689999999999999998 78999999998776543 33467788999999999999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
|-+ .||+.+.+......++++...+ +++.||+.||.|||-+||+|+|||||
T Consensus 643 EKl-~GDMLEMILSsEkgRL~er~Tk----------------------------FlvtQIL~ALr~LH~knIvHCDLKPE 693 (888)
T KOG4236|consen 643 EKL-HGDMLEMILSSEKGRLPERITK----------------------------FLVTQILVALRYLHFKNIVHCDLKPE 693 (888)
T ss_pred hhh-cchHHHHHHHhhcccchHHHHH----------------------------HHHHHHHHHHHHhhhcceeeccCCch
Confidence 999 6677777766555666554444 56799999999999999999999999
Q ss_pred ceEEccCC---cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 249 NVLVREDG---HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 249 NILl~~~~---~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
|||+.... ++||||||+|+.+..
T Consensus 694 NVLLas~~~FPQvKlCDFGfARiIgE------------------------------------------------------ 719 (888)
T KOG4236|consen 694 NVLLASASPFPQVKLCDFGFARIIGE------------------------------------------------------ 719 (888)
T ss_pred heeeccCCCCCceeeccccceeecch------------------------------------------------------
Confidence 99997543 799999999976542
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~ 405 (517)
..-..+.+|||.|+|||+++.+.|+..-|+||+|||+|--+.|..||.... ++
T Consensus 720 -------------------------ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dI 772 (888)
T KOG4236|consen 720 -------------------------KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DI 772 (888)
T ss_pred -------------------------hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--ch
Confidence 112356789999999999999999999999999999999999999997543 44
Q ss_pred HHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC-CcccccCCC
Q 010140 406 LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI-NWALIRSIK 476 (517)
Q Consensus 406 ~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~-~~~~~~~~~ 476 (517)
-.+|......+|...+. +....+.|||..+|+..-.+|.+.. +.|.|||+++- -|..++..+
T Consensus 773 ndQIQNAaFMyPp~PW~-----eis~~AidlIn~LLqVkm~kRysvd----k~lsh~Wlq~yq~w~DLRelE 835 (888)
T KOG4236|consen 773 NDQIQNAAFMYPPNPWS-----EISPEAIDLINNLLQVKMRKRYSVD----KSLSHPWLQDYQTWLDLRELE 835 (888)
T ss_pred hHHhhccccccCCCchh-----hcCHHHHHHHHHHHHHHHHHhcchH----hhccchhhhcchHHHHHHHHH
Confidence 45666666777765443 3445689999999999999999998 99999999974 577776543
No 181
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=353.70 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=214.0
Q ss_pred HHhhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccc
Q 010140 74 LRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPT 153 (517)
Q Consensus 74 ~~~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~ 153 (517)
+..+.|++.-++..+.++||+|+||.||+|+.+...... ...||+|..+.+....+.....+..|.++|+.++|||||+
T Consensus 147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~-~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFK-VVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred ccccccEEeccCccccceeecccccEEEEEEEEecCCce-eeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 445667777888899999999999999999988643211 1228999998644455677888999999999999999999
Q ss_pred eeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHH
Q 010140 154 LYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALE 233 (517)
Q Consensus 154 l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 233 (517)
+||+......+|||||+|+||+|.++|++.+. .++..+. ..++.+.+.||+
T Consensus 226 ~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek----------------------------~~~~~~AA~Gl~ 276 (474)
T KOG0194|consen 226 FYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEK----------------------------LRFCYDAARGLE 276 (474)
T ss_pred EEEEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHH----------------------------HHHHHHHHhHHH
Confidence 99999999999999999999999999998753 2333222 257889999999
Q ss_pred HHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 234 YLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 234 yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
|||++++|||||..+|+|++.++.+||+|||+++.......
T Consensus 277 YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~--------------------------------------- 317 (474)
T KOG0194|consen 277 YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM--------------------------------------- 317 (474)
T ss_pred HHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceee---------------------------------------
Confidence 99999999999999999999999999999999843220000
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY- 392 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt- 392 (517)
......-...|+|||.+....|+.++|||||||++||+++
T Consensus 318 ---------------------------------------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~ 358 (474)
T KOG0194|consen 318 ---------------------------------------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFEN 358 (474)
T ss_pred ---------------------------------------ccccccCcceecChhhhccCccccccchhheeeeEEeeecc
Confidence 0000123468999999999899999999999999999998
Q ss_pred CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 393 GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 393 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
|..||.+....++..+|.......+.... .+..+..++.+||..||++||++.
T Consensus 359 g~~Py~g~~~~~v~~kI~~~~~r~~~~~~-------~p~~~~~~~~~c~~~~p~~R~tm~ 411 (474)
T KOG0194|consen 359 GAEPYPGMKNYEVKAKIVKNGYRMPIPSK-------TPKELAKVMKQCWKKDPEDRPTMS 411 (474)
T ss_pred CCCCCCCCCHHHHHHHHHhcCccCCCCCC-------CHHHHHHHHHHhccCChhhccCHH
Confidence 89999999999999999665554443331 123588999999999999999996
No 182
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.4e-42 Score=336.40 Aligned_cols=269 Identities=41% Similarity=0.728 Sum_probs=207.9
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-HHHHhHHHHHHHHHHhc-CCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 162 (517)
+|++.+.||+|+||.||+|++..... .++.||||++.+..... .....++..|+.++..+ +||||+++++.+..+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHD--AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEecccc--CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC
Confidence 48899999999999999998764322 46789999997654322 23445677899999999 6999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++|+|.+++... ..+... .++.++.|++.||.|||+.|++|
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~----------------------------~~~~~~~ql~~~l~~lH~~~~~H 128 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQR--EHFTES----------------------------EVRVYIAEIVLALDHLHQLGIIY 128 (288)
T ss_pred EEEEEEecCCCCcHHHHHhhc--CCcCHH----------------------------HHHHHHHHHHHHHHHHHHCCeec
Confidence 999999999999999887643 122222 22467889999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.++|+|||+++......
T Consensus 129 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------------- 159 (288)
T cd05583 129 RDIKLENILLDSEGHVVLTDFGLSKEFLAEE------------------------------------------------- 159 (288)
T ss_pred cCCCHHHeEECCCCCEEEEECcccccccccc-------------------------------------------------
Confidence 9999999999999999999999874322100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC--CCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~--~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
........|+..|+|||.+.+.. .+.++||||||+++|+|++|..||...
T Consensus 160 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 211 (288)
T cd05583 160 ----------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD 211 (288)
T ss_pred ----------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccC
Confidence 00112345889999999987764 688999999999999999999999643
Q ss_pred Ch----HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc
Q 010140 401 NN----EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 401 ~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~ 472 (517)
.. .+....+.......+.. ....+.++|.+||+.||++|||+ ..+.++|+||||+.++|+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~~p~~R~t~-~~~~~~l~~~~~~~~~~~~~ 277 (288)
T cd05583 212 GEQNSQSEISRRILKSKPPFPKT---------MSAEARDFIQKLLEKDPKKRLGA-NGADEIKNHPFFQGIDWDDL 277 (288)
T ss_pred cccchHHHHHHHHHccCCCCCcc---------cCHHHHHHHHHHhcCCHhhccCc-chHHHHhcCcccccCCHHHH
Confidence 32 23333333333222221 11248999999999999999997 45668999999999999866
No 183
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.8e-42 Score=336.80 Aligned_cols=258 Identities=29% Similarity=0.488 Sum_probs=208.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||.|+||.||+|++.. ++..||+|++..... ......+.+|+.+++.++||||+++++++.++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKR-----TNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSK 73 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECC-----CCeEEEEEEeecccc--chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCe
Confidence 468999999999999999999876 678899999875431 2334556779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+|+|+||+++++|.+++... .++... ++.++.||+.||.|||+++++||
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~---~~~~~~----------------------------~~~~~~ql~~~l~~lh~~~i~h~ 122 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG---KLDETY----------------------------IAFILREVLLGLEYLHEEGKIHR 122 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999988653 222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+||+++.++.++|+|||+++......
T Consensus 123 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------- 152 (274)
T cd06609 123 DIKAANILLSEEGDVKLADFGVSGQLTSTM-------------------------------------------------- 152 (274)
T ss_pred CCCHHHEEECCCCCEEEcccccceeecccc--------------------------------------------------
Confidence 999999999999999999999985432100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||...+..
T Consensus 153 ----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~ 204 (274)
T cd06609 153 ----------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM 204 (274)
T ss_pred ----------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH
Confidence 0112346888999999999888999999999999999999999999887766
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
.....+.......... . ....++.++|.+||..||++||++. ++++||||....
T Consensus 205 ~~~~~~~~~~~~~~~~--~-----~~~~~~~~~l~~~l~~~p~~Rpt~~----~il~~~~~~~~~ 258 (274)
T cd06609 205 RVLFLIPKNNPPSLEG--N-----KFSKPFKDFVSLCLNKDPKERPSAK----ELLKHKFIKKAK 258 (274)
T ss_pred HHHHHhhhcCCCCCcc--c-----ccCHHHHHHHHHHhhCChhhCcCHH----HHhhChhhcCCC
Confidence 6555554432211111 1 0122489999999999999999998 999999998754
No 184
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-42 Score=336.87 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=199.7
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++++.||+|+||.||+|++.. +++.||+|++..... .....+.+|+.+++.++||||+++++++..+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~ 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLH-----TGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSR 78 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECC-----CCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence 34689999999999999999999876 578899999864421 2233566799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||+++++|.+++... ..++... +..++.|++.||+|||++||+
T Consensus 79 ~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~----------------------------~~~~~~qi~~~l~~lH~~~i~ 128 (267)
T cd06646 79 EKLWICMEYCGGGSLQDIYHVT--GPLSELQ----------------------------IAYVCRETLQGLAYLHSKGKM 128 (267)
T ss_pred CEEEEEEeCCCCCcHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999988653 2222222 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.+||+|||+++.+...
T Consensus 129 H~dl~p~nill~~~~~~~l~dfg~~~~~~~~------------------------------------------------- 159 (267)
T cd06646 129 HRDIKGANILLTDNGDVKLADFGVAAKITAT------------------------------------------------- 159 (267)
T ss_pred ccCCCHHHEEECCCCCEEECcCccceeeccc-------------------------------------------------
Confidence 9999999999999999999999998432210
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC---CCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~---~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........|++.|+|||.+.+ ..++.++||||+||++|||++|..||.
T Consensus 160 -----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~ 210 (267)
T cd06646 160 -----------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred -----------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 001123468899999999853 347889999999999999999999997
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
..........+.......+..... ......+.+||.+||..||++||+++ ++++|+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rp~~~----~il~~l~ 267 (267)
T cd06646 211 DLHPMRALFLMSKSNFQPPKLKDK----TKWSSTFHNFVKISLTKNPKKRPTAE----RLLTHLF 267 (267)
T ss_pred ccchhhhheeeecCCCCCCCCccc----cccCHHHHHHHHHHhhCChhhCcCHH----HHhcCCC
Confidence 665444333333332222211110 01223589999999999999999998 9999987
No 185
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5e-42 Score=335.63 Aligned_cols=271 Identities=21% Similarity=0.242 Sum_probs=204.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||+|+||.||+|.++.......+..||+|++...... .....+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 455789999999999999999998865333335678999998643211 223456779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
+...++||||+++|+|.+++............ ........+..++.|++.||+|||++|+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 140 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------------------QAPPSLKKMIQMAGEIADGMAYLNANKF 140 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCcccccccc--------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999998654211000000 0011122334678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.++|+|||+++.+.....
T Consensus 141 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 174 (277)
T cd05062 141 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY---------------------------------------------- 174 (277)
T ss_pred ccCCcchheEEEcCCCCEEECCCCCccccCCcce----------------------------------------------
Confidence 9999999999999999999999999843321000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 175 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~ 224 (277)
T cd05062 175 ------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 224 (277)
T ss_pred ------------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 000011246788999999998889999999999999999998 7999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
....+....+......... .. ....+.+||.+||+.||++||++. |++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~~l~~~p~~Rps~~----e~l~~ 274 (277)
T cd05062 225 MSNEQVLRFVMEGGLLDKP--DN------CPDMLFELMRMCWQYNPKMRPSFL----EIISS 274 (277)
T ss_pred CCHHHHHHHHHcCCcCCCC--CC------CCHHHHHHHHHHcCCChhhCcCHH----HHHHH
Confidence 8877776666554332211 11 122489999999999999999997 76653
No 186
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.1e-42 Score=342.68 Aligned_cols=269 Identities=28% Similarity=0.347 Sum_probs=202.6
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++.+.||+|+||.||+|.++. +++.||+|++...... ........+|+.++++++|+||+++++++...
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTT-----SGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECC-----CCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 46789999999999999999999886 6788999998644211 11122345699999999999999999998754
Q ss_pred --ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
+.+|+||||+. ++|.+++.... ..+... .++.++.||+.||+|||++|
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~l~~~----------------------------~~~~~~~qi~~~l~~lH~~~ 128 (309)
T cd07845 79 HLDSIFLVMEYCE-QDLASLLDNMP-TPFSES----------------------------QVKCLMLQLLRGLQYLHENF 128 (309)
T ss_pred CCCeEEEEEecCC-CCHHHHHHhcc-cCCCHH----------------------------HHHHHHHHHHHHHHHHHhCC
Confidence 56899999995 58888776532 222222 22367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
++||||||+||+++.++.+||+|||++.......
T Consensus 129 i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---------------------------------------------- 162 (309)
T cd07845 129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---------------------------------------------- 162 (309)
T ss_pred eecCCCCHHHEEECCCCCEEECccceeeecCCcc----------------------------------------------
Confidence 9999999999999999999999999984322100
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.......+++.|+|||++.+. .++.++|||||||++|+|++|.+||.
T Consensus 163 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 163 --------------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred --------------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 001122457889999998764 47999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCC-------------------CCCCCCCCc-hhH-HhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 399 GENNEKTLINILKKPLT-------------------FPRIGVSSS-KEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~-------------------~p~~~~~~~-~~~-~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
+.+..+.+..+...... .+....... ..+ .....+.+||.+||+.||++||++. |
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~----~ 286 (309)
T cd07845 211 GKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE----E 286 (309)
T ss_pred CCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH----H
Confidence 88887776666542110 000000000 000 1234688999999999999999998 9
Q ss_pred hhcCCCcCCCC
Q 010140 458 IKRHEFFKGIN 468 (517)
Q Consensus 458 ll~hp~f~~~~ 468 (517)
+++||||++..
T Consensus 287 il~h~~f~~~~ 297 (309)
T cd07845 287 ALESSYFKEKP 297 (309)
T ss_pred HhcChhhccCC
Confidence 99999998544
No 187
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-42 Score=340.37 Aligned_cols=258 Identities=27% Similarity=0.388 Sum_probs=200.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++++.||+|+||.||+|++.. +++.||+|.+..... ......+.+|+.++++++||||+++++.+..++.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 73 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRP-----TGVTMAMKEIRLELD--ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGA 73 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcC-----CCcEEEEEEeecccC--HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCe
Confidence 478999999999999999999876 678899998864321 2234567779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCC-CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-cCce
Q 010140 164 SCLVMEYCPGGDLYAARQRQPG-KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-MGIV 241 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~~ii 241 (517)
.|+||||++|++|..++..... ..+.+. .++.++.||+.||.|||+ .||+
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~----------------------------~~~~~~~~i~~~l~~LH~~~~i~ 125 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPED----------------------------VLRRITYAVVKGLKFLKEEHNII 125 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHH----------------------------HHHHHHHHHHHHHHHHHhcCCEe
Confidence 9999999999999888765311 122222 224778999999999997 5999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.+||+|||++.....
T Consensus 126 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------------------------------------- 155 (286)
T cd06622 126 HRDVKPTNVLVNGNGQVKLCDFGVSGNLVA-------------------------------------------------- 155 (286)
T ss_pred eCCCCHHHEEECCCCCEEEeecCCcccccC--------------------------------------------------
Confidence 999999999999999999999998733210
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC------CCCccchHHHHHHHHHHHhhCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ------GHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~------~~~~~~DiWSlGvil~elltG~~ 395 (517)
.......|++.|+|||.+.+. .++.++|||||||++|+|++|..
T Consensus 156 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~ 205 (286)
T cd06622 156 ------------------------------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY 205 (286)
T ss_pred ------------------------------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCC
Confidence 011223588899999998654 35789999999999999999999
Q ss_pred CCCCCChHHHHHH---HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 396 PFKGENNEKTLIN---ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 396 Pf~~~~~~~~~~~---i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
||........... +..... +..... ...++.+||.+||+.+|++||++. +++.||||....
T Consensus 206 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~----~l~~~~~~~~~~ 269 (286)
T cd06622 206 PYPPETYANIFAQLSAIVDGDP--PTLPSG------YSDDAQDFVAKCLNKIPNRRPTYA----QLLEHPWLVKYK 269 (286)
T ss_pred CCCCcchhhHHHHHHHHhhcCC--CCCCcc------cCHHHHHHHHHHcccCcccCCCHH----HHhcChhhhhcc
Confidence 9987655443332 222221 111111 223589999999999999999998 999999997643
No 188
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.6e-42 Score=336.74 Aligned_cols=260 Identities=25% Similarity=0.374 Sum_probs=197.1
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeee-
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE- 159 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~- 159 (517)
..++|++.+.||+|+||.||+|++.. .++.+|+|++..... ....+..|+.+++.+ +||||+++++++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKK-----NGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECC-----CCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45789999999999999999999876 567899999864321 123455689999999 7999999999873
Q ss_pred ----cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 160 ----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 160 ----~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
.++..|+||||++|++|.+++...........+ ..++.++.|++.||.||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~--------------------------~~~~~~~~~i~~~l~~l 140 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEE--------------------------PIIAYILHEALMGLQHL 140 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccH--------------------------HHHHHHHHHHHHHHHHH
Confidence 456799999999999999887643211111111 11236789999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 141 H~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------------------------------------------- 177 (286)
T cd06638 141 HVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST------------------------------------------- 177 (286)
T ss_pred HhCCccccCCCHHhEEECCCCCEEEccCCceeecccC-------------------------------------------
Confidence 9999999999999999999999999999998432210
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-----CCCCccchHHHHHHHHHHH
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEM 390 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-----~~~~~~~DiWSlGvil~el 390 (517)
........|++.|+|||++.. ..++.++|||||||++|||
T Consensus 178 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el 222 (286)
T cd06638 178 -----------------------------------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIEL 222 (286)
T ss_pred -----------------------------------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHH
Confidence 001122358999999999853 3478899999999999999
Q ss_pred hhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 391 LYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 391 ltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
++|+.||........+..+...... ....+. ....++.+||.+||+.||++||++. |+++|+||
T Consensus 223 ~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~----ell~~~~~ 286 (286)
T cd06638 223 GDGDPPLADLHPMRALFKIPRNPPP--TLHQPE----LWSNEFNDFIRKCLTKDYEKRPTVS----DLLQHVFI 286 (286)
T ss_pred hcCCCCCCCCchhHHHhhccccCCC--cccCCC----CcCHHHHHHHHHHccCCcccCCCHH----HHhhcccC
Confidence 9999999877665544443332111 111110 0112489999999999999999998 99999997
No 189
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3e-42 Score=353.08 Aligned_cols=289 Identities=22% Similarity=0.251 Sum_probs=202.6
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~ 157 (517)
+.+..++|+++++||+|+||.||+|++...........||||++..... ....+.+.+|+.+|+++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR--SSEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 4456789999999999999999999986533323456799999975422 133456778999999996 9999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccC---ccchhhh-------------hhhhhhhh-----------------
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFG---ISSAKFV-------------FFLLFFFF----------------- 204 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~---~~~~~~~-------------~~~l~~~~----------------- 204 (517)
+...+..|||||||++|+|.+++......... ....... .+...-+.
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 99999999999999999999998754211000 0000000 00000000
Q ss_pred -------------hcCC--------------------ccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 205 -------------YNNL--------------------GFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 205 -------------~~~~--------------------~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
.... ............+..++.||+.||+|||++||+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 0000 0000011233445679999999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.+||+|||+++.......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~--------------------------------------------------------- 292 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN--------------------------------------------------------- 292 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc---------------------------------------------------------
Confidence 99999999999999843221000
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHh
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINIL 410 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~ 410 (517)
........+++.|+|||++.+..++.++|||||||++|||++ |..||........+....
T Consensus 293 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~ 353 (400)
T cd05105 293 -------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI 353 (400)
T ss_pred -------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence 001122357788999999998889999999999999999997 999998765544444333
Q ss_pred cCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 411 ~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
......+... ....++.+||.+||+.||++||++.
T Consensus 354 ~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~RPt~~ 388 (400)
T cd05105 354 KSGYRMAKPD-------HATQEVYDIMVKCWNSEPEKRPSFL 388 (400)
T ss_pred hcCCCCCCCc-------cCCHHHHHHHHHHCccCHhHCcCHH
Confidence 3332222111 1123589999999999999999986
No 190
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.3e-42 Score=330.49 Aligned_cols=255 Identities=26% Similarity=0.406 Sum_probs=205.6
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+...... ......+..|+.+|+.++||||+++++.+..++..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKA-----DQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcC-----CCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEE
Confidence 58999999999999999999876 6788999998754332 23346677899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
++||||+++++|.+++.......++... +..++.|++.||+|||++||+|||
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~l~~lh~~~i~h~d 126 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCNSLLDEDT----------------------------ILHFFVQILLALHHVHTKLILHRD 126 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeecCC
Confidence 9999999999999998764322233222 236789999999999999999999
Q ss_pred CCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 245 LKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 245 LKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
|||+||+++.+ +.+||+|||++......
T Consensus 127 l~~~nil~~~~~~~~~l~d~~~~~~~~~~--------------------------------------------------- 155 (256)
T cd08220 127 LKTQNILLDKHKMVVKIGDFGISKILSSK--------------------------------------------------- 155 (256)
T ss_pred CCHHHEEEcCCCCEEEEccCCCceecCCC---------------------------------------------------
Confidence 99999999855 46899999998432210
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 156 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 207 (256)
T cd08220 156 ----------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP 207 (256)
T ss_pred ----------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH
Confidence 0111235888999999999888899999999999999999999999988777
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.....+........ ... ...++.++|.+||..||.+|||+. |+++||||
T Consensus 208 ~~~~~~~~~~~~~~--~~~------~~~~l~~li~~~l~~~p~~Rpt~~----~ll~~p~~ 256 (256)
T cd08220 208 ALVLKIMSGTFAPI--SDR------YSPDLRQLILSMLNLDPSKRPQLS----QIMAQPIC 256 (256)
T ss_pred HHHHHHHhcCCCCC--CCC------cCHHHHHHHHHHccCChhhCCCHH----HHhhCCCC
Confidence 76666655432211 111 122489999999999999999998 99999997
No 191
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2e-42 Score=347.93 Aligned_cols=294 Identities=18% Similarity=0.208 Sum_probs=204.8
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
|.+..++|++.+.||+|+||.||+|...+.....+++.||+|++..... ......+..|+.++.++ +||||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 4556678999999999999999999876543333568899999864321 12345566799999999 89999999998
Q ss_pred ee-cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhh--------------------------hhh-h---hhhhc
Q 010140 158 FE-ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVF--------------------------FLL-F---FFFYN 206 (517)
Q Consensus 158 ~~-~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~--------------------------~~l-~---~~~~~ 206 (517)
+. .+..++++|||+++|+|.+++................. +.. . .....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 75 45678999999999999999865432111000000000 000 0 00000
Q ss_pred CC-ccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHH
Q 010140 207 NL-GFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAI 285 (517)
Q Consensus 207 ~~-~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~ 285 (517)
.. ............+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----------- 228 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 228 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----------
Confidence 00 000011233445678999999999999999999999999999999999999999999854321100
Q ss_pred hhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCccc
Q 010140 286 EKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLA 365 (517)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~A 365 (517)
........++..|+|
T Consensus 229 -----------------------------------------------------------------~~~~~~~~~~~~y~a 243 (337)
T cd05054 229 -----------------------------------------------------------------YVRKGDARLPLKWMA 243 (337)
T ss_pred -----------------------------------------------------------------hhhccCCCCCccccC
Confidence 001122346778999
Q ss_pred chhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCC
Q 010140 366 PEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKN 444 (517)
Q Consensus 366 PE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~d 444 (517)
||++.+..++.++|||||||++|||++ |..||.+....+.+............ ... ...++.+++.+||+.+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~l~~~cl~~~ 316 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA-PEY------ATPEIYSIMLDCWHNN 316 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC-Ccc------CCHHHHHHHHHHccCC
Confidence 999999999999999999999999997 99999876554444444333222111 111 1235899999999999
Q ss_pred cccccCCCCChHHhhcC
Q 010140 445 PKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 445 P~~R~t~~~~~~ell~h 461 (517)
|++||++. |+++|
T Consensus 317 p~~RPs~~----ell~~ 329 (337)
T cd05054 317 PEDRPTFS----ELVEI 329 (337)
T ss_pred hhhCcCHH----HHHHH
Confidence 99999997 77664
No 192
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.1e-43 Score=327.16 Aligned_cols=278 Identities=26% Similarity=0.325 Sum_probs=204.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec-C
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-S 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~ 161 (517)
+..|++++.||+|+||.||+|..+++... -.+.||||.++.+... .......-+|+.+++.++||||+.|..+|-. +
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~k-r~k~yAiKkfk~~kd~-tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDK-RTKEYAIKKFKGEKDG-TGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcc-cchhhHHHHHhccCCC-CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 35799999999999999999976653221 2458999998755211 1112334469999999999999999999976 8
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
..++|++||++. ||.+.|+.+...... ......++.++.||+.|+.|||++-|+
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~-------------------------~lp~~mvKsilwQil~Gv~YLH~NWvl 154 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAK-------------------------QLPRSMVKSILWQILDGVHYLHSNWVL 154 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhc-------------------------cCCHHHHHHHHHHHHhhhHHHhhhhee
Confidence 899999999965 999988765432211 122334567889999999999999999
Q ss_pred eccCCCCceEEccC----CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 242 YRDLKPENVLVRED----GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 242 HrDLKp~NILl~~~----~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||||||.|||+..+ |+|||+|||+++.+...-..+
T Consensus 155 HRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl----------------------------------------- 193 (438)
T KOG0666|consen 155 HRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPL----------------------------------------- 193 (438)
T ss_pred eccCCcceEEEeccCCccCeeEeecccHHHHhhcccccc-----------------------------------------
Confidence 99999999999877 899999999997765321110
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~P 396 (517)
.....++-|.+|+|||.+.|.. |+.+.||||.|||+.||++-++.
T Consensus 194 ----------------------------------~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~Pl 239 (438)
T KOG0666|consen 194 ----------------------------------ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPL 239 (438)
T ss_pred ----------------------------------ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcc
Confidence 0123356799999999999976 89999999999999999999999
Q ss_pred CCCCCh---------HHHHHHHhcCCC-----CCCCCCCCC------------------chhH----H-hhhhHHHHHHH
Q 010140 397 FKGENN---------EKTLINILKKPL-----TFPRIGVSS------------------SKEF----E-EVVKLQDLISK 439 (517)
Q Consensus 397 f~~~~~---------~~~~~~i~~~~~-----~~p~~~~~~------------------~~~~----~-~~~~l~dLi~~ 439 (517)
|.+... .+.+.+|.+-.. .+|...... ...+ . ..+...+|+.+
T Consensus 240 F~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~k 319 (438)
T KOG0666|consen 240 FKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQK 319 (438)
T ss_pred ccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHH
Confidence 986432 234445543111 111110000 0000 0 11236799999
Q ss_pred hccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 440 LLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 440 ~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
||+.||.+|+|++ ++++|+||..-
T Consensus 320 lL~yDP~kRIta~----qAleh~yF~~d 343 (438)
T KOG0666|consen 320 LLTYDPIKRITAE----QALEHPYFTED 343 (438)
T ss_pred HhccCchhhccHH----HHhcccccccC
Confidence 9999999999998 99999999854
No 193
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.5e-42 Score=340.42 Aligned_cols=262 Identities=25% Similarity=0.383 Sum_probs=195.4
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+|+++. +++.||+|.+...... ......+.+|+.+++.++||||+++++++.+....
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~-----~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRE-----THEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECC-----CCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCce
Confidence 48999999999999999999886 6788999998654211 12234556699999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||++ ++|.+++.... ..+++.. ++.++.||+.||.|||++||+|||
T Consensus 75 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~----------------------------~~~~~~qi~~al~~LH~~~i~H~d 124 (284)
T cd07839 75 TLVFEYCD-QDLKKYFDSCN-GDIDPEI----------------------------VKSFMFQLLKGLAFCHSHNVLHRD 124 (284)
T ss_pred EEEEecCC-CCHHHHHHhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEecCC
Confidence 99999995 58887776532 2233222 236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.+||+|||+++......
T Consensus 125 l~~~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 153 (284)
T cd07839 125 LKPQNLLINKNGELKLADFGLARAFGIPV--------------------------------------------------- 153 (284)
T ss_pred CCHHHEEEcCCCcEEECccchhhccCCCC---------------------------------------------------
Confidence 99999999999999999999984321100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCC-CCCCh
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPF-KGENN 402 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf-~~~~~ 402 (517)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+.
T Consensus 154 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~ 206 (284)
T cd07839 154 ---------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 206 (284)
T ss_pred ---------------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH
Confidence 0011235788999999987754 789999999999999999998885 44444
Q ss_pred HHHHHHHhcCCC-----------------CCCCCCCCCc---hhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 403 EKTLINILKKPL-----------------TFPRIGVSSS---KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 403 ~~~~~~i~~~~~-----------------~~p~~~~~~~---~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
.+.+..+..... .++....... .......++++||.+||+.||.+|||++ ++++||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~----~il~h~ 282 (284)
T cd07839 207 DDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAE----EALQHP 282 (284)
T ss_pred HHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHH----HHhcCC
Confidence 444443322100 0000000000 0001234688999999999999999998 999999
Q ss_pred Cc
Q 010140 463 FF 464 (517)
Q Consensus 463 ~f 464 (517)
||
T Consensus 283 ~f 284 (284)
T cd07839 283 YF 284 (284)
T ss_pred CC
Confidence 98
No 194
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=302.57 Aligned_cols=265 Identities=25% Similarity=0.381 Sum_probs=208.1
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|.-.++||+|.||+||+|+.++ +.+.||+|.++-+... +..-....+|+-+|+.++|.|||+++++...+..+
T Consensus 3 ~ydkmekigegtygtvfkarn~~-----t~eivalkrvrldddd-egvpssalreicllkelkhknivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRE-----THEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCC-----ccceEEEEEEeccCCC-CCCcHHHHHHHHHHHHhhhcceeehhhhhccCcee
Confidence 56677899999999999999987 7889999998754321 12234556799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
-||+||| ..+|..+.....+. +.. ..+|.++.|+++||.|+|++++.|||
T Consensus 77 tlvfe~c-dqdlkkyfdslng~-~d~----------------------------~~~rsfmlqllrgl~fchshnvlhrd 126 (292)
T KOG0662|consen 77 TLVFEFC-DQDLKKYFDSLNGD-LDP----------------------------EIVRSFMLQLLRGLGFCHSHNVLHRD 126 (292)
T ss_pred EEeHHHh-hHHHHHHHHhcCCc-CCH----------------------------HHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 9999999 66998888765321 111 12357789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||.|+||+.+|.+||+|||+++.+...-.
T Consensus 127 lkpqnllin~ngelkladfglarafgipvr-------------------------------------------------- 156 (292)
T KOG0662|consen 127 LKPQNLLINRNGELKLADFGLARAFGIPVR-------------------------------------------------- 156 (292)
T ss_pred CCcceEEeccCCcEEecccchhhhcCCceE--------------------------------------------------
Confidence 999999999999999999999966542111
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhh-CCCCCCCCCh
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLY-GTTPFKGENN 402 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~ellt-G~~Pf~~~~~ 402 (517)
....-+-|.+|++|.++.|.. |++..|+||.|||+.|+.. |++.|.+.+.
T Consensus 157 ----------------------------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv 208 (292)
T KOG0662|consen 157 ----------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_pred ----------------------------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH
Confidence 112235789999999999977 8999999999999999984 8899999999
Q ss_pred HHHHHHHhcCCC-----CCCCCCC-----------CCchhHHhh----hhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 403 EKTLINILKKPL-----TFPRIGV-----------SSSKEFEEV----VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 403 ~~~~~~i~~~~~-----~~p~~~~-----------~~~~~~~~~----~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
.+.+.+|..... .+|.... ......... ..-+||++++|.-+|..|++++ ++++||
T Consensus 209 ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisae----aalqhp 284 (292)
T KOG0662|consen 209 DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAE----AALQHP 284 (292)
T ss_pred HHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHH----HHhcCc
Confidence 888888864211 1111100 000111111 2357999999999999999998 999999
Q ss_pred CcCCC
Q 010140 463 FFKGI 467 (517)
Q Consensus 463 ~f~~~ 467 (517)
||.+.
T Consensus 285 yf~d~ 289 (292)
T KOG0662|consen 285 YFSDF 289 (292)
T ss_pred ccccc
Confidence 99864
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.7e-42 Score=330.95 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=202.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||++++.. +++.||+|.++.... ....+.+..|+.+++.++||||+++++.+..++.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVN-----SDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcC-----CCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence 58999999999999999999876 678899999864321 12345666799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++|+|.+++.......++.... ..++.||+.||.|||++||+|+|
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~i~~al~~lH~~~i~H~d 125 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTI----------------------------LQWFVQMCLGVQHIHEKRVLHRD 125 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHH----------------------------HHHHHHHHHHHHHHhhCCcccCC
Confidence 99999999999999886543333333222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++.......
T Consensus 126 l~p~nili~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 154 (255)
T cd08219 126 IKSKNIFLTQNGKVKLGDFGSARLLTSPG--------------------------------------------------- 154 (255)
T ss_pred CCcceEEECCCCcEEEcccCcceeecccc---------------------------------------------------
Confidence 99999999999999999999874322100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+...
T Consensus 155 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 207 (255)
T cd08219 155 ---------------------------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN 207 (255)
T ss_pred ---------------------------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH
Confidence 01123468899999999998889999999999999999999999999887777
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
....+..+....... . ....+.+||.+||+.||++||++. +++.
T Consensus 208 ~~~~~~~~~~~~~~~--~------~~~~~~~li~~~l~~~P~~Rp~~~----~il~ 251 (255)
T cd08219 208 LILKVCQGSYKPLPS--H------YSYELRSLIKQMFKRNPRSRPSAT----TILS 251 (255)
T ss_pred HHHHHhcCCCCCCCc--c------cCHHHHHHHHHHHhCCcccCCCHH----HHhh
Confidence 766666544322111 1 112489999999999999999997 7765
No 196
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.6e-42 Score=330.72 Aligned_cols=258 Identities=30% Similarity=0.460 Sum_probs=206.0
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||.|+||.||+|.+.. +++.+|+|++...... ....+.+|+.+++.++||||+++++++.+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 73 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIA-----TGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRD 73 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecC-----CCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCC
Confidence 3689999999999999999999876 5678999998755322 3456677999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|++|||+++++|.+++.... ..+.... +..++.|++.||+|||++||+|
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~~-~~l~~~~----------------------------~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVTR-GPLSELQ----------------------------IAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhhc-cCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCcee
Confidence 9999999999999999876531 1222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||||+||+++.++.+||+|||++......
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-------------------------------------------------- 154 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTAT-------------------------------------------------- 154 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhh--------------------------------------------------
Confidence 999999999999999999999987432110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---CCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
........|+..|+|||.+.+. .++.++|||||||++|+|++|.+||.+
T Consensus 155 ----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~ 206 (262)
T cd06613 155 ----------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFD 206 (262)
T ss_pred ----------------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 0011234688899999999876 788999999999999999999999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
.+.......+.......+.... ......++.+||.+||..||.+||++. +++.|+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~----~il~~~~ 262 (262)
T cd06613 207 LHPMRALFLISKSNFPPPKLKD----KEKWSPVFHDFIKKCLTKDPKKRPTAT----KLLQHPF 262 (262)
T ss_pred CCHHHHHHHHHhccCCCccccc----hhhhhHHHHHHHHHHcCCChhhCCCHH----HHhcCCC
Confidence 7766655555444322221111 112234589999999999999999998 9999998
No 197
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.4e-42 Score=337.11 Aligned_cols=273 Identities=22% Similarity=0.252 Sum_probs=207.3
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|.+.+.||+|+||.||+|++........++.||||++...... .....+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN--DARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH--HHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 34679999999999999999998865432235688999998754221 2345677899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
...|+||||++|++|.+++............ ............+..++.||+.||.|||++|++
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~----------------~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~ 144 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKS----------------PDSPMGELTLSQLLQIAVQIASGMVYLASQHFV 144 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcc----------------cccccccccHHHHHHHHHHHHHHHHHHhhCCee
Confidence 9999999999999999999765321100000 000011122333457889999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.+||+|||+++.......
T Consensus 145 h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~----------------------------------------------- 177 (280)
T cd05049 145 HRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY----------------------------------------------- 177 (280)
T ss_pred ccccccceEEEcCCCeEEECCcccceecccCcc-----------------------------------------------
Confidence 999999999999999999999999843211000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus 178 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~ 228 (280)
T cd05049 178 -----------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228 (280)
T ss_pred -----------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 000112246788999999999899999999999999999998 99999988
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+..+....+..+....+... .+..+.+||.+||+.||++||++. |+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~li~~~l~~~p~~Rp~~~----eil~ 276 (280)
T cd05049 229 SNEEVIECITQGRLLQRPRT--------CPSEVYDIMLGCWKRDPQQRINIK----DIHE 276 (280)
T ss_pred CHHHHHHHHHcCCcCCCCCC--------CCHHHHHHHHHHcCCCcccCCCHH----HHHH
Confidence 88777777765544332211 122589999999999999999997 6653
No 198
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=7.6e-42 Score=332.33 Aligned_cols=260 Identities=27% Similarity=0.413 Sum_probs=200.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH--HHHHHHhHHHHHHHHHHhcCCCCccceeeeeec-
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA- 160 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~- 160 (517)
.+|++.+.||+|+||.||+|.+.. +++.||+|.+..... ........+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVD-----TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcC-----CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence 468999999999999999999876 678899998864321 122345567789999999999999999998865
Q ss_pred -CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
+..++++|||+++++|.+++.... .+.... .+.++.||+.||+|||+++
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~----------------------------~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKAYG--ALTESV----------------------------TRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCC
Confidence 467899999999999999886532 222211 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.+||+|||+++.......
T Consensus 127 i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 161 (266)
T cd06651 127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM--------------------------------------------- 161 (266)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCCCccccccccc---------------------------------------------
Confidence 99999999999999999999999999843321000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.........|+..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 162 ------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 162 ------------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred ------------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 00001223588899999999988899999999999999999999999987
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
.........+..... .+.... .....+++|| +||..+|++||++. |+++||||+
T Consensus 212 ~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~li-~~~~~~p~~Rp~~~----eil~hp~~~ 265 (266)
T cd06651 212 YEAMAAIFKIATQPT-NPQLPS------HISEHARDFL-GCIFVEARHRPSAE----ELLRHPFAQ 265 (266)
T ss_pred cchHHHHHHHhcCCC-CCCCch------hcCHHHHHHH-HHhcCChhhCcCHH----HHhcCcccc
Confidence 766555554443221 111111 1122478888 57778999999998 999999996
No 199
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.7e-42 Score=337.10 Aligned_cols=263 Identities=26% Similarity=0.386 Sum_probs=199.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|+++. +++.||+|++...... ....+.+..|+.+++.++||||+++++++.....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRE-----TGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECC-----CCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCE
Confidence 479999999999999999999876 6788999998644211 1122445679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++++.|..++... ..++... ++.++.||+.||+|||++||+||
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~--~~~~~~~----------------------------~~~~~~ql~~~l~~LH~~~i~H~ 124 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNP--RGVPEHL----------------------------IKKIIWQTLQAVNFCHKHNCIHR 124 (286)
T ss_pred EEEEEeccCccHHHHHHhCC--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCceec
Confidence 99999999998887765432 1232222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||++.......
T Consensus 125 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 154 (286)
T cd07847 125 DVKPENILITKQGQIKLCDFGFARILTGPG-------------------------------------------------- 154 (286)
T ss_pred CCChhhEEEcCCCcEEECccccceecCCCc--------------------------------------------------
Confidence 999999999999999999999984322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......++..|+|||++.+. .++.++|||||||++|+|++|..||.+...
T Consensus 155 ----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~ 206 (286)
T cd07847 155 ----------------------------DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD 206 (286)
T ss_pred ----------------------------ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 011223578899999998764 478999999999999999999999998776
Q ss_pred HHHHHHHhcCC-------------------CCCCCCCCCCchh---HHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 403 EKTLINILKKP-------------------LTFPRIGVSSSKE---FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 403 ~~~~~~i~~~~-------------------~~~p~~~~~~~~~---~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.+....+.... ...+......... ......+.+||.+||+.||++||++. |++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~----eil~ 282 (286)
T cd07847 207 VDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCE----ELLE 282 (286)
T ss_pred HHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHH----HHhc
Confidence 55544432210 0011110000000 01234588999999999999999998 9999
Q ss_pred CCCc
Q 010140 461 HEFF 464 (517)
Q Consensus 461 hp~f 464 (517)
||||
T Consensus 283 ~~~f 286 (286)
T cd07847 283 HPYF 286 (286)
T ss_pred CCCC
Confidence 9998
No 200
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.1e-41 Score=330.86 Aligned_cols=260 Identities=28% Similarity=0.420 Sum_probs=201.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH--HHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec-
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA- 160 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~- 160 (517)
.+|++.+.||+|+||.||+|.+.. +++.||||.+.... .........+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~-----~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDAD-----TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcC-----CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence 579999999999999999999876 67899999875321 1112345677789999999999999999999876
Q ss_pred -CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
...+|+||||++|++|.+++.... .+.... ...++.||+.||+|||++|
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~----------------------------~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENV----------------------------TRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred CCceEEEEEEecCCCcHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCC
Confidence 357899999999999999886542 222221 1367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+|+||||+|||++.++.++|+|||+++.......
T Consensus 127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~--------------------------------------------- 161 (265)
T cd06652 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL--------------------------------------------- 161 (265)
T ss_pred EecCCCCHHHEEecCCCCEEECcCccccccccccc---------------------------------------------
Confidence 99999999999999999999999998843211000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 162 ------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 162 ------------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred ------------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 00011233588999999999988899999999999999999999999987
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
........++...... +.... .....+.++|.+||. +|++||+++ |+++|||+.
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~i~~~l~-~p~~Rp~~~----~il~~~~~~ 265 (265)
T cd06652 212 FEAMAAIFKIATQPTN-PVLPP------HVSDHCRDFLKRIFV-EAKLRPSAD----ELLRHTFVH 265 (265)
T ss_pred cchHHHHHHHhcCCCC-CCCch------hhCHHHHHHHHHHhc-ChhhCCCHH----HHhcCcccC
Confidence 7665555554433211 11111 122358899999995 999999997 999999984
No 201
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.6e-42 Score=338.83 Aligned_cols=263 Identities=27% Similarity=0.383 Sum_probs=200.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++++.||.|+||.||+|+++. +++.||||.+...... ......+..|+.++++++||||+++++++.+++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKL-----TGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECC-----CCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcE
Confidence 48999999999999999999876 6788999998654221 12234567799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+. ++|..++.......+..... +.++.||+.||+|||++|++|||
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~l~~~~~----------------------------~~~~~~i~~~l~~lh~~~i~H~~ 125 (284)
T cd07860 75 YLVFEFLH-QDLKKFMDASPLSGIPLPLI----------------------------KSYLFQLLQGLAFCHSHRVLHRD 125 (284)
T ss_pred EEEeeccc-cCHHHHHHhCCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeecCC
Confidence 99999995 68988876654333333222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|+|+||+++.++.+||+|||++......
T Consensus 126 l~p~nill~~~~~~~l~dfg~~~~~~~~---------------------------------------------------- 153 (284)
T cd07860 126 LKPQNLLINTEGAIKLADFGLARAFGVP---------------------------------------------------- 153 (284)
T ss_pred CCHHHEEECCCCCEEEeeccchhhcccC----------------------------------------------------
Confidence 9999999999999999999987432110
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
........+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..
T Consensus 154 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~ 207 (284)
T cd07860 154 --------------------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 207 (284)
T ss_pred --------------------------ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 00011224688999999987754 688999999999999999999999887766
Q ss_pred HHHHHHhcCCCC------------------CCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 404 KTLINILKKPLT------------------FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 404 ~~~~~i~~~~~~------------------~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
....++...... ++......... .....++++||.+||+.||.+||++. ++++|||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~~l~~~~ 283 (284)
T cd07860 208 DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK----AALAHPF 283 (284)
T ss_pred HHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH----HHhcCCC
Confidence 555444331111 11100000000 01224578999999999999999998 9999999
Q ss_pred c
Q 010140 464 F 464 (517)
Q Consensus 464 f 464 (517)
|
T Consensus 284 f 284 (284)
T cd07860 284 F 284 (284)
T ss_pred C
Confidence 8
No 202
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.4e-42 Score=370.15 Aligned_cols=280 Identities=22% Similarity=0.259 Sum_probs=200.7
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|+++++||+|+||.||+|++.. +++.||||++..+.........++.+|+.+++.++||||+++++++.+++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~-----tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPV-----CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD 75 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECC-----CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC
Confidence 3689999999999999999999876 67889999997653333344567788999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCC-ccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGK-RFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
..|+||||++||+|.+++...... .+.... ........+..++.||+.||+|||++||+
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~--------------------~~~lsv~~iL~I~~QIa~AL~yLHs~GII 135 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKEL--------------------AEKTSVGAFLSIFHKICATIEYVHSKGVL 135 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhh--------------------hcccCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 999999999999999988653211 111000 00111122346789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.+|.+||+|||+++............ +
T Consensus 136 HRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l----------------~------------------------- 174 (932)
T PRK13184 136 HRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDI----------------D------------------------- 174 (932)
T ss_pred ccCCchheEEEcCCCCEEEEecCcceeccccccccccc----------------c-------------------------
Confidence 99999999999999999999999986542111000000 0
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.... .............+||+.|||||++.+..++.++|||||||++|||++|..||....
T Consensus 175 ------~~~~-------------~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~ 235 (932)
T PRK13184 175 ------VDER-------------NICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK 235 (932)
T ss_pred ------cccc-------------cccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence 0000 000000111234579999999999999999999999999999999999999998765
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
.......... ..|....+ ....+..+.+++.+||+.||++|++..+
T Consensus 236 ~~ki~~~~~i---~~P~~~~p---~~~iP~~L~~LI~rcL~~DP~kR~ss~e 281 (932)
T PRK13184 236 GRKISYRDVI---LSPIEVAP---YREIPPFLSQIAMKALAVDPAERYSSVQ 281 (932)
T ss_pred hhhhhhhhhc---cChhhccc---cccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 4433222111 11111000 0112235899999999999999998763
No 203
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6e-42 Score=333.95 Aligned_cols=257 Identities=30% Similarity=0.452 Sum_probs=200.7
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecC
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEAS 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~ 161 (517)
.++|++.+.||+|+||.||+|.++. +++.+++|++..... ....+..|+.+++++ +||||+++++++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKK-----TGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECC-----CCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 4789999999999999999999876 567899999876532 234567799999998 799999999999654
Q ss_pred ------ceeEEEEEecCCCchhHHHHhCC--CCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHH
Q 010140 162 ------HYSCLVMEYCPGGDLYAARQRQP--GKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALE 233 (517)
Q Consensus 162 ------~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 233 (517)
..+|+||||+++++|.+++.... ...+.... ++.++.||+.||.
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~----------------------------~~~~~~ql~~al~ 127 (275)
T cd06608 76 NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW----------------------------IAYILRETLRGLA 127 (275)
T ss_pred CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHH----------------------------HHHHHHHHHHHHH
Confidence 45899999999999998876532 22222222 2367899999999
Q ss_pred HHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 234 YLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 234 yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 128 ~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~----------------------------------------- 166 (275)
T cd06608 128 YLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDST----------------------------------------- 166 (275)
T ss_pred HHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccc-----------------------------------------
Confidence 999999999999999999999999999999987432110
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-----CCCccchHHHHHHHHH
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-----GHGSAVDWWTLGVFLY 388 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-----~~~~~~DiWSlGvil~ 388 (517)
........|++.|+|||++... .++.++|||||||++|
T Consensus 167 -------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 167 -------------------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred -------------------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 0011234589999999998642 3678999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 389 EMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 389 elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
+|++|..||...........+........ . ... .....+++||.+||..||++||++. ++++|||+
T Consensus 210 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~--~~~--~~~~~~~~li~~~l~~dp~~Rpt~~----~ll~~~~~ 275 (275)
T cd06608 210 ELADGKPPLCDMHPMRALFKIPRNPPPTL--K--SPE--NWSKKFNDFISECLIKNYEQRPFME----ELLEHPFI 275 (275)
T ss_pred HHHhCCCCccccchHHHHHHhhccCCCCC--C--chh--hcCHHHHHHHHHHhhcChhhCcCHH----HHhcCCCC
Confidence 99999999987766666655554432111 1 000 1223589999999999999999998 99999996
No 204
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.2e-42 Score=337.91 Aligned_cols=263 Identities=29% Similarity=0.419 Sum_probs=196.0
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|++.+.||+|+||.||+|+++. +++.||||.+...... .....+.+|+.+++.++||||+++++++.+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 76 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKL-----TGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKK 76 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcC-----CCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCC
Confidence 4789999999999999999999875 5688999998654211 12234556999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+. ++|.+++..... .+.... ++.++.||+.||.|||++||+|
T Consensus 77 ~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~----------------------------~~~~~~ql~~al~~lH~~~i~H 126 (291)
T cd07844 77 TLTLVFEYLD-TDLKQYMDDCGG-GLSMHN----------------------------VRLFLFQLLRGLAYCHQRRVLH 126 (291)
T ss_pred eEEEEEecCC-CCHHHHHHhCCC-CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeec
Confidence 9999999996 599888765432 222222 2467889999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++......
T Consensus 127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 157 (291)
T cd07844 127 RDLKPQNLLISERGELKLADFGLARAKSVPS------------------------------------------------- 157 (291)
T ss_pred ccCCHHHEEEcCCCCEEECccccccccCCCC-------------------------------------------------
Confidence 9999999999999999999999873211000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......++..|+|||++.+. .++.++||||+||++|+|++|..||.+..
T Consensus 158 -----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 158 -----------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred -----------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 001112467889999998764 48899999999999999999999998765
Q ss_pred -hHHHHHHHhcCCCC-------------------CCCCCCCC----chhHHhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 402 -NEKTLINILKKPLT-------------------FPRIGVSS----SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 402 -~~~~~~~i~~~~~~-------------------~p~~~~~~----~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
..+.+..+...... .+...... ........++.++|.+||+.||++||++. |
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~----e 284 (291)
T cd07844 209 DVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAA----E 284 (291)
T ss_pred cHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHH----H
Confidence 22332222210000 00000000 00001114578999999999999999998 9
Q ss_pred hhcCCCc
Q 010140 458 IKRHEFF 464 (517)
Q Consensus 458 ll~hp~f 464 (517)
+++||||
T Consensus 285 ~l~~~~f 291 (291)
T cd07844 285 AMKHPYF 291 (291)
T ss_pred HhcCCCC
Confidence 9999998
No 205
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.3e-42 Score=347.47 Aligned_cols=262 Identities=27% Similarity=0.386 Sum_probs=198.5
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
.++|++.+.||+|+||.||+|++.. +++.||||++.+.... ......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTV-----TGQNVAIKKLSRPFQN-VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECC-----CCCEEEEEecCccccC-hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence 4789999999999999999999886 6788999998643211 12334556799999999999999999988643
Q ss_pred -----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
...|+||||+. ++|.+.+... +.... ++.++.||+.||+|||
T Consensus 89 ~~~~~~~~~lv~e~~~-~~l~~~~~~~----l~~~~----------------------------~~~~~~ql~~aL~~LH 135 (353)
T cd07850 89 SLEEFQDVYLVMELMD-ANLCQVIQMD----LDHER----------------------------MSYLLYQMLCGIKHLH 135 (353)
T ss_pred CccccCcEEEEEeccC-CCHHHHHhhc----CCHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 35799999994 5887776532 22221 2367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-------------------------------------------- 171 (353)
T cd07850 136 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------------------------------------------- 171 (353)
T ss_pred hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC--------------------------------------------
Confidence 999999999999999999999999999998432110
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus 172 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~p 216 (353)
T cd07850 172 -----------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVL 216 (353)
T ss_pred -----------------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCC
Confidence 001223588999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCCCCC-------------------------------CCCCCCch---hHHhhhhHHHHHHHhcc
Q 010140 397 FKGENNEKTLINILKKPLTFP-------------------------------RIGVSSSK---EFEEVVKLQDLISKLLV 442 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p-------------------------------~~~~~~~~---~~~~~~~l~dLi~~~L~ 442 (517)
|...+....+.++.......+ ........ .-.....+++||.+||+
T Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 296 (353)
T cd07850 217 FPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLV 296 (353)
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcC
Confidence 988766554444432110000 00000000 00123357899999999
Q ss_pred CCcccccCCCCChHHhhcCCCcCC
Q 010140 443 KNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 443 ~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
.||++||++. |+|.||||+.
T Consensus 297 ~dP~~R~t~~----eiL~~~~~~~ 316 (353)
T cd07850 297 IDPEKRISVD----DALQHPYINV 316 (353)
T ss_pred CChhhCcCHH----HHhcChhHhh
Confidence 9999999998 9999999983
No 206
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.6e-42 Score=332.36 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=200.7
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH---HHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA---LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
+|+..+.||+|+||.||+|++.. +++.||+|++.... .........+..|+.++++++||||+++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVK-----TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcC-----CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC
Confidence 47888999999999999999876 67889999986432 12223456778899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..++||||++|++|.+++.... .+.+.. +..++.||+.||.|||++|++
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~----------------------------~~~~~~ql~~al~~LH~~~i~ 125 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAV----------------------------IINYTEQLLRGLSYLHENQII 125 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999886532 222222 236789999999999999999
Q ss_pred eccCCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 242 HrDLKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
||||||+||+++.++ .+||+|||++........
T Consensus 126 H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 159 (268)
T cd06630 126 HRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT---------------------------------------------- 159 (268)
T ss_pred cCCCCHHHEEEcCCCCEEEEcccccccccccccc----------------------------------------------
Confidence 999999999998776 599999999744321100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
..........|+..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 160 ----------------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 211 (268)
T cd06630 160 ----------------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE 211 (268)
T ss_pred ----------------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 0000112346889999999999888999999999999999999999999765
Q ss_pred ChHHHHHHH---hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcC
Q 010140 401 NNEKTLINI---LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 401 ~~~~~~~~i---~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
........+ ...... +.... ....++.++|.+||..||.+||++. ++++||||+
T Consensus 212 ~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~i~~~l~~~p~~R~~~~----~ll~~~~~~ 268 (268)
T cd06630 212 KHSNHLALIFKIASATTA-PSIPE------HLSPGLRDVTLRCLELQPEDRPPSR----ELLKHPVFR 268 (268)
T ss_pred CCcchHHHHHHHhccCCC-CCCch------hhCHHHHHHHHHHcCCCcccCcCHH----HHhcCcccC
Confidence 433222222 211111 11111 1223589999999999999999998 999999985
No 207
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.4e-42 Score=338.97 Aligned_cols=266 Identities=27% Similarity=0.342 Sum_probs=203.1
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH--HHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--IRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+|.+++.||+|+||.||+|.+.. +++.||||.+...... .......+..|+.+++.++|+||+++++++.+.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKE-----TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECC-----CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC
Confidence 48899999999999999999876 5788999999765432 1122344566999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+ +|+|.+++.... ..+.... +..++.||+.||.|||++||+|
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~----------------------------~~~~~~qi~~al~~lH~~~i~H 125 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-IVLTPAD----------------------------IKSYMLMTLRGLEYLHSNWILH 125 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeee
Confidence 999999999 999999886542 1222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.++|+|||+++......
T Consensus 126 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~------------------------------------------------- 156 (298)
T cd07841 126 RDLKPNNLLIASDGVLKLADFGLARSFGSPN------------------------------------------------- 156 (298)
T ss_pred cCCChhhEEEcCCCCEEEccceeeeeccCCC-------------------------------------------------
Confidence 9999999999999999999999984432100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......+++.|+|||.+.+. .++.++|||||||++|+|++|.+||.+..
T Consensus 157 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~ 207 (298)
T cd07841 157 -----------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS 207 (298)
T ss_pred -----------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence 011122468889999998653 47899999999999999999999998877
Q ss_pred hHHHHHHHhcCCCCC-----CC------C------CCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 402 NEKTLINILKKPLTF-----PR------I------GVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~-----p~------~------~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
..+.+.++....... +. . ...... .......+.+||.+||..||++||++. |++.||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~----e~l~~~ 283 (298)
T cd07841 208 DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITAR----QALEHP 283 (298)
T ss_pred cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHH----HHhhCc
Confidence 766555554311000 00 0 000000 011234688999999999999999998 999999
Q ss_pred CcCCC
Q 010140 463 FFKGI 467 (517)
Q Consensus 463 ~f~~~ 467 (517)
||++.
T Consensus 284 ~~~~~ 288 (298)
T cd07841 284 YFSND 288 (298)
T ss_pred cccCC
Confidence 99874
No 208
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=313.62 Aligned_cols=260 Identities=24% Similarity=0.341 Sum_probs=204.5
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 159 (517)
..+++.+++..||.|+.|+||+++.+. ++...|||.+.+..- ....+++.+.+.++.+. +.|+||+.+|+|.
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs-----~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRS-----TGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcc-----cceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 445778889999999999999999997 788999999986643 34556777788877766 4999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc-
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM- 238 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~- 238 (517)
.+..+++.||.| +.-+..++.+-. +.+++... -++...++.||.||.++
T Consensus 162 ~n~dV~IcMelM-s~C~ekLlkrik-~piPE~il----------------------------Gk~tva~v~AL~YLKeKH 211 (391)
T KOG0983|consen 162 TNTDVFICMELM-STCAEKLLKRIK-GPIPERIL----------------------------GKMTVAIVKALYYLKEKH 211 (391)
T ss_pred eCchHHHHHHHH-HHHHHHHHHHhc-CCchHHhh----------------------------hhhHHHHHHHHHHHHHhc
Confidence 999999999998 444555554432 22332211 25678899999999865
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||||||+||+|||+|+.|++||||||++-++....
T Consensus 212 ~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--------------------------------------------- 246 (391)
T KOG0983|consen 212 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--------------------------------------------- 246 (391)
T ss_pred ceeecccCccceEEccCCCEEeecccccceeeccc---------------------------------------------
Confidence 89999999999999999999999999984332110
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---CCCccchHHHHHHHHHHHhhCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~~~~~~DiWSlGvil~elltG~~ 395 (517)
-.+.-.|-+.|||||.+.-. .|+..+||||||++++||+||..
T Consensus 247 ----------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~y 292 (391)
T KOG0983|consen 247 ----------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQY 292 (391)
T ss_pred ----------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccC
Confidence 11223689999999999754 48999999999999999999999
Q ss_pred CCCCC-ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 396 PFKGE-NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 396 Pf~~~-~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
||.+. .+.+++.+++...++..+.... .++++++|+..||.+|+.+||... +||+|||+..
T Consensus 293 Py~~c~tdFe~ltkvln~ePP~L~~~~g------FSp~F~~fv~~CL~kd~r~RP~Y~----~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 293 PYKGCKTDFEVLTKVLNEEPPLLPGHMG------FSPDFQSFVKDCLTKDHRKRPKYN----KLLEHPFIKR 354 (391)
T ss_pred CCCCCCccHHHHHHHHhcCCCCCCcccC------cCHHHHHHHHHHhhcCcccCcchH----HHhcCcceee
Confidence 99985 5678888888755433222222 233589999999999999999998 9999999874
No 209
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.4e-42 Score=339.60 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=202.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
+.|.....||+|+||.||++.+.. ++..||||.+..... .....+.+|+.+++.++||||+++++.+..++.
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~ 93 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKH-----TGKQVAVKKMDLRKQ---QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDE 93 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECC-----CCCEEEEEEEecchH---HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCe
Confidence 345556789999999999998876 578899999865432 234556779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+++++|.+++... .+.... +..++.||+.||+|||++||+||
T Consensus 94 ~~lv~e~~~~~~L~~~~~~~---~l~~~~----------------------------~~~~~~qi~~~l~~LH~~~ivH~ 142 (292)
T cd06658 94 LWVVMEFLEGGALTDIVTHT---RMNEEQ----------------------------IATVCLSVLRALSYLHNQGVIHR 142 (292)
T ss_pred EEEEEeCCCCCcHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEeec
Confidence 99999999999999887542 222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||++......
T Consensus 143 dlkp~Nill~~~~~~kL~dfg~~~~~~~~--------------------------------------------------- 171 (292)
T cd06658 143 DIKSDSILLTSDGRIKLSDFGFCAQVSKE--------------------------------------------------- 171 (292)
T ss_pred CCCHHHEEEcCCCCEEEccCcchhhcccc---------------------------------------------------
Confidence 99999999999999999999987322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
........|++.|+|||.+.+..++.++|||||||++|||++|..||.+....
T Consensus 172 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 224 (292)
T cd06658 172 ---------------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL 224 (292)
T ss_pred ---------------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00112345889999999998888999999999999999999999999987776
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
..+..+............ .....+.++|.+||..||.+|||+. |+++||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~P~~Rpt~~----~il~~~~~~~~ 278 (292)
T cd06658 225 QAMRRIRDNLPPRVKDSH------KVSSVLRGFLDLMLVREPSQRATAQ----ELLQHPFLKLA 278 (292)
T ss_pred HHHHHHHhcCCCcccccc------ccCHHHHHHHHHHccCChhHCcCHH----HHhhChhhhcc
Confidence 655554432211111111 1122489999999999999999998 99999999853
No 210
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-41 Score=329.45 Aligned_cols=250 Identities=20% Similarity=0.262 Sum_probs=198.2
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+...+|.+.+.||+|+||.||+|.++. .++.||+|++..+.. ....+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 73 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEec-----CCceEEEEEecCCch----HHHHHHHHHHHHHhCCCCChhheEEEEcC
Confidence 455679999999999999999999886 578899999875532 23456679999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
+..+++||||+++++|.+++.......++... ++.++.|++.||+|||++|+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~----------------------------~~~~~~ql~~~l~~lH~~~i 125 (263)
T cd05052 74 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----------------------------LLYMATQISSAMEYLEKKNF 125 (263)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCE
Confidence 99999999999999999988664322232222 23678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||++.......
T Consensus 126 ~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~----------------------------------------------- 158 (263)
T cd05052 126 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----------------------------------------------- 158 (263)
T ss_pred eecccCcceEEEcCCCcEEeCCCccccccccce-----------------------------------------------
Confidence 999999999999999999999999984322100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 159 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 159 ------------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred ------------------------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 000011234668999999998889999999999999999998 9999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+..+....+.... ..+ .... .+.++.+||.+||+.||++||++.
T Consensus 209 ~~~~~~~~~~~~~~-~~~-~~~~------~~~~~~~li~~cl~~~p~~Rp~~~ 253 (263)
T cd05052 209 IDLSQVYELLEKGY-RME-RPEG------CPPKVYELMRACWQWNPSDRPSFA 253 (263)
T ss_pred CCHHHHHHHHHCCC-CCC-CCCC------CCHHHHHHHHHHccCCcccCCCHH
Confidence 87776666665432 111 1111 123589999999999999999997
No 211
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.4e-42 Score=336.68 Aligned_cols=264 Identities=30% Similarity=0.436 Sum_probs=203.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+|++.. ++..||+|++...... ......+.+|+.+++.++||||+++++++..+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRE-----TGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECC-----CCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCee
Confidence 58999999999999999999876 5788999998754321 12345677799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+ +++|.+++.... ..+.... ++.++.||+.||+|||++||+|+|
T Consensus 75 ~~v~e~~-~~~L~~~~~~~~-~~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~H~d 124 (286)
T cd07832 75 VLVMEYM-PSDLSEVLRDEE-RPLPEAQ----------------------------VKSYMRMLLKGVAYMHANGIMHRD 124 (286)
T ss_pred EEEeccc-CCCHHHHHHhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeecCC
Confidence 9999999 999999886543 2222222 246789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++........
T Consensus 125 l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 154 (286)
T cd07832 125 LKPANLLISADGVLKIADFGLARLFSEEEP-------------------------------------------------- 154 (286)
T ss_pred cCHHHEEEcCCCcEEEeeeeecccccCCCC--------------------------------------------------
Confidence 999999999999999999999843321000
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|+..|+|||++.+.. ++.++|||||||++|+|++|.+||.+....
T Consensus 155 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~ 207 (286)
T cd07832 155 ---------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI 207 (286)
T ss_pred ---------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence 0112236899999999987654 689999999999999999999999887766
Q ss_pred HHHHHHhcCCCC-------------------CCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 404 KTLINILKKPLT-------------------FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 404 ~~~~~i~~~~~~-------------------~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
..+..+...... ++......... ......+.+||.+||..||++||++. ++++||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~----~~l~h~ 283 (286)
T cd07832 208 EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAA----EALRHP 283 (286)
T ss_pred HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHH----HHhhCc
Confidence 655554431110 00000000000 01224689999999999999999998 999999
Q ss_pred CcC
Q 010140 463 FFK 465 (517)
Q Consensus 463 ~f~ 465 (517)
||.
T Consensus 284 ~~~ 286 (286)
T cd07832 284 YFT 286 (286)
T ss_pred CcC
Confidence 984
No 212
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.9e-41 Score=332.53 Aligned_cols=271 Identities=38% Similarity=0.706 Sum_probs=207.4
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-HHHHhHHHHHHHHHHhc-CCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 162 (517)
+|++.+.||.|+||.||+|+...... +++.||+|++....... .....++..|+.++..+ +|+||++++++|+.+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~--~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHD--SGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCC--CCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence 48899999999999999998753211 56889999997654322 22345667799999999 6999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|+||||+++++|.+++.... .+.... ++.++.||+.||.|||++|++|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~----------------------------~~~~~~qi~~al~~lH~~~i~H 128 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQRE--RFKEQE----------------------------VQIYSGEIVLALEHLHKLGIIY 128 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999999887542 222222 2356789999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++......
T Consensus 129 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 159 (290)
T cd05613 129 RDIKLENILLDSNGHVVLTDFGLSKEFHEDE------------------------------------------------- 159 (290)
T ss_pred cCCCHHHeEECCCCCEEEeeCccceeccccc-------------------------------------------------
Confidence 9999999999999999999999984321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
........|+..|+|||.+.+. .++.++|||||||++|+|++|..||...
T Consensus 160 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 211 (290)
T cd05613 160 ----------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211 (290)
T ss_pred ----------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcC
Confidence 0011234688999999998753 3688999999999999999999999754
Q ss_pred Ch----HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCccccc
Q 010140 401 NN----EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR 473 (517)
Q Consensus 401 ~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~~ 473 (517)
.. .+....+......++.. ....+.+|+.+||+.||++||+.. ..+.+++.||||+.++|+.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 280 (290)
T cd05613 212 GEKNSQAEISRRILKSEPPYPQE---------MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLA 280 (290)
T ss_pred CccccHHHHHHHhhccCCCCCcc---------CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHh
Confidence 32 22333333333222221 122489999999999999999653 356799999999999998763
No 213
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-41 Score=328.77 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=197.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+.+. +..+|+|.+...... ...+..|+.+|+.++||||+++++++....
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRA------QIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQK 72 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEecc------CceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence 4679999999999999999998764 357999988654322 235667999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++|+|.+++..... .++... +..++.||+.||+|||++||+|
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQG-KLSKDM----------------------------LLSMCQDVCEGMEYLERNSFIH 123 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCcc-CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999998865321 222211 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.+||+|||+++......
T Consensus 124 ~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~------------------------------------------------- 154 (256)
T cd05114 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDE------------------------------------------------- 154 (256)
T ss_pred cccCcceEEEcCCCeEEECCCCCccccCCCc-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||++.+..++.++|||||||++|+|++ |+.||...+
T Consensus 155 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~ 206 (256)
T cd05114 155 ----------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS 206 (256)
T ss_pred ----------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 000112235668999999998889999999999999999999 999999888
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
..+....+..+....... .. ...+.+||.+||+.||++||++. ++++
T Consensus 207 ~~~~~~~i~~~~~~~~~~--~~------~~~~~~li~~c~~~~p~~Rps~~----~l~~ 253 (256)
T cd05114 207 NYEVVEMISRGFRLYRPK--LA------SMTVYEVMYSCWHEKPEGRPTFA----ELLR 253 (256)
T ss_pred HHHHHHHHHCCCCCCCCC--CC------CHHHHHHHHHHccCCcccCcCHH----HHHH
Confidence 887777777654322111 11 12489999999999999999997 6654
No 214
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.1e-41 Score=333.13 Aligned_cols=279 Identities=38% Similarity=0.611 Sum_probs=216.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~ 162 (517)
++|.+.+.||+|+||.||+|+.+. +++.||+|++.+...........+..|+.++++++ ||||+++++++..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKE-----TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcC-----CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 479999999999999999999886 67889999998765444444567778999999998 999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|.+++.... .++.... ..++.||+.||.|||++|++|
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~----------------------------~~i~~ql~~~l~~Lh~~~~~H 125 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG--SLDEKCT----------------------------RFYAAEILLALEYLHSKGIIH 125 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeee
Confidence 9999999999999999887642 2333222 367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||||+||+++.++.++|+|||++............. ....
T Consensus 126 ~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~-----------------------~~~~---------------- 166 (280)
T cd05581 126 RDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK-----------------------GDAT---------------- 166 (280)
T ss_pred cCCCHHHeEECCCCCEEecCCccccccCCccccccCC-----------------------CCCc----------------
Confidence 9999999999999999999999985433211100000 0000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.................|+..|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 167 -------------------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 167 -------------------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred -------------------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 0000000011223455789999999999888899999999999999999999999998887
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
...+..+......++... ...+.+||.+||+.||.+||++.+..+++++||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~---------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 228 YLTFQKILKLEYSFPPNF---------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHhcCCCCCCcc---------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 777777665554444322 22489999999999999999994444599999998
No 215
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-41 Score=333.36 Aligned_cols=277 Identities=21% Similarity=0.293 Sum_probs=203.3
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+.+++|++.+.||+|+||.||+|........ .++.+|+|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 78 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMD-HAQLVAIKTLKDINN--PQQWGEFQQEASLMAELHHPNIVCLLGVVTQ 78 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCC-CcceEEEEeccCCCC--HHHHHHHHHHHHHHhhCCCCCeeeEEEEEec
Confidence 3457899999999999999999987532221 457899999874321 2334567779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
+...|+||||+++|+|.+++.............. ..+ ..........+..++.||+.||+|||++||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 145 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSD------------EDG-TVKSSLDHGDFLHIAIQIAAGMEYLSSHFF 145 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccc------------ccc-ccccccCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 9999999999999999998864321100000000 000 000111223345788999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.......
T Consensus 146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 179 (283)
T cd05090 146 VHKDLAARNILIGEQLHVKISDLGLSREIYSADY---------------------------------------------- 179 (283)
T ss_pred ehhccccceEEEcCCCcEEeccccccccccCCcc----------------------------------------------
Confidence 9999999999999999999999999844321000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 180 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05090 180 ------------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYG 229 (283)
T ss_pred ------------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 001122346778999999998889999999999999999998 9999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
.........+...... +. ... ....+.++|.+||+.||++||++. +++++
T Consensus 230 ~~~~~~~~~~~~~~~~-~~-~~~------~~~~~~~li~~cl~~~p~~Rp~~~----~i~~~ 279 (283)
T cd05090 230 FSNQEVIEMVRKRQLL-PC-SED------CPPRMYSLMTECWQEGPSRRPRFK----DIHTR 279 (283)
T ss_pred CCHHHHHHHHHcCCcC-CC-CCC------CCHHHHHHHHHHcccCcccCcCHH----HHHHH
Confidence 7776666655544322 11 111 122589999999999999999997 66654
No 216
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-41 Score=329.24 Aligned_cols=250 Identities=21% Similarity=0.337 Sum_probs=198.7
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+..++|+++++||+|+||.||+|...+ +..||+|.+..... ..+.+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYNN------STKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVT 71 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEecC------CceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3556889999999999999999998653 45699998875432 2356677999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
..+..|+||||+++|+|.+++.......+..... ..++.||+.||+|||+++
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~----------------------------~~~~~~l~~~l~~LH~~~ 123 (261)
T cd05072 72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL----------------------------IDFSAQIAEGMAYIERKN 123 (261)
T ss_pred CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHH----------------------------HHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999987654333333222 367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
++||||||+||+++.++.++|+|||++.......
T Consensus 124 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 157 (261)
T cd05072 124 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---------------------------------------------- 157 (261)
T ss_pred eeccccchhhEEecCCCcEEECCCccceecCCCc----------------------------------------------
Confidence 9999999999999999999999999984322100
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 158 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 206 (261)
T cd05072 158 -------------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYP 206 (261)
T ss_pred -------------------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCC
Confidence 000112245678999999988889999999999999999998 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.........+.... ..+... . .+.++.+||.+||..||++||++.
T Consensus 207 ~~~~~~~~~~~~~~~-~~~~~~-~------~~~~~~~li~~~l~~~p~~Rp~~~ 252 (261)
T cd05072 207 GMSNSDVMSALQRGY-RMPRME-N------CPDELYDIMKTCWKEKAEERPTFD 252 (261)
T ss_pred CCCHHHHHHHHHcCC-CCCCCC-C------CCHHHHHHHHHHccCCcccCcCHH
Confidence 887777666665442 222211 1 123589999999999999999996
No 217
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.8e-41 Score=332.20 Aligned_cols=266 Identities=27% Similarity=0.403 Sum_probs=201.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--C
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--S 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~ 161 (517)
++|+..+.||.|++|.||+|.+.. +++.||+|++...... ....++.+|+++++.++||||++++++|.. .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKN-----TGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECC-----CCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 479999999999999999999986 6788999998754221 334567779999999999999999998854 4
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+.+|+||||++|++|.+++........... ...+..++.||+.||+|||+.|++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~--------------------------~~~~~~i~~~i~~~L~~lH~~~i~ 127 (287)
T cd06621 74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIG--------------------------EKVLGKIAESVLKGLSYLHSRKII 127 (287)
T ss_pred CeEEEEEEecCCCCHHHHHHHHHhcCCCCC--------------------------HHHHHHHHHHHHHHHHHHHHCCcc
Confidence 478999999999999988764321111111 112246789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
|+||+|+||+++.++.++|+|||++.....
T Consensus 128 H~dl~~~nil~~~~~~~~l~dfg~~~~~~~-------------------------------------------------- 157 (287)
T cd06621 128 HRDIKPSNILLTRKGQVKLCDFGVSGELVN-------------------------------------------------- 157 (287)
T ss_pred cCCCCHHHEEEecCCeEEEeeccccccccc--------------------------------------------------
Confidence 999999999999999999999999732110
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 158 ------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (287)
T cd06621 158 ------------------------------SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEG 207 (287)
T ss_pred ------------------------------cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence 00112347888999999998889999999999999999999999998662
Q ss_pred -----hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 402 -----NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 402 -----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
..+....+.............. .......+.+||.+||..||.+|||+. |+++||||+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~----eil~~~~~~~~~ 273 (287)
T cd06621 208 EPPLGPIELLSYIVNMPNPELKDEPGN--GIKWSEEFKDFIKQCLEKDPTRRPTPW----DMLEHPWIKAQM 273 (287)
T ss_pred CCCCChHHHHHHHhcCCchhhccCCCC--CCchHHHHHHHHHHHcCCCcccCCCHH----HHHhCccccccc
Confidence 2333333333221111111000 001123589999999999999999998 999999997643
No 218
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.1e-41 Score=331.61 Aligned_cols=245 Identities=27% Similarity=0.497 Sum_probs=189.1
Q ss_pred CCceEEeee--eccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec
Q 010140 84 DHFRLLRRL--GSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA 160 (517)
Q Consensus 84 ~~y~i~~~L--G~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~ 160 (517)
++|++.+.+ |+|+||.||+++.+. +++.+|+|++....... .|+.+...+ +||||++++++|..
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKP-----TQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcC-----CCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEec
Confidence 467777776 999999999999886 67889999987543211 122222222 79999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+..|+||||++||+|.+++.... .+..... +.++.||+.||.|||+.|+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~----------------------------~~~~~qi~~~l~~lH~~~i 130 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEV----------------------------KKIIRQLVEALNDLHKHNI 130 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHhCCe
Confidence 999999999999999999987642 3333222 3678999999999999999
Q ss_pred eeccCCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 241 iHrDLKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
+||||||+||+++.++ .++|+|||+++....
T Consensus 131 ~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~------------------------------------------------ 162 (267)
T PHA03390 131 IHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT------------------------------------------------ 162 (267)
T ss_pred eeCCCCHHHEEEeCCCCeEEEecCccceecCC------------------------------------------------
Confidence 9999999999999988 999999998733210
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.....|+..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 163 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 163 ----------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred ----------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0123578899999999988899999999999999999999999986
Q ss_pred CChHHH----HHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCC-CCChHHhhcCCCcCC
Q 010140 400 ENNEKT----LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS-LKGSVEIKRHEFFKG 466 (517)
Q Consensus 400 ~~~~~~----~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~-~~~~~ell~hp~f~~ 466 (517)
...... +..........+. .....+.+||.+||+.||.+|++. + |+|+||||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~----~~l~h~~~~~ 267 (267)
T PHA03390 209 DEDEELDLESLLKRQQKKLPFIK---------NVSKNANDFVQSMLKYNINYRLTNYN----EIIKHPFLKI 267 (267)
T ss_pred CCcchhhHHHHHHhhcccCCccc---------ccCHHHHHHHHHHhccChhhCCchHH----HHhcCCcccC
Confidence 544322 1111111111111 122358999999999999999975 6 9999999974
No 219
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.8e-42 Score=337.88 Aligned_cols=263 Identities=27% Similarity=0.372 Sum_probs=200.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|.++. .++.||+|++.+..... ...+.+.+|+.+++.++||||+++++++..++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKE-----TGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECC-----CCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCe
Confidence 479999999999999999999876 57889999986543221 234456679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+++++|..+.... ..+.... +..++.||+.||+|||++||+||
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~----------------------------~~~~~~~i~~~l~~LH~~~i~h~ 124 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYP--NGLDESR----------------------------VRKYLFQILRGIEFCHSHNIIHR 124 (286)
T ss_pred EEEEEecCCccHHHHHHhcc--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCcccc
Confidence 99999999998887765432 1222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+||+++.++.++|+|||++......
T Consensus 125 ~l~p~ni~~~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 153 (286)
T cd07846 125 DIKPENILVSQSGVVKLCDFGFARTLAAP--------------------------------------------------- 153 (286)
T ss_pred CCCHHHEEECCCCcEEEEeeeeeeeccCC---------------------------------------------------
Confidence 99999999999999999999997432110
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........|+..|+|||++.+. .++.++|||||||++|||++|++||.+...
T Consensus 154 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~ 206 (286)
T cd07846 154 ---------------------------GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD 206 (286)
T ss_pred ---------------------------ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch
Confidence 0011234578899999998764 478899999999999999999999987766
Q ss_pred HHHHHHHhcCCCC-------------------CCCCCCCCch---hHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 403 EKTLINILKKPLT-------------------FPRIGVSSSK---EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 403 ~~~~~~i~~~~~~-------------------~p~~~~~~~~---~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.+....+...... .+........ .......+.+||.+||+.||++||++. ++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~----~il~ 282 (286)
T cd07846 207 IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSS----QLLH 282 (286)
T ss_pred HHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHH----HHhc
Confidence 5544444321110 1110000000 001234589999999999999999998 9999
Q ss_pred CCCc
Q 010140 461 HEFF 464 (517)
Q Consensus 461 hp~f 464 (517)
||||
T Consensus 283 ~~~~ 286 (286)
T cd07846 283 HEFF 286 (286)
T ss_pred CCCC
Confidence 9998
No 220
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-41 Score=330.24 Aligned_cols=257 Identities=25% Similarity=0.335 Sum_probs=198.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|+... +++.||||.+.............+..|+.+++.++||||+++++++...+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLL-----DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeC-----CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe
Confidence 689999999999999999999886 678899998764332223444567779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+++|+|.+++............ ..+..++.||+.||.|||++||+||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~i~~~l~~LH~~~i~H~ 130 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPE--------------------------RTVWKYFVQLCSAVEHMHSRRVMHR 130 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCH--------------------------HHHHHHHHHHHHHHHHHhhCCeeCC
Confidence 99999999999999888653222111111 1223678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||++.......
T Consensus 131 dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------- 160 (267)
T cd08228 131 DIKPANVFITATGVVKLGDLGLGRFFSSKT-------------------------------------------------- 160 (267)
T ss_pred CCCHHHEEEcCCCCEEECccccceeccchh--------------------------------------------------
Confidence 999999999999999999999874322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh-
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN- 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~- 402 (517)
.......|++.|+|||.+.+..++.++|||||||++|||++|..||.....
T Consensus 161 ----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~ 212 (267)
T cd08228 161 ----------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 212 (267)
T ss_pred ----------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc
Confidence 001123588899999999988899999999999999999999999976532
Q ss_pred -HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 403 -EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 403 -~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
......+.... .+..... .....+.+||.+||..+|++||++. ++++
T Consensus 213 ~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~----~vl~ 260 (267)
T cd08228 213 LFSLCQKIEQCD--YPPLPTE-----HYSEKLRELVSMCIYPDPDQRPDIG----YVHQ 260 (267)
T ss_pred HHHHHHHHhcCC--CCCCChh-----hcCHHHHHHHHHHCCCCcccCcCHH----HHHH
Confidence 33333333222 2211111 1223589999999999999999998 7765
No 221
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.5e-41 Score=335.04 Aligned_cols=261 Identities=18% Similarity=0.242 Sum_probs=201.4
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
+.+..++|.+.+.||+|+||.||+|.+...........||+|+++.... ......+..|+.+++++ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 3456678999999999999999999875432233567899999875422 13345677899999999 79999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+...+..|+||||+++|+|.+++.......++... +..++.||+.||+|||+
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~----------------------------~~~i~~~i~~~l~~lH~ 159 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLED----------------------------LLSFSYQVAKGMAFLAS 159 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHH----------------------------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998754322222222 23678999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
++|+|+||||+|||++.++.++|+|||+++.......
T Consensus 160 ~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------- 196 (302)
T cd05055 160 KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN------------------------------------------- 196 (302)
T ss_pred CCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-------------------------------------------
Confidence 9999999999999999999999999999843221000
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~P 396 (517)
........+++.|+|||++.+..++.++||||+||++|+|++ |..|
T Consensus 197 ---------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 197 ---------------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ---------------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 000112246788999999998889999999999999999998 9999
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
|.+....+.+.+........+... . ...++.+||.+||+.+|++||++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~li~~cl~~~p~~Rpt~~ 292 (302)
T cd05055 244 YPGMPVDSKFYKLIKEGYRMAQPE-H------APAEIYDIMKTCWDADPLKRPTFK 292 (302)
T ss_pred cCCCCchHHHHHHHHcCCcCCCCC-C------CCHHHHHHHHHHcCCCchhCcCHH
Confidence 988776665555554332222111 1 122589999999999999999997
No 222
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-41 Score=333.07 Aligned_cols=262 Identities=26% Similarity=0.349 Sum_probs=196.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHH-HHhcCCCCccceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI-LTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~i-l~~l~HpnIv~l~~~~~~~~ 162 (517)
++|++.+.||+|+||.||+|+++. +++.||||+++...... ....+..|+.+ ++.++||||+++++++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVP-----TGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcC-----CCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence 479999999999999999999886 67899999987542211 11233345554 66679999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc-Cce
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM-GIV 241 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ii 241 (517)
..|+||||++ |+|.+++...........+. .+..++.||+.||+|||++ +++
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~--------------------------~~~~~~~qi~~~l~~lH~~~~i~ 126 (283)
T cd06617 74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPED--------------------------ILGKIAVSIVKALEYLHSKLSVI 126 (283)
T ss_pred cEEEEhhhhc-ccHHHHHHHhccCCCCCCHH--------------------------HHHHHHHHHHHHHHHHhhcCCee
Confidence 9999999995 68888876532221112111 2236789999999999998 999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.+||+|||++..+...
T Consensus 127 h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 157 (283)
T cd06617 127 HRDVKPSNVLINRNGQVKLCDFGISGYLVDS------------------------------------------------- 157 (283)
T ss_pred cCCCCHHHEEECCCCCEEEeecccccccccc-------------------------------------------------
Confidence 9999999999999999999999997432100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC----CCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG----QGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~----~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
.......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||
T Consensus 158 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 207 (283)
T cd06617 158 ------------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPY 207 (283)
T ss_pred ------------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCC
Confidence 00112357889999999865 44688999999999999999999999
Q ss_pred CCC-ChHHHHHHHhcCC-CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcc
Q 010140 398 KGE-NNEKTLINILKKP-LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 398 ~~~-~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
... ...+.+..+.... ...+... .+.++.+||.+||..+|++||++. +++.||||+...+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~~ 270 (283)
T cd06617 208 DSWKTPFQQLKQVVEEPSPQLPAEK--------FSPEFQDFVNKCLKKNYKERPNYP----ELLQHPFFELHLSK 270 (283)
T ss_pred CccccCHHHHHHHHhcCCCCCCccc--------cCHHHHHHHHHHccCChhhCcCHH----HHhcCchhhhcccc
Confidence 753 2334444444322 1121111 123589999999999999999998 99999999986543
No 223
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4e-41 Score=331.24 Aligned_cols=266 Identities=21% Similarity=0.248 Sum_probs=202.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|.+.+.||+|+||.||++.+........+..+|+|.+..... .....+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---NARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH---HHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 367999999999999999999875432223556799999875422 23456777999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|.+++............. ..........+..++.||+.||+|||++|++|
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~-----------------~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H 143 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG-----------------NRPAELTQSQMLHIAQQIAAGMVYLASQHFVH 143 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCcccccccc-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 9999999999999999987643211100000 00011223334578999999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++.+.....
T Consensus 144 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 175 (288)
T cd05093 144 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDY------------------------------------------------ 175 (288)
T ss_pred cccCcceEEEccCCcEEeccCCccccccCCce------------------------------------------------
Confidence 99999999999999999999999843221000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus 176 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~ 227 (288)
T cd05093 176 ----------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 227 (288)
T ss_pred ----------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 000112346788999999998889999999999999999998 999999888
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..+....+..+...... .. .+..+.+|+.+||+.||.+||++.
T Consensus 228 ~~~~~~~i~~~~~~~~~--~~------~~~~l~~li~~~l~~~p~~Rpt~~ 270 (288)
T cd05093 228 NNEVIECITQGRVLQRP--RT------CPKEVYDLMLGCWQREPHMRLNIK 270 (288)
T ss_pred HHHHHHHHHcCCcCCCC--CC------CCHHHHHHHHHHccCChhhCCCHH
Confidence 77777777665432111 11 122489999999999999999997
No 224
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.5e-41 Score=328.59 Aligned_cols=260 Identities=28% Similarity=0.411 Sum_probs=201.7
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH-------HHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA-------IRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~-------~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
+|.+.+.||.|+||.||+|.... +++.||+|.+...... .....+.+..|+.+++.++||||++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 76 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVT-----TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF 76 (272)
T ss_pred ceeecceecccCceEEEEEeecC-----CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 48899999999999999999876 5678999988642211 12234567789999999999999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+...+..++||||++|++|.+++... ..+.... ++.++.||+.||.|||+
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~----------------------------~~~~~~qi~~~l~~lH~ 126 (272)
T cd06629 77 ETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQL----------------------------VRFFTEQVLEGLAYLHS 126 (272)
T ss_pred eccCCceEEEEecCCCCcHHHHHhhc--cCCCHHH----------------------------HHHHHHHHHHHHHHHhh
Confidence 99999999999999999999988664 2232222 23678999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+|++||||||+||+++.++.++|+|||+++......
T Consensus 127 ~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------- 162 (272)
T cd06629 127 KGILHRDLKADNLLVDADGICKISDFGISKKSDDIY-------------------------------------------- 162 (272)
T ss_pred CCeeecCCChhhEEEcCCCeEEEeeccccccccccc--------------------------------------------
Confidence 999999999999999999999999999974321100
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC--CCccchHHHHHHHHHHHhhCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~--~~~~~DiWSlGvil~elltG~~ 395 (517)
.........|+..|+|||.+.... ++.++|+|||||++|+|++|..
T Consensus 163 --------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 210 (272)
T cd06629 163 --------------------------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210 (272)
T ss_pred --------------------------------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCC
Confidence 000112345889999999988754 7899999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCC--CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 396 PFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
||......+.+..+.... ..++..... .....+.+||.+||..||.+||++. ++++||||
T Consensus 211 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~----~il~~~~~ 272 (272)
T cd06629 211 PWSDEEAIAAMFKLGNKRSAPPIPPDVSM-----NLSPVALDFLNACFTINPDNRPTAR----ELLQHPFI 272 (272)
T ss_pred CCcCcchHHHHHHhhccccCCcCCccccc-----cCCHHHHHHHHHHhcCChhhCCCHH----HHhhCCCC
Confidence 998766555444443322 112211111 1233589999999999999999987 99999997
No 225
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.3e-41 Score=333.99 Aligned_cols=267 Identities=25% Similarity=0.338 Sum_probs=198.6
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 162 (517)
++|++.+.||+|+||.||+|.+.. +++.||||++...... ......+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKN-----TGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECC-----CCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence 479999999999999999999886 6788999998654221 12234566799999999 5699999999997665
Q ss_pred e-----eEEEEEecCCCchhHHHHhCCCC-ccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 163 Y-----SCLVMEYCPGGDLYAARQRQPGK-RFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 163 ~-----~~lV~E~~~gg~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
. .|+||||+++ +|.+++...... .....+ ..++.++.||+.||.|||
T Consensus 75 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 75 KNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPA--------------------------KTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred CCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCH--------------------------HHHHHHHHHHHHHHHHHH
Confidence 5 8999999975 898887654221 111111 122467899999999999
Q ss_pred hcCceeccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
++||+||||||+||+++. ++.+||+|||+++.+....
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------ 165 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV------------------------------------------ 165 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc------------------------------------------
Confidence 999999999999999998 8899999999984322100
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~ 394 (517)
.......+++.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus 166 ------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 209 (295)
T cd07837 166 ------------------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ 209 (295)
T ss_pred ------------------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCC
Confidence 001122468889999998764 4789999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCCCC-----C------------CCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 395 TPFKGENNEKTLINILKKPLT-----F------------PRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~-----~------------p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
.||.+.+..+.+.++...... + +......... .....++.+||.+||..||.+||++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~--- 286 (295)
T cd07837 210 PLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK--- 286 (295)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHH---
Confidence 999988776665555431100 0 0000000000 01234689999999999999999998
Q ss_pred HHhhcCCCcC
Q 010140 456 VEIKRHEFFK 465 (517)
Q Consensus 456 ~ell~hp~f~ 465 (517)
|++.||||+
T Consensus 287 -eil~~~~~~ 295 (295)
T cd07837 287 -AALTHPYFD 295 (295)
T ss_pred -HHhcCCCcC
Confidence 999999985
No 226
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8.6e-42 Score=337.51 Aligned_cols=257 Identities=25% Similarity=0.419 Sum_probs=204.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
..|.....||+|+||.||+|.+.. +++.||+|++..... .....+.+|+.+++.++||||+++++.+..++.
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~ 92 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKH-----SGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE 92 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcC-----CCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCe
Confidence 456667789999999999999876 578899999865432 223456679999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+++++|..++... .+.... +..++.||+.||+|||++||+||
T Consensus 93 ~~iv~e~~~~~~L~~~~~~~---~~~~~~----------------------------~~~~~~qi~~~L~~LH~~~ivH~ 141 (297)
T cd06659 93 LWVLMEFLQGGALTDIVSQT---RLNEEQ----------------------------IATVCESVLQALCYLHSQGVIHR 141 (297)
T ss_pred EEEEEecCCCCCHHHHHhhc---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeecC
Confidence 99999999999998876542 222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.+||+|||++..+...
T Consensus 142 dl~p~Nill~~~~~~kL~dfg~~~~~~~~--------------------------------------------------- 170 (297)
T cd06659 142 DIKSDSILLTLDGRVKLSDFGFCAQISKD--------------------------------------------------- 170 (297)
T ss_pred CCCHHHeEEccCCcEEEeechhHhhcccc---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
........|+..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 171 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 223 (297)
T cd06659 171 ---------------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV 223 (297)
T ss_pred ---------------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00112346899999999999888999999999999999999999999887776
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
+.+..+............. ....+.++|.+||+.+|++||++. ++++||||...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~------~~~~l~~~i~~~l~~~P~~Rps~~----~ll~~~~~~~~ 277 (297)
T cd06659 224 QAMKRLRDSPPPKLKNAHK------ISPVLRDFLERMLTREPQERATAQ----ELLDHPFLLQT 277 (297)
T ss_pred HHHHHHhccCCCCccccCC------CCHHHHHHHHHHhcCCcccCcCHH----HHhhChhhccC
Confidence 6666554433222111111 123489999999999999999998 99999999854
No 227
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.3e-42 Score=343.41 Aligned_cols=270 Identities=20% Similarity=0.312 Sum_probs=199.4
Q ss_pred eeeecc--ceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEE
Q 010140 90 RRLGSG--DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 90 ~~LG~G--~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 167 (517)
..||+| +||+||+|++.. +++.||+|++...... ....+.+.+|+.+++.++||||++++++|..++..|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTP-----TGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcC-----CCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEE
Confidence 356666 999999999876 6789999998754322 13346777899999999999999999999999999999
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCC
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKP 247 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp 247 (517)
|||+.+|+|.+++.......++... ++.++.||+.||+|||++||+||||||
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~----------------------------~~~~~~qi~~aL~~lH~~~ivHrDlkp 129 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPEGMSEAL----------------------------IGNILFGALRGLNYLHQNGYIHRNIKA 129 (328)
T ss_pred EecccCCCHHHHHHhhcccCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 9999999999988765333333222 236789999999999999999999999
Q ss_pred CceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccc
Q 010140 248 ENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIR 327 (517)
Q Consensus 248 ~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (517)
+|||++.++.++++||+.+.........
T Consensus 130 ~Nill~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 157 (328)
T cd08226 130 SHILISGDGLVSLSGLSHLYSLVRNGQK---------------------------------------------------- 157 (328)
T ss_pred HHEEEeCCCcEEEechHHHhhhhccCcc----------------------------------------------------
Confidence 9999999999999999865221100000
Q ss_pred cccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhhCCCCCCCCChHHH
Q 010140 328 EQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405 (517)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~ 405 (517)
............++..|+|||++.+. .++.++|||||||++|+|++|..||.+......
T Consensus 158 -------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~ 218 (328)
T cd08226 158 -------------------AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM 218 (328)
T ss_pred -------------------ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH
Confidence 00000000112356779999999774 478999999999999999999999988776655
Q ss_pred HHHHhcCCCCCCCCC--------------------------------------CCCchhHHhhhhHHHHHHHhccCCccc
Q 010140 406 LINILKKPLTFPRIG--------------------------------------VSSSKEFEEVVKLQDLISKLLVKNPKK 447 (517)
Q Consensus 406 ~~~i~~~~~~~p~~~--------------------------------------~~~~~~~~~~~~l~dLi~~~L~~dP~~ 447 (517)
...+.......|... ............+.+||.+||+.||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 298 (328)
T cd08226 219 LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK 298 (328)
T ss_pred HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence 555444322211100 000011123456899999999999999
Q ss_pred ccCCCCChHHhhcCCCcCCCC
Q 010140 448 RIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 448 R~t~~~~~~ell~hp~f~~~~ 468 (517)
|||+. |+++||||+.+.
T Consensus 299 Rpta~----e~l~~~~~~~~~ 315 (328)
T cd08226 299 RPSAS----SLLSHAFFKQVK 315 (328)
T ss_pred CCCHH----HHhhCHHHHHHH
Confidence 99998 999999997654
No 228
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.3e-41 Score=329.59 Aligned_cols=270 Identities=23% Similarity=0.300 Sum_probs=205.2
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
++..++|++.+.||+|+||.||+|..+....+.....||+|.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH--HHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 3556789999999999999999999876443345688999998654321 22345667999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.....|+||||+++|+|.+++.......... ..........+..++.||+.||.|||++|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 139 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENN--------------------PGLGPPTLQKFIQMAAEIADGMAYLAAKK 139 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhc--------------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999987643211000 00001112223467899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||+++.......
T Consensus 140 i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 174 (277)
T cd05032 140 FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDY--------------------------------------------- 174 (277)
T ss_pred ccccccChheEEEcCCCCEEECCcccchhhccCcc---------------------------------------------
Confidence 99999999999999999999999999843221000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 175 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 223 (277)
T cd05032 175 -------------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQ 223 (277)
T ss_pred -------------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCc
Confidence 001122346788999999988889999999999999999998 999999
Q ss_pred CCChHHHHHHHhcCCC-CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 399 GENNEKTLINILKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+.+..+....+..... ..|. .. ...+.+||.+||+.+|++|||+. +++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~li~~~l~~~p~~Rpt~~----~l~~ 273 (277)
T cd05032 224 GLSNEEVLKFVIDGGHLDLPE---NC------PDKLLELMRMCWQYNPKMRPTFL----EIVS 273 (277)
T ss_pred cCCHHHHHHHHhcCCCCCCCC---CC------CHHHHHHHHHHcCCChhhCCCHH----HHHH
Confidence 8877776666654322 1221 11 23589999999999999999997 6654
No 229
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.1e-41 Score=325.85 Aligned_cols=256 Identities=27% Similarity=0.497 Sum_probs=204.4
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|.+.+.||+|+||.||+|..+. .+..+|+|.+....... .....+.+|+.+++.++|+||+++++.+..+...
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKS-----DSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcC-----CCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeE
Confidence 58999999999999999999987 56789999997653322 2334566799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+|+||+++++|.+++.......+.... .+.++.||+.||.|||+++|+|+|
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~~l~~lh~~~i~H~d 126 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRGVLFSEDQ----------------------------ILSWFVQISLGLKHIHDRKILHRD 126 (257)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCccccc
Confidence 9999999999999988764332222222 236789999999999999999999
Q ss_pred CCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 245 LKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 245 LKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
|||+||+++.++ .+||+|||.+.......
T Consensus 127 l~~~nil~~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------------- 156 (257)
T cd08225 127 IKSQNIFLSKNGMVAKLGDFGIARQLNDSM-------------------------------------------------- 156 (257)
T ss_pred CCHHHEEEcCCCCeEEecccccchhccCCc--------------------------------------------------
Confidence 999999999886 46999999874322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 157 ----------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 208 (257)
T cd08225 157 ----------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH 208 (257)
T ss_pred ----------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 0011235889999999998888999999999999999999999999887776
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
+....+....... .... ...++.++|.+||..+|++||++. ++++||||
T Consensus 209 ~~~~~~~~~~~~~--~~~~------~~~~~~~~i~~~l~~~p~~Rpt~~----~ll~~~~~ 257 (257)
T cd08225 209 QLVLKICQGYFAP--ISPN------FSRDLRSLISQLFKVSPRDRPSIT----SILKRPFL 257 (257)
T ss_pred HHHHHHhcccCCC--CCCC------CCHHHHHHHHHHhccChhhCcCHH----HHhhCCCC
Confidence 6666655543221 1111 112589999999999999999998 99999997
No 230
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.1e-41 Score=331.72 Aligned_cols=270 Identities=20% Similarity=0.236 Sum_probs=204.0
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
...+|.+.+.||+|+||.||+|++...........+++|.+...... ....+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHH---HHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 34679999999999999999998765433345677999998755432 234566799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..++||||+++++|.+++............. .............+..++.||+.||+|||++||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~ 145 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG--------------QPRQAKGELGLSQMLHIASQIASGMVYLASQHFV 145 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCccccccccc--------------ccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999997653211100000 0000011122334457899999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.++|+|||++........
T Consensus 146 H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~----------------------------------------------- 178 (291)
T cd05094 146 HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY----------------------------------------------- 178 (291)
T ss_pred ecccCcceEEEccCCcEEECCCCcccccCCCce-----------------------------------------------
Confidence 999999999999999999999999843221000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
........|+..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 179 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 229 (291)
T cd05094 179 -----------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 229 (291)
T ss_pred -----------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 001122357889999999999889999999999999999998 99999888
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+..+....+......... .. .+..+.+||.+||+.||++||++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~~l~~~P~~Rpt~~ 273 (291)
T cd05094 230 SNTEVIECITQGRVLERP--RV------CPKEVYDIMLGCWQREPQQRLNIK 273 (291)
T ss_pred CHHHHHHHHhCCCCCCCC--cc------CCHHHHHHHHHHcccChhhCcCHH
Confidence 877766666554332211 11 123589999999999999999997
No 231
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.2e-41 Score=334.05 Aligned_cols=269 Identities=26% Similarity=0.343 Sum_probs=201.7
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|++.+.||+|++|.||+|+++. +++.||+|.+...... ......+..|+.+++.++||||+++++++.++.
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRV-----TNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK 74 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecC-----CCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCC
Confidence 3689999999999999999999876 6788999998654221 123345667999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||++ ++|.+++.......+... .++.++.||+.||+|||++||+|
T Consensus 75 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~----------------------------~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 75 RLYLVFEYLD-LDLKKHMDSSPDFAKNPR----------------------------LIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred eEEEEEeccc-ccHHHHHHhCCCCCcCHH----------------------------HHHHHHHHHHHHHHHHHhCCeeC
Confidence 9999999995 688887755432222211 12367889999999999999999
Q ss_pred ccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 243 RDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 243 rDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
|||||+||+++. ++.+||+|||++.......
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 157 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPV------------------------------------------------ 157 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccccCCCc------------------------------------------------
Confidence 999999999985 5679999999984322100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
.......|++.|+|||.+.+. .++.++|||||||++|+|++|.+||...
T Consensus 158 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 158 ------------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred ------------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 001123578899999998764 4789999999999999999999999887
Q ss_pred ChHHHHHHHhcCCCC------------------CCCCCCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 401 NNEKTLINILKKPLT------------------FPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~------------------~p~~~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+..+.+.++...... .+........ .......+.++|.+||+.||++||++. +++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~----~~l~ 283 (294)
T PLN00009 208 SEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITAR----AALE 283 (294)
T ss_pred CHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHH----HHhc
Confidence 766655554321100 0000000000 001233588999999999999999998 9999
Q ss_pred CCCcCCCC
Q 010140 461 HEFFKGIN 468 (517)
Q Consensus 461 hp~f~~~~ 468 (517)
||||++++
T Consensus 284 ~~~~~~~~ 291 (294)
T PLN00009 284 HEYFKDLG 291 (294)
T ss_pred CchHhHHh
Confidence 99999765
No 232
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-41 Score=333.92 Aligned_cols=263 Identities=28% Similarity=0.361 Sum_probs=195.0
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|.++. +++.||+|++..... ......+.+|+.+++.++|+||+++++++..++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 76 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRI-----NGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKE 76 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcC-----CCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC
Confidence 3689999999999999999999886 577899999865421 122234556999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+. ++|..++.... ..+.... ++.++.||+.||+|||++||+|
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~----------------------------~~~~~~qi~~~L~~lH~~~i~H 126 (291)
T cd07870 77 TLTFVFEYMH-TDLAQYMIQHP-GGLHPYN----------------------------VRLFMFQLLRGLAYIHGQHILH 126 (291)
T ss_pred eEEEEEeccc-CCHHHHHHhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCccc
Confidence 9999999995 67777665432 1222221 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++.....
T Consensus 127 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-------------------------------------------------- 156 (291)
T cd07870 127 RDLKPQNLLISYLGELKLADFGLARAKSIP-------------------------------------------------- 156 (291)
T ss_pred CCCChHHEEEcCCCcEEEeccccccccCCC--------------------------------------------------
Confidence 999999999999999999999987432100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
........+++.|+|||++.+. .++.++|||||||++|+|++|..||.+..
T Consensus 157 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 157 ----------------------------SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred ----------------------------CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 0001123578899999998764 47889999999999999999999998655
Q ss_pred hH-HHHHHHhcCCC-C----------CC--------CCCCCCc----hhHHhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 402 NE-KTLINILKKPL-T----------FP--------RIGVSSS----KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 402 ~~-~~~~~i~~~~~-~----------~p--------~~~~~~~----~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
.. +.+..+..... . .+ ....... ........+.+||.+||+.||.+|||+. |
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~----~ 284 (291)
T cd07870 209 DVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQ----D 284 (291)
T ss_pred hHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHH----H
Confidence 42 22222221000 0 00 0000000 0011234688999999999999999998 9
Q ss_pred hhcCCCc
Q 010140 458 IKRHEFF 464 (517)
Q Consensus 458 ll~hp~f 464 (517)
++.||||
T Consensus 285 ~l~h~~~ 291 (291)
T cd07870 285 ALLHPYF 291 (291)
T ss_pred HhcCCCC
Confidence 9999998
No 233
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.4e-42 Score=331.50 Aligned_cols=256 Identities=31% Similarity=0.447 Sum_probs=203.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||.|+||.||+|.++. +++.+|+|.+...... .....+.+|+.+++.++||||+++++.+...+.
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 73 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRP-----TGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGD 73 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcC-----CCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCE
Confidence 468899999999999999999886 6788999998765322 344566779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-cCcee
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-MGIVY 242 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~~iiH 242 (517)
.|+||||+++++|.+++.... ..++... +..++.||+.||+|||+ .|++|
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~----------------------------~~~~~~~l~~~l~~lH~~~~i~H 124 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEVQ-GRIPERI----------------------------LGKIAVAVLKGLTYLHEKHKIIH 124 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcc-CCCCHHH----------------------------HHHHHHHHHHHHHHHcCCCCeec
Confidence 999999999999999887642 2222222 23678999999999999 99999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.++|+|||.+.....
T Consensus 125 ~dl~~~ni~~~~~~~~~l~d~g~~~~~~~--------------------------------------------------- 153 (265)
T cd06605 125 RDVKPSNILVNSRGQIKLCDFGVSGQLVN--------------------------------------------------- 153 (265)
T ss_pred CCCCHHHEEECCCCCEEEeecccchhhHH---------------------------------------------------
Confidence 99999999999999999999998732210
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC-
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN- 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~- 401 (517)
.......|+..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 154 -----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 204 (265)
T cd06605 154 -----------------------------SLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEND 204 (265)
T ss_pred -----------------------------HHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc
Confidence 00011468889999999999889999999999999999999999997652
Q ss_pred ----hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 402 ----NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 402 ----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
..+.+..+..... +..... ....++.+||.+||..||++||++. +++.||||+.
T Consensus 205 ~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~----~ll~~~~~~~ 262 (265)
T cd06605 205 PPDGIFELLQYIVNEPP--PRLPSG-----KFSPDFQDFVNLCLIKDPRERPSYK----ELLEHPFIKK 262 (265)
T ss_pred ccccHHHHHHHHhcCCC--CCCChh-----hcCHHHHHHHHHHcCCCchhCcCHH----HHhhCchhhc
Confidence 2333444433321 111110 0223589999999999999999998 9999999964
No 234
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.3e-41 Score=329.89 Aligned_cols=256 Identities=27% Similarity=0.424 Sum_probs=204.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|...+.||+|++|.||++.+.. .++.+|+|++..... .....+.+|+.+++.++||||+++++++..++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~ 91 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKS-----TGRQVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL 91 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECC-----CCCEEEEEEEeccch---hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE
Confidence 46667899999999999999876 567899998864322 2234466799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+|+||++|++|.+++... .+.... +..++.||+.||+|||++||+|||
T Consensus 92 ~~v~e~~~~~~L~~~~~~~---~~~~~~----------------------------~~~~~~ql~~~l~~lH~~~i~H~d 140 (285)
T cd06648 92 WVVMEFLEGGALTDIVTHT---RMNEEQ----------------------------IATVCLAVLKALSFLHAQGVIHRD 140 (285)
T ss_pred EEEEeccCCCCHHHHHHhC---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeecCC
Confidence 9999999999999987652 222222 236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++......
T Consensus 141 l~p~Nil~~~~~~~~l~d~g~~~~~~~~---------------------------------------------------- 168 (285)
T cd06648 141 IKSDSILLTSDGRVKLSDFGFCAQVSKE---------------------------------------------------- 168 (285)
T ss_pred CChhhEEEcCCCcEEEcccccchhhccC----------------------------------------------------
Confidence 9999999999999999999987322100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus 169 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~ 222 (285)
T cd06648 169 --------------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ 222 (285)
T ss_pred --------------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence 001122458899999999998889999999999999999999999998887777
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
.+..+............ .....+.+||.+||+.||++||++. ++++||||+..
T Consensus 223 ~~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rpt~~----~il~~~~~~~~ 275 (285)
T cd06648 223 AMKRIRDNLPPKLKNLH------KVSPRLRSFLDRMLVRDPAQRATAA----ELLNHPFLAKA 275 (285)
T ss_pred HHHHHHhcCCCCCcccc------cCCHHHHHHHHHHcccChhhCcCHH----HHccCcccccC
Confidence 66666654322211111 1223589999999999999999998 99999999864
No 235
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-41 Score=334.35 Aligned_cols=256 Identities=26% Similarity=0.387 Sum_probs=202.2
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++++.||+|+||+||+|.+.. .++.||+|++..... ......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIP-----TGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNE 75 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcC-----CCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence 34689999999999999999999876 578899998865421 23345677899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-cCc
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-MGI 240 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~~i 240 (517)
..+|+||||+++++|..++.... .+.... ++.++.|++.||.|||+ .+|
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~----------------------------~~~~~~~i~~~l~~LH~~~~i 125 (284)
T cd06620 76 NNICMCMEFMDCGSLDRIYKKGG--PIPVEI----------------------------LGKIAVAVVEGLTYLYNVHRI 125 (284)
T ss_pred CEEEEEEecCCCCCHHHHHHhcc--CCCHHH----------------------------HHHHHHHHHHHHHHHHHhcCe
Confidence 99999999999999998876532 222222 23678999999999997 599
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.++|+|||++.....
T Consensus 126 ~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~------------------------------------------------- 156 (284)
T cd06620 126 MHRDIKPSNILVNSRGQIKLCDFGVSGELIN------------------------------------------------- 156 (284)
T ss_pred eccCCCHHHEEECCCCcEEEccCCcccchhh-------------------------------------------------
Confidence 9999999999999999999999998732110
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
.......|+..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 157 -------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~ 205 (284)
T cd06620 157 -------------------------------SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFS 205 (284)
T ss_pred -------------------------------hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 0011346899999999998888999999999999999999999999865
Q ss_pred ChH-----------HHHHHHhcCCC-CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 401 NNE-----------KTLINILKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 401 ~~~-----------~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
... +....+..... .++.. ....++.+||.+||+.||++||++. |+++|+||..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~dp~~Rpt~~----e~~~~~~~~~ 271 (284)
T cd06620 206 NIDDDGQDDPMGILDLLQQIVQEPPPRLPSS--------DFPEDLRDFVDACLLKDPTERPTPQ----QLCAMPPFIQ 271 (284)
T ss_pred chhhhhhhhhhHHHHHHHHHhhccCCCCCch--------hcCHHHHHHHHHHhcCCcccCcCHH----HHhcCccccc
Confidence 442 22333332221 11110 1223589999999999999999998 9999999854
No 236
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.3e-41 Score=332.75 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=205.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
..|+.++.||.|+||.||+|.+.. .+..||+|++..... ......+.+|+.+++.++||||+++++++.++..
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNR-----TQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTK 76 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEcc-----CCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE
Confidence 358889999999999999999876 568899999875422 2345677789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++||+|.+++... .+.... +..++.|++.||+|||+++++|+
T Consensus 77 ~~lv~e~~~~~~L~~~i~~~---~l~~~~----------------------------~~~~~~~l~~~l~~lh~~~ivH~ 125 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRAG---PFDEFQ----------------------------IATMLKEILKGLDYLHSEKKIHR 125 (277)
T ss_pred EEEEEecCCCCcHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999999988642 222221 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+||+++.++.++|+|||++..+...
T Consensus 126 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 154 (277)
T cd06640 126 DIKAANVLLSEQGDVKLADFGVAGQLTDT--------------------------------------------------- 154 (277)
T ss_pred CCChhhEEEcCCCCEEEcccccceeccCC---------------------------------------------------
Confidence 99999999999999999999998432210
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
........++..|+|||++.+..++.++|+|||||++|||++|..||......
T Consensus 155 ---------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 207 (277)
T cd06640 155 ---------------------------QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM 207 (277)
T ss_pred ---------------------------ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH
Confidence 00112235788999999999888999999999999999999999999887765
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
.....+..... +... ......+.+||.+||+.+|++||++. ++++||||....
T Consensus 208 ~~~~~~~~~~~--~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~ 260 (277)
T cd06640 208 RVLFLIPKNNP--PTLT------GEFSKPFKEFIDACLNKDPSFRPTAK----ELLKHKFIVKNA 260 (277)
T ss_pred hHhhhhhcCCC--CCCc------hhhhHHHHHHHHHHcccCcccCcCHH----HHHhChHhhhcc
Confidence 55444332211 1111 12234589999999999999999998 999999997654
No 237
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-41 Score=332.91 Aligned_cols=276 Identities=18% Similarity=0.221 Sum_probs=206.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+...+|++.+.||+|+||.||+|.+........++.||||++..... ......+..|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 34567899999999999999999987543333567899999975421 1234556779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
....++++||+++++|.+++.............. ............+..++.|++.||+|||++||
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi 145 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDD--------------DKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV 145 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCcccccccc--------------ccccccccCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999864321110000000 00001112223345788999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.......
T Consensus 146 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 179 (283)
T cd05091 146 VHKDLATRNVLVFDKLNVKISDLGLFREVYAADY---------------------------------------------- 179 (283)
T ss_pred cccccchhheEecCCCceEecccccccccccchh----------------------------------------------
Confidence 9999999999999999999999999843221000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 180 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 229 (283)
T cd05091 180 ------------------------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 229 (283)
T ss_pred ------------------------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 000122346788999999988889999999999999999998 8999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
....+....+.......... . .+..+.+|+.+||+.+|.+||++. ++++
T Consensus 230 ~~~~~~~~~i~~~~~~~~~~--~------~~~~~~~li~~cl~~~p~~RP~~~----~i~~ 278 (283)
T cd05091 230 YSNQDVIEMIRNRQVLPCPD--D------CPAWVYTLMLECWNEFPSRRPRFK----DIHS 278 (283)
T ss_pred CCHHHHHHHHHcCCcCCCCC--C------CCHHHHHHHHHHhCCCcccCCCHH----HHHH
Confidence 88877777777654332111 1 122489999999999999999997 7765
No 238
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=348.89 Aligned_cols=253 Identities=23% Similarity=0.354 Sum_probs=200.1
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH-HHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce--
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA-LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY-- 163 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~-- 163 (517)
+...+||+|+|-+||+|.+.. ++..||--.++-.. ......++++..|+.+|+.|+|||||++|++|.+...
T Consensus 43 k~~evLGrGafKtVYka~De~-----~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEE-----EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred ehhhhcccccceeeeeccccc-----cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence 566789999999999999976 34445533333222 2334567889999999999999999999999987655
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC--ce
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG--IV 241 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~--ii 241 (517)
+-+|+|++..|+|..|+++++. ..+. -++.|++||++||.|||++. ||
T Consensus 118 in~iTEL~TSGtLr~Y~kk~~~--vn~k----------------------------aik~W~RQILkGL~yLHs~~PPII 167 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKHRR--VNIK----------------------------AIKSWCRQILKGLVYLHSQDPPII 167 (632)
T ss_pred eeeeeecccCCcHHHHHHHhcc--CCHH----------------------------HHHHHHHHHHHHhhhhhcCCCCcc
Confidence 7899999999999999988743 2222 23589999999999999995 99
Q ss_pred eccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 242 YRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 242 HrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
|||||++||+|+. .|.|||+|+|||....
T Consensus 168 HRDLKCDNIFinG~~G~VKIGDLGLAtl~r-------------------------------------------------- 197 (632)
T KOG0584|consen 168 HRDLKCDNIFVNGNLGEVKIGDLGLATLLR-------------------------------------------------- 197 (632)
T ss_pred ccccccceEEEcCCcCceeecchhHHHHhh--------------------------------------------------
Confidence 9999999999985 5899999999994322
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
......++|||.|||||++. ..|+..+||||||.+|.||+|+.+||..-
T Consensus 198 ------------------------------~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC 246 (632)
T KOG0584|consen 198 ------------------------------KSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC 246 (632)
T ss_pred ------------------------------ccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh
Confidence 11233468999999999998 56999999999999999999999999875
Q ss_pred Ch-HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 401 NN-EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 401 ~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
.+ .+++.++..+..+-. ...... +++++||.+||.. ..+|+++. |||+||||..-
T Consensus 247 ~n~AQIYKKV~SGiKP~s-l~kV~d------Pevr~fIekCl~~-~~~R~sa~----eLL~d~Ff~~d 302 (632)
T KOG0584|consen 247 TNPAQIYKKVTSGIKPAA-LSKVKD------PEVREFIEKCLAT-KSERLSAK----ELLKDPFFDED 302 (632)
T ss_pred CCHHHHHHHHHcCCCHHH-hhccCC------HHHHHHHHHHhcC-chhccCHH----HHhhChhhccc
Confidence 54 566777766543211 111111 2589999999999 99999998 99999999863
No 239
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.1e-42 Score=336.05 Aligned_cols=266 Identities=25% Similarity=0.310 Sum_probs=199.0
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecC
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~ 161 (517)
.++|...+.||+|+||.||++++.. +++.||+|.+...... .....+..|+.++.++. ||||+++++++...
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~ 75 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKP-----SGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE 75 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECC-----CCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence 3567788899999999999999886 6789999998754322 33456677999999996 99999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHh---CCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 162 HYSCLVMEYCPGGDLYAARQR---QPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
+..+++|||+. ++|.++... .....++.. .+..++.|++.||+|||+.
T Consensus 76 ~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~----------------------------~~~~i~~~i~~~l~~lh~~ 126 (288)
T cd06616 76 GDCWICMELMD-ISLDKFYKYVYEVLKSVIPEE----------------------------ILGKIAVATVKALNYLKEE 126 (288)
T ss_pred CcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHH----------------------------HHHHHHHHHHHHHHHHhhc
Confidence 99999999994 566554322 111222222 2347789999999999975
Q ss_pred -CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 239 -GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 239 -~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||+||||||+|||++.++.+||+|||+++.....
T Consensus 127 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--------------------------------------------- 161 (288)
T cd06616 127 LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS--------------------------------------------- 161 (288)
T ss_pred CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC---------------------------------------------
Confidence 9999999999999999999999999998432100
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---CCCccchHHHHHHHHHHHhhCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~~~~~~DiWSlGvil~elltG~ 394 (517)
.......|++.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 162 ----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 207 (288)
T cd06616 162 ----------------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207 (288)
T ss_pred ----------------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC
Confidence 001123588899999999876 5899999999999999999999
Q ss_pred CCCCCCCh-HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCccc
Q 010140 395 TPFKGENN-EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL 471 (517)
Q Consensus 395 ~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~ 471 (517)
.||..... .+.+.++..... +..... .......++.+||.+||+.||++||++. ++++||||+...|..
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~----~i~~~~~~~~~~~~~ 277 (288)
T cd06616 208 FPYPKWNSVFDQLTQVVKGDP--PILSNS--EEREFSPSFVNFINLCLIKDESKRPKYK----ELLEHPFIKDYEERN 277 (288)
T ss_pred CCchhcchHHHHHhhhcCCCC--CcCCCc--CCCccCHHHHHHHHHHccCChhhCcCHH----HHhcChhhhchhhcc
Confidence 99976542 222333332221 111111 0012334689999999999999999998 999999999866543
No 240
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3e-41 Score=332.87 Aligned_cols=279 Identities=19% Similarity=0.212 Sum_probs=207.2
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
..+..++|++.+.||+|+||.||++.............+|+|.+...... .....+.+|+.+++++ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 44566789999999999999999999876432234578999998754221 2345577799999999 89999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+..++.+|+||||+++|+|..++.............. ............+..++.||+.||+|||+
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 150 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDD--------------PRPPEETLTQKDLVSFAYQVARGMEFLAS 150 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccccccc--------------ccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876421111000000 00011122333456789999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+||+||||||+|||++.++.+||+|||+++.......
T Consensus 151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------- 187 (293)
T cd05053 151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDY------------------------------------------- 187 (293)
T ss_pred CCccccccceeeEEEcCCCeEEeCccccccccccccc-------------------------------------------
Confidence 9999999999999999999999999999854321000
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~P 396 (517)
........++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 188 ---------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 234 (293)
T cd05053 188 ---------------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234 (293)
T ss_pred ---------------------------------eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCC
Confidence 000111235678999999988889999999999999999997 9999
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
|.+....+....+...... . ... .....+.+|+.+||..||++|||+. |++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-~-~~~------~~~~~~~~li~~~l~~~p~~Rps~~----eil~~ 287 (293)
T cd05053 235 YPGIPVEELFKLLKEGYRM-E-KPQ------NCTQELYHLMRDCWHEVPSQRPTFK----QLVED 287 (293)
T ss_pred CCCCCHHHHHHHHHcCCcC-C-CCC------CCCHHHHHHHHHHcccCcccCcCHH----HHHHH
Confidence 9988777766666544321 1 111 1123589999999999999999997 66653
No 241
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.8e-41 Score=339.89 Aligned_cols=266 Identities=25% Similarity=0.331 Sum_probs=196.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-- 161 (517)
++|++.+.||+|+||.||+|++.. +++.||||++..... .....++..|+.++++++||||+++++++...
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 77 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKP-----TGVKVAIKKISPFEH--QTFCQRTLREIKILRRFKHENIIGILDIIRPPSF 77 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcC-----CCCeEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCcCchhheeecccc
Confidence 689999999999999999999876 678899999864211 12344566799999999999999999987543
Q ss_pred ---ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 162 ---HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 162 ---~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
...|+||||+. ++|..++... .+.... ++.++.||+.||+|||++
T Consensus 78 ~~~~~~~lv~e~~~-~~l~~~~~~~---~l~~~~----------------------------~~~i~~ql~~aL~~LH~~ 125 (336)
T cd07849 78 ESFNDVYIVQELME-TDLYKLIKTQ---HLSNDH----------------------------IQYFLYQILRGLKYIHSA 125 (336)
T ss_pred cccceEEEEehhcc-cCHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHHhC
Confidence 35899999995 5887766542 233222 236789999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||+||||||+|||++.++.+||+|||+++........
T Consensus 126 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------- 162 (336)
T cd07849 126 NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH------------------------------------------- 162 (336)
T ss_pred CeeccCCCHHHEEECCCCCEEECcccceeeccccccc-------------------------------------------
Confidence 9999999999999999999999999998432210000
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 163 --------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f 210 (336)
T cd07849 163 --------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLF 210 (336)
T ss_pred --------------------------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 001123468999999998765 45899999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCC--------------------CCCCCCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 398 KGENNEKTLINILKKPLT--------------------FPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~--------------------~p~~~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
.+.+.......+...... .+........ ......++.+||.+||+.||++||++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~--- 287 (336)
T cd07849 211 PGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVE--- 287 (336)
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHH---
Confidence 876554433322210000 0000000000 001234589999999999999999998
Q ss_pred HHhhcCCCcCCC
Q 010140 456 VEIKRHEFFKGI 467 (517)
Q Consensus 456 ~ell~hp~f~~~ 467 (517)
|+++||||+..
T Consensus 288 -e~l~hp~~~~~ 298 (336)
T cd07849 288 -EALAHPYLEQY 298 (336)
T ss_pred -HHhcCcccccc
Confidence 99999999864
No 242
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.9e-41 Score=326.22 Aligned_cols=256 Identities=26% Similarity=0.400 Sum_probs=203.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee--cCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE--ASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~ 162 (517)
+|++++.||.|+||.||+|.+.. +++.||+|++...... .....++..|+.+++.++||||+++++++. .+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKS-----DGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecC-----CCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC
Confidence 58999999999999999999886 5678999998654322 233456777999999999999999999775 455
Q ss_pred eeEEEEEecCCCchhHHHHhCCC--CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH----
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPG--KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH---- 236 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---- 236 (517)
..|++|||+++++|.+++..... ..++.. .+..++.||+.||+|||
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~----------------------------~~~~~~~~i~~~l~~lH~~~~ 126 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEE----------------------------FIWRILTQLLLALYECHNRSD 126 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHH----------------------------HHHHHHHHHHHHHHHHhcCcc
Confidence 78999999999999999876422 122222 22367899999999999
Q ss_pred -hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 237 -MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 237 -~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
+.+|+|+||||+||+++.++.+||+|||++.......
T Consensus 127 ~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~------------------------------------------ 164 (265)
T cd08217 127 PGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS------------------------------------------ 164 (265)
T ss_pred ccCcceecCCCHHHEEEecCCCEEEecccccccccCCc------------------------------------------
Confidence 8999999999999999999999999999984332100
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~ 395 (517)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..
T Consensus 165 ------------------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 208 (265)
T cd08217 165 ------------------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP 208 (265)
T ss_pred ------------------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 00123368999999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
||...+.......+...... ..... ....+.+|+.+||+.+|++||++. ++++|||+
T Consensus 209 p~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~l~~~~l~~~p~~Rp~~~----~il~~~~~ 265 (265)
T cd08217 209 PFTARNQLQLASKIKEGKFR--RIPYR------YSSELNEVIKSMLNVDPDKRPSTE----ELLQLPLI 265 (265)
T ss_pred cccCcCHHHHHHHHhcCCCC--CCccc------cCHHHHHHHHHHccCCcccCCCHH----HHhhCCCC
Confidence 99988766666665554322 11111 123589999999999999999998 99999995
No 243
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.7e-41 Score=325.99 Aligned_cols=257 Identities=27% Similarity=0.401 Sum_probs=195.0
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..+.+.....||+|+||.||+|++.. ++..||+|.+..... ...+.+.+|+.+++.++|+||+++++++..+
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 77 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLS-----TQVRIAIKEIPERDS---RYVQPLHEEIALHSYLKHRNIVQYLGSDSEN 77 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecC-----CCcEEEEEEecCCCH---HHHHHHHHHHHHHHhcCCCCeeeeeeeeccC
Confidence 44556666789999999999999876 567899998865432 2334667799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||+++++|.+++..... .+.... ..+..++.||+.||+|||++||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~--------------------------~~~~~~~~qi~~al~~lH~~~i~ 130 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRSKWG-PLKDNE--------------------------QTIIFYTKQILEGLKYLHDNQIV 130 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHHhcc-cCCCcH--------------------------HHHHHHHHHHHHHHHHHHHCCEe
Confidence 999999999999999998875321 110011 11236789999999999999999
Q ss_pred eccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 242 YRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 242 HrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
||||||+||+++. ++.++|+|||++......
T Consensus 131 h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------------------------------------------------ 162 (268)
T cd06624 131 HRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI------------------------------------------------ 162 (268)
T ss_pred ecCCCHHHEEEcCCCCeEEEecchhheecccC------------------------------------------------
Confidence 9999999999976 679999999987432100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC--CCccchHHHHHHHHHHHhhCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~--~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........|++.|+|||++.+.. ++.++|||||||++|+|++|..||.
T Consensus 163 ------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~ 212 (268)
T cd06624 163 ------------------------------NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFI 212 (268)
T ss_pred ------------------------------CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCc
Confidence 00011235788999999987643 7889999999999999999999997
Q ss_pred CCChHHH-HHHHh--cCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 399 GENNEKT-LINIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 399 ~~~~~~~-~~~i~--~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....... ..... .....+|. . ...++++||.+||+.+|.+||++. |++.||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~li~~~l~~~p~~Rpt~~----~ll~~~~~ 268 (268)
T cd06624 213 ELGEPQAAMFKVGMFKIHPEIPE---S------LSAEAKNFILRCFEPDPDKRASAH----DLLQDPFL 268 (268)
T ss_pred cccChhhhHhhhhhhccCCCCCc---c------cCHHHHHHHHHHcCCCchhCCCHH----HHHhCCCC
Confidence 6543221 11111 11111111 1 122589999999999999999998 99999997
No 244
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2e-41 Score=334.20 Aligned_cols=258 Identities=25% Similarity=0.385 Sum_probs=203.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|.+.+.||+|+||.||++.... +++.||+|.+..... .....+..|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~ 89 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVA-----TGQEVAIKQMNLQQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGD 89 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcC-----CCCEEEEEEeccccc---hHHHHHHHHHHHHhhcCCCCeeehhheeeeCC
Confidence 3689999999999999999998775 567899999864322 22355677999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+|+||+++++|.+++... .+.... +..++.|++.||.|||++|++|
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~---~l~~~~----------------------------~~~i~~~l~~al~~LH~~gi~H 138 (293)
T cd06647 90 ELWVVMEYLAGGSLTDVVTET---CMDEGQ----------------------------IAAVCRECLQALEFLHSNQVIH 138 (293)
T ss_pred cEEEEEecCCCCcHHHHHhhc---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCEee
Confidence 999999999999999988653 122221 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.++|+|||++......
T Consensus 139 ~dL~p~Nili~~~~~~kL~dfg~~~~~~~~-------------------------------------------------- 168 (293)
T cd06647 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-------------------------------------------------- 168 (293)
T ss_pred ccCCHHHEEEcCCCCEEEccCcceeccccc--------------------------------------------------
Confidence 999999999999999999999987322110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.
T Consensus 169 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~ 220 (293)
T cd06647 169 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (293)
T ss_pred ----------------------------ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0011223588999999999888899999999999999999999999987765
Q ss_pred HHHHHHHhcCC-CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 403 EKTLINILKKP-LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 403 ~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
......+.... ..++. . ......+++||.+||+.+|++||++. +++.||||+...
T Consensus 221 ~~~~~~~~~~~~~~~~~---~----~~~~~~l~~li~~~l~~~p~~Rp~~~----~il~h~~~~~~~ 276 (293)
T cd06647 221 LRALYLIATNGTPELQN---P----EKLSAIFRDFLNRCLEMDVEKRGSAK----ELLQHPFLKIAK 276 (293)
T ss_pred hhheeehhcCCCCCCCC---c----cccCHHHHHHHHHHccCChhhCcCHH----HHhcCHHHhcCc
Confidence 54433332221 11111 0 01223589999999999999999998 999999998643
No 245
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.1e-41 Score=335.19 Aligned_cols=268 Identities=26% Similarity=0.358 Sum_probs=195.7
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+++. +++.||||.+...... ......+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 84 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKK-----TKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKA 84 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECC-----CCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEeccc
Confidence 4689999999999999999999886 6789999988643211 112233456999999999999999999886543
Q ss_pred --------eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 163 --------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 163 --------~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
..|+||||+. ++|.+++.... ..+++.. ++.++.||+.||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~----------------------------~~~i~~qi~~al~~ 134 (310)
T cd07865 85 TPYNRYKGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSE----------------------------IKKVMKMLLNGLYY 134 (310)
T ss_pred ccccCCCceEEEEEcCCC-cCHHHHHHhcc-cCCCHHH----------------------------HHHHHHHHHHHHHH
Confidence 4599999995 58887775432 1222222 23678999999999
Q ss_pred HHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
||++|++||||||+||+++.++.+||+|||++.........
T Consensus 135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------- 175 (310)
T cd07865 135 IHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------------- 175 (310)
T ss_pred HHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc---------------------------------------
Confidence 99999999999999999999999999999998543211000
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG 393 (517)
.........++..|+|||.+.+.. ++.++|||||||++|+|++|
T Consensus 176 -----------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~ 220 (310)
T cd07865 176 -----------------------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR 220 (310)
T ss_pred -----------------------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC
Confidence 000112335788999999987754 78899999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCCCCCCCCCCCC-------------------ch----hHHhhhhHHHHHHHhccCCcccccC
Q 010140 394 TTPFKGENNEKTLINILKKPLTFPRIGVSS-------------------SK----EFEEVVKLQDLISKLLVKNPKKRIG 450 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~-------------------~~----~~~~~~~l~dLi~~~L~~dP~~R~t 450 (517)
..||.+.+.......+.......+....+. .. .......+.+||.+||..||.+||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t 300 (310)
T cd07865 221 SPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID 300 (310)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC
Confidence 999988766544333322111111000000 00 0011235789999999999999999
Q ss_pred CCCChHHhhcCCCc
Q 010140 451 SLKGSVEIKRHEFF 464 (517)
Q Consensus 451 ~~~~~~ell~hp~f 464 (517)
++ |+++||||
T Consensus 301 ~~----e~l~h~~f 310 (310)
T cd07865 301 AD----TALNHDFF 310 (310)
T ss_pred HH----HHhcCCCC
Confidence 98 99999998
No 246
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.7e-42 Score=335.81 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=203.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
+.|+..+.||+|+||.||+|.+.. .+..||+|++...... .....+.+|+.+++.++||||+++++++..++.
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNR-----TKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK 76 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcC-----CCeEEEEEEeccccch--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCc
Confidence 347788899999999999998876 5678999998744322 334567789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+++++|.+++... .+.... ++.++.||+.||.|||++|++|+
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~---~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~ivH~ 125 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKPG---PLEETY----------------------------IATILREILKGLDYLHSERKIHR 125 (277)
T ss_pred eEEEEEccCCCcHHHHhhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHhcCCeecc
Confidence 99999999999999887542 222221 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+||+++.++.++|+|||++..+....
T Consensus 126 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 155 (277)
T cd06642 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQ-------------------------------------------------- 155 (277)
T ss_pred CCChheEEEeCCCCEEEccccccccccCcc--------------------------------------------------
Confidence 999999999999999999999974322100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|+..|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 156 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 207 (277)
T cd06642 156 ----------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM 207 (277)
T ss_pred ----------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh
Confidence 0011235788999999999888999999999999999999999999876655
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCc
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~ 469 (517)
.....+..... +.... .....+.++|.+||+.+|++||++. ++++||||....+
T Consensus 208 ~~~~~~~~~~~--~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~ 261 (277)
T cd06642 208 RVLFLIPKNSP--PTLEG------QYSKPFKEFVEACLNKDPRFRPTAK----ELLKHKFITRYTK 261 (277)
T ss_pred hHHhhhhcCCC--CCCCc------ccCHHHHHHHHHHccCCcccCcCHH----HHHHhHHHHHHhh
Confidence 54444333221 11111 1223589999999999999999998 9999999976443
No 247
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.6e-41 Score=325.04 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=198.4
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++++.||+|+||.||+|++.+ +..+|+|.+...... ...+..|+.++++++||||+++++++....
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG------QYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQR 72 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC------CCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4679999999999999999998764 245999988754322 234667999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++|+|.+++..... .+.... +..++.||+.||+|||++|++|
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~~-~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHGK-RFQPSQ----------------------------LLEMCKDVCEGMAYLESKQFIH 123 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcCC-CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeec
Confidence 99999999999999998876422 222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||||+|||++.++.+||+|||+++......
T Consensus 124 ~dl~p~nili~~~~~~kl~d~g~~~~~~~~~------------------------------------------------- 154 (256)
T cd05113 124 RDLAARNCLVDDQGCVKVSDFGLSRYVLDDE------------------------------------------------- 154 (256)
T ss_pred cccCcceEEEcCCCCEEECCCccceecCCCc-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+
T Consensus 155 ----------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 206 (256)
T cd05113 155 ----------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN 206 (256)
T ss_pred ----------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC
Confidence 000011235678999999998889999999999999999998 999999888
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
..+....+........... . ...+++++.+||+.||.+||++. +++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~--~------~~~~~~li~~cl~~~p~~Rp~~~----~ll~~ 254 (256)
T cd05113 207 NSETVEKVSQGLRLYRPHL--A------SEKVYAIMYSCWHEKAEERPTFQ----QLLSS 254 (256)
T ss_pred HHHHHHHHhcCCCCCCCCC--C------CHHHHHHHHHHcCCCcccCCCHH----HHHHh
Confidence 7777777766543322111 1 12589999999999999999997 77654
No 248
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.1e-41 Score=336.05 Aligned_cols=264 Identities=27% Similarity=0.346 Sum_probs=200.9
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
.++|++.+.||.|+||.||+|+++. +++.+|+|.++..... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 77 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKK-----TGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSN 77 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECC-----CCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC
Confidence 4679999999999999999999876 5678999999754322 22233456799999999999999999998877
Q ss_pred -ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 162 -HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 162 -~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...|+||||++ ++|.+++..... .+.... ++.++.||+.||+|||++||
T Consensus 78 ~~~~~lv~e~~~-~~L~~~~~~~~~-~l~~~~----------------------------~~~i~~qi~~aL~~LH~~~i 127 (293)
T cd07843 78 LDKIYMVMEYVE-HDLKSLMETMKQ-PFLQSE----------------------------VKCLMLQLLSGVAHLHDNWI 127 (293)
T ss_pred CCcEEEEehhcC-cCHHHHHHhccC-CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCe
Confidence 89999999996 599888766431 222222 23678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||++..+....
T Consensus 128 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------------------- 160 (293)
T cd07843 128 LHRDLKTSNLLLNNRGILKICDFGLAREYGSPL----------------------------------------------- 160 (293)
T ss_pred eeccCCHHHEEECCCCcEEEeecCceeeccCCc-----------------------------------------------
Confidence 999999999999999999999999984432100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.......+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||..
T Consensus 161 -------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 161 -------------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred -------------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 0011235788999999987654 68999999999999999999999998
Q ss_pred CChHHHHHHHhcCCCC-----------CCCCC--------C-CCchhH---HhhhhHHHHHHHhccCCcccccCCCCChH
Q 010140 400 ENNEKTLINILKKPLT-----------FPRIG--------V-SSSKEF---EEVVKLQDLISKLLVKNPKKRIGSLKGSV 456 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~-----------~p~~~--------~-~~~~~~---~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ 456 (517)
....+.+.++...... .+... . .....+ .....+.+||.+||+.||++||++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~---- 285 (293)
T cd07843 210 KSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAE---- 285 (293)
T ss_pred CChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHH----
Confidence 8776665554321100 00000 0 000000 0234588999999999999999998
Q ss_pred HhhcCCCc
Q 010140 457 EIKRHEFF 464 (517)
Q Consensus 457 ell~hp~f 464 (517)
|++.||||
T Consensus 286 ell~~~~f 293 (293)
T cd07843 286 DALKHPYF 293 (293)
T ss_pred HHhcCCCC
Confidence 99999998
No 249
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5e-41 Score=335.07 Aligned_cols=260 Identities=21% Similarity=0.254 Sum_probs=195.8
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+...+|++.+.||+|+||.||+|++...... ....||+|++..... .....++..|+.+++.++||||+++++++..
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~ 80 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEK-VKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLT 80 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCc-cceeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence 3456899999999999999999997653221 234599999864321 2334567779999999999999999999876
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
. ..++|+||+++|+|.+++..... .++.. .+..++.||+.||+|||++||
T Consensus 81 ~-~~~~v~e~~~~g~l~~~l~~~~~-~~~~~----------------------------~~~~~~~qi~~~L~~LH~~~i 130 (316)
T cd05108 81 S-TVQLITQLMPFGCLLDYVREHKD-NIGSQ----------------------------YLLNWCVQIAKGMNYLEERRL 130 (316)
T ss_pred C-CceeeeecCCCCCHHHHHHhccc-cCCHH----------------------------HHHHHHHHHHHHHHHHHhcCe
Confidence 4 57899999999999998876421 12211 123678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.+......
T Consensus 131 iH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------------------- 165 (316)
T cd05108 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------------------- 165 (316)
T ss_pred eccccchhheEecCCCcEEEccccccccccCCCcc---------------------------------------------
Confidence 99999999999999999999999998543211000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 166 -------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 166 -------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred -------------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 00011234678999999999889999999999999999997 9999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
....+.. .+.......+.... ...++.++|.+||..||.+||++. +++.+
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~li~~cl~~~p~~Rps~~----~l~~~ 264 (316)
T cd05108 215 IPASEIS-SILEKGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFR----ELIIE 264 (316)
T ss_pred CCHHHHH-HHHhCCCCCCCCCC-------CCHHHHHHHHHHccCChhhCcCHH----HHHHH
Confidence 7665543 34333333332211 112489999999999999999997 55554
No 250
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.2e-41 Score=324.48 Aligned_cols=259 Identities=28% Similarity=0.448 Sum_probs=207.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|++|.||+|++.. +++.||+|++...... .....+..|+.++..++||||+++++++.....
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKP-----TGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGE 73 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcC-----CCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCe
Confidence 468999999999999999999987 6789999998765332 334667789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh-cCcee
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM-MGIVY 242 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-~~iiH 242 (517)
.|+||||+++++|.+++... ..++... ...++.||+.||+|||+ +|++|
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~----------------------------~~~~~~~l~~~l~~lh~~~~~~H 123 (264)
T cd06623 74 ISIVLEYMDGGSLADLLKKV--GKIPEPV----------------------------LAYIARQILKGLDYLHTKRHIIH 123 (264)
T ss_pred EEEEEEecCCCcHHHHHHHc--CCCCHHH----------------------------HHHHHHHHHHHHHHHhccCCCcc
Confidence 99999999999999998764 2222222 23678999999999999 99999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||+|+||+++.++.++|+|||++.......
T Consensus 124 ~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~------------------------------------------------- 154 (264)
T cd06623 124 RDIKPSNLLINSKGEVKIADFGISKVLENTL------------------------------------------------- 154 (264)
T ss_pred CCCCHHHEEECCCCCEEEccCccceecccCC-------------------------------------------------
Confidence 9999999999999999999999874322100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC-
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN- 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~- 401 (517)
.......|+..|+|||.+.+..++.++||||||+++|+|++|..||....
T Consensus 155 -----------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~ 205 (264)
T cd06623 155 -----------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ 205 (264)
T ss_pred -----------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc
Confidence 00113357889999999998889999999999999999999999998774
Q ss_pred --hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 402 --NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 402 --~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
..+....+...... ..... ..+..+.++|.+||..+|++||++. |+++||||+..+
T Consensus 206 ~~~~~~~~~~~~~~~~--~~~~~-----~~~~~l~~li~~~l~~~p~~R~~~~----~ll~~~~~~~~~ 263 (264)
T cd06623 206 PSFFELMQAICDGPPP--SLPAE-----EFSPEFRDFISACLQKDPKKRPSAA----ELLQHPFIKKAD 263 (264)
T ss_pred cCHHHHHHHHhcCCCC--CCCcc-----cCCHHHHHHHHHHccCChhhCCCHH----HHHhCHHHHhcc
Confidence 34444444432221 11111 0122589999999999999999998 999999998754
No 251
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5.2e-41 Score=326.39 Aligned_cols=253 Identities=26% Similarity=0.358 Sum_probs=196.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|+++. +++.||||.+.............+..|+.+++.++||||+++++++..++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLL-----DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecC-----CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence 579999999999999999999876 578899998875443334445677789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.++||||+++++|.+++...........+ ..+..++.||+.||.|||++|++|+
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~i~~~l~~LH~~~i~H~ 130 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPE--------------------------KTVWKYFVQLCSALEHMHSRRVMHR 130 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCH--------------------------HHHHHHHHHHHHHHHHHHHCCeecC
Confidence 99999999999999988653221111111 1223678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||++.......
T Consensus 131 dl~p~nili~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 160 (267)
T cd08229 131 DIKPANVFITATGVVKLGDLGLGRFFSSKT-------------------------------------------------- 160 (267)
T ss_pred CCCHHHEEEcCCCCEEECcchhhhccccCC--------------------------------------------------
Confidence 999999999999999999999874321100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh-
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN- 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~- 402 (517)
.......|+..|+|||.+.+..++.++|||||||++|+|++|..||.+...
T Consensus 161 ----------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 212 (267)
T cd08229 161 ----------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 212 (267)
T ss_pred ----------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch
Confidence 001234688999999999988899999999999999999999999976543
Q ss_pred -HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 403 -EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 403 -~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
......+.... .+..... .....+.+||.+||+.||++|||+.
T Consensus 213 ~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~ 256 (267)
T cd08229 213 LYSLCKKIEQCD--YPPLPSD-----HYSEELRQLVNMCINPDPEKRPDIT 256 (267)
T ss_pred HHHHhhhhhcCC--CCCCCcc-----cccHHHHHHHHHhcCCCcccCCCHH
Confidence 23333333221 1111111 1223589999999999999999997
No 252
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.9e-41 Score=324.16 Aligned_cols=249 Identities=24% Similarity=0.295 Sum_probs=197.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||+|+||.||+|.+.. .+.||+|.+..... ....+.+|+.++++++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~------~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNN------TTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTL 72 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecC------CeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEec
Confidence 456789999999999999999998754 36799999875432 23446679999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+.+|+||||+++++|.+++.......+.+.. +..++.|++.||.|||++||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i 124 (261)
T cd05068 73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQ----------------------------LIDMAAQVASGMAYLEAQNY 124 (261)
T ss_pred CCCeeeeeecccCCcHHHHHhccCCCCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCe
Confidence 99999999999999999998765433333322 23678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 158 (261)
T cd05068 125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIY---------------------------------------------- 158 (261)
T ss_pred eeccCCcceEEEcCCCCEEECCcceEEEccCCcc----------------------------------------------
Confidence 9999999999999999999999999854321000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||.+
T Consensus 159 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 207 (261)
T cd05068 159 -------------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG 207 (261)
T ss_pred -------------------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 00011123457999999998889999999999999999999 9999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+....+..+.... ..+... . ....+.+++.+||+.||.+||++.
T Consensus 208 ~~~~~~~~~~~~~~-~~~~~~-~------~~~~~~~li~~~l~~~P~~Rp~~~ 252 (261)
T cd05068 208 MTNAEVLQQVDQGY-RMPCPP-G------CPKELYDIMLDCWKEDPDDRPTFE 252 (261)
T ss_pred CCHHHHHHHHHcCC-CCCCCC-c------CCHHHHHHHHHHhhcCcccCCCHH
Confidence 88777776665432 111111 1 123589999999999999999997
No 253
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.1e-41 Score=325.04 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=200.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+++.... ....||||++..... ......+..|+.+++.++||||+++++++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGK--KEIDVAIKTLKAGSS--DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR 78 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCC--CcceEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC
Confidence 4689999999999999999999875311 356799999875432 223455677999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|.+++..... .+.... +..++.|++.||+|||++||+|
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~----------------------------~~~~~~~l~~~l~~Lh~~~i~H 129 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDG-KFTVGQ----------------------------LVGMLRGIASGMKYLSEMNYVH 129 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccC-CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999999876432 222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.++|+|||+++.+......
T Consensus 130 ~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 162 (266)
T cd05033 130 RDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT----------------------------------------------- 162 (266)
T ss_pred CCCCcceEEEcCCCCEEECccchhhcccccccc-----------------------------------------------
Confidence 999999999999999999999998543210000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
.......+++.|+|||.+.+..++.++|||||||++|+|++ |..||....
T Consensus 163 -----------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~ 213 (266)
T cd05033 163 -----------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred -----------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC
Confidence 00011235678999999998889999999999999999997 999998877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
..+....+..... .+... . .+..+.+|+.+||+.+|++||++. |++++
T Consensus 214 ~~~~~~~~~~~~~-~~~~~-~------~~~~l~~li~~cl~~~p~~Rp~~~----ei~~~ 261 (266)
T cd05033 214 NQDVIKAVEDGYR-LPPPM-D------CPSALYQLMLDCWQKDRNERPTFS----QIVST 261 (266)
T ss_pred HHHHHHHHHcCCC-CCCCC-C------CCHHHHHHHHHHcCCCcccCcCHH----HHHHH
Confidence 7776666654322 12111 1 123589999999999999999997 66553
No 254
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.1e-41 Score=327.56 Aligned_cols=267 Identities=19% Similarity=0.258 Sum_probs=201.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|.+.+.||+|+||.||+|.+...........||+|.+..... ......+..|+.+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 34578999999999999999999987532222457899998864321 1223456779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
....|+||||++|++|.+++......... ........+..++.||+.||+|||++++
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~-----------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~i 137 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPER-----------------------PSSLTMKDLLFCARDVAKGCKYLEENHF 137 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 99999999999999999998765321100 0011222334788999999999999999
Q ss_pred eeccCCCCceEEccCC---cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDG---HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 241 iHrDLKp~NILl~~~~---~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+||||||+|||++.++ .+||+|||+++.+.....
T Consensus 138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------- 174 (277)
T cd05036 138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASY------------------------------------------- 174 (277)
T ss_pred eecccchheEEEeccCCCcceEeccCccccccCCccc-------------------------------------------
Confidence 9999999999998655 699999999854311000
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~P 396 (517)
........++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 175 ---------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~p 221 (277)
T cd05036 175 ---------------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMP 221 (277)
T ss_pred ---------------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCC
Confidence 000111234568999999998889999999999999999996 9999
Q ss_pred CCCCChHHHHHHHhcCCC-CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 397 FKGENNEKTLINILKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
|.+.+..+....+..... ..|. ..+..+.++|.+||+.||++||++. ++++|
T Consensus 222 f~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~cl~~~p~~Rps~~----~vl~~ 274 (277)
T cd05036 222 YPGRTNQEVMEFVTGGGRLDPPK---------GCPGPVYRIMTDCWQHTPEDRPNFA----TILER 274 (277)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCC---------CCCHHHHHHHHHHcCCCcccCcCHH----HHHHH
Confidence 998877776665544321 1111 1123589999999999999999998 88876
No 255
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=310.41 Aligned_cols=268 Identities=23% Similarity=0.316 Sum_probs=203.3
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.++.++|++.++||+|||+.||+++... +.+.||+|.+.... .+..+...+|++..++++||||++++++..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s-----~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l 88 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLS-----TGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQL 88 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccC-----cccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence 4567899999999999999999999665 77899999987654 244567778999999999999999998774
Q ss_pred cC-----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 160 AS-----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 160 ~~-----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
.+ ...||+++|...|+|.+.++....+.-..++.+.+ .|+.+|++||++
T Consensus 89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL--------------------------~if~gic~gL~~ 142 (302)
T KOG2345|consen 89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQIL--------------------------WIFLGICRGLEA 142 (302)
T ss_pred HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHH--------------------------HHHHHHHHHHHH
Confidence 33 34899999999999999998766555444444433 677899999999
Q ss_pred HHhcC--ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccc
Q 010140 235 LHMMG--IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSH 312 (517)
Q Consensus 235 LH~~~--iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (517)
||+.. ++||||||.|||+.+++.++|.|||.+....- ......
T Consensus 143 lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i---~i~~~~-------------------------------- 187 (302)
T KOG2345|consen 143 LHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPI---QIEGSR-------------------------------- 187 (302)
T ss_pred HhccCCcccccCCCcceeEecCCCceEEEeccCccccce---EeechH--------------------------------
Confidence 99998 99999999999999999999999998743221 000000
Q ss_pred ccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---CCCccchHHHHHHHHHH
Q 010140 313 GKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYE 389 (517)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~~~~~~DiWSlGvil~e 389 (517)
.+... .++ ..-..|..|+|||.+.-+ ..+.++|||||||+||+
T Consensus 188 ------~a~~l-----------------------Qe~-----a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa 233 (302)
T KOG2345|consen 188 ------QALRL-----------------------QEW-----AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYA 233 (302)
T ss_pred ------HHHHH-----------------------HHH-----HHHhCCCcccCchheecccCcccccccchhhhhHHHHH
Confidence 00000 000 111368889999998654 35889999999999999
Q ss_pred HhhCCCCCCCCCh--HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 390 MLYGTTPFKGENN--EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 390 lltG~~Pf~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
|+.|..||+.... ..+...+...+..+|.... .+ ..+.+||..||+.||.+||++. +++.+
T Consensus 234 ~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~-ys------e~l~~lik~mlqvdP~qRP~i~----~ll~~ 296 (302)
T KOG2345|consen 234 MMFGESPFERIYQQGGSLALAVQNAQISIPNSSR-YS------EALHQLIKSMLQVDPNQRPTIP----ELLSK 296 (302)
T ss_pred HHHcCCcchHHhhcCCeEEEeeeccccccCCCCC-cc------HHHHHHHHHHhcCCcccCCCHH----HHHHH
Confidence 9999999974322 1122234455666666544 22 2489999999999999999997 77754
No 256
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-40 Score=329.88 Aligned_cols=278 Identities=19% Similarity=0.236 Sum_probs=207.8
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCC--CCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCcccee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPM--VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLY 155 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~ 155 (517)
..+..++|.+.+.||+|+||.||+|++.... .......||+|.+..... ......+.+|+.+++.+ +||||++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc--hHHHHHHHHHHHHHHhhccCCCchhee
Confidence 3456688999999999999999999864321 112346799999875422 23345677899999999 899999999
Q ss_pred eeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
+++......|+||||+++|+|.+++............. .............+..++.||+.||.||
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~qi~~al~~L 153 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD--------------IARVPDEQMTFKDLVSCTYQVARGMEYL 153 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc--------------cccCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997653221111100 0011122333444567899999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 154 H~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~----------------------------------------- 192 (304)
T cd05101 154 ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY----------------------------------------- 192 (304)
T ss_pred HHCCeeecccccceEEEcCCCcEEECCCccceecccccc-----------------------------------------
Confidence 999999999999999999999999999999854321100
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GT 394 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~ 394 (517)
........+++.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus 193 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 237 (304)
T cd05101 193 -----------------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 237 (304)
T ss_pred -----------------------------------cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 000112246678999999998889999999999999999998 89
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 395 TPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.||.+.+..+....+........ .. .....+.+||.+||..+|.+||++. |+++
T Consensus 238 ~p~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~li~~cl~~~p~~Rps~~----e~l~ 291 (304)
T cd05101 238 SPYPGIPVEELFKLLKEGHRMDK--PA------NCTNELYMMMRDCWHAIPSHRPTFK----QLVE 291 (304)
T ss_pred CCcccCCHHHHHHHHHcCCcCCC--CC------CCCHHHHHHHHHHcccChhhCCCHH----HHHH
Confidence 99998887777766654432111 11 1223589999999999999999997 6654
No 257
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.7e-41 Score=333.98 Aligned_cols=272 Identities=21% Similarity=0.258 Sum_probs=199.0
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 158 (517)
.+..++|++.+.||+|+||.||+|.++... ....+|+|.+.... .......+.+|+.++.++ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~---~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~ 77 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGAC 77 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCC---ceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 356689999999999999999999987521 12346777765321 123345667799999999 899999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
..++..|+||||+++|+|.+++.............. ............++.++.||+.||+|||++
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~--------------~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 143 (303)
T cd05088 78 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI--------------ANSTASTLSSQQLLHFAADVARGMDYLSQK 143 (303)
T ss_pred CCCCCceEEEEeCCCCcHHHHHHhcccccccccccc--------------cccccCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999876432111000000 000001122233457899999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||+||||||+|||++.++.+||+|||+++....
T Consensus 144 gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~----------------------------------------------- 176 (303)
T cd05088 144 QFIHRDLAARNILVGENYVAKIADFGLSRGQEV----------------------------------------------- 176 (303)
T ss_pred CccccccchheEEecCCCcEEeCccccCcccch-----------------------------------------------
Confidence 999999999999999999999999998731100
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf 397 (517)
........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 177 --------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 224 (303)
T cd05088 177 --------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 224 (303)
T ss_pred --------------------------------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCc
Confidence 000011124667999999988889999999999999999998 99999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
.+.+..+....+.... .... ... ....+.+||.+||+.+|++||++. +++.+
T Consensus 225 ~~~~~~~~~~~~~~~~-~~~~-~~~------~~~~~~~li~~~l~~~p~~Rp~~~----~il~~ 276 (303)
T cd05088 225 CGMTCAELYEKLPQGY-RLEK-PLN------CDDEVYDLMRQCWREKPYERPSFA----QILVS 276 (303)
T ss_pred ccCChHHHHHHHhcCC-cCCC-CCC------CCHHHHHHHHHHcCCChhhCcCHH----HHHHH
Confidence 8877776665554321 1111 111 123589999999999999999998 66654
No 258
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.8e-40 Score=321.79 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=202.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|.+.+.||+|+||.||+|.... +++.||+|++...... ......+..|+.+++.++|+||+++++.+...+.+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLD-----TGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECC-----CCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEE
Confidence 58999999999999999999876 5788999998765433 34567788899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
++|+||+++++|.+++.... .+..... +.++.|++.||.|||++||+|+|
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~----------------------------~~i~~~i~~~l~~lh~~~i~H~d 124 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHGR--ILDEHVI----------------------------RVYTLQLLEGLAYLHSHGIVHRD 124 (264)
T ss_pred EEEEecCCCCcHHHHHhhcC--CCChHHH----------------------------HHHHHHHHHHHHHHHHCCcccCC
Confidence 99999999999999886532 2222222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.+||+|||++.........
T Consensus 125 l~~~nil~~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------------- 155 (264)
T cd06626 125 IKPANIFLDHNGVIKLGDFGCAVKLKNNTTT------------------------------------------------- 155 (264)
T ss_pred CCHHHEEECCCCCEEEcccccccccCCCCCc-------------------------------------------------
Confidence 9999999999999999999998443211000
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC---CCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~---~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.........|++.|+|||++.+.. ++.++|||||||++|+|++|..||....
T Consensus 156 -------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~ 210 (264)
T cd06626 156 -------------------------MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD 210 (264)
T ss_pred -------------------------ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc
Confidence 000012245788999999998776 7899999999999999999999997664
Q ss_pred h-HHHHHHHhcC-CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 402 N-EKTLINILKK-PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 402 ~-~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
. ......+... ...+|... .....+.+||.+||+.||.+||++. +++.|||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~R~~~~----~i~~~~~~ 264 (264)
T cd06626 211 NEFQIMFHVGAGHKPPIPDSL-------QLSPEGKDFLDRCLESDPKKRPTAS----ELLQHPFV 264 (264)
T ss_pred chHHHHHHHhcCCCCCCCccc-------ccCHHHHHHHHHHccCCcccCCCHH----HHhcCCCC
Confidence 3 3333333322 12222211 1123488999999999999999998 99999996
No 259
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-40 Score=327.03 Aligned_cols=269 Identities=19% Similarity=0.234 Sum_probs=201.3
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
...+|.+.++||+|+||.||+|..........+..+|+|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH---HHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 3467999999999999999999875432233567899998865432 3345677799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||+++|+|.+++.............. ...........+..++.||+.||+|||++||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~ 144 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGE---------------DVAPGQLTLGQMLAIASQIASGMVYLASLHFV 144 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccc---------------cCCccccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 999999999999999999876532110000000 00011122334457889999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.+||+|||++........
T Consensus 145 H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 177 (280)
T cd05092 145 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY----------------------------------------------- 177 (280)
T ss_pred cccccHhhEEEcCCCCEEECCCCceeEcCCCce-----------------------------------------------
Confidence 999999999999999999999999743211000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
........+++.|+|||.+.+..++.++|||||||++|||++ |.+||...
T Consensus 178 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 228 (280)
T cd05092 178 -----------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL 228 (280)
T ss_pred -----------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC
Confidence 000112245788999999999889999999999999999998 99999887
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
...+....+......... .. .+..+.+||.+||+.||.+||++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~cl~~~P~~Rp~~~ 272 (280)
T cd05092 229 SNTEAIECITQGRELERP--RT------CPPEVYAIMQGCWQREPQQRMVIK 272 (280)
T ss_pred CHHHHHHHHHcCccCCCC--CC------CCHHHHHHHHHHccCChhhCCCHH
Confidence 777766666554321111 11 122489999999999999999997
No 260
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6.2e-41 Score=327.96 Aligned_cols=254 Identities=27% Similarity=0.425 Sum_probs=203.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
-|++++.||.|+||.||+|.+.. .+..||||++..... ......+.+|+.+++.++||||+++++++..++..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 77 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNR-----TQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 77 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECC-----CCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeE
Confidence 47889999999999999998876 568899999864422 23345677899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++++|.+++... .+.... +..++.|++.||.|||++|++|+|
T Consensus 78 ~lv~e~~~~~~l~~~i~~~---~~~~~~----------------------------~~~~~~~l~~~l~~lh~~~i~h~d 126 (277)
T cd06641 78 WIIMEYLGGGSALDLLEPG---PLDETQ----------------------------IATILREILKGLDYLHSEKKIHRD 126 (277)
T ss_pred EEEEEeCCCCcHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHccCCeecCC
Confidence 9999999999999887642 222221 236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++.......
T Consensus 127 l~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 155 (277)
T cd06641 127 IKAANVLLSEHGEVKLADFGVAGQLTDTQ--------------------------------------------------- 155 (277)
T ss_pred CCHHhEEECCCCCEEEeecccceecccch---------------------------------------------------
Confidence 99999999999999999999874322100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......|+..|+|||.+.+...+.++|+|||||++|+|++|..||.......
T Consensus 156 ---------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 208 (277)
T cd06641 156 ---------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK 208 (277)
T ss_pred ---------------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH
Confidence 00122357889999999988888999999999999999999999998777665
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
....+..... +..... ...++.++|.+||..+|.+||++. ++++||||..
T Consensus 209 ~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~l~~~p~~Rp~~~----~~l~~~~~~~ 258 (277)
T cd06641 209 VLFLIPKNNP--PTLEGN------YSKPLKEFVEACLNKEPSFRPTAK----ELLKHKFIVR 258 (277)
T ss_pred HHHHHhcCCC--CCCCcc------cCHHHHHHHHHHccCChhhCcCHH----HHHhCHHHhh
Confidence 5555543322 111111 123589999999999999999998 9999999975
No 261
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-40 Score=322.19 Aligned_cols=255 Identities=30% Similarity=0.448 Sum_probs=201.9
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH--HHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+|+..+.||+|+||.||+|.... +++.|++|.+..... ........+.+|+.+++.++||||+++++++.++.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLD-----DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcC-----CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC
Confidence 47788999999999999999875 568899998864321 11234566778999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|+||||+++++|.+++.... .+.... +..++.||+.||+|||++||+|
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~H 125 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG--SFPEPV----------------------------IRLYTRQILLGLEYLHDRNTVH 125 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999887642 222221 1357899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||+|+||+++.++.+||+|||++.......
T Consensus 126 ~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------------------------- 156 (258)
T cd06632 126 RDIKGANILVDTNGVVKLADFGMAKQVVEFS------------------------------------------------- 156 (258)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeccccc-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
......|++.|+|||.+.... ++.++|+|||||++|+|++|..||....
T Consensus 157 ------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 157 ------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred ------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 012345889999999998776 8999999999999999999999998776
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.......+.... ..+..... ....+.+||.+||..+|.+||++. +++.|||+
T Consensus 207 ~~~~~~~~~~~~-~~~~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~----~~l~~~~~ 258 (258)
T cd06632 207 GVAAVFKIGRSK-ELPPIPDH------LSDEAKDFILKCLQRDPSLRPTAA----ELLEHPFV 258 (258)
T ss_pred HHHHHHHHHhcc-cCCCcCCC------cCHHHHHHHHHHhhcCcccCcCHH----HHhcCCCC
Confidence 555555544311 11111111 123589999999999999999998 99999996
No 262
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.6e-41 Score=334.40 Aligned_cols=271 Identities=25% Similarity=0.320 Sum_probs=195.9
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--c
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--H 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~ 162 (517)
+|++.+.||+|+||.||+|.+... ..++.||+|++.............+.+|+.+++.++||||+++++++.+. .
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNG---KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCC---CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc
Confidence 489999999999999999998752 14678999999864322223345566799999999999999999999888 8
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCcc-CccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRF-GISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
.+|+||||++ ++|.+++........ .+.+ ..++.++.||+.||+|||+++|+
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~--------------------------~~~~~i~~qi~~~l~~lH~~~i~ 130 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQAKRVSIPP--------------------------SMVKSLLWQILNGVHYLHSNWVL 130 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccCCCcCcCH--------------------------HHHHHHHHHHHHHHHHHHhCCEe
Confidence 8999999995 577776654322111 1111 12246789999999999999999
Q ss_pred eccCCCCceEEcc----CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 242 YRDLKPENVLVRE----DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 242 HrDLKp~NILl~~----~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||||||+|||++. ++.+||+|||+++.+......
T Consensus 131 h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 168 (316)
T cd07842 131 HRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP------------------------------------------ 168 (316)
T ss_pred eCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc------------------------------------------
Confidence 9999999999999 899999999998543211000
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~P 396 (517)
........+++.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 169 ---------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 169 ---------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred ---------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 0011234688999999998774 478999999999999999999999
Q ss_pred CCCCChHH---------HHHHHhcC-----------------------CCCCCCCCCCCchhH-----HhhhhHHHHHHH
Q 010140 397 FKGENNEK---------TLINILKK-----------------------PLTFPRIGVSSSKEF-----EEVVKLQDLISK 439 (517)
Q Consensus 397 f~~~~~~~---------~~~~i~~~-----------------------~~~~p~~~~~~~~~~-----~~~~~l~dLi~~ 439 (517)
|.+..... .+..++.. ..............+ ....++.++|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 295 (316)
T cd07842 216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295 (316)
T ss_pred CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence 98654322 11111110 000000000000000 123458899999
Q ss_pred hccCCcccccCCCCChHHhhcCCCc
Q 010140 440 LLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 440 ~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
||+.||++||++. |+++||||
T Consensus 296 ~l~~~P~~Rps~~----eil~~~~f 316 (316)
T cd07842 296 LLEYDPTKRITAE----EALEHPYF 316 (316)
T ss_pred HhcCCcccCcCHH----HHhcCCCC
Confidence 9999999999998 99999998
No 263
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.1e-41 Score=338.78 Aligned_cols=294 Identities=19% Similarity=0.239 Sum_probs=202.5
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
+.+..++|++.+.||+|+||.||+|.+.......+++.||||+++.... ......+.+|+.+|.++ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 3456688999999999999999999876543333678899999975422 12345677799999999 78999999998
Q ss_pred eec-CceeEEEEEecCCCchhHHHHhCCCCccCccchhh-----------hhhhhhhhhh--------cCCcc-------
Q 010140 158 FEA-SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKF-----------VFFLLFFFFY--------NNLGF------- 210 (517)
Q Consensus 158 ~~~-~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~-----------~~~~l~~~~~--------~~~~~------- 210 (517)
+.. +..+|+|||||++|+|.+++............... +...+..... ...++
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 754 45789999999999999998764321110000000 0000000000 00000
Q ss_pred -----------ccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCc
Q 010140 211 -----------VHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 279 (517)
Q Consensus 211 -----------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~ 279 (517)
..........+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~----- 234 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----- 234 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-----
Confidence 0001223445567999999999999999999999999999999999999999999843211000
Q ss_pred chHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCC
Q 010140 280 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 359 (517)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 359 (517)
........+
T Consensus 235 -----------------------------------------------------------------------~~~~~~~~~ 243 (343)
T cd05103 235 -----------------------------------------------------------------------YVRKGDARL 243 (343)
T ss_pred -----------------------------------------------------------------------hhhcCCCCC
Confidence 000112235
Q ss_pred CCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHH
Q 010140 360 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLIS 438 (517)
Q Consensus 360 t~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~ 438 (517)
+..|+|||++.+..++.++|||||||++|+|++ |..||.+......+..........+.... . ..++.+++.
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~ 316 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY-T------TPEMYQTML 316 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCC-C------CHHHHHHHH
Confidence 678999999998889999999999999999996 99999876544333333322222111111 1 124899999
Q ss_pred HhccCCcccccCCCCChHHhhcC
Q 010140 439 KLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 439 ~~L~~dP~~R~t~~~~~~ell~h 461 (517)
+||+.||++||++. ||++|
T Consensus 317 ~cl~~~p~~Rps~~----eil~~ 335 (343)
T cd05103 317 DCWHGEPSQRPTFS----ELVEH 335 (343)
T ss_pred HHccCChhhCcCHH----HHHHH
Confidence 99999999999998 77765
No 264
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=361.26 Aligned_cols=263 Identities=23% Similarity=0.320 Sum_probs=211.8
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..+..++.+.||+|+||.||.|...+.........||||.+++.. .......|.+|..+|+.++|||||+++|++-+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 4467889999999999999999999875443335569999987653 23566788899999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
....+|++|||+||||..+|+......+.. ..+...++..++.||++|+.||+++++
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~-----------------------~~L~~~dLl~~a~dvA~G~~YLe~~~f 823 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQP-----------------------SNLSMRDLLAFALDVAKGMNYLESKHF 823 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCC-----------------------CCCCHHHHHHHHHHHhhhhHHHHhCCC
Confidence 999999999999999999998865444332 122334455889999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
|||||..+|+||+....|||+|||+|+.+.....+
T Consensus 824 vHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yy--------------------------------------------- 858 (1025)
T KOG1095|consen 824 VHRDLAARNCLLDERRVVKIADFGLARDIYDKDYY--------------------------------------------- 858 (1025)
T ss_pred cCcchhhhheeecccCcEEEcccchhHhhhhchhe---------------------------------------------
Confidence 99999999999999999999999999633211110
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......-...|||||.+....++.|+|||||||+|||+++ |..||.+
T Consensus 859 -------------------------------r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~ 907 (1025)
T KOG1095|consen 859 -------------------------------RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS 907 (1025)
T ss_pred -------------------------------eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC
Confidence 00001123457999999999889999999999999999997 9999999
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.++.+++..++.+..-.++..++ ..+.+||..||+.+|++||++.
T Consensus 908 ~~n~~v~~~~~~ggRL~~P~~CP--------~~ly~lM~~CW~~~pe~RP~F~ 952 (1025)
T KOG1095|consen 908 RSNFEVLLDVLEGGRLDPPSYCP--------EKLYQLMLQCWKHDPEDRPSFR 952 (1025)
T ss_pred cchHHHHHHHHhCCccCCCCCCC--------hHHHHHHHHHccCChhhCccHH
Confidence 99999998777665222222222 2488999999999999999997
No 265
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.4e-41 Score=329.31 Aligned_cols=262 Identities=27% Similarity=0.389 Sum_probs=199.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||.|++|.||+|++.. +++.||||++...... .....+..|+.+++.++||||+++++++.+.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRT-----TGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKL 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEECC-----CCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcE
Confidence 58999999999999999999876 6788999998754321 2234455699999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCC-CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 165 CLVMEYCPGGDLYAARQRQPG-KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
|+||||++ ++|.+++..... ..+.+.. .+.++.||+.||+|||++||+||
T Consensus 74 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~qi~~~l~~lH~~~i~h~ 124 (284)
T cd07836 74 MLVFEYMD-KDLKKYMDTHGVRGALDPNT----------------------------VKSFTYQLLKGIAFCHENRVLHR 124 (284)
T ss_pred EEEEecCC-ccHHHHHHhcCCCCCcCHHH----------------------------HHHHHHHHHHHHHHHHHCCeeeC
Confidence 99999996 588888765431 1222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||+++.....
T Consensus 125 dl~p~ni~~~~~~~~~l~d~g~~~~~~~~--------------------------------------------------- 153 (284)
T cd07836 125 DLKPQNLLINKRGELKLADFGLARAFGIP--------------------------------------------------- 153 (284)
T ss_pred CCCHHHEEECCCCcEEEeecchhhhhcCC---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
........+++.|++||++.+. .++.++|||||||++|+|++|..||.+.+.
T Consensus 154 ---------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 206 (284)
T cd07836 154 ---------------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN 206 (284)
T ss_pred ---------------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 0001123578899999998764 478999999999999999999999998877
Q ss_pred HHHHHHHhcCCC------------------CCCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 403 EKTLINILKKPL------------------TFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 403 ~~~~~~i~~~~~------------------~~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
.+....+..... .++......... ......+.++|.+||+.||.+||++. ++++||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~----~~l~~~ 282 (284)
T cd07836 207 EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH----DALQHP 282 (284)
T ss_pred HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH----HHhcCC
Confidence 666555432110 000000000000 01234688999999999999999997 999999
Q ss_pred Cc
Q 010140 463 FF 464 (517)
Q Consensus 463 ~f 464 (517)
||
T Consensus 283 ~f 284 (284)
T cd07836 283 WF 284 (284)
T ss_pred CC
Confidence 98
No 266
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-40 Score=331.27 Aligned_cols=277 Identities=20% Similarity=0.238 Sum_probs=202.6
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCC--CCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVG--LPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYA 156 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~ 156 (517)
.+..++|.+.+.||+|+||.||+|++.+.... .....+|+|++..... ......+..|+.+++.+ +||||+++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 34457899999999999999999987642211 1345799999975421 12345567799999999 7999999999
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
++...+..|+||||+++|+|.+++............ +.............+..++.||+.||+|||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~--------------~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH 157 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCY--------------NPTQVPEEQLSFKDLVSCAYQVARGMEYLA 157 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCccccccc--------------ccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999765322110000 000001112233345678999999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++|++||||||+|||++.++.+||+|||+++.......
T Consensus 158 ~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~------------------------------------------ 195 (307)
T cd05098 158 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------------------------------------ 195 (307)
T ss_pred HCCcccccccHHheEEcCCCcEEECCCcccccccccch------------------------------------------
Confidence 99999999999999999999999999999843221000
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~ 395 (517)
........+++.|+|||++.+..++.++|||||||++|||++ |..
T Consensus 196 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~ 241 (307)
T cd05098 196 ----------------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 241 (307)
T ss_pred ----------------------------------hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence 000111234578999999998889999999999999999998 899
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
||.+....+....+..... .+ .... ...++.+||.+||..+|.+||++. ++++
T Consensus 242 p~~~~~~~~~~~~~~~~~~-~~-~~~~------~~~~~~~li~~~l~~~p~~Rps~~----evl~ 294 (307)
T cd05098 242 PYPGVPVEELFKLLKEGHR-MD-KPSN------CTNELYMMMRDCWHAVPSQRPTFK----QLVE 294 (307)
T ss_pred CCCcCCHHHHHHHHHcCCC-CC-CCCc------CCHHHHHHHHHHcccChhhCcCHH----HHHH
Confidence 9988776666655544321 11 1111 123589999999999999999997 5554
No 267
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.9e-41 Score=327.93 Aligned_cols=257 Identities=25% Similarity=0.458 Sum_probs=201.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC---CCCccceeeeeecC
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD---HPFLPTLYAEFEAS 161 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~ 161 (517)
.|++.+.||+|+||.||+|.+.. +++.||+|++..... ......+.+|+.+++.++ ||||+++++++..+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~-----~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVP-----TGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcC-----CCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 48889999999999999999876 678999999864321 123445667999999986 99999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
...|+||||++|++|.+++... .++... +..++.||+.||.|||+.||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~---~l~~~~----------------------------~~~i~~~i~~~l~~lh~~~i~ 123 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKAG---PIAEKY----------------------------ISVIIREVLVALKYIHKVGVI 123 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHcc---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999887542 222222 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||+|+||+++.++.++|+|||++.......
T Consensus 124 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~------------------------------------------------ 155 (277)
T cd06917 124 HRDIKAANILVTNTGNVKLCDFGVAALLNQNS------------------------------------------------ 155 (277)
T ss_pred cCCcCHHHEEEcCCCCEEEccCCceeecCCCc------------------------------------------------
Confidence 99999999999999999999999884332100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
.......|+..|+|||.+.+. .++.++|||||||++|+|++|..||.+.
T Consensus 156 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 156 ------------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred ------------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 011233688999999998754 4789999999999999999999999887
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
........+.... .+..... ....++.++|.+||+.||++||++. +++.||||+...
T Consensus 206 ~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~i~~~l~~~p~~R~~~~----~il~~~~~~~~~ 262 (277)
T cd06917 206 DAFRAMMLIPKSK--PPRLEDN-----GYSKLLREFVAACLDEEPKERLSAE----ELLKSKWIKAHS 262 (277)
T ss_pred ChhhhhhccccCC--CCCCCcc-----cCCHHHHHHHHHHcCCCcccCcCHH----HHhhChHhhccc
Confidence 6554443332221 1111111 0223589999999999999999998 999999997654
No 268
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-40 Score=327.89 Aligned_cols=264 Identities=27% Similarity=0.403 Sum_probs=201.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|.++. +++.||+|+++..... ......+.+|+.+++.++|+||+++++++..++.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~-----~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKA-----TGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCC-----CCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCE
Confidence 479999999999999999999886 5688999998754321 2334567789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++++.|..+.... ..+.... +..++.||+.||.|||++||+||
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~--~~~~~~~----------------------------~~~~~~~i~~~l~~LH~~~i~H~ 124 (288)
T cd07833 75 LYLVFEYVERTLLELLEASP--GGLPPDA----------------------------VRSYIWQLLQAIAYCHSHNIIHR 124 (288)
T ss_pred EEEEEecCCCCHHHHHHhcC--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeecC
Confidence 99999999887666554332 2222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+||+++.++.+||+|||++........
T Consensus 125 dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~------------------------------------------------- 155 (288)
T cd07833 125 DIKPENILVSESGVLKLCDFGFARALRARPA------------------------------------------------- 155 (288)
T ss_pred CCCHHHeEECCCCCEEEEeeecccccCCCcc-------------------------------------------------
Confidence 9999999999999999999999843221000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+...
T Consensus 156 ----------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 207 (288)
T cd07833 156 ----------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207 (288)
T ss_pred ----------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 011234688999999999888 789999999999999999999999987766
Q ss_pred HHHHHHHhcCCCC-------------------CCCCCCCCch--hH--HhhhhHHHHHHHhccCCcccccCCCCChHHhh
Q 010140 403 EKTLINILKKPLT-------------------FPRIGVSSSK--EF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK 459 (517)
Q Consensus 403 ~~~~~~i~~~~~~-------------------~p~~~~~~~~--~~--~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell 459 (517)
.+.+..+...... ++........ .+ ..+.++.+||.+||..+|++||++. +++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~----~il 283 (288)
T cd07833 208 IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD----ELL 283 (288)
T ss_pred HHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHH----HHh
Confidence 5544433221100 0000000000 00 1134689999999999999999998 999
Q ss_pred cCCCc
Q 010140 460 RHEFF 464 (517)
Q Consensus 460 ~hp~f 464 (517)
+||||
T Consensus 284 ~~~~f 288 (288)
T cd07833 284 QHPYF 288 (288)
T ss_pred cCCCC
Confidence 99998
No 269
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.2e-41 Score=331.80 Aligned_cols=257 Identities=26% Similarity=0.357 Sum_probs=201.5
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
....|.+.+.||+|+||.||+|+... .++.||+|++.............+.+|+.+++.++||||+++++++.++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVR-----TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcC-----CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence 34679999999999999999999876 5788999998644322234445677899999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+..|+||||++ |+|.+++.... ..+... .+..++.||+.||.|||++||+
T Consensus 88 ~~~~lv~e~~~-g~l~~~~~~~~-~~l~~~----------------------------~~~~~~~ql~~~L~~LH~~~i~ 137 (307)
T cd06607 88 HTAWLVMEYCL-GSASDILEVHK-KPLQEV----------------------------EIAAICHGALQGLAYLHSHERI 137 (307)
T ss_pred CeEEEEHHhhC-CCHHHHHHHcc-cCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCce
Confidence 99999999996 57777665432 122221 1236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||+|+||+++.++.++|+|||++.....
T Consensus 138 H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-------------------------------------------------- 167 (307)
T cd06607 138 HRDIKAGNILLTEPGTVKLADFGSASLVSP-------------------------------------------------- 167 (307)
T ss_pred ecCCCcccEEECCCCCEEEeecCcceecCC--------------------------------------------------
Confidence 999999999999999999999998732110
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc---CCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~---~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.....|++.|+|||++. ...++.++|||||||++|||++|..||.
T Consensus 168 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 168 --------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred --------------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 11235788999999985 3457889999999999999999999998
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
+.+.......+...... ..... .....+.+||.+||..||++||++. +++.||||..
T Consensus 216 ~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~ 272 (307)
T cd06607 216 NMNAMSALYHIAQNDSP--TLSSN-----DWSDYFRNFVDSCLQKIPQDRPSSE----ELLKHRFVLR 272 (307)
T ss_pred CccHHHHHHHHhcCCCC--CCCch-----hhCHHHHHHHHHHhcCChhhCcCHH----HHhcChhhcc
Confidence 87766655555433211 11100 1223589999999999999999998 9999999975
No 270
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.4e-40 Score=322.79 Aligned_cols=248 Identities=24% Similarity=0.297 Sum_probs=193.6
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.++||+|+||.||+|++.. . ..||+|++..... ....+.+|+.+++.++||||+++++.+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-----~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 72 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNG-----T-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecC-----C-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC
Confidence 445789999999999999999998764 2 4599999975432 12456779999999999999999998754
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...|+||||+++|+|.+++.......+++... ..++.|++.||+|||++||
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~~l~~aL~~lH~~~i 123 (262)
T cd05071 73 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL----------------------------VDMAAQIASGMAYVERMNY 123 (262)
T ss_pred -CCcEEEEEcCCCCcHHHHHhhccccCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCc
Confidence 56899999999999999987643322322222 3678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.++|+|||.++.+.....
T Consensus 124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~---------------------------------------------- 157 (262)
T cd05071 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY---------------------------------------------- 157 (262)
T ss_pred cccccCcccEEEcCCCcEEeccCCceeecccccc----------------------------------------------
Confidence 9999999999999999999999999843321000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 158 -------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~ 206 (262)
T cd05071 158 -------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 206 (262)
T ss_pred -------------------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 00012246778999999988889999999999999999999 8999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
....+....+..... .+. .. .....+.+||.+||+.||++||++.
T Consensus 207 ~~~~~~~~~~~~~~~-~~~-~~------~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 207 MVNREVLDQVERGYR-MPC-PP------ECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred CChHHHHHHHhcCCC-CCC-cc------ccCHHHHHHHHHHccCCcccCCCHH
Confidence 877776666654321 111 11 1223589999999999999999986
No 271
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.4e-40 Score=319.20 Aligned_cols=256 Identities=32% Similarity=0.522 Sum_probs=207.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||.|+||.||+|.+.. +++.||+|++...... ......+..|+++++.++|||++++++.+..+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKS-----DGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcC-----CCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEE
Confidence 58999999999999999999876 5788999998754322 23344566799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCC--CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 165 CLVMEYCPGGDLYAARQRQPG--KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
++||||+++++|.+++..... ..++... +..++.||+.||.|||++|++|
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~----------------------------~~~i~~~i~~~l~~lh~~~~~H 126 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQ----------------------------ILDWFVQLCLALKYLHSRKILH 126 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhccCCCcCHHH----------------------------HHHHHHHHHHHHHHHHhCCEec
Confidence 999999999999998876531 2222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||+|+||+++.++.++|+|||++.......
T Consensus 127 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------- 157 (258)
T cd08215 127 RDIKPQNIFLTSNGLVKLGDFGISKVLSSTV------------------------------------------------- 157 (258)
T ss_pred ccCChHHeEEcCCCcEEECCccceeecccCc-------------------------------------------------
Confidence 9999999999999999999999874322100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......|++.|+|||.+.+..++.++||||+|+++|+|++|..||...+.
T Consensus 158 -----------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 208 (258)
T cd08215 158 -----------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL 208 (258)
T ss_pred -----------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence 011223688999999999988899999999999999999999999988877
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.+....+........ .... ...+.++|.+||..+|++||++. ++++||||
T Consensus 209 ~~~~~~~~~~~~~~~--~~~~------~~~~~~~i~~~l~~~p~~Rp~~~----~ll~~~~~ 258 (258)
T cd08215 209 LELALKILKGQYPPI--PSQY------SSELRNLVSSLLQKDPEERPSIA----QILQSPFI 258 (258)
T ss_pred HHHHHHHhcCCCCCC--CCCC------CHHHHHHHHHHcCCChhhCcCHH----HHhcCCCC
Confidence 776666655432211 1111 22589999999999999999998 99999997
No 272
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.6e-41 Score=324.10 Aligned_cols=248 Identities=25% Similarity=0.325 Sum_probs=198.4
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
...+|+++++||.|+||.||+|.++. ++.+|+|++...... ....+..|+.+++.++||||+++++++...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~------~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN------RVRVAIKILKSDDLL---KQQDFQKEVQALKRLRHKHLISLFAVCSVG 74 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC------CCcEEEEeccccchh---hHHHHHHHHHHHhcCCCcchhheeeeEecC
Confidence 34679999999999999999999874 467999998765432 234566799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
...|+||||+++|+|.+++.......+..... +.++.||+.||.|||++||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~~i~~al~~lH~~~i~ 126 (261)
T cd05148 75 EPVYIITELMEKGSLLAFLRSPEGQVLPVASL----------------------------IDMACQVAEGMAYLEEQNSI 126 (261)
T ss_pred CCeEEEEeecccCCHHHHHhcCCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCee
Confidence 99999999999999999987654333333222 36789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.+||+|||++.......
T Consensus 127 h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~------------------------------------------------ 158 (261)
T cd05148 127 HRDLAARNILVGEDLVCKVADFGLARLIKEDV------------------------------------------------ 158 (261)
T ss_pred ccccCcceEEEcCCceEEEccccchhhcCCcc------------------------------------------------
Confidence 99999999999999999999999984321100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 159 ------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~ 208 (261)
T cd05148 159 ------------------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM 208 (261)
T ss_pred ------------------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC
Confidence 00012235678999999998889999999999999999998 89999988
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+..+.+..+.... ..+... ..+..+.++|.+||+.||.+||++.
T Consensus 209 ~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~i~~~l~~~p~~Rpt~~ 252 (261)
T cd05148 209 NNHEVYDQITAGY-RMPCPA-------KCPQEIYKIMLECWAAEPEDRPSFK 252 (261)
T ss_pred CHHHHHHHHHhCC-cCCCCC-------CCCHHHHHHHHHHcCCCchhCcCHH
Confidence 8777777666432 111111 1123589999999999999999997
No 273
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.7e-40 Score=320.08 Aligned_cols=259 Identities=27% Similarity=0.418 Sum_probs=201.6
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH--HHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
.+|++.+.||+|+||.||+|++.. +++.||+|++.... .........+.+|+.++++++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDAD-----TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcC-----CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence 479999999999999999999876 67889999875321 11234456778899999999999999999998753
Q ss_pred --ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
..+++||||+++++|.+++.... .+.... .+.++.||+.||.|||++|
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~----------------------------~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENV----------------------------TRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCC
Confidence 56899999999999998886532 222222 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.++|+|||+++.......
T Consensus 127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 161 (264)
T cd06653 127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM--------------------------------------------- 161 (264)
T ss_pred EecCCCCHHHEEEcCCCCEEECccccccccccccc---------------------------------------------
Confidence 99999999999999999999999999843221000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.........|+..|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus 162 ------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 162 ------------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred ------------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 00011234688999999999988899999999999999999999999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
........++...... +..... ....+.++|.+||+ +|..||++. +++.|||.
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~p~~------~~~~~~~~i~~~l~-~~~~r~~~~----~~~~~~~~ 264 (264)
T cd06653 212 YEAMAAIFKIATQPTK-PMLPDG------VSDACRDFLKQIFV-EEKRRPTAE----FLLRHPFV 264 (264)
T ss_pred cCHHHHHHHHHcCCCC-CCCCcc------cCHHHHHHHHHHhc-CcccCccHH----HHhcCCCC
Confidence 7766665555433221 111111 11248999999999 579999998 99999984
No 274
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1e-40 Score=341.69 Aligned_cols=293 Identities=18% Similarity=0.216 Sum_probs=206.1
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~ 157 (517)
+.+..++|.+.+.||+|+||.||+|+++.......++.||+|+++..... .....+..|+.+|.++. |||||+++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 44556789999999999999999999865322235678999999754222 22345778999999997 9999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCc------cc-----------------------------------hhhh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGI------SS-----------------------------------AKFV 196 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~------~~-----------------------------------~~~~ 196 (517)
+...+..|+|||||++|+|.+++.......... .. ....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 999999999999999999999997643210000 00 0000
Q ss_pred h---------h---------h-hhhhh-h-------cCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 197 F---------F---------L-LFFFF-Y-------NNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 197 ~---------~---------~-l~~~~-~-------~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
. . . .+... . ...............+..|+.||+.||+|||+++|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 0 0 0 00000 0 00000011122344567789999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.+.....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~------------------------------------------------------- 294 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN------------------------------------------------------- 294 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------------------------------------
Confidence 9999999999999999843211000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 408 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~ 408 (517)
........|++.|+|||.+.+..++.++|||||||++|||++ |..||......+....
T Consensus 295 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~ 353 (401)
T cd05107 295 ---------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353 (401)
T ss_pred ---------------------cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence 000112357889999999998889999999999999999998 8999987666555444
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.+......+.. .. ...++.+||.+||..+|.+||++. +|++
T Consensus 354 ~~~~~~~~~~p-~~------~~~~l~~li~~cl~~~P~~RPs~~----ell~ 394 (401)
T cd05107 354 AIKRGYRMAKP-AH------ASDEIYEIMQKCWEEKFEIRPDFS----QLVH 394 (401)
T ss_pred HHHcCCCCCCC-CC------CCHHHHHHHHHHcCCChhHCcCHH----HHHH
Confidence 44333222111 11 123589999999999999999997 6654
No 275
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.8e-40 Score=324.07 Aligned_cols=268 Identities=20% Similarity=0.264 Sum_probs=205.2
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++++.||+|+||.||+|+.+........+.+++|.+..... ......+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 468999999999999999999987654444567899999865422 123456777999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++|+|.+++.......-. .............++.||+.||+|||++||+|
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~---------------------~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H 140 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEK---------------------LKPPPLSTKQKVALCTQIALGMDHLSNARFVH 140 (275)
T ss_pred cceEEEEecCCCcHHHHHHhccccccc---------------------ccccCCCHHHHHHHHHHHHHHHHHhhhcCccc
Confidence 999999999999999998765321100 00001111223467899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.++|+|||+++......
T Consensus 141 ~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~------------------------------------------------- 171 (275)
T cd05046 141 RDLAARNCLVSSQREVKVSLLSLSKDVYNSE------------------------------------------------- 171 (275)
T ss_pred CcCccceEEEeCCCcEEEcccccccccCccc-------------------------------------------------
Confidence 9999999999999999999999873211000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+..
T Consensus 172 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~ 223 (275)
T cd05046 172 ----------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS 223 (275)
T ss_pred ----------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc
Confidence 001112246778999999988888999999999999999998 889998877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
.......+......++... . .+..+.++|.+||..||.+||++. |++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~-~------~~~~l~~~i~~~l~~~p~~Rp~~~----~~l~~ 272 (275)
T cd05046 224 DEEVLNRLQAGKLELPVPE-G------CPSRLYKLMTRCWAVNPKDRPSFS----ELVSA 272 (275)
T ss_pred hHHHHHHHHcCCcCCCCCC-C------CCHHHHHHHHHHcCCCcccCCCHH----HHHHH
Confidence 7777776665554433221 1 122589999999999999999997 77653
No 276
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8e-41 Score=333.22 Aligned_cols=270 Identities=20% Similarity=0.289 Sum_probs=194.4
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEE
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 167 (517)
+++.+|.| |.||.++... +++.||||++...... ......+..|+.+++.++||||++++++|...+..|++
T Consensus 6 i~~~~~~~--~~v~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 77 (314)
T cd08216 6 IGKCFEDL--MIVHLAKHKP-----TNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVV 77 (314)
T ss_pred hhHhhcCC--ceEEEEEecC-----CCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEE
Confidence 34444444 4555555554 5688999998765222 23456788899999999999999999999999999999
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCC
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKP 247 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp 247 (517)
|||+++|+|.+++.......++... ++.++.||+.||+|||++||+||||||
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~----------------------------~~~~~~~l~~~L~~LH~~~ivH~dlk~ 129 (314)
T cd08216 78 SPLMAYGSCEDLLKTHFPEGLPELA----------------------------IAFILKDVLNALDYIHSKGFIHRSVKA 129 (314)
T ss_pred EeccCCCCHHHHHHHhcccCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeecCCCCc
Confidence 9999999999998765333333222 236789999999999999999999999
Q ss_pred CceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccc
Q 010140 248 ENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIR 327 (517)
Q Consensus 248 ~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (517)
+|||++.+|.+||+|||.+..........
T Consensus 130 ~Nili~~~~~~kl~d~~~~~~~~~~~~~~--------------------------------------------------- 158 (314)
T cd08216 130 SHILLSGDGKVVLSGLRYSVSMIKHGKRQ--------------------------------------------------- 158 (314)
T ss_pred ceEEEecCCceEEecCccceeeccccccc---------------------------------------------------
Confidence 99999999999999999874332100000
Q ss_pred cccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhhCCCCCCCCChHHH
Q 010140 328 EQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405 (517)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~ 405 (517)
...........++..|+|||++.+. .++.++||||+||++|||++|..||........
T Consensus 159 --------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~ 218 (314)
T cd08216 159 --------------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM 218 (314)
T ss_pred --------------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0000111234578899999999764 488999999999999999999999987665443
Q ss_pred HHHHhcCCCC-------CCCCC------------------CCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 406 LINILKKPLT-------FPRIG------------------VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 406 ~~~i~~~~~~-------~p~~~------------------~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
......+... .+... ...........++.+||.+||+.||++||++. ++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~ll~ 294 (314)
T cd08216 219 LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS----QLLN 294 (314)
T ss_pred HHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHH----HHhc
Confidence 3322221110 00000 00000111234688999999999999999998 9999
Q ss_pred CCCcCCCC
Q 010140 461 HEFFKGIN 468 (517)
Q Consensus 461 hp~f~~~~ 468 (517)
||||+.+.
T Consensus 295 ~p~~~~~~ 302 (314)
T cd08216 295 HSFFKQCK 302 (314)
T ss_pred CchHhhhc
Confidence 99998653
No 277
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.6e-41 Score=322.69 Aligned_cols=250 Identities=24% Similarity=0.323 Sum_probs=194.8
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++.+.||+|+||.||+|+++. +..+|+|++.+.... ...+..|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~------~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRG------KIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQR 72 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecC------CccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 3568999999999999999998753 457999998654321 234556999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||++|++|.+++..... .+.... +..++.||+.||+|||++||+|
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~----------------------------~~~i~~qi~~~l~~lH~~~i~H 123 (256)
T cd05059 73 PIFIVTEYMANGCLLNYLRERKG-KLGTEW----------------------------LLDMCSDVCEAMEYLESNGFIH 123 (256)
T ss_pred ceEEEEecCCCCCHHHHHHhccc-CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999998875432 222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.+||+|||+++......
T Consensus 124 ~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 154 (256)
T cd05059 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQ------------------------------------------------- 154 (256)
T ss_pred ccccHhhEEECCCCcEEECCcccceeccccc-------------------------------------------------
Confidence 9999999999999999999999874321000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+
T Consensus 155 ----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 206 (256)
T cd05059 155 ----------------------------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS 206 (256)
T ss_pred ----------------------------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC
Confidence 000011124567999999998889999999999999999998 899998877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
..+....+..... .+... . .+.++.+|+.+||..+|++||++. |+++
T Consensus 207 ~~~~~~~~~~~~~-~~~~~-~------~~~~~~~li~~cl~~~p~~Rpt~~----~~l~ 253 (256)
T cd05059 207 NSEVVESVSAGYR-LYRPK-L------APTEVYTIMYSCWHEKPEDRPAFK----KLLS 253 (256)
T ss_pred HHHHHHHHHcCCc-CCCCC-C------CCHHHHHHHHHHhcCChhhCcCHH----HHHH
Confidence 7776666654321 11111 1 122589999999999999999997 7765
No 278
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-40 Score=322.03 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=195.0
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
++..++|+++++||+|+||.||+|..+. ++.||+|.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~------~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 71 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYNG------HTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT 71 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecCC------CceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc
Confidence 3556789999999999999999998653 46799999875432 2345667999999999999999999875
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.+..|+||||+++++|.+++.......+..... ..++.|++.||+|||+.|
T Consensus 72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~i~~~i~~al~~LH~~~ 122 (260)
T cd05067 72 -QEPIYIITEYMENGSLVDFLKTPEGIKLTINKL----------------------------IDMAAQIAEGMAFIERKN 122 (260)
T ss_pred -cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHH----------------------------HHHHHHHHHHHHHHhcCC
Confidence 457899999999999999887654333333222 367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
++||||||+||+++.++.++|+|||++.......
T Consensus 123 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 156 (260)
T cd05067 123 YIHRDLRAANILVSETLCCKIADFGLARLIEDNE---------------------------------------------- 156 (260)
T ss_pred eecccccHHhEEEcCCCCEEEccCcceeecCCCC----------------------------------------------
Confidence 9999999999999999999999999974322100
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||++.+..++.++|||||||++|||++ |++||.
T Consensus 157 -------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 205 (260)
T cd05067 157 -------------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYP 205 (260)
T ss_pred -------------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCC
Confidence 000112245678999999998889999999999999999998 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.+..+....+.... ..+... . .+.++.++|.+||+.+|++||++.
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~-~------~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05067 206 GMTNPEVIQNLERGY-RMPRPD-N------CPEELYELMRLCWKEKPEERPTFE 251 (260)
T ss_pred CCChHHHHHHHHcCC-CCCCCC-C------CCHHHHHHHHHHccCChhhCCCHH
Confidence 887766666554432 112111 1 122589999999999999999996
No 279
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-40 Score=328.96 Aligned_cols=273 Identities=19% Similarity=0.218 Sum_probs=202.2
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCC--CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMV--GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYA 156 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~--~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~ 156 (517)
.+..++|.+.+.||+|+||.||+|+..+... ......+|+|.+..... ......+..|+.+++.+ +||||+++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 4556789999999999999999998753211 12456799999875321 23345677799999999 6999999999
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
++..++..|+||||+++|+|.+++........... . ..............+..++.||+.||.|||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~--~------------~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH 151 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYT--F------------DITKVPEEQLSFKDLVSCAYQVARGMEYLE 151 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCccccc--c------------cccCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999976432111000 0 000111222334445678999999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+|||++.++.+||+|||+++.......
T Consensus 152 ~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------ 189 (314)
T cd05099 152 SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY------------------------------------------ 189 (314)
T ss_pred HCCeeeccccceeEEEcCCCcEEEcccccccccccccc------------------------------------------
Confidence 99999999999999999999999999999854321000
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~ 395 (517)
........++..|+|||++.+..++.++|||||||++|+|++ |..
T Consensus 190 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~ 235 (314)
T cd05099 190 ----------------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGS 235 (314)
T ss_pred ----------------------------------ccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCC
Confidence 000011124567999999998889999999999999999999 899
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
||.+....+.+..+...... ..... ...++.+||.+||..||++||++.
T Consensus 236 p~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~l~~li~~cl~~~p~~Rps~~ 284 (314)
T cd05099 236 PYPGIPVEELFKLLREGHRM--DKPSN------CTHELYMLMRECWHAVPTQRPTFK 284 (314)
T ss_pred CCCCCCHHHHHHHHHcCCCC--CCCCC------CCHHHHHHHHHHcCCCcccCcCHH
Confidence 99888777777666554321 11111 122589999999999999999987
No 280
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2e-40 Score=324.79 Aligned_cols=258 Identities=25% Similarity=0.388 Sum_probs=192.8
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecC--c
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS--H 162 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~--~ 162 (517)
|++.+.||+|+||.||+|+++. +++.||+|++....... . ......|+.++.++. ||||+++++++.++ +
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~-----~~~~~aik~~~~~~~~~-~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRK-----TGKYYAIKCMKKHFKSL-E-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTG 73 (282)
T ss_pred CceEeeccccccceEEEEEEcC-----CCcEEEEEEehhccCCc-h-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence 6789999999999999999876 67889999986542111 1 122345888888885 99999999999887 8
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+|+||||++ |+|.+.+.... ..+... .++.++.||+.||+|||++||+|
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~----------------------------~~~~~~~qi~~~L~~LH~~~i~H 123 (282)
T cd07831 74 RLALVFELMD-MNLYELIKGRK-RPLPEK----------------------------RVKSYMYQLLKSLDHMHRNGIFH 123 (282)
T ss_pred cEEEEEecCC-ccHHHHHHhcc-CCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCcee
Confidence 9999999996 58877776532 122222 22467899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++. +.+||+|||+++.....
T Consensus 124 ~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~-------------------------------------------------- 152 (282)
T cd07831 124 RDIKPENILIKD-DILKLADFGSCRGIYSK-------------------------------------------------- 152 (282)
T ss_pred cccCHHHEEEcC-CCeEEEecccccccccC--------------------------------------------------
Confidence 999999999999 99999999998432110
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||.+.+
T Consensus 153 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~ 203 (282)
T cd07831 153 -----------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN 203 (282)
T ss_pred -----------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC
Confidence 00112357889999998754 446889999999999999999999999877
Q ss_pred hHHHHHHHhcCC------------------CCCCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 402 NEKTLINILKKP------------------LTFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 402 ~~~~~~~i~~~~------------------~~~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
..+....+.... ..++......... ...+..+.+||.+||+.||++||++. ++++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~----~~l~~ 279 (282)
T cd07831 204 ELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK----QALRH 279 (282)
T ss_pred HHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH----HHhhC
Confidence 665544443211 0111110000000 01234689999999999999999998 99999
Q ss_pred CCc
Q 010140 462 EFF 464 (517)
Q Consensus 462 p~f 464 (517)
|||
T Consensus 280 ~~~ 282 (282)
T cd07831 280 PYF 282 (282)
T ss_pred CCC
Confidence 998
No 281
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.4e-40 Score=326.98 Aligned_cols=263 Identities=28% Similarity=0.426 Sum_probs=209.9
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..+.|++.+.||+|+||.||+|.+.. .+..||+|++..... ....+..|+.+++.++|+||+++++.+...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 87 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRA-----TGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVG 87 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEcc-----CCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence 45679999999999999999999876 567899999975532 345566799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
...|+|+||++|++|.+++.... ..+.... ...++.||+.||.|||++||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~----------------------------~~~i~~~i~~~L~~lH~~gi~ 138 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNF-VRMNEPQ----------------------------IAYVCREVLQGLEYLHSQNVI 138 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc-cCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999988753 1222222 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
|+||||+||+++.++.++|+|||++.......
T Consensus 139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~------------------------------------------------ 170 (286)
T cd06614 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEK------------------------------------------------ 170 (286)
T ss_pred eCCCChhhEEEcCCCCEEECccchhhhhccch------------------------------------------------
Confidence 99999999999999999999999873221100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 171 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 ------------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred ------------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 00122357889999999998889999999999999999999999999877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
.......+........... . .....+.+||.+||+.+|.+||++. +++.||||+...|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-~-----~~~~~l~~li~~~l~~~p~~Rpt~~----~il~~~~~~~~~~~ 279 (286)
T cd06614 221 PLRALFLITTKGIPPLKNP-E-----KWSPEFKDFLNKCLVKDPEKRPSAE----ELLQHPFLKKACPK 279 (286)
T ss_pred HHHHHHHHHhcCCCCCcch-h-----hCCHHHHHHHHHHhccChhhCcCHH----HHhhChHhhccCch
Confidence 7665555544322111111 0 0123589999999999999999998 99999999986553
No 282
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.2e-40 Score=318.52 Aligned_cols=250 Identities=48% Similarity=0.841 Sum_probs=205.2
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||.|+||.||+|.+.. .++.||+|++.+...........+..|+.+++.++||||+++++.++.+...|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKD-----TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECC-----CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence 6999999999999876 56889999998775544445667788999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
++++|.+++.... .++.... ..++.||+.||.|||+++++|+||||+||+
T Consensus 76 ~~~~L~~~l~~~~--~l~~~~~----------------------------~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~ 125 (250)
T cd05123 76 PGGELFSHLSKEG--RFSEERA----------------------------RFYAAEIVLALEYLHSLGIIYRDLKPENIL 125 (250)
T ss_pred CCCcHHHHHHhcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCceecCCCcceEE
Confidence 9999999887642 2222222 367899999999999999999999999999
Q ss_pred EccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 010140 252 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 331 (517)
Q Consensus 252 l~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (517)
++.++.++|+|||++.......
T Consensus 126 ~~~~~~~~l~d~~~~~~~~~~~---------------------------------------------------------- 147 (250)
T cd05123 126 LDADGHIKLTDFGLAKELSSEG---------------------------------------------------------- 147 (250)
T ss_pred EcCCCcEEEeecCcceecccCC----------------------------------------------------------
Confidence 9999999999999874322100
Q ss_pred CCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhc
Q 010140 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 411 (517)
.......|+..|+|||.+.+...+.++|+||||+++|+|++|..||...+.......+..
T Consensus 148 --------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 207 (250)
T cd05123 148 --------------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK 207 (250)
T ss_pred --------------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 012234588899999999988889999999999999999999999988877777777766
Q ss_pred CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 412 ~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....++... ...+.++|.+||..||++||++.. ++++++||||
T Consensus 208 ~~~~~~~~~---------~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 208 DPLRFPEFL---------SPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred CCCCCCCCC---------CHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence 544444332 124899999999999999999933 4499999998
No 283
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.2e-41 Score=336.93 Aligned_cols=263 Identities=29% Similarity=0.401 Sum_probs=201.2
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++++.||+|+||.||+|.+.. ++..||||++..... .......+..|+.+|+.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRR-----TGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECC-----CCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 4689999999999999999999876 678899999864321 1223345667999999999999999999997654
Q ss_pred ------eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 163 ------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 163 ------~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
..|+||||+ |++|..++... .+++.. ++.++.||+.||+|||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~l~~~~~~~---~l~~~~----------------------------~~~i~~qi~~al~~LH 135 (343)
T cd07880 88 SLDRFHDFYLVMPFM-GTDLGKLMKHE---KLSEDR----------------------------IQFLVYQMLKGLKYIH 135 (343)
T ss_pred cccccceEEEEEecC-CCCHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 459999999 88998877542 233222 2367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+||+++.++.++|+|||++.....
T Consensus 136 ~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~--------------------------------------------- 170 (343)
T cd07880 136 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS--------------------------------------------- 170 (343)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEeeccccccccc---------------------------------------------
Confidence 99999999999999999999999999999843210
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~ 395 (517)
......+++.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus 171 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~ 214 (343)
T cd07880 171 ------------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKP 214 (343)
T ss_pred ------------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 01123578899999999763 47899999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCC--------------------CCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFP--------------------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p--------------------~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
||.+.+....+..+.......+ ......... ......+.++|.+||+.||++|||+.
T Consensus 215 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~- 293 (343)
T cd07880 215 LFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAA- 293 (343)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHH-
Confidence 9998776655555443221111 000000000 01233588999999999999999998
Q ss_pred ChHHhhcCCCcCCCC
Q 010140 454 GSVEIKRHEFFKGIN 468 (517)
Q Consensus 454 ~~~ell~hp~f~~~~ 468 (517)
+++.||||+...
T Consensus 294 ---~~l~~~~~~~~~ 305 (343)
T cd07880 294 ---EALAHPYFEEFH 305 (343)
T ss_pred ---HHhcCccHhhhc
Confidence 999999999753
No 284
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.5e-41 Score=336.89 Aligned_cols=270 Identities=24% Similarity=0.320 Sum_probs=201.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee----
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE---- 159 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~---- 159 (517)
++|++.+.||+|+||.||+|.++. +++.||+|++...... ......+.+|+.+|++++||||++++++|.
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTR-----SGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcC-----CCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 689999999999999999999887 6789999998754221 223455667999999999999999999885
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.....|+||||+ +|+|.+++... ..++... ++.++.||+.||.|||++|
T Consensus 79 ~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~----------------------------~~~i~~qi~~aL~~LH~~~ 127 (334)
T cd07855 79 DFKDVYVVMDLM-ESDLHHIIHSD--QPLTEEH----------------------------IRYFLYQLLRGLKYIHSAN 127 (334)
T ss_pred CCceEEEEEehh-hhhHHHHhccC--CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCC
Confidence 345789999999 56898877543 2233222 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.+||+|||+++........
T Consensus 128 ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 163 (334)
T cd07855 128 VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-------------------------------------------- 163 (334)
T ss_pred eecCCCCHHHEEEcCCCcEEecccccceeecccCcC--------------------------------------------
Confidence 999999999999999999999999998433210000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.........|+..|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 164 ------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~ 213 (334)
T cd07855 164 ------------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP 213 (334)
T ss_pred ------------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence 0011123468999999999876 458999999999999999999999998
Q ss_pred CCChHHHHHHHhcCCCC--------------------CCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChH
Q 010140 399 GENNEKTLINILKKPLT--------------------FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSV 456 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~--------------------~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ 456 (517)
+.+....+..+...... ++......... .....++.++|.+||+.||.+||++.
T Consensus 214 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~---- 289 (334)
T cd07855 214 GKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVE---- 289 (334)
T ss_pred CCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHH----
Confidence 87655444333221100 00000000000 01234689999999999999999998
Q ss_pred HhhcCCCcCCCC
Q 010140 457 EIKRHEFFKGIN 468 (517)
Q Consensus 457 ell~hp~f~~~~ 468 (517)
+++.||||++..
T Consensus 290 ~~l~~~~~~~~~ 301 (334)
T cd07855 290 QALQHPFLAQYH 301 (334)
T ss_pred HHHhChhhhhcc
Confidence 999999998643
No 285
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-40 Score=321.79 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=194.1
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+..++|++.++||+|+||.||+|.... +..+|+|.+...... ...+.+|+.++++++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~------~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~ 71 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWNG------NTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS 71 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEecC------CceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC
Confidence 3456789999999999999999998763 356899998754321 234677999999999999999999885
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
....|+||||+++++|.+++.......+++.. .+.++.|++.||+|||++|
T Consensus 72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 72 -EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPN----------------------------LVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred -CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHH----------------------------HHHHHHHHHHHHHHHHHCC
Confidence 45689999999999999998764333333322 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.++|+|||++.......
T Consensus 123 i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 156 (260)
T cd05070 123 YIHRDLRSANILVGDGLVCKIADFGLARLIEDNE---------------------------------------------- 156 (260)
T ss_pred cccCCCccceEEEeCCceEEeCCceeeeeccCcc----------------------------------------------
Confidence 9999999999999999999999999984322100
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||.
T Consensus 157 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~ 205 (260)
T cd05070 157 -------------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 205 (260)
T ss_pred -------------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCC
Confidence 000111235668999999988889999999999999999999 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.+..+....+.... ..+... ..+..+.+||.+||..||.+|||+.
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~li~~~l~~~p~~Rpt~~ 251 (260)
T cd05070 206 GMNNREVLEQVERGY-RMPCPQ-------DCPISLHELMLQCWKKDPEERPTFE 251 (260)
T ss_pred CCCHHHHHHHHHcCC-CCCCCC-------cCCHHHHHHHHHHcccCcccCcCHH
Confidence 887777776665432 111111 1123589999999999999999996
No 286
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.8e-40 Score=320.07 Aligned_cols=253 Identities=27% Similarity=0.357 Sum_probs=196.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
++|++.+.||+|+||.||+|.... +++.||+|.++...........++.+|+.++++++|+||+++++++...+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLL-----DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcC-----CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence 689999999999999999999885 678899998875433333445677789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.++||||+++|+|..++............ ..+..++.||+.||.|||++||+||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~l~~lh~~~i~h~ 130 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPE--------------------------RTIWKYFVQLCSALEHMHSKRIMHR 130 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCH--------------------------HHHHHHHHHHHHHHHHHHhCCEecC
Confidence 99999999999999988654222111111 1224678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.++|+|||+++......
T Consensus 131 dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------------- 160 (267)
T cd08224 131 DIKPANVFITATGVVKLGDLGLGRFFSSKT-------------------------------------------------- 160 (267)
T ss_pred CcChhhEEECCCCcEEEeccceeeeccCCC--------------------------------------------------
Confidence 999999999999999999999874321100
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh-
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN- 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~- 402 (517)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.....
T Consensus 161 ----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 212 (267)
T cd08224 161 ----------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 212 (267)
T ss_pred ----------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc
Confidence 001223588899999999988899999999999999999999999975532
Q ss_pred -HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 403 -EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 403 -~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+....+..+.. +..... .....+.++|.+||..+|++||++.
T Consensus 213 ~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~i~~cl~~~p~~Rp~~~ 256 (267)
T cd08224 213 LYSLCKKIEKCDY--PPLPAD-----HYSEELRDLVSRCINPDPEKRPDIS 256 (267)
T ss_pred HHHHHhhhhcCCC--CCCChh-----hcCHHHHHHHHHHcCCCcccCCCHH
Confidence 233333333221 111110 1223589999999999999999997
No 287
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.7e-40 Score=325.33 Aligned_cols=276 Identities=21% Similarity=0.244 Sum_probs=202.1
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++++.||+|+||.||+|++.....+.++..||+|++..... ......+.+|+.++++++||||+++++++..+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 4578999999999999999999976432233568899999875432 12335577799999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccc-cccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFV-HTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...|+||||+++|+|.+++............... ....... .........+..++.||+.||+|||++|+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i 151 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHST---------SSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKF 151 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccc---------cccccccccccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 9999999999999999998764321110000000 0000000 00111223345789999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.++|+|||++........
T Consensus 152 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 185 (288)
T cd05050 152 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY---------------------------------------------- 185 (288)
T ss_pred ecccccHhheEecCCCceEECccccceecccCcc----------------------------------------------
Confidence 9999999999999999999999998743221000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 186 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 186 ------------------------------YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred ------------------------------ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 000111234567999999998889999999999999999997 8899988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
....+....+....... ... . .+.++.+||.+||+.||.+||++.
T Consensus 236 ~~~~~~~~~~~~~~~~~-~~~-~------~~~~l~~li~~~l~~~p~~Rpt~~ 280 (288)
T cd05050 236 MAHEEVIYYVRDGNVLS-CPD-N------CPLELYNLMRLCWSKLPSDRPSFA 280 (288)
T ss_pred CCHHHHHHHHhcCCCCC-CCC-C------CCHHHHHHHHHHcccCcccCCCHH
Confidence 88777777666544321 111 1 122589999999999999999997
No 288
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=319.92 Aligned_cols=136 Identities=27% Similarity=0.393 Sum_probs=116.3
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-----C---CCcc
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-----H---PFLP 152 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-----H---pnIv 152 (517)
+..++|.++++||.|.|++||+|.+.. ..+.||+|+++... ...+....|+.+|++++ | .+||
T Consensus 75 F~~gRY~v~rKLGWGHFSTVWLawDtq-----~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV 145 (590)
T KOG1290|consen 75 FNGGRYHVQRKLGWGHFSTVWLAWDTQ-----NKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVV 145 (590)
T ss_pred ccCceEEEEEeccccccceeEEEeecc-----CCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceee
Confidence 445899999999999999999999987 78999999998653 33445556999999982 3 3599
Q ss_pred ceeeeee----cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHH
Q 010140 153 TLYAEFE----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAET 228 (517)
Q Consensus 153 ~l~~~~~----~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi 228 (517)
+|++.|. ++.++|||+|++ |.+|..+|.....+.+++..++ .|++||
T Consensus 146 ~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK----------------------------~I~~qv 196 (590)
T KOG1290|consen 146 QLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVK----------------------------EICRQV 196 (590)
T ss_pred eeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHH----------------------------HHHHHH
Confidence 9999996 567999999999 9999999999887888776655 788999
Q ss_pred HHHHHHHHhc-CceeccCCCCceEEcc
Q 010140 229 LLALEYLHMM-GIVYRDLKPENVLVRE 254 (517)
Q Consensus 229 ~~aL~yLH~~-~iiHrDLKp~NILl~~ 254 (517)
+.||.|||.. ||||.||||+|||+..
T Consensus 197 L~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 197 LTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHhcCccccCCCcceeeeec
Confidence 9999999975 9999999999999954
No 289
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.8e-40 Score=319.39 Aligned_cols=243 Identities=23% Similarity=0.314 Sum_probs=191.5
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee-e
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF-E 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-~ 159 (517)
+..++|++.+.||+|+||.||++... +..||+|.+.... ....+.+|+.++++++|+||+++++++ .
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc-------CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEc
Confidence 45578999999999999999999765 3668999986542 234566799999999999999999975 4
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.++..|+||||+++++|.+++.......+..... ..++.||+.||+|||++|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL----------------------------LKFSLDVCEAMEYLEANN 122 (256)
T ss_pred CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCC
Confidence 5667899999999999999987653322222222 367889999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.+||+|||+++....
T Consensus 123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~------------------------------------------------ 154 (256)
T cd05082 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS------------------------------------------------ 154 (256)
T ss_pred EeccccchheEEEcCCCcEEecCCccceeccc------------------------------------------------
Confidence 99999999999999999999999998742210
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
......++..|+|||++.+..++.++|||||||++|+|++ |+.||.
T Consensus 155 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~ 201 (256)
T cd05082 155 ---------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred ---------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 0011234567999999998889999999999999999997 999998
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.....+....+...... .... ..+..+.++|.+||+.||++||++.
T Consensus 202 ~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~li~~~l~~~p~~Rpt~~ 247 (256)
T cd05082 202 RIPLKDVVPRVEKGYKM--DAPD------GCPPVVYDVMKQCWHLDAATRPSFL 247 (256)
T ss_pred CCCHHHHHHHHhcCCCC--CCCC------CCCHHHHHHHHHHhcCChhhCcCHH
Confidence 87776666665443211 1111 1123589999999999999999997
No 290
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.2e-40 Score=335.37 Aligned_cols=265 Identities=23% Similarity=0.301 Sum_probs=198.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-- 161 (517)
++|.+.+.||+|+||+||+|++.. +++.||||.+...... .....++..|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSE-----TNEKVAIKKIANAFDN-RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecC-----CCCeEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence 579999999999999999999876 6789999998653211 22334556799999999999999999988644
Q ss_pred ---ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 162 ---HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 162 ---~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
...|+||||+ +++|.+++... ..+.+... +.++.||+.||.|||++
T Consensus 79 ~~~~~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~----------------------------~~i~~qi~~aL~~LH~~ 127 (337)
T cd07858 79 EAFNDVYIVYELM-DTDLHQIIRSS--QTLSDDHC----------------------------QYFLYQLLRGLKYIHSA 127 (337)
T ss_pred cccCcEEEEEeCC-CCCHHHHHhcC--CCCCHHHH----------------------------HHHHHHHHHHHHHHHhC
Confidence 3589999999 57898887653 23333332 36789999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
+++||||||+|||++.++.+||+|||+++......
T Consensus 128 ~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------- 162 (337)
T cd07858 128 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG--------------------------------------------- 162 (337)
T ss_pred CEecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------------------------------------
Confidence 99999999999999999999999999984322100
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
.......|+..|+|||.+.+ ..++.++|||||||++|+|++|++||
T Consensus 163 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 209 (337)
T cd07858 163 ---------------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLF 209 (337)
T ss_pred ---------------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCC
Confidence 01123357889999999875 45899999999999999999999999
Q ss_pred CCCChHHHHHHHhcCCCC--------------------CCCCCCCC--chhHHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 398 KGENNEKTLINILKKPLT--------------------FPRIGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~--------------------~p~~~~~~--~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
.+.+.......+...... .+...... ........++.+||.+||+.||++||++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~--- 286 (337)
T cd07858 210 PGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVE--- 286 (337)
T ss_pred CCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHH---
Confidence 876544333322210000 00000000 00012334689999999999999999997
Q ss_pred HHhhcCCCcCCC
Q 010140 456 VEIKRHEFFKGI 467 (517)
Q Consensus 456 ~ell~hp~f~~~ 467 (517)
++++||||+.+
T Consensus 287 -ell~h~~~~~~ 297 (337)
T cd07858 287 -EALAHPYLASL 297 (337)
T ss_pred -HHHcCcchhhh
Confidence 99999999865
No 291
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.3e-40 Score=322.71 Aligned_cols=260 Identities=20% Similarity=0.238 Sum_probs=195.3
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce--
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY-- 163 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~-- 163 (517)
|.+.+.||+|+||.||+|....... ....||+|.+..+... ......+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~--~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 77 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDG--SQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ 77 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCC--CcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc
Confidence 5788999999999999998865321 3578999998754222 2334567789999999999999999998765443
Q ss_pred ----eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 164 ----SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 164 ----~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.++||||+++|+|..++.......... ......+..++.|++.||+|||++|
T Consensus 78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~------------------------~~~~~~~~~~~~~i~~aL~~lH~~~ 133 (273)
T cd05035 78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPE------------------------KLPLQTLLKFMVDIALGMEYLSNRN 133 (273)
T ss_pred cCcccEEEEeccCCCCHHHHHHHhhccCCcc------------------------cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 799999999999998885532111000 0111223467899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.+||+|||+++.......
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 168 (273)
T cd05035 134 FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY--------------------------------------------- 168 (273)
T ss_pred eeccccchheEEECCCCeEEECCccceeecccccc---------------------------------------------
Confidence 99999999999999999999999999853321000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |.+||.
T Consensus 169 -------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~ 217 (273)
T cd05035 169 -------------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYP 217 (273)
T ss_pred -------------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 000111235678999999988889999999999999999999 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+....+.+..+....... .... ...++.++|.+||+.||++||++. |+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~li~~~l~~~p~~Rp~~~----e~~~ 267 (273)
T cd05035 218 GVENHEIYDYLRHGNRLK--QPED------CLDELYDLMYSCWRADPKDRPTFT----KLRE 267 (273)
T ss_pred CCCHHHHHHHHHcCCCCC--CCcC------CCHHHHHHHHHHcCCChhhCcCHH----HHHH
Confidence 888777776666543211 1111 223589999999999999999997 6654
No 292
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4e-40 Score=319.04 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=198.8
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+..++|++.+.||+|+||.||+|...+ .+.||||.+..... ....+..|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~------~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWNG------TTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCS 71 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEcC------CceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeee
Confidence 3567899999999999999999998764 36689999875432 2245667999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.....|+||||+++++|.+++.......+..... +.++.||+.||.|||++|
T Consensus 72 ~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~----------------------------~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 72 EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQL----------------------------VDMAAQIAEGMAYLESRN 123 (261)
T ss_pred cCCceEEEEeccCCCCHHHHHhccccCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCC
Confidence 9899999999999999999987654333333322 367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+|+||||+||+++.++.+||+|||+++.+....
T Consensus 124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~---------------------------------------------- 157 (261)
T cd05034 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDE---------------------------------------------- 157 (261)
T ss_pred cccCCcchheEEEcCCCCEEECccccceeccchh----------------------------------------------
Confidence 9999999999999999999999999984432100
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |+.||.
T Consensus 158 -------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 206 (261)
T cd05034 158 -------------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYP 206 (261)
T ss_pred -------------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 000011124568999999998889999999999999999998 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+......+..+..... .+... . .+.++.+++.+||..||++||++.
T Consensus 207 ~~~~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~i~~~l~~~p~~Rp~~~ 252 (261)
T cd05034 207 GMTNREVLEQVERGYR-MPRPP-N------CPEELYDLMLQCWDKDPEERPTFE 252 (261)
T ss_pred CCCHHHHHHHHHcCCC-CCCCC-C------CCHHHHHHHHHHcccCcccCCCHH
Confidence 8887777777765421 11111 1 122589999999999999999996
No 293
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2e-40 Score=334.67 Aligned_cols=261 Identities=27% Similarity=0.342 Sum_probs=198.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
.++|.+.+.||+|+||.||+|.+.. +++.||+|++.+.... ......+.+|+.++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTK-----TGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcC-----CCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 3789999999999999999999876 6788999998754322 22345566799999999999999999988643
Q ss_pred -----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
...|++++++ |++|.+++... .+.... ++.++.||+.||+|||
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~----------------------------~~~i~~qi~~aL~~LH 137 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDH----------------------------VQFLIYQILRGLKYIH 137 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 3478999988 88998876542 233222 2367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+||+++.++.+||+|||+++....
T Consensus 138 ~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~--------------------------------------------- 172 (345)
T cd07877 138 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--------------------------------------------- 172 (345)
T ss_pred HCCeeecCCChHHEEEcCCCCEEEecccccccccc---------------------------------------------
Confidence 99999999999999999999999999998732110
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~ 395 (517)
......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.
T Consensus 173 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~ 216 (345)
T cd07877 173 ------------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 216 (345)
T ss_pred ------------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCC
Confidence 0122357889999999876 457899999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCC--------------------CCCCch--hHHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPRI--------------------GVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~--------------------~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
||.+.+....+..+.......+.. ...... ......++.+||.+||+.||.+||++.
T Consensus 217 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~- 295 (345)
T cd07877 217 LFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA- 295 (345)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHH-
Confidence 998776655544443211100000 000000 001233588999999999999999997
Q ss_pred ChHHhhcCCCcCC
Q 010140 454 GSVEIKRHEFFKG 466 (517)
Q Consensus 454 ~~~ell~hp~f~~ 466 (517)
+++.||||+.
T Consensus 296 ---e~l~h~~f~~ 305 (345)
T cd07877 296 ---QALAHAYFAQ 305 (345)
T ss_pred ---HHhcChhhhh
Confidence 9999999985
No 294
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.2e-40 Score=318.16 Aligned_cols=243 Identities=22% Similarity=0.282 Sum_probs=186.6
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|+++. +++.||+|.+..... ......+.+|+.+++.++||||+++++++......|+|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 73 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRA-----DNTPVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 73 (252)
T ss_pred CccCcccCccEEEEEEec-----CCceEEEEecCccCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEe
Confidence 369999999999999976 578899998764321 2233567779999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++++|.+++.... ..+.+.. +..++.|++.||+|||++||+||||||+|
T Consensus 74 ~~~~~~L~~~~~~~~-~~~~~~~----------------------------~~~~~~qi~~~L~~lH~~~i~H~dl~p~n 124 (252)
T cd05084 74 LVQGGDFLTFLRTEG-PRLKVKE----------------------------LIQMVENAAAGMEYLESKHCIHRDLAARN 124 (252)
T ss_pred eccCCcHHHHHHhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCccccccchhe
Confidence 999999999886532 1222222 23678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||++........
T Consensus 125 il~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------------- 149 (252)
T cd05084 125 CLVTEKNVLKISDFGMSREEEDGVY------------------------------------------------------- 149 (252)
T ss_pred EEEcCCCcEEECccccCcccccccc-------------------------------------------------------
Confidence 9999999999999999742210000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 408 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~ 408 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...........
T Consensus 150 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~ 208 (252)
T cd05084 150 ---------------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREA 208 (252)
T ss_pred ---------------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHH
Confidence 000001123457999999998889999999999999999997 9999987776665555
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+..... .+. ... .+..+.+|+.+||+.||++||++.
T Consensus 209 ~~~~~~-~~~-~~~------~~~~~~~li~~~l~~~p~~Rps~~ 244 (252)
T cd05084 209 IEQGVR-LPC-PEL------CPDAVYRLMERCWEYDPGQRPSFS 244 (252)
T ss_pred HHcCCC-CCC-ccc------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 544321 111 111 122589999999999999999997
No 295
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-40 Score=326.26 Aligned_cols=262 Identities=27% Similarity=0.377 Sum_probs=198.8
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
|++.+.||.|++|.||+|.++. ++..||+|++..+... ......+..|+.+++.++||||+++++++.+++..|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKL-----TGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcC-----CCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEE
Confidence 6788999999999999999876 6788999998754221 122345667999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+||||+ +++|.+++.......+..... ..++.||+.||+|||+++++||||
T Consensus 75 iv~e~~-~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~i~~~L~~lH~~~~~H~dl 125 (283)
T cd07835 75 LVFEFL-DLDLKKYMDSSPLTGLDPPLI----------------------------KSYLYQLLQGIAYCHSHRVLHRDL 125 (283)
T ss_pred EEEecc-CcCHHHHHhhCCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeeCCCC
Confidence 999999 568998887654322332222 367899999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
+|+||+++.++.++|+|||+++......
T Consensus 126 ~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------------------------------- 153 (283)
T cd07835 126 KPQNLLIDREGALKLADFGLARAFGVPV---------------------------------------------------- 153 (283)
T ss_pred CHHHEEEcCCCcEEEeecccccccCCCc----------------------------------------------------
Confidence 9999999999999999999974321100
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+...
T Consensus 154 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 207 (283)
T cd07835 154 --------------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID 207 (283)
T ss_pred --------------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001122468899999988765 47899999999999999999999998877655
Q ss_pred HHHHHhcCCCC------------------CCCCCCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKPLT------------------FPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~~~------------------~p~~~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.+.++...... ++........ .......+.++|.+||+.||.+||++. |++.||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~il~~~~~ 283 (283)
T cd07835 208 QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAK----AALQHPYF 283 (283)
T ss_pred HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHH----HHhcCCCC
Confidence 55444332110 0000000000 001123588999999999999999998 99999998
No 296
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.5e-40 Score=325.66 Aligned_cols=271 Identities=21% Similarity=0.282 Sum_probs=201.8
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCC-----------CCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVG-----------LPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF 150 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~-----------~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn 150 (517)
..++|++++.||+|+||.||+|++...... .....||+|.+...... .....+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCC
Confidence 456899999999999999999987653211 13467899998755322 34456778999999999999
Q ss_pred ccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHH
Q 010140 151 LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLL 230 (517)
Q Consensus 151 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 230 (517)
|+++++++..++..++||||+++++|.+++.......... ...........+..++.|++.
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~ 141 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL-------------------ACNSKSLSFSTLLYMATQIAS 141 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc-------------------cccCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987643211100 000011122334578899999
Q ss_pred HHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccc
Q 010140 231 ALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSV 310 (517)
Q Consensus 231 aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (517)
||+|||++||+||||||+||+++.++.++|+|||+++.......
T Consensus 142 al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------ 185 (296)
T cd05051 142 GMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY------------------------------------ 185 (296)
T ss_pred HHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc------------------------------------
Confidence 99999999999999999999999999999999999743221000
Q ss_pred ccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHH
Q 010140 311 SHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEM 390 (517)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~el 390 (517)
........+++.|+|||.+.+..++.++|||||||++|||
T Consensus 186 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 225 (296)
T cd05051 186 ----------------------------------------YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225 (296)
T ss_pred ----------------------------------------eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHH
Confidence 0011233567889999999988899999999999999999
Q ss_pred hh--CCCCCCCCChHHHHHHHhcC------CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 391 LY--GTTPFKGENNEKTLINILKK------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 391 lt--G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
++ |..||...+..+.+..+... ....+. .. ..+.++.+||.+||+.||++||++. |+++
T Consensus 226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~l~~li~~cl~~~p~~Rpt~~----el~~ 292 (296)
T cd05051 226 LTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPR-PP------NCPKDIYELMLECWRRDEEDRPTFR----EIHL 292 (296)
T ss_pred HhcCCCCCCCCcChHHHHHHHHhccccccccccCCC-cc------CCCHHHHHHHHHHhccChhcCCCHH----HHHH
Confidence 98 78899877766665555432 111111 10 1123589999999999999999997 6643
No 297
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.3e-40 Score=321.69 Aligned_cols=259 Identities=20% Similarity=0.248 Sum_probs=195.2
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++++.||+|+||+||+|++...... ....||+|++..... ......+..|+.++..++||||+++++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGEN-VKIPVAIKVLRENTS--PKANKEILDEAYVMAGVGSPYVCRLLGICLT 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCc-cceEEEEEEecCCCC--HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence 3457899999999999999999997653221 233589999864322 1234556779999999999999999998875
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...+++|||+++|+|.+++.... ..++.... ..++.||+.||+|||++||
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~----------------------------~~~~~qi~~~L~~lH~~~i 130 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDL----------------------------LNWCVQIAKGMSYLEEVRL 130 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCe
Confidence 45789999999999999886532 22333222 3678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.+......
T Consensus 131 iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------------------- 165 (279)
T cd05109 131 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------------------- 165 (279)
T ss_pred eccccccceEEEcCCCcEEECCCCceeecccccce---------------------------------------------
Confidence 99999999999999999999999998543211000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......+++.|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 166 -------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 166 -------------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred -------------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 00011235678999999998889999999999999999998 9999987
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.........+..... .+.. .. ...++.++|.+||+.||++||++. +++.
T Consensus 215 ~~~~~~~~~~~~~~~-~~~~-~~------~~~~~~~li~~~l~~dp~~Rp~~~----~l~~ 263 (279)
T cd05109 215 IPAREIPDLLEKGER-LPQP-PI------CTIDVYMIMVKCWMIDSECRPRFR----ELVD 263 (279)
T ss_pred CCHHHHHHHHHCCCc-CCCC-cc------CCHHHHHHHHHHcCCChhhCcCHH----HHHH
Confidence 766655554444322 1111 11 123589999999999999999997 6663
No 298
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.7e-40 Score=324.67 Aligned_cols=274 Identities=21% Similarity=0.228 Sum_probs=198.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+|.............+|+|.+...... ....++.+|+.+++.++||||+++++.+..++..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS--SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH--HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47899999999999999998865332223467999988754322 2345677799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCcc--chhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGIS--SAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
|+||||+.+|+|.+++........... ...... ...............+..++.|++.||+|||++||+|
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNS--------SYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCcccccccccccccc--------ccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 999999999999999875421110000 000000 0000000112233445678999999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||+++.......
T Consensus 151 ~dikp~nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 182 (290)
T cd05045 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDS------------------------------------------------ 182 (290)
T ss_pred hhhhhheEEEcCCCcEEeccccccccccCccc------------------------------------------------
Confidence 99999999999999999999999843221000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+..
T Consensus 183 ----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 183 ----------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred ----------------------------hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 000112245678999999988889999999999999999998 999998877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.......+... ...+... . ...++.+||.+||+.||++||++.
T Consensus 235 ~~~~~~~~~~~-~~~~~~~-~------~~~~~~~~i~~cl~~~P~~Rp~~~ 277 (290)
T cd05045 235 PERLFNLLKTG-YRMERPE-N------CSEEMYNLMLTCWKQEPDKRPTFA 277 (290)
T ss_pred HHHHHHHHhCC-CCCCCCC-C------CCHHHHHHHHHHccCCcccCCCHH
Confidence 76665544432 2222111 1 123589999999999999999997
No 299
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.3e-40 Score=330.30 Aligned_cols=279 Identities=19% Similarity=0.236 Sum_probs=204.9
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCC--CCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCcccee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVG--LPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLY 155 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~ 155 (517)
+.+...+|++++.||+|+||.||+|++...... .....||+|++..... ......+.+|+.+++++ +||||++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT--DKDLSDLVSEMEMMKMIGKHKNIINLL 84 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC--HHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence 445556899999999999999999987542211 1334789998875321 23345677799999999 899999999
Q ss_pred eeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
+++..++..|+||||+++|+|.+++............. .............+..++.||+.||+||
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~qi~~al~~L 150 (334)
T cd05100 85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFD--------------TCKLPEEQLTFKDLVSCAYQVARGMEYL 150 (334)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccc--------------cccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987643211100000 0001112222334457889999999999
Q ss_pred HhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|++||+||||||+|||++.++.+||+|||+++.......
T Consensus 151 H~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------- 189 (334)
T cd05100 151 ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY----------------------------------------- 189 (334)
T ss_pred HHCCeeccccccceEEEcCCCcEEECCcccceecccccc-----------------------------------------
Confidence 999999999999999999999999999999843321000
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GT 394 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~ 394 (517)
........++..|+|||++.+..++.++|||||||++|||++ |.
T Consensus 190 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 234 (334)
T cd05100 190 -----------------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 234 (334)
T ss_pred -----------------------------------cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCC
Confidence 000111234567999999999889999999999999999998 89
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 395 TPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
.||.+.+..+....+...... +. ... ...++.+||.+||+.+|++||++. |++++
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~~-~~-~~~------~~~~l~~li~~cl~~~p~~Rps~~----ell~~ 289 (334)
T cd05100 235 SPYPGIPVEELFKLLKEGHRM-DK-PAN------CTHELYMIMRECWHAVPSQRPTFK----QLVED 289 (334)
T ss_pred CCCCCCCHHHHHHHHHcCCCC-CC-CCC------CCHHHHHHHHHHcccChhhCcCHH----HHHHH
Confidence 999988877776666543221 11 111 122489999999999999999997 66654
No 300
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-41 Score=337.62 Aligned_cols=244 Identities=32% Similarity=0.478 Sum_probs=199.4
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA 160 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~ 160 (517)
..+.|.+...+|.|+||.|-.|.+.. +.+.+++|++.+.. .....|+.++... +||||+++.+++.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~-----t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSP-----TDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYED 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccc-----cccchhheeccccc-------cccccccchhhhhcCCCcceeecceecC
Confidence 46789999999999999999999887 67889999997662 1222377666665 79999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
+.+.|+|||++.|+-|.+.+...+.. . . +...|++||+.||.|||++||
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~~~~~~--~-~----------------------------e~~~w~~~lv~Av~~LH~~gv 436 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIRSKPEF--C-S----------------------------EASQWAAELVSAVDYLHEQGV 436 (612)
T ss_pred CceeeeeehhccccHHHHHHHhcchh--H-H----------------------------HHHHHHHHHHHHHHHHHhcCe
Confidence 99999999999999998877654211 1 1 223689999999999999999
Q ss_pred eeccCCCCceEE-ccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 241 VYRDLKPENVLV-REDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 241 iHrDLKp~NILl-~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|||||||+|||+ +..|+++|+|||.++....
T Consensus 437 vhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~------------------------------------------------ 468 (612)
T KOG0603|consen 437 VHRDLKPGNILLDGSAGHLRLTYFGFWSELER------------------------------------------------ 468 (612)
T ss_pred eecCCChhheeecCCCCcEEEEEechhhhCch------------------------------------------------
Confidence 999999999999 6899999999999843221
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
...+.+-|..|.|||++....|+.++||||||++||+|++|+.||..
T Consensus 469 ---------------------------------~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~ 515 (612)
T KOG0603|consen 469 ---------------------------------SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAA 515 (612)
T ss_pred ---------------------------------hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCcccc
Confidence 01223568899999999999999999999999999999999999987
Q ss_pred CChH-HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 400 ENNE-KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 400 ~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.... +++.++...... . ..+.+++|||.+||+.||.+|+++. +++.||||
T Consensus 516 ~P~~~ei~~~i~~~~~s-----~------~vS~~AKdLl~~LL~~dP~~Rl~~~----~i~~h~w~ 566 (612)
T KOG0603|consen 516 HPAGIEIHTRIQMPKFS-----E------CVSDEAKDLLQQLLQVDPALRLGAD----EIGAHPWF 566 (612)
T ss_pred CCchHHHHHhhcCCccc-----c------ccCHHHHHHHHHhccCChhhCcChh----hhccCcch
Confidence 7665 555555444322 1 1223589999999999999999998 99999999
No 301
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.1e-40 Score=326.75 Aligned_cols=256 Identities=27% Similarity=0.382 Sum_probs=200.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|...+.||+|+||.||+|++.. +++.||+|++.............+..|+.+++.++||||+++++++.+....
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 96 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSH-----TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA 96 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECC-----CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence 47778899999999999999876 6788999998754333234445677799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+. |+|.+++.... ..+... .+..++.||+.||.|||++||+|||
T Consensus 97 ~lv~e~~~-~~l~~~l~~~~-~~l~~~----------------------------~~~~~~~qi~~al~~LH~~gi~H~d 146 (313)
T cd06633 97 WLVMEYCL-GSASDLLEVHK-KPLQEV----------------------------EIAAITHGALQGLAYLHSHNMIHRD 146 (313)
T ss_pred EEEEecCC-CCHHHHHHhcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCeecCC
Confidence 99999995 57777765432 122221 1235789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.+||+|||++....
T Consensus 147 l~p~nili~~~~~~kL~dfg~~~~~~------------------------------------------------------ 172 (313)
T cd06633 147 IKAGNILLTEPGQVKLADFGSASKSS------------------------------------------------------ 172 (313)
T ss_pred CChhhEEECCCCCEEEeecCCCcccC------------------------------------------------------
Confidence 99999999999999999999872110
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc---CCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~---~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
......|+..|+|||++. ...++.++|||||||++|+|++|..||...+
T Consensus 173 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 173 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred ----------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 011235888999999984 3457889999999999999999999998877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
.......+...... ...... ....+++||.+||+.+|.+||++. ++++||||+..+
T Consensus 225 ~~~~~~~~~~~~~~--~~~~~~-----~~~~l~~li~~~l~~~P~~Rp~~~----~~l~~~~~~~~~ 280 (313)
T cd06633 225 AMSALYHIAQNDSP--TLQSNE-----WTDSFRGFVDYCLQKIPQERPASA----ELLRHDFVRRDR 280 (313)
T ss_pred hHHHHHHHHhcCCC--CCCccc-----cCHHHHHHHHHHccCChhhCcCHH----HHhcCcccCCCc
Confidence 66666555543221 111111 112489999999999999999998 999999998644
No 302
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.1e-40 Score=323.32 Aligned_cols=261 Identities=28% Similarity=0.383 Sum_probs=198.6
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc---CCCCccceeeeeecCc
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEASH 162 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~~~ 162 (517)
|++.+.||+|+||.||+|+++. +++.||+|++...... ......+..|+.+++++ +||||+++++++...+
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLN-----TGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECC-----CCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence 6889999999999999999876 5788999999743221 11223344577777666 6999999999998777
Q ss_pred e-----eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 163 Y-----SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 163 ~-----~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
. .|++|||+. ++|.+++.......+++.. ++.++.||+.||.|||+
T Consensus 75 ~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~----------------------------~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 75 TDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPET----------------------------IKDLMRQLLRGVDFLHS 125 (287)
T ss_pred CCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHH----------------------------HHHHHHHHHHHHHHHHH
Confidence 6 999999996 5898888764332333322 23678999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+|++|+||||+||+++.++.+||+|||++......
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------- 160 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE--------------------------------------------- 160 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCC---------------------------------------------
Confidence 99999999999999999999999999987432210
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
.......++..|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 161 ----------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~ 206 (287)
T cd07838 161 ----------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLF 206 (287)
T ss_pred ----------------------------------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcc
Confidence 0011234788999999999988999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCC-----CCCC-----------CCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChHHhh
Q 010140 398 KGENNEKTLINILKKP-----LTFP-----------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK 459 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~-----~~~p-----------~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell 459 (517)
.+....+.+.++.... ..++ ......... ......+.+||.+||+.||.+||++. +++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~----~il 282 (287)
T cd07838 207 RGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAF----EAL 282 (287)
T ss_pred cCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHH----HHh
Confidence 9888777766665321 0111 000000000 02234678999999999999999998 999
Q ss_pred cCCCc
Q 010140 460 RHEFF 464 (517)
Q Consensus 460 ~hp~f 464 (517)
+||||
T Consensus 283 ~~~~~ 287 (287)
T cd07838 283 QHPYF 287 (287)
T ss_pred cCcCC
Confidence 99998
No 303
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.6e-40 Score=326.08 Aligned_cols=254 Identities=27% Similarity=0.416 Sum_probs=199.3
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEE
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCL 166 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 166 (517)
....+||+|+||.||++..+. +++.||||.+..... .....+.+|+.+++.++|+||+++++.+..++..|+
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 94 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKS-----SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 94 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcC-----CCeEEEEEEecccch---hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEE
Confidence 334679999999999999876 678999998854321 234556779999999999999999999999999999
Q ss_pred EEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCC
Q 010140 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLK 246 (517)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 246 (517)
||||+++++|.+++... .+.... ++.++.|++.||+|||++|++|||||
T Consensus 95 v~e~~~~~~L~~~~~~~---~~~~~~----------------------------~~~~~~ql~~~l~~lH~~givH~dl~ 143 (292)
T cd06657 95 VMEFLEGGALTDIVTHT---RMNEEQ----------------------------IAAVCLAVLKALSVLHAQGVIHRDIK 143 (292)
T ss_pred EEecCCCCcHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 99999999998876542 222221 23678999999999999999999999
Q ss_pred CCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccc
Q 010140 247 PENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTI 326 (517)
Q Consensus 247 p~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (517)
|+||+++.++.++|+|||++......
T Consensus 144 p~Nilv~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 169 (292)
T cd06657 144 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------------------------------------ 169 (292)
T ss_pred HHHEEECCCCCEEEcccccceecccc------------------------------------------------------
Confidence 99999999999999999987322100
Q ss_pred ccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHH
Q 010140 327 REQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406 (517)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~ 406 (517)
........|++.|+|||.+.+..++.++|+||+||++|+|++|..||.+....+..
T Consensus 170 ------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~ 225 (292)
T cd06657 170 ------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 225 (292)
T ss_pred ------------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 00012235889999999998888899999999999999999999999887766555
Q ss_pred HHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 407 ~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
..+............ .....+.++|.+||+.||.+||++. +++.||||...
T Consensus 226 ~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~~P~~R~~~~----~ll~~~~~~~~ 276 (292)
T cd06657 226 KMIRDNLPPKLKNLH------KVSPSLKGFLDRLLVRDPAQRATAA----ELLKHPFLAKA 276 (292)
T ss_pred HHHHhhCCcccCCcc------cCCHHHHHHHHHHHhCCcccCcCHH----HHhcChHHhcc
Confidence 544332211111111 1123489999999999999999998 99999999853
No 304
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.1e-40 Score=325.53 Aligned_cols=263 Identities=21% Similarity=0.258 Sum_probs=195.0
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 162 (517)
++|++.+.||+|+||.||+|..+... ....+++|.++... .......+.+|+.++.++ +||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDG---LKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCC---CcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC
Confidence 68999999999999999999887631 12347888876321 112345567799999999 7999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++|+|.+++.............. ..+ .........++.++.||+.||+|||++||+|
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~------------~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 142 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAK------------EHG--TASTLTSQQLLQFASDVATGMQYLSEKQFIH 142 (297)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccc------------ccC--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999999876432111100000 000 0011223344578999999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.+||+|||++......
T Consensus 143 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-------------------------------------------------- 172 (297)
T cd05089 143 RDLAARNVLVGENLASKIADFGLSRGEEVY-------------------------------------------------- 172 (297)
T ss_pred CcCCcceEEECCCCeEEECCcCCCccccce--------------------------------------------------
Confidence 999999999999999999999987321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 173 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~ 223 (297)
T cd05089 173 -----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223 (297)
T ss_pred -----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 00001123457999999998889999999999999999997 999999888
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..+....+..+... +. ... ....+.+||.+||+.||.+||+++
T Consensus 224 ~~~~~~~~~~~~~~-~~-~~~------~~~~~~~li~~~l~~~p~~Rp~~~ 266 (297)
T cd05089 224 CAELYEKLPQGYRM-EK-PRN------CDDEVYELMRQCWRDRPYERPPFA 266 (297)
T ss_pred HHHHHHHHhcCCCC-CC-CCC------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 87777766554221 11 111 122489999999999999999998
No 305
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.3e-40 Score=319.54 Aligned_cols=254 Identities=23% Similarity=0.284 Sum_probs=196.5
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+++.... ....+|+|.++..... .....+..|+.+++.++||||+++++++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGK--REIPVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK 78 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCC--CceEEEEEECCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 4679999999999999999998864311 3457999998654221 23456777999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|.+++.... ..+.... +..++.||+.||+|||++|++|
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~----------------------------~~~i~~~i~~~l~~lH~~~i~h 129 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQ----------------------------LVGMLRGIASGMKYLSDMGYVH 129 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEee
Confidence 9999999999999999987642 1222221 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.++|+|||+++.+......
T Consensus 130 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 162 (267)
T cd05066 130 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA----------------------------------------------- 162 (267)
T ss_pred hhhchhcEEECCCCeEEeCCCCcccccccccce-----------------------------------------------
Confidence 999999999999999999999998543210000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|+|||||++||+++ |..||.+..
T Consensus 163 ----------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 163 ----------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred ----------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC
Confidence 000111234568999999998889999999999999999886 999998877
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..+....+.... ..+... . .+..+.+++.+||+.+|.+||++.
T Consensus 215 ~~~~~~~~~~~~-~~~~~~-~------~~~~~~~li~~~l~~~p~~Rp~~~ 257 (267)
T cd05066 215 NQDVIKAIEEGY-RLPAPM-D------CPAALHQLMLDCWQKDRNERPKFE 257 (267)
T ss_pred HHHHHHHHhCCC-cCCCCC-C------CCHHHHHHHHHHcccCchhCCCHH
Confidence 766666665442 222211 1 122489999999999999999997
No 306
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.4e-40 Score=318.19 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=192.6
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||+|+||.||+|.+.. ...+|+|.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~------~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~- 71 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNG------TTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS- 71 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcC------CceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-
Confidence 345779999999999999999998764 24589998865432 2245667999999999999999999885
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+..|+||||+++|+|.+++.......+.+... ..++.||+.||.|||++||
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~~l~~al~~lH~~~i 123 (260)
T cd05069 72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQL----------------------------VDMAAQIADGMAYIERMNY 123 (260)
T ss_pred CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCE
Confidence 456899999999999999987643222222222 3678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.++|+|||+++.......
T Consensus 124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 157 (260)
T cd05069 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEY---------------------------------------------- 157 (260)
T ss_pred eecccCcceEEEcCCCeEEECCCccceEccCCcc----------------------------------------------
Confidence 9999999999999999999999999843221000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 158 -------------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 206 (260)
T cd05069 158 -------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred -------------------------------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 00011235678999999988889999999999999999999 9999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
....+....+.... ..+.. .. .+..+.+||.+||..||++||++.
T Consensus 207 ~~~~~~~~~~~~~~-~~~~~-~~------~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05069 207 MVNREVLEQVERGY-RMPCP-QG------CPESLHELMKLCWKKDPDERPTFE 251 (260)
T ss_pred CCHHHHHHHHHcCC-CCCCC-cc------cCHHHHHHHHHHccCCcccCcCHH
Confidence 87777666665432 11111 11 123589999999999999999996
No 307
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6e-40 Score=321.39 Aligned_cols=259 Identities=18% Similarity=0.203 Sum_probs=193.8
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++++.||+|+||+||+|.+...... ....+++|.+.... .......+..|+.++..++||||+++++++.
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~- 79 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDS-IKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP- 79 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCc-eeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-
Confidence 4457899999999999999999998653211 12358888875432 1233456667888999999999999999875
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
+...+++|||+++|+|.+++.... ..+... .+..++.||+.||+|||++|+
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~----------------------------~~~~i~~qi~~~l~~lH~~~i 130 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQ----------------------------RLLNWCVQIAKGMYYLEEHRM 130 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcc-cCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCE
Confidence 456789999999999999987542 122222 123678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.......
T Consensus 131 iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 164 (279)
T cd05111 131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDK---------------------------------------------- 164 (279)
T ss_pred eccccCcceEEEcCCCcEEEcCCccceeccCCCc----------------------------------------------
Confidence 9999999999999999999999999843221000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........|+..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 165 ------------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 165 ------------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred ------------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 001122346778999999998889999999999999999998 9999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.........+..+... +... .. ..++.+++.+||..||++||++. |+++
T Consensus 215 ~~~~~~~~~~~~~~~~-~~~~-~~------~~~~~~li~~c~~~~p~~Rps~~----el~~ 263 (279)
T cd05111 215 MRPHEVPDLLEKGERL-AQPQ-IC------TIDVYMVMVKCWMIDENVRPTFK----ELAN 263 (279)
T ss_pred CCHHHHHHHHHCCCcC-CCCC-CC------CHHHHHHHHHHcCCCcccCcCHH----HHHH
Confidence 7765544444333222 1111 11 12478999999999999999997 5544
No 308
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.2e-40 Score=320.90 Aligned_cols=259 Identities=20% Similarity=0.222 Sum_probs=191.5
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec-----
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA----- 160 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----- 160 (517)
|.+.+.||+|+||.||+|++.... ....+|+|.++.... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~---~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 76 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDD---SILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESE 76 (272)
T ss_pred CccccccCcccCceEEEeEEccCC---CeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCccc
Confidence 457789999999999999987521 123689998865421 12345667779999999999999999997632
Q ss_pred -CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
....++||||+++|+|.+++.......-. .......+..++.||+.||+|||++|
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~i~~~l~~lH~~~ 132 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCP------------------------QYLPTQMLVKFMTDIASGMEYLSSKS 132 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCc------------------------ccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23578999999999999887532111000 00111223477899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||+++.......
T Consensus 133 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 167 (272)
T cd05075 133 FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY--------------------------------------------- 167 (272)
T ss_pred eeccccchhheEEcCCCCEEECCCCcccccCcccc---------------------------------------------
Confidence 99999999999999999999999999854321000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........+++.|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 168 -------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 216 (272)
T cd05075 168 -------------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYP 216 (272)
T ss_pred -------------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 000112246778999999998889999999999999999999 899998
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+....+....+..+...... .. ....+.++|.+||+.||++||++. ++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~~l~~~p~~Rps~~----~l~~ 266 (272)
T cd05075 217 GVENSEIYDYLRQGNRLKQP--PD------CLDGLYSLMSSCWLLNPKDRPSFE----TLRC 266 (272)
T ss_pred CCCHHHHHHHHHcCCCCCCC--CC------CCHHHHHHHHHHcCCCcccCcCHH----HHHH
Confidence 88777766666654321111 11 122489999999999999999997 6654
No 309
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1e-39 Score=322.58 Aligned_cols=267 Identities=22% Similarity=0.286 Sum_probs=196.0
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCC-----------CCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPM-----------VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF 150 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~-----------~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn 150 (517)
..++|++.+.||+|+||.||+|++.... .......+|+|++..... ......+.+|+.+|+.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~E~~~l~~l~~~~ 80 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN--KNARNDFLKEIKIMSRLKDPN 80 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCC
Confidence 3467999999999999999999765321 111345799999875421 233456777999999999999
Q ss_pred ccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHH
Q 010140 151 LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLL 230 (517)
Q Consensus 151 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 230 (517)
|+++++++..++..|+||||+++|+|.+++............ .........+..++.||+.
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~ 141 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKA-------------------DVVTISYSTLIFMATQIAS 141 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccc-------------------cccccCHHHHHHHHHHHHH
Confidence 999999999999999999999999999998764322111000 0011222334578999999
Q ss_pred HHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccc
Q 010140 231 ALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSV 310 (517)
Q Consensus 231 aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (517)
||+|||++||+||||||+|||++.++.++|+|||+++.+.....
T Consensus 142 al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------ 185 (296)
T cd05095 142 GMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY------------------------------------ 185 (296)
T ss_pred HHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc------------------------------------
Confidence 99999999999999999999999999999999999843211000
Q ss_pred ccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHH
Q 010140 311 SHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEM 390 (517)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~el 390 (517)
........+++.|+|||...+..++.++|||||||++|||
T Consensus 186 ----------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el 225 (296)
T cd05095 186 ----------------------------------------YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225 (296)
T ss_pred ----------------------------------------eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHH
Confidence 0001122456789999999888899999999999999999
Q ss_pred hh--CCCCCCCCChHHHHHHHhc------CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 391 LY--GTTPFKGENNEKTLINILK------KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 391 lt--G~~Pf~~~~~~~~~~~i~~------~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
++ |..||...+..+....... .....+.. .. +...+.+||.+||+.||.+||++.
T Consensus 226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~li~~cl~~~p~~Rp~~~ 288 (296)
T cd05095 226 LTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKP-AL------CPDSLYKLMLSCWRRNAKERPSFQ 288 (296)
T ss_pred HHhCCCCCccccChHHHHHHHHHHHhhccccccCCCC-CC------CCHHHHHHHHHHcCCCcccCCCHH
Confidence 98 7899987766555443321 11111111 11 123589999999999999999997
No 310
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.2e-39 Score=315.78 Aligned_cols=249 Identities=18% Similarity=0.304 Sum_probs=195.0
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
.+..++|++.+.||+|+||.||+|.... +..+|+|.+..... ....+.+|+.+++.++|+||+++++.+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~------~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 71 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNK------HTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT 71 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecC------CccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEEc
Confidence 3566899999999999999999998653 35699998875432 2345677999999999999999999988
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
. ...|+||||+++|+|.+++........+... +..++.||+.||.|||++|
T Consensus 72 ~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~aL~~lH~~~ 122 (260)
T cd05073 72 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPK----------------------------LIDFSAQIAEGMAFIEQRN 122 (260)
T ss_pred C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHH----------------------------HHHHHHHHHHHHHHHHhCC
Confidence 7 7889999999999999998765333333222 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
++||||||+||+++.++.+||+|||++..+.....
T Consensus 123 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 157 (260)
T cd05073 123 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------------------------------------- 157 (260)
T ss_pred ccccccCcceEEEcCCCcEEECCCcceeeccCCCc---------------------------------------------
Confidence 99999999999999999999999998743221000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 158 --------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 205 (260)
T cd05073 158 --------------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 205 (260)
T ss_pred --------------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCC
Confidence 00011235677999999998889999999999999999998 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.+.......+.... ..+... ....++.+++.+||+.||++||++.
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~i~~~l~~~p~~Rp~~~ 251 (260)
T cd05073 206 GMSNPEVIRALERGY-RMPRPE-------NCPEELYNIMMRCWKNRPEERPTFE 251 (260)
T ss_pred CCCHHHHHHHHhCCC-CCCCcc-------cCCHHHHHHHHHHcccCcccCcCHH
Confidence 887766666555432 111111 1223589999999999999999986
No 311
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1e-39 Score=315.31 Aligned_cols=244 Identities=22% Similarity=0.281 Sum_probs=195.9
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||.|+||.||+|... ++.||+|.+..... ...++..|+.+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 71 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR-------GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec-------CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcC
Confidence 45678999999999999999999865 36799999976643 34567779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
....|+||||+++++|.+++.......+.+... ..++.|++.||.|||++||
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~----------------------------~~~~~qi~~~l~~lh~~~i 123 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQ----------------------------LGFALDVCEGMEYLEEKNF 123 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999987653323333222 3678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.+||+|||+++.....
T Consensus 124 ~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~------------------------------------------------ 155 (256)
T cd05039 124 VHRDLAARNVLVSEDLVAKVSDFGLAKEASQG------------------------------------------------ 155 (256)
T ss_pred cchhcccceEEEeCCCCEEEcccccccccccc------------------------------------------------
Confidence 99999999999999999999999998432100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.....++..|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 156 ---------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 202 (256)
T cd05039 156 ---------------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202 (256)
T ss_pred ---------------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 001124567999999988889999999999999999997 9999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
....+....+...... .... ..+..+.+||.+||..+|++||++.
T Consensus 203 ~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~ 247 (256)
T cd05039 203 IPLKDVVPHVEKGYRM--EAPE------GCPPEVYKVMKDCWELDPAKRPTFK 247 (256)
T ss_pred CCHHHHHHHHhcCCCC--CCcc------CCCHHHHHHHHHHhccChhhCcCHH
Confidence 8776666555543211 1111 1123589999999999999999997
No 312
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-42 Score=311.18 Aligned_cols=270 Identities=26% Similarity=0.370 Sum_probs=204.2
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-- 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-- 160 (517)
.+.|+-..+||+|.||+||+|+.++ +++.||+|++--+... ...-....+|+.+|..|+|+|++.+++.+..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n-----~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKN-----TGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcC-----ccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence 4568888899999999999999987 6777998876543211 1222345569999999999999999987742
Q ss_pred ------CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 161 ------SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 161 ------~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
...+||||.+|+. ||.-++.... .++... +++.++.+++.||.|
T Consensus 90 Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~-vr~sls----------------------------~Ikk~Mk~Lm~GL~~ 139 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEH-DLAGLLSNRK-VRFSLS----------------------------EIKKVMKGLMNGLYY 139 (376)
T ss_pred CCcccccceeeeeHHHhhh-hHHHHhcCcc-ccccHH----------------------------HHHHHHHHHHHHHHH
Confidence 3458999999954 8887765431 233333 345889999999999
Q ss_pred HHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
+|...|+|||+||+|+||+.+|.+||+|||+++.+.......
T Consensus 140 iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~-------------------------------------- 181 (376)
T KOG0669|consen 140 IHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVV-------------------------------------- 181 (376)
T ss_pred HHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccC--------------------------------------
Confidence 999999999999999999999999999999996654322111
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG 393 (517)
..+.+..+-|.+|++||.+.|.. |+++.|||+.|||+.||++|
T Consensus 182 ------------------------------------kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtr 225 (376)
T KOG0669|consen 182 ------------------------------------KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTR 225 (376)
T ss_pred ------------------------------------CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHcc
Confidence 12244557799999999999875 99999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCCC-----CCCCCCCCC---------------------chhHHhhhhHHHHHHHhccCCccc
Q 010140 394 TTPFKGENNEKTLINILKKPL-----TFPRIGVSS---------------------SKEFEEVVKLQDLISKLLVKNPKK 447 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~---------------------~~~~~~~~~l~dLi~~~L~~dP~~ 447 (517)
.+.+.+.++...+..|..-.. .+|...... ...+....++.||+.+||..||.+
T Consensus 226 spimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~k 305 (376)
T KOG0669|consen 226 SPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTK 305 (376)
T ss_pred CccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCccc
Confidence 999999988877776643111 111111000 000011125789999999999999
Q ss_pred ccCCCCChHHhhcCCCcCC
Q 010140 448 RIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 448 R~t~~~~~~ell~hp~f~~ 466 (517)
|+.+. ++++|.||..
T Consensus 306 R~~ad----~alnh~~F~k 320 (376)
T KOG0669|consen 306 RIDAD----QALNHDFFWK 320 (376)
T ss_pred CcchH----hhhchhhhhc
Confidence 99998 9999999964
No 313
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.1e-40 Score=328.19 Aligned_cols=275 Identities=25% Similarity=0.302 Sum_probs=198.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-- 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-- 160 (517)
.++|++.++||+|+||.||+|+++. +++.+|||++...... ......+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIK-----TGRVVALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMAVERP 80 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECC-----CCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhheeccc
Confidence 5899999999999999999999876 6788999988644211 1112344569999999999999999998743
Q ss_pred ------CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHH
Q 010140 161 ------SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEY 234 (517)
Q Consensus 161 ------~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 234 (517)
...+|+||||+. ++|...+.... ..+++.. ++.++.||+.||+|
T Consensus 81 ~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~-~~~~~~~----------------------------~~~i~~~l~~al~~ 130 (311)
T cd07866 81 DKSKRKRGSVYMVTPYMD-HDLSGLLENPS-VKLTESQ----------------------------IKCYMLQLLEGINY 130 (311)
T ss_pred ccccccCceEEEEEecCC-cCHHHHHhccc-cCCCHHH----------------------------HHHHHHHHHHHHHH
Confidence 335799999995 57776665421 2232222 24678999999999
Q ss_pred HHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
||++||+||||||+|||++.++.++|+|||+++...........
T Consensus 131 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------ 174 (311)
T cd07866 131 LHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG------------------------------------ 174 (311)
T ss_pred HHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc------------------------------------
Confidence 99999999999999999999999999999998543211100000
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG 393 (517)
.............|++.|+|||.+.+. .++.++|||||||++|||++|
T Consensus 175 -------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g 223 (311)
T cd07866 175 -------------------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR 223 (311)
T ss_pred -------------------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhC
Confidence 000001122345789999999998764 478999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCCCCCCC-----------C--------CCCCc-hh-HHhhhhHHHHHHHhccCCcccccCCC
Q 010140 394 TTPFKGENNEKTLINILKKPLTFPR-----------I--------GVSSS-KE-FEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~~~~p~-----------~--------~~~~~-~~-~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
++||.+.+.......+.......+. . ..... .. ......+.+||.+||+.||.+|||+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ 303 (311)
T cd07866 224 RPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTAS 303 (311)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHH
Confidence 9999988776655554431110000 0 00000 00 01123588999999999999999997
Q ss_pred CChHHhhcCCCc
Q 010140 453 KGSVEIKRHEFF 464 (517)
Q Consensus 453 ~~~~ell~hp~f 464 (517)
|++.||||
T Consensus 304 ----ell~~~~f 311 (311)
T cd07866 304 ----DALEHPYF 311 (311)
T ss_pred ----HHhcCCCC
Confidence 99999998
No 314
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.7e-40 Score=333.18 Aligned_cols=267 Identities=25% Similarity=0.306 Sum_probs=205.4
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc--
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-- 162 (517)
+|++.+.||+|+||.||+|++.. +++.||||.+..... .....+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKR-----TGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCC-----CCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence 58999999999999999999876 578899999875421 1234456777999999999999999999998765
Q ss_pred ---eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 163 ---YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.+|+||||++ ++|.+++.... .+.+.. ++.++.||+.||+|||++|
T Consensus 75 ~~~~~~lv~e~~~-~~l~~~l~~~~--~l~~~~----------------------------~~~i~~~l~~~l~~LH~~g 123 (330)
T cd07834 75 DFNDVYIVTELME-TDLHKVIKSPQ--PLTDDH----------------------------IQYFLYQILRGLKYLHSAN 123 (330)
T ss_pred cccceEEEecchh-hhHHHHHhCCC--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCC
Confidence 7899999996 58888776532 232222 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.++|+|||++.........
T Consensus 124 i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~-------------------------------------------- 159 (330)
T cd07834 124 VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE-------------------------------------------- 159 (330)
T ss_pred eecCCCCHHHEEEcCCCCEEEcccCceEeecccccc--------------------------------------------
Confidence 999999999999999999999999998543211000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
........+++.|+|||++.+. .++.++|||||||++|+|++|.+||.
T Consensus 160 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~ 208 (330)
T cd07834 160 -------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP 208 (330)
T ss_pred -------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence 0011233588999999999888 78999999999999999999999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCC-----C------------chh-----HHhhhhHHHHHHHhccCCcccccCCCCChH
Q 010140 399 GENNEKTLINILKKPLTFPRIGVS-----S------------SKE-----FEEVVKLQDLISKLLVKNPKKRIGSLKGSV 456 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~-----~------------~~~-----~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ 456 (517)
+.+..+.+..+.......+..... . ... .....++.+||.+||++||.+||++.
T Consensus 209 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~---- 284 (330)
T cd07834 209 GRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITAD---- 284 (330)
T ss_pred CCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHH----
Confidence 888777666665422111110000 0 000 01234688999999999999999998
Q ss_pred HhhcCCCcCCC
Q 010140 457 EIKRHEFFKGI 467 (517)
Q Consensus 457 ell~hp~f~~~ 467 (517)
++++||||+++
T Consensus 285 ~ll~~~~~~~~ 295 (330)
T cd07834 285 EALAHPYLAQL 295 (330)
T ss_pred HHHhCccHHhh
Confidence 99999999864
No 315
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-39 Score=312.33 Aligned_cols=253 Identities=30% Similarity=0.491 Sum_probs=202.6
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|++|.||+|.+.. +++.+++|++..... .....+.+|+.+++.++||||+++++.+..+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 72 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKR-----TGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDEL 72 (253)
T ss_pred CceeeeeeccCCceEEEEEEECC-----CCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence 58899999999999999999876 568899999976543 2445677799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
++++||++|++|.+++.... ..++... +..++.|++.||.|||++|++|||
T Consensus 73 ~l~~e~~~~~~L~~~~~~~~-~~~~~~~----------------------------~~~i~~~i~~~l~~lh~~~i~h~d 123 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKSTN-QTLTESQ----------------------------IAYVCKELLKGLEYLHSNGIIHRD 123 (253)
T ss_pred EEEEecCCCCcHHHHHhhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHhhcCCEecCC
Confidence 99999999999999887642 1222222 236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|+|+||+++.++.++|+|||.+.......
T Consensus 124 l~p~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------------------- 152 (253)
T cd05122 124 IKAANILLTSDGEVKLIDFGLSAQLSDTK--------------------------------------------------- 152 (253)
T ss_pred CCHHHEEEccCCeEEEeeccccccccccc---------------------------------------------------
Confidence 99999999999999999999874322100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus 153 ----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 204 (253)
T cd05122 153 ----------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK 204 (253)
T ss_pred ----------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence 0123458889999999998888999999999999999999999998876555
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
....+..... +...... .....+.++|.+||+.||++||++. ++++|||
T Consensus 205 ~~~~~~~~~~--~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~t~~----~~l~~~~ 253 (253)
T cd05122 205 ALFKIATNGP--PGLRNPE----KWSDEFKDFLKKCLQKNPEKRPTAE----QLLKHPF 253 (253)
T ss_pred HHHHHHhcCC--CCcCccc----ccCHHHHHHHHHHccCChhhCCCHH----HHhcCCC
Confidence 5444443221 1111111 0122589999999999999999998 9999998
No 316
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.3e-40 Score=331.90 Aligned_cols=281 Identities=26% Similarity=0.306 Sum_probs=202.4
Q ss_pred CCce-EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHH-----------HHhHHHHHHHHHHhcCCCCc
Q 010140 84 DHFR-LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------KLHRADMEKVILTMLDHPFL 151 (517)
Q Consensus 84 ~~y~-i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-----------~~~~~~~E~~il~~l~HpnI 151 (517)
++|. +.+.||.|+||+||+|.+.. .++.||||++......... ....+.+|+.+++.++||||
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 82 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTL-----TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI 82 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECC-----CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence 4665 45779999999999999876 6788999998654322100 01245679999999999999
Q ss_pred cceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHH
Q 010140 152 PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLA 231 (517)
Q Consensus 152 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 231 (517)
+++++++..++..|+||||+. |+|.+++... ..++... ...++.||+.|
T Consensus 83 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~----------------------------~~~~~~ql~~a 131 (335)
T PTZ00024 83 MGLVDVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQ----------------------------VKCILLQILNG 131 (335)
T ss_pred eeeeEEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHH----------------------------HHHHHHHHHHH
Confidence 999999999999999999995 6898887653 2222222 23678999999
Q ss_pred HHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccc
Q 010140 232 LEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVS 311 (517)
Q Consensus 232 L~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (517)
|+|||++||+||||||+||+++.++.++|+|||+++.......... ..
T Consensus 132 L~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--------------------------------~~ 179 (335)
T PTZ00024 132 LNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDT--------------------------------LS 179 (335)
T ss_pred HHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccc--------------------------------cc
Confidence 9999999999999999999999999999999999854321100000 00
Q ss_pred cccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHH
Q 010140 312 HGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEM 390 (517)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~el 390 (517)
.. .............+++.|+|||.+.+.. ++.++|||||||++|+|
T Consensus 180 ~~--------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 180 KD--------------------------------ETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred cc--------------------------------ccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence 00 0000001112335788999999997754 68999999999999999
Q ss_pred hhCCCCCCCCChHHHHHHHhcCCCC-----CCCCC---------CCCchh-----HHhhhhHHHHHHHhccCCcccccCC
Q 010140 391 LYGTTPFKGENNEKTLINILKKPLT-----FPRIG---------VSSSKE-----FEEVVKLQDLISKLLVKNPKKRIGS 451 (517)
Q Consensus 391 ltG~~Pf~~~~~~~~~~~i~~~~~~-----~p~~~---------~~~~~~-----~~~~~~l~dLi~~~L~~dP~~R~t~ 451 (517)
++|.+||.+.+..+.+..+...... ++... ...... .....++.+||.+||+.||++||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 9999999988877766655431110 11000 000000 0113458899999999999999999
Q ss_pred CCChHHhhcCCCcCCCC
Q 010140 452 LKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 452 ~~~~~ell~hp~f~~~~ 468 (517)
+ |++.||||++..
T Consensus 308 ~----~~l~~~~~~~~~ 320 (335)
T PTZ00024 308 K----EALKHEYFKSDP 320 (335)
T ss_pred H----HHhcCcccCCCC
Confidence 8 999999998643
No 317
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.5e-40 Score=320.48 Aligned_cols=255 Identities=27% Similarity=0.380 Sum_probs=192.1
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEE
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCL 166 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 166 (517)
.+.+.||.|.||.||+|..+. .....+..|+||+++.... ......+..|+.++++++||||+++++++...+..++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSS--EEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSS--HHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccc--cccceeeeecccccccccccccccccccccccccccc
Confidence 578899999999999999983 1122568899999964321 2335667779999999999999999999998888999
Q ss_pred EEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCC
Q 010140 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLK 246 (517)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 246 (517)
|||||++|+|.+++.......++.... ..|+.||+.||.|||+++|+|+||+
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~----------------------------~~i~~~i~~~l~~Lh~~~iiH~~l~ 130 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQR----------------------------LSIAIQIAEALSYLHSNNIIHGNLS 130 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHH----------------------------HHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred ccccccccccccccccccccccccccc----------------------------ccccccccccccccccccccccccc
Confidence 999999999999998863333333222 3678999999999999999999999
Q ss_pred CCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccc
Q 010140 247 PENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTI 326 (517)
Q Consensus 247 p~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (517)
++|||++.++.+||+|||++........
T Consensus 131 ~~nill~~~~~~Kl~~f~~~~~~~~~~~---------------------------------------------------- 158 (259)
T PF07714_consen 131 PSNILLDSNGQVKLSDFGLSRPISEKSK---------------------------------------------------- 158 (259)
T ss_dssp GGGEEEETTTEEEEESTTTGEETTTSSS----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccc----------------------------------------------------
Confidence 9999999999999999999844311000
Q ss_pred ccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 010140 327 REQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKT 405 (517)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~ 405 (517)
........+...|+|||.+.+..++.++||||||+++|||++ |+.||...+..+.
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 001112236678999999998889999999999999999999 7899999888887
Q ss_pred HHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 406 LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 406 ~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
...+........ ..... ..+.++|.+||..||++||++. ++++
T Consensus 215 ~~~~~~~~~~~~--~~~~~------~~~~~li~~C~~~~p~~RPs~~----~i~~ 257 (259)
T PF07714_consen 215 IEKLKQGQRLPI--PDNCP------KDIYSLIQQCWSHDPEKRPSFQ----EILQ 257 (259)
T ss_dssp HHHHHTTEETTS--BTTSB------HHHHHHHHHHT-SSGGGS--HH----HHHH
T ss_pred ccccccccccee--ccchh------HHHHHHHHHHcCCChhhCcCHH----HHHh
Confidence 777755433211 11112 2489999999999999999997 6653
No 318
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.4e-40 Score=332.70 Aligned_cols=265 Identities=23% Similarity=0.309 Sum_probs=196.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-- 161 (517)
++|++.+.||.|+||.||+|.++. +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~-----~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSD-----CDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECC-----CCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 689999999999999999999886 678899999865432 2345566799999999999999999877543
Q ss_pred ------------ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHH
Q 010140 162 ------------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETL 229 (517)
Q Consensus 162 ------------~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~ 229 (517)
...|+||||++ ++|.+++... .++... ++.++.||+
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~----------------------------~~~~~~qi~ 124 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG---PLSEEH----------------------------ARLFMYQLL 124 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHcC---CCCHHH----------------------------HHHHHHHHH
Confidence 35799999996 6888776532 233322 236789999
Q ss_pred HHHHHHHhcCceeccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccc
Q 010140 230 LALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFS 308 (517)
Q Consensus 230 ~aL~yLH~~~iiHrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (517)
.||.|||++||+||||||+||+++. ++.+||+|||+++........
T Consensus 125 ~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------- 171 (342)
T cd07854 125 RGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH--------------------------------- 171 (342)
T ss_pred HHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc---------------------------------
Confidence 9999999999999999999999974 557899999998432210000
Q ss_pred ccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHH
Q 010140 309 SVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFL 387 (517)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil 387 (517)
........|+..|+|||++.+ ..++.++|||||||++
T Consensus 172 ------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil 209 (342)
T cd07854 172 ------------------------------------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 209 (342)
T ss_pred ------------------------------------------ccccccccccccccCHHHHhCccccCchhhHHHHHHHH
Confidence 000112257889999998765 4578999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHHhcCCCCCCC-----------------CC-C-CCchh--HHhhhhHHHHHHHhccCCcc
Q 010140 388 YEMLYGTTPFKGENNEKTLINILKKPLTFPR-----------------IG-V-SSSKE--FEEVVKLQDLISKLLVKNPK 446 (517)
Q Consensus 388 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~-----------------~~-~-~~~~~--~~~~~~l~dLi~~~L~~dP~ 446 (517)
|+|++|+.||.+.+..+....+......... .. . ..... .....++.+||.+||+.||.
T Consensus 210 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 289 (342)
T cd07854 210 AEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPM 289 (342)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCch
Confidence 9999999999887766555554432110000 00 0 00000 01224588999999999999
Q ss_pred cccCCCCChHHhhcCCCcCCC
Q 010140 447 KRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 447 ~R~t~~~~~~ell~hp~f~~~ 467 (517)
+||++. |+++||||+..
T Consensus 290 ~R~t~~----ell~h~~~~~~ 306 (342)
T cd07854 290 DRLTAE----EALMHPYMSCY 306 (342)
T ss_pred hccCHH----HHhCCCccccc
Confidence 999998 99999999854
No 319
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.5e-40 Score=316.25 Aligned_cols=244 Identities=21% Similarity=0.247 Sum_probs=187.4
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEe
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 170 (517)
+||+|+||.||+|.++.. .+++.+|+|+++..... ......+..|+.+++.++||||+++++++. .+..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMK---KSEKTVAVKILKNDNND-PALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecC---CCceEEEEEEccCCCCc-HHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEec
Confidence 689999999999976532 14578999998644221 234456777999999999999999999876 4567999999
Q ss_pred cCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCce
Q 010140 171 CPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENV 250 (517)
Q Consensus 171 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NI 250 (517)
+++|+|.+++.... .++... ...++.||+.||+|||++||+||||||.||
T Consensus 77 ~~~~~L~~~l~~~~--~~~~~~----------------------------~~~i~~qi~~al~~lH~~~i~H~dlkp~ni 126 (257)
T cd05116 77 AELGPLNKFLQKNK--HVTEKN----------------------------ITELVHQVSMGMKYLEETNFVHRDLAARNV 126 (257)
T ss_pred CCCCcHHHHHHhcC--CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEeecccchhhE
Confidence 99999999886532 222222 236789999999999999999999999999
Q ss_pred EEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 010140 251 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 330 (517)
Q Consensus 251 Ll~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (517)
|++.++.+||+|||+++........
T Consensus 127 ll~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------------------- 151 (257)
T cd05116 127 LLVTQHYAKISDFGLSKALGADENY------------------------------------------------------- 151 (257)
T ss_pred EEcCCCeEEECCCccccccCCCCCe-------------------------------------------------------
Confidence 9999999999999998443211000
Q ss_pred CCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 010140 331 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409 (517)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i 409 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i 211 (257)
T cd05116 152 --------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMI 211 (257)
T ss_pred --------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 000111235678999999988889999999999999999998 99999988777777766
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..+... + .... .+.++.+||.+||+.||++||++.
T Consensus 212 ~~~~~~-~-~~~~------~~~~l~~li~~~~~~~p~~Rp~~~ 246 (257)
T cd05116 212 ESGERM-E-CPQR------CPPEMYDLMKLCWTYGVDERPGFA 246 (257)
T ss_pred HCCCCC-C-CCCC------CCHHHHHHHHHHhccCchhCcCHH
Confidence 654321 1 1111 123589999999999999999996
No 320
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=369.81 Aligned_cols=259 Identities=29% Similarity=0.447 Sum_probs=207.7
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
++.-...||.|.||.||-|.+.+ ++...|+|-++-.... ......+.+|..+|..++|||+|++||+=.+.+.+
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~-----tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLD-----TGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred eeccccccCCcceeeeEEeecCC-----ccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 45667889999999999999887 6788899988755433 45566777899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
+|.||||+||+|.+.+++... . .+ ...+.|..|++.||+|||++||||||
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri--~--dE--------------------------~vt~vyt~qll~gla~LH~~gIVHRD 1359 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRI--E--DE--------------------------MVTRVYTKQLLEGLAYLHEHGIVHRD 1359 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcch--h--hh--------------------------hHHHHHHHHHHHHHHHHHhcCceecC
Confidence 999999999999998876421 1 11 11256789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.+|.+|++|||.|..+....
T Consensus 1360 IK~aNI~Ld~~g~iK~~DFGsa~ki~~~~--------------------------------------------------- 1388 (1509)
T KOG4645|consen 1360 IKPANILLDFNGLIKYGDFGSAVKIKNNA--------------------------------------------------- 1388 (1509)
T ss_pred CCccceeeecCCcEEeecccceeEecCch---------------------------------------------------
Confidence 99999999999999999999986544211
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC---CCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
+.........+||+.|||||++.+. +.+-+.|||||||++.||+||+.||...+
T Consensus 1389 -----------------------~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d 1445 (1509)
T KOG4645|consen 1389 -----------------------QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD 1445 (1509)
T ss_pred -----------------------hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc
Confidence 0011223456899999999999874 46789999999999999999999998765
Q ss_pred h-HHHHHHHhcCC-CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 402 N-EKTLINILKKP-LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 402 ~-~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
. ..++.++..+. +.+|.. .+.+.+|||..||+.||++|+++. |||.|-|-+.
T Consensus 1446 ne~aIMy~V~~gh~Pq~P~~---------ls~~g~dFle~Cl~~dP~~Rw~~~----qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1446 NEWAIMYHVAAGHKPQIPER---------LSSEGRDFLEHCLEQDPKMRWTAS----QLLEHAFGKS 1499 (1509)
T ss_pred chhHHHhHHhccCCCCCchh---------hhHhHHHHHHHHHhcCchhhhHHH----HHHHhhcccc
Confidence 4 55566655443 333332 122479999999999999999987 9999988653
No 321
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.3e-39 Score=313.64 Aligned_cols=254 Identities=28% Similarity=0.455 Sum_probs=205.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|++|.||++++.. .++.||+|.+...... ......+.+|+.++.+++||||+++++++.+.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLE-----TGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcC-----CCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEE
Confidence 58899999999999999999876 5678999999766432 23456778899999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++++|.+++... ..++... ...++.|++.||.|||++||+|||
T Consensus 75 ~~v~e~~~~~~L~~~~~~~--~~l~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~H~d 124 (254)
T cd06627 75 YIILEYAENGSLRQIIKKF--GPFPESL----------------------------VAVYVYQVLQGLAYLHEQGVIHRD 124 (254)
T ss_pred EEEEecCCCCcHHHHHHhc--cCCCHHH----------------------------HHHHHHHHHHHHHHHhhCCcccCC
Confidence 9999999999999988664 2222222 236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||++.......
T Consensus 125 l~p~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------------------- 153 (254)
T cd06627 125 IKAANILTTKDGVVKLADFGVATKLNDVS--------------------------------------------------- 153 (254)
T ss_pred CCHHHEEECCCCCEEEeccccceecCCCc---------------------------------------------------
Confidence 99999999999999999999984432100
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......|+..|+|||.+.+..++.++||||||+++|+|++|..||.......
T Consensus 154 ---------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~ 206 (254)
T cd06627 154 ---------------------------KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA 206 (254)
T ss_pred ---------------------------ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 00122357889999999988888999999999999999999999998877666
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+..... +...... ...+.++|.+||..+|++||++. +++.||||
T Consensus 207 ~~~~~~~~~~--~~~~~~~------~~~~~~~i~~~l~~~p~~R~~~~----~~l~~~~~ 254 (254)
T cd06627 207 ALFRIVQDDH--PPLPEGI------SPELKDFLMQCFQKDPNLRPTAK----QLLKHPWI 254 (254)
T ss_pred HHHHHhccCC--CCCCCCC------CHHHHHHHHHHHhCChhhCcCHH----HHhcCCCC
Confidence 5555543222 1111111 12489999999999999999998 99999997
No 322
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1e-39 Score=315.51 Aligned_cols=248 Identities=24% Similarity=0.307 Sum_probs=194.0
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|.+.... .....||||.+...... .....+..|+.++++++||||+++++.+.. ...++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~--~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSG--GKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCC--CCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEE
Confidence 46899999999999986531 13357999999876543 455677789999999999999999999988 88999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++|+|.+++.......+.+. .+..++.|++.||+|||++|++||||||+|
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~----------------------------~~~~~~~qi~~~L~~lH~~~i~H~di~p~n 127 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLIS----------------------------TLCDYAVQIANGMRYLESKRFIHRDLAARN 127 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHH----------------------------HHHHHHHHHHHHHHHHHhCCccccccCccc
Confidence 9999999999876532222222 123678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
|+++.++.+||+|||+++.+......
T Consensus 128 il~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------------ 153 (257)
T cd05040 128 ILLASDDKVKIGDFGLMRALPQNEDH------------------------------------------------------ 153 (257)
T ss_pred EEEecCCEEEeccccccccccccccc------------------------------------------------------
Confidence 99999999999999998543210000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 408 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~ 408 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....
T Consensus 154 ---------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 212 (257)
T cd05040 154 ---------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK 212 (257)
T ss_pred ---------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 000112347788999999998889999999999999999998 9999988877777666
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.......+... ..+..+.+++.+||+.+|++||++.
T Consensus 213 ~~~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ 249 (257)
T cd05040 213 IDKEGERLERPE-------ACPQDIYNVMLQCWAHNPADRPTFA 249 (257)
T ss_pred HHhcCCcCCCCc-------cCCHHHHHHHHHHCCCCcccCCCHH
Confidence 654322222111 1123589999999999999999997
No 323
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.4e-41 Score=357.48 Aligned_cols=275 Identities=28% Similarity=0.377 Sum_probs=200.4
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 161 (517)
..+|+.++.||+||||.||+|+++- +++.||||.|.-.. ......++.+|+.+|.+|+|||||++|..|...
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKl-----DGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKL-----DGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVEST 550 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecc-----cchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence 4679999999999999999999885 88999999998765 356677888899999999999999998766110
Q ss_pred --------------------------------------------------------------------------------
Q 010140 162 -------------------------------------------------------------------------------- 161 (517)
Q Consensus 162 -------------------------------------------------------------------------------- 161 (517)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred --------------------------------------ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhh
Q 010140 162 --------------------------------------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFF 203 (517)
Q Consensus 162 --------------------------------------~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~ 203 (517)
..+||-||||+..+|.+++.+..... ...
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d--------- 697 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRD--------- 697 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhH---------
Confidence 01578888888877777776653221 111
Q ss_pred hhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHH
Q 010140 204 FYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFE 283 (517)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~ 283 (517)
.+.++.+||+.||+|+|++|||||||||.||+++.++.|||+|||+|...........
T Consensus 698 ----------------~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d------ 755 (1351)
T KOG1035|consen 698 ----------------EAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESID------ 755 (1351)
T ss_pred ----------------HHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHh------
Confidence 1125679999999999999999999999999999999999999999843110000000
Q ss_pred HHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCc
Q 010140 284 AIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEY 363 (517)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 363 (517)
... ..............++.+||.-|
T Consensus 756 ---------------------------------------------~~~---------~~~~~~~g~~~~~~Ts~VGTalY 781 (1351)
T KOG1035|consen 756 ---------------------------------------------QDL---------SFSTNRAGSNDGDLTSQVGTALY 781 (1351)
T ss_pred ---------------------------------------------hcc---------CccccccCCCCcccccccceeee
Confidence 000 00000111112245677999999
Q ss_pred ccchhhcCCC---CCccchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHH
Q 010140 364 LAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENN-EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISK 439 (517)
Q Consensus 364 ~APE~l~~~~---~~~~~DiWSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~ 439 (517)
+|||++.+.. |+.|+||||||||+|||+. ||...-+ ...+..+.++..+.+. .... +..+.-..+|++
T Consensus 782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~-~f~~----~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPA-DFFD----PEHPEEASLIRW 853 (1351)
T ss_pred ecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCc-cccc----ccchHHHHHHHH
Confidence 9999998765 9999999999999999985 5765433 3344555555544441 1111 112235799999
Q ss_pred hccCCcccccCCCCChHHhhcCCCcC
Q 010140 440 LLVKNPKKRIGSLKGSVEIKRHEFFK 465 (517)
Q Consensus 440 ~L~~dP~~R~t~~~~~~ell~hp~f~ 465 (517)
||+.||.+||||. |+|++.||-
T Consensus 854 Ll~hdP~kRPtA~----eLL~s~llp 875 (1351)
T KOG1035|consen 854 LLSHDPSKRPTAT----ELLNSELLP 875 (1351)
T ss_pred HhcCCCccCCCHH----HHhhccCCC
Confidence 9999999999998 999999986
No 324
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.9e-40 Score=315.64 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=199.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|.+.... ..+..||+|++....... ....+..|+.+++.++|+||+++++++......++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEE
Confidence 46999999999999987521 136789999998664332 45677789999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCC-------CccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 170 YCPGGDLYAARQRQPG-------KRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
|+++++|.+++..... ..+++ ..+..++.||+.||+|||++||+|
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~al~~lH~~~i~H 128 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSL----------------------------KDLLSFAIQIAKGMEYLASKKFVH 128 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCH----------------------------HHHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999876421 22222 223478899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.+||+|||.+........
T Consensus 129 ~di~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 160 (262)
T cd00192 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDY------------------------------------------------ 160 (262)
T ss_pred CccCcceEEECCCCcEEEcccccccccccccc------------------------------------------------
Confidence 99999999999999999999999854331100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........+++.|+|||.+.+..++.++|||||||++|+|++ |..||....
T Consensus 161 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 212 (262)
T cd00192 161 ----------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS 212 (262)
T ss_pred ----------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC
Confidence 001123357889999999998889999999999999999999 699999988
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
..+....+...... +. ... .+.++.++|.+||..||.+||++. |+++|
T Consensus 213 ~~~~~~~~~~~~~~-~~-~~~------~~~~~~~li~~~l~~~p~~Rps~~----~l~~~ 260 (262)
T cd00192 213 NEEVLEYLRKGYRL-PK-PEY------CPDELYELMLSCWQLDPEDRPTFS----ELVER 260 (262)
T ss_pred HHHHHHHHHcCCCC-CC-Ccc------CChHHHHHHHHHccCCcccCcCHH----HHHHh
Confidence 77777777653211 11 111 123589999999999999999997 87765
No 325
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.1e-39 Score=317.57 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=184.3
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
++||+|+||.||+|..... .....+|+|.+..... ......+.+|+.+++.++||||+++++.+.....+|+|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRG---MSKARVVVKELRASAT--PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecC---CCCeEEEEeecCccCC--hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEE
Confidence 3699999999999976542 2456789998764321 2233456679999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++|+|.+++........... ....++.++.||+.||+|||++||+||||||+|
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~-------------------------~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N 130 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMA-------------------------QKDVLQRMACEVASGLLWLHQADFIHSDLALRN 130 (269)
T ss_pred eCCCCcHHHHHHhccccccccc-------------------------cHHHHHHHHHHHHHHHHHHHhcCEecccccHhh
Confidence 9999999999876532111100 011224678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||++........
T Consensus 131 ill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------------- 155 (269)
T cd05042 131 CQLTADLSVKIGDYGLALEQYPEDY------------------------------------------------------- 155 (269)
T ss_pred eEecCCCcEEEeccccccccccchh-------------------------------------------------------
Confidence 9999999999999998732210000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-------CCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-------QGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-------~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........+++.|+|||++.. ..++.++|||||||++|||++ |..||....
T Consensus 156 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 214 (269)
T cd05042 156 ---------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS 214 (269)
T ss_pred ---------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 000112246778999999753 346889999999999999998 889998877
Q ss_pred hHHHHHHHhcCC-CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 NEKTLINILKKP-LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.+.+..+.... ...+...... .....+.+++..|| .||++||++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~dp~~Rpt~~ 261 (269)
T cd05042 215 DEQVLKQVVREQDIKLPKPQLDL----KYSDRWYEVMQFCW-LDPETRPTAE 261 (269)
T ss_pred HHHHHHHHhhccCccCCCCcccc----cCCHHHHHHHHHHh-cCcccccCHH
Confidence 766666554432 2222211110 12234788999998 5999999996
No 326
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.9e-39 Score=312.97 Aligned_cols=257 Identities=30% Similarity=0.444 Sum_probs=203.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--c
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--H 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~ 162 (517)
+|.+.+.||+|++|.||+|.+.. +++.|++|++...... ......+.+|+.++++++||||+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKD-----TGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECC-----CCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC
Confidence 48899999999999999999886 5788999998765432 34456777899999999999999999999988 8
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..++||||+++++|.+++.... .+..... ..++.|++.||+|||++|++|
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~----------------------------~~~~~~l~~~l~~lh~~~~~h 124 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG--KLPEPVI----------------------------RKYTRQILEGLAYLHSNGIVH 124 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC--CCCHHHH----------------------------HHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999987643 2222222 367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||+|+||+++.++.++|+|||.+.........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 157 (260)
T cd06606 125 RDIKGANILVDSDGVVKLADFGCAKRLGDIETG----------------------------------------------- 157 (260)
T ss_pred cCCCHHHEEEcCCCCEEEcccccEEeccccccc-----------------------------------------------
Confidence 999999999999999999999987433211000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......++..|+|||.+.+...+.++||||||+++|+|++|..||.....
T Consensus 158 -----------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 208 (260)
T cd06606 158 -----------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN 208 (260)
T ss_pred -----------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 001233588899999999988899999999999999999999999987762
Q ss_pred -HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 403 -EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 403 -~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
......+... ...+...... ...+.+||.+||+.||.+||++. ++++||||
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~------~~~l~~~i~~~l~~~p~~Rp~~~----~ll~~~~~ 260 (260)
T cd06606 209 PMAALYKIGSS-GEPPEIPEHL------SEEAKDFLRKCLRRDPKKRPTAD----ELLQHPFL 260 (260)
T ss_pred hHHHHHhcccc-CCCcCCCccc------CHHHHHHHHHhCcCChhhCCCHH----HHhhCCCC
Confidence 3333333321 1111111111 23589999999999999999998 99999997
No 327
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.6e-40 Score=323.32 Aligned_cols=268 Identities=21% Similarity=0.247 Sum_probs=195.2
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCC---------CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCcc
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMV---------GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLP 152 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~---------~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv 152 (517)
..++|++.++||+|+||.||+|++.+... ......||+|.+..... ......+.+|++++++++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCcC
Confidence 34689999999999999999998764210 11234689999875421 23345677899999999999999
Q ss_pred ceeeeeecCceeEEEEEecCCCchhHHHHhCCCCc-cCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHH
Q 010140 153 TLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKR-FGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLA 231 (517)
Q Consensus 153 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 231 (517)
++++++......|+||||+++++|.+++....... +.... .........+..++.||+.|
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~i~~~i~~a 141 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHAN-------------------NIPSVSIANLLYMAVQIASG 141 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccc-------------------cCCcccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999886532100 00000 00001122334688999999
Q ss_pred HHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccc
Q 010140 232 LEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVS 311 (517)
Q Consensus 232 L~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (517)
|+|||++|++||||||+|||++.++.+||+|||++........
T Consensus 142 l~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------- 184 (295)
T cd05097 142 MKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY------------------------------------- 184 (295)
T ss_pred HHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-------------------------------------
Confidence 9999999999999999999999999999999999843211000
Q ss_pred cccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHh
Q 010140 312 HGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEML 391 (517)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ell 391 (517)
........++..|+|||++.+..++.++|||||||++|+|+
T Consensus 185 ---------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~ 225 (295)
T cd05097 185 ---------------------------------------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225 (295)
T ss_pred ---------------------------------------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHH
Confidence 00011234577899999999888999999999999999998
Q ss_pred h--CCCCCCCCChHHHHHHHhc-----CCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 392 Y--GTTPFKGENNEKTLINILK-----KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 392 t--G~~Pf~~~~~~~~~~~i~~-----~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+ |..||...+..+....+.. ....+...... .+..+.+||.+||+.||++||++.
T Consensus 226 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~~p~~RPs~~ 287 (295)
T cd05097 226 TLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPL------CPSPVFKLMMRCWSRDIKDRPTFN 287 (295)
T ss_pred HcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCC------CCHHHHHHHHHHcCCCchhCcCHH
Confidence 8 7789988776665544432 11111111111 123589999999999999999997
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.3e-40 Score=326.80 Aligned_cols=267 Identities=25% Similarity=0.332 Sum_probs=198.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...++|++.+.||+|+||.||+|.++. +++.||+|+++..... ......+..|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~ 77 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKD-----TGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTD 77 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECC-----CCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecC
Confidence 456789999999999999999999986 5678999998654211 1222345569999999999999999999876
Q ss_pred Cc----------eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHH
Q 010140 161 SH----------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLL 230 (517)
Q Consensus 161 ~~----------~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 230 (517)
.. .+|+||||+++ +|..++.... ..+... .++.++.||+.
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~----------------------------~~~~i~~qi~~ 127 (302)
T cd07864 78 KQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL-VHFSED----------------------------HIKSFMKQLLE 127 (302)
T ss_pred cchhhhccccCCcEEEEEcccCc-cHHHHHhcCC-CCCCHH----------------------------HHHHHHHHHHH
Confidence 54 79999999965 7777665431 122222 23478899999
Q ss_pred HHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccc
Q 010140 231 ALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSV 310 (517)
Q Consensus 231 aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (517)
||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus 128 aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------ 171 (302)
T cd07864 128 GLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES------------------------------------ 171 (302)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc------------------------------------
Confidence 99999999999999999999999999999999999843221000
Q ss_pred ccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHH
Q 010140 311 SHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYE 389 (517)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~e 389 (517)
.......++..|+|||.+.+. .++.++|||||||++|+
T Consensus 172 -----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~e 210 (302)
T cd07864 172 -----------------------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 210 (302)
T ss_pred -----------------------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHH
Confidence 001112467789999998754 47899999999999999
Q ss_pred HhhCCCCCCCCChHHHHHHHhcC---CC--CCCCCCCC--------------C-chhH-HhhhhHHHHHHHhccCCcccc
Q 010140 390 MLYGTTPFKGENNEKTLINILKK---PL--TFPRIGVS--------------S-SKEF-EEVVKLQDLISKLLVKNPKKR 448 (517)
Q Consensus 390 lltG~~Pf~~~~~~~~~~~i~~~---~~--~~p~~~~~--------------~-~~~~-~~~~~l~dLi~~~L~~dP~~R 448 (517)
|++|++||...+..+.+..+... .. .+|..... . ...+ ..+..+.+||.+||..||.+|
T Consensus 211 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 290 (302)
T cd07864 211 LFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKR 290 (302)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhC
Confidence 99999999887766555444331 11 01100000 0 0000 123468999999999999999
Q ss_pred cCCCCChHHhhcCCCc
Q 010140 449 IGSLKGSVEIKRHEFF 464 (517)
Q Consensus 449 ~t~~~~~~ell~hp~f 464 (517)
|++. +++.||||
T Consensus 291 p~~~----~il~~~~~ 302 (302)
T cd07864 291 CTAE----EALNSPWL 302 (302)
T ss_pred CCHH----HHhcCCCC
Confidence 9998 99999997
No 329
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7e-40 Score=326.95 Aligned_cols=255 Identities=27% Similarity=0.362 Sum_probs=201.6
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
..|...+.||+|+||.||+|++.. ++..||+|++.............+..|+.+++.++||||+++++++..+..
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVR-----TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcC-----CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe
Confidence 458899999999999999999876 568899999865432223445567789999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++ |+|.+++.... ..+... .+..++.||+.||.|||++||+||
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~~-~~l~~~----------------------------~~~~i~~~i~~~l~~lH~~~i~H~ 149 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVHK-KPLQEV----------------------------EIAAITHGALQGLAYLHSHNMIHR 149 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHhc-CCCCHH----------------------------HHHHHHHHHHHHHHHHHHCCcccC
Confidence 999999996 57777665432 122222 223678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+|+||+++.++.+||+|||++....
T Consensus 150 dL~p~Nil~~~~~~~kl~dfg~~~~~~----------------------------------------------------- 176 (317)
T cd06635 150 DIKAGNILLTEPGQVKLADFGSASIAS----------------------------------------------------- 176 (317)
T ss_pred CCCcccEEECCCCCEEEecCCCccccC-----------------------------------------------------
Confidence 999999999999999999999873211
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc---CCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~---~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
......|++.|+|||++. ...++.++|||||||++|+|++|..||...
T Consensus 177 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 227 (317)
T cd06635 177 -----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 227 (317)
T ss_pred -----------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 011235888999999984 345789999999999999999999999887
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
........+........... .....+++||.+||+.+|.+||++. ++++|+|+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~~p~~Rpt~~----~il~~~~~~~ 282 (317)
T cd06635 228 NAMSALYHIAQNESPTLQSN-------EWSDYFRNFVDSCLQKIPQDRPTSE----ELLKHMFVLR 282 (317)
T ss_pred cHHHHHHHHHhccCCCCCCc-------cccHHHHHHHHHHccCCcccCcCHH----HHHhChhhhc
Confidence 77666666655433221111 1122489999999999999999998 9999999864
No 330
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.3e-40 Score=332.00 Aligned_cols=262 Identities=29% Similarity=0.402 Sum_probs=197.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-- 161 (517)
++|.+.+.||+|+||.||+|++.. +++.||||++.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKR-----TGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS 88 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCC-----CCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence 689999999999999999999876 6788999998753211 12234566799999999999999999998654
Q ss_pred ----ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 162 ----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 162 ----~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
...|+||||+. .+|..++. ..++.... +.++.||+.||+|||+
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~----------------------------~~~~~qi~~aL~~LH~ 135 (342)
T cd07879 89 GDEFQDFYLVMPYMQ-TDLQKIMG----HPLSEDKV----------------------------QYLVYQMLCGLKYIHS 135 (342)
T ss_pred CCCCceEEEEecccc-cCHHHHHc----CCCCHHHH----------------------------HHHHHHHHHHHHHHHH
Confidence 34699999995 47765542 12332222 3678999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+||+||||||+|||++.++.+||+|||+++....
T Consensus 136 ~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~---------------------------------------------- 169 (342)
T cd07879 136 AGIIHRDLKPGNLAVNEDCELKILDFGLARHADA---------------------------------------------- 169 (342)
T ss_pred CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC----------------------------------------------
Confidence 9999999999999999999999999999732110
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~P 396 (517)
......|++.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 170 -----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~p 214 (342)
T cd07879 170 -----------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTL 214 (342)
T ss_pred -----------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCC
Confidence 0112357889999999876 4588999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCC-C-------------------CCCCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCC
Q 010140 397 FKGENNEKTLINILKKPL-T-------------------FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKG 454 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~-~-------------------~p~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~ 454 (517)
|.+.+....+..+..... . .+......... .....++.+||.+||+.||++||++.
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~-- 292 (342)
T cd07879 215 FKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT-- 292 (342)
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHH--
Confidence 998776555544433110 0 00000000000 01223588999999999999999998
Q ss_pred hHHhhcCCCcCCCCc
Q 010140 455 SVEIKRHEFFKGINW 469 (517)
Q Consensus 455 ~~ell~hp~f~~~~~ 469 (517)
+++.||||+++.+
T Consensus 293 --e~l~h~~f~~~~~ 305 (342)
T cd07879 293 --EALEHPYFDSFRD 305 (342)
T ss_pred --HHhcCcchhhccc
Confidence 9999999998765
No 331
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-39 Score=316.71 Aligned_cols=256 Identities=20% Similarity=0.244 Sum_probs=197.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|+..+.||+|+||.||+|+...... ....+|+|.+..... ......+..|+.+++.++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGR--KEVAVAIKTLKPGYT--EKQRQDFLSEASIMGQFSHHNIIRLEGVVTK 77 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCC--CceEEEEEeccccCC--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence 345689999999999999999999875311 235799999865421 1234556779999999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+..|+||||+++++|.+++.... ..+.... ...++.|++.||+|||++||
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~----------------------------~~~~~~~l~~al~~lH~~~i 128 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-GEFSSYQ----------------------------LVGMLRGIAAGMKYLSDMNY 128 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCe
Confidence 999999999999999999886532 2222222 23678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+||+++.++.+||+|||++.........
T Consensus 129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 163 (268)
T cd05063 129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG--------------------------------------------- 163 (268)
T ss_pred eccccchhhEEEcCCCcEEECCCccceeccccccc---------------------------------------------
Confidence 99999999999999999999999997433210000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.........+..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 164 ------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 164 ------------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred ------------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 000011123567999999998889999999999999999997 9999988
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+..+....+.... ..|... . ....+.+|+.+||..+|++||++.
T Consensus 214 ~~~~~~~~~i~~~~-~~~~~~-~------~~~~~~~li~~c~~~~p~~Rp~~~ 258 (268)
T cd05063 214 MSNHEVMKAINDGF-RLPAPM-D------CPSAVYQLMLQCWQQDRARRPRFV 258 (268)
T ss_pred CCHHHHHHHHhcCC-CCCCCC-C------CCHHHHHHHHHHcCCCcccCcCHH
Confidence 87777766665432 222211 1 123489999999999999999997
No 332
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.9e-40 Score=332.40 Aligned_cols=262 Identities=28% Similarity=0.383 Sum_probs=202.2
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|++.. +++.||||++...... ......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTK-----TGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 4689999999999999999999986 6788999998654222 223455667999999999999999999887655
Q ss_pred e------eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 163 Y------SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 163 ~------~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
. +|+|+||+ +++|.+++.. ..+++..+ +.++.||+.||+|||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~----------------------------~~~~~ql~~aL~~LH 135 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHI----------------------------QFLVYQILRGLKYIH 135 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhc---CCCCHHHH----------------------------HHHHHHHHHHHHHHH
Confidence 4 89999999 7799888764 22333322 367899999999999
Q ss_pred hcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 237 ~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
++||+||||||+||+++.++.++|+|||++.....
T Consensus 136 ~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~--------------------------------------------- 170 (343)
T cd07851 136 SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD--------------------------------------------- 170 (343)
T ss_pred HCCeecCCCCHHHeEECCCCCEEEccccccccccc---------------------------------------------
Confidence 99999999999999999999999999999833210
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~ 395 (517)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.
T Consensus 171 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~ 214 (343)
T cd07851 171 ------------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKT 214 (343)
T ss_pred ------------------------------------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 01233578899999998764 57899999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCC--------------------CCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPR--------------------IGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~--------------------~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
||.+.+....+..+.......+. ........ .....++.+||.+||+.||++|||+.
T Consensus 215 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~- 293 (343)
T cd07851 215 LFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA- 293 (343)
T ss_pred CCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHH-
Confidence 99988776666555442111110 00000000 01234689999999999999999998
Q ss_pred ChHHhhcCCCcCCC
Q 010140 454 GSVEIKRHEFFKGI 467 (517)
Q Consensus 454 ~~~ell~hp~f~~~ 467 (517)
||++||||+..
T Consensus 294 ---ell~h~~~~~~ 304 (343)
T cd07851 294 ---EALAHPYLAEY 304 (343)
T ss_pred ---HHhcCCCcccc
Confidence 99999999853
No 333
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-39 Score=314.79 Aligned_cols=256 Identities=30% Similarity=0.417 Sum_probs=205.1
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+|++.+.||+|+||.||+++++. +++.+|+|.+....... .....+..|+.+++.++||||+++++++......
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLS-----DNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECC-----CCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEE
Confidence 58999999999999999998876 67889999987654332 3345566799999999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++++|.+++............. .+..++.||+.||+|||++|++|||
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~al~~lh~~~i~h~~ 128 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQ--------------------------EIWRIFIQLLRGLQALHEQKILHRD 128 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhhcCCCCHH--------------------------HHHHHHHHHHHHHHHHhhCCcccCC
Confidence 99999999999999886632211111111 1236789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|+|+||+++.++.+||+|||+++.....
T Consensus 129 l~~~ni~~~~~~~~kl~d~g~~~~~~~~---------------------------------------------------- 156 (256)
T cd08530 129 LKSANILLVANDLVKIGDLGISKVLKKN---------------------------------------------------- 156 (256)
T ss_pred CCcceEEEecCCcEEEeeccchhhhccC----------------------------------------------------
Confidence 9999999999999999999997432210
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+
T Consensus 157 ----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 208 (256)
T cd08530 157 ----------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208 (256)
T ss_pred ----------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0112247889999999998889999999999999999999999999888776
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
....+...... .... ....+++++|.+||..+|++||++. ++++||++
T Consensus 209 ~~~~~~~~~~~--~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~----~~l~~p~~ 256 (256)
T cd08530 209 LRYKVQRGKYP--PIPP------IYSQDLQNFIRSMLQVKPKLRPNCD----KILASPAV 256 (256)
T ss_pred HHHHHhcCCCC--CCch------hhCHHHHHHHHHHcCCCcccCCCHH----HHhcCCCC
Confidence 66665544322 1111 1223589999999999999999998 99999984
No 334
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.2e-39 Score=322.09 Aligned_cols=262 Identities=24% Similarity=0.324 Sum_probs=197.6
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 157 (517)
..+..++|++.+.||+|+||.||+|++.. +++.||||.+.+.... .....+..|+.++.++ .||||++++++
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~ 82 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKK-----TGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGY 82 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECC-----CCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhhee
Confidence 35667899999999999999999999886 5788999998754221 2233444566666666 59999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+......|+||||+ +++|..++.... ..++... +..++.||+.||+|||+
T Consensus 83 ~~~~~~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~----------------------------~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 83 FITDSDVFICMELM-STCLDKLLKRIQ-GPIPEDI----------------------------LGKMTVAIVKALHYLKE 132 (296)
T ss_pred eecCCeEEEEeecc-CcCHHHHHHHhc-CCCCHHH----------------------------HHHHHHHHHHHHHHHHh
Confidence 99999999999999 557777665532 1222221 23678999999999997
Q ss_pred -cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 238 -MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 238 -~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
.||+||||+|+||+++.++.+||+|||++..+....
T Consensus 133 ~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------- 169 (296)
T cd06618 133 KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK------------------------------------------- 169 (296)
T ss_pred hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC-------------------------------------------
Confidence 599999999999999999999999999874321100
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC----CCccchHHHHHHHHHHHhh
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLY 392 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~----~~~~~DiWSlGvil~ellt 392 (517)
......|+..|+|||.+.+.. ++.++|||||||++|+|++
T Consensus 170 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~ 213 (296)
T cd06618 170 ------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELAT 213 (296)
T ss_pred ------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHh
Confidence 001124788899999997654 7889999999999999999
Q ss_pred CCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 393 GTTPFKGENN-EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 393 G~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
|+.||..... .+.+..+............ ....++.+||.+||..||.+||++. ++++||||..
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rp~~~----~il~~~~~~~ 278 (296)
T cd06618 214 GQFPYKNCKTEFEVLTKILQEEPPSLPPNE------GFSPDFCSFVDLCLTKDHRKRPKYR----ELLQHPFIRR 278 (296)
T ss_pred CCCCCCcchhHHHHHHHHhcCCCCCCCCCC------CCCHHHHHHHHHHccCChhhCCCHH----HHhcChhhhc
Confidence 9999976433 3445555544322111111 1123589999999999999999998 9999999974
No 335
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.5e-40 Score=318.59 Aligned_cols=258 Identities=28% Similarity=0.458 Sum_probs=196.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH--HHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--IRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+|.+.+.||+|+||.||++++.. .+..+++|+++..... ......++..|+.+++.++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKK-----AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecC-----CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC
Confidence 58999999999999999999876 2334555554432110 0122334556899999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|..++...........+. ..+.++.|++.||.|||++|++|
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~~l~~lH~~~i~h 129 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSEN--------------------------QVCEWFIQLLLGVHYMHQRRILH 129 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHH--------------------------HHHHHHHHHHHHHHHHHHcCccc
Confidence 9999999999999998886532111111111 22367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+||||+||+++. +.++|+|||+++......
T Consensus 130 ~~l~~~nili~~-~~~~l~d~g~~~~~~~~~------------------------------------------------- 159 (260)
T cd08222 130 RDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC------------------------------------------------- 159 (260)
T ss_pred cCCChhheEeec-CCEeecccCceeecCCCc-------------------------------------------------
Confidence 999999999975 679999999874321100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.....
T Consensus 160 -----------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~ 210 (260)
T cd08222 160 -----------------------------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF 210 (260)
T ss_pred -----------------------------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 011223578899999999888889999999999999999999999988777
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
......+....... ... ....++.++|.+||..||++||++. |+++||||
T Consensus 211 ~~~~~~~~~~~~~~--~~~------~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~ 260 (260)
T cd08222 211 LSVVLRIVEGPTPS--LPE------TYSRQLNSIMQSMLNKDPSLRPSAA----EILRNPFI 260 (260)
T ss_pred HHHHHHHHcCCCCC--Ccc------hhcHHHHHHHHHHhcCChhhCcCHH----HHhhCCCC
Confidence 66666665543221 111 1123589999999999999999998 99999997
No 336
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.5e-39 Score=316.65 Aligned_cols=260 Identities=22% Similarity=0.264 Sum_probs=198.5
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.++|++.+.||+|+||.||+|+++.... ....||||++..... ......+..|+.+++.++||||+++++++.++.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 78 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGK--REIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR 78 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCC--CceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC
Confidence 4679999999999999999999876322 235799999875421 233456778999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..++||||+++|+|.+++.... ..+.... ++.++.|++.||.|||++|++|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~----------------------------~~~i~~~l~~al~~lH~~g~~H 129 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-GQFTVIQ----------------------------LVGMLRGIAAGMKYLSEMNYVH 129 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCEee
Confidence 9999999999999999886542 2222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.+||+|||++..........
T Consensus 130 ~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~---------------------------------------------- 163 (269)
T cd05065 130 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP---------------------------------------------- 163 (269)
T ss_pred cccChheEEEcCCCcEEECCCccccccccCcccc----------------------------------------------
Confidence 9999999999999999999999874332100000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
.........++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 164 ---------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~ 216 (269)
T cd05065 164 ---------------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 216 (269)
T ss_pred ---------------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence 0000001113457999999998889999999999999999886 999998887
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
..+....+... ...+... ..+..+.+++.+||..+|.+||++. +++.
T Consensus 217 ~~~~~~~i~~~-~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rp~~~----~i~~ 263 (269)
T cd05065 217 NQDVINAIEQD-YRLPPPM-------DCPTALHQLMLDCWQKDRNARPKFG----QIVS 263 (269)
T ss_pred HHHHHHHHHcC-CcCCCcc-------cCCHHHHHHHHHHcCCChhhCcCHH----HHHH
Confidence 77766666443 2222111 1123589999999999999999997 6654
No 337
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=7.8e-40 Score=321.25 Aligned_cols=262 Identities=29% Similarity=0.419 Sum_probs=199.1
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--ce
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--HY 163 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~ 163 (517)
|++.+.||+|+||.||+|++.. +++.+|+|++.... ........+.+|+.+++.++||||+++++++... +.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~-----~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKK-----TGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECC-----CCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence 6889999999999999999886 57889999997653 1122334566799999999999999999999887 89
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||++ ++|..++.... ..+.+.. ++.++.||+.||+|||++|++|+
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~-~~~~~~~----------------------------~~~i~~~i~~al~~LH~~~~~h~ 124 (287)
T cd07840 75 IYMVFEYMD-HDLTGLLDSPE-VKFTESQ----------------------------IKCYMKQLLEGLQYLHSNGILHR 124 (287)
T ss_pred EEEEecccc-ccHHHHHhccC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCceec
Confidence 999999996 58888776532 1222222 23678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+||+++.++.+||+|||++........
T Consensus 125 dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 155 (287)
T cd07840 125 DIKGSNILINNDGVLKLADFGLARPYTKRNS------------------------------------------------- 155 (287)
T ss_pred cCcHHHeEEcCCCCEEEccccceeeccCCCc-------------------------------------------------
Confidence 9999999999999999999999843321000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||...+.
T Consensus 156 ----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~ 207 (287)
T cd07840 156 ----------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE 207 (287)
T ss_pred ----------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 001122467889999988764 478999999999999999999999998877
Q ss_pred HHHHHHHhcCCCC-----CCCCCC-----------CCc----hhHH--hhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 403 EKTLINILKKPLT-----FPRIGV-----------SSS----KEFE--EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 403 ~~~~~~i~~~~~~-----~p~~~~-----------~~~----~~~~--~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
...+..+...... ++.... ... ..+. .+..+.++|.+||..||.+||++. +++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~----~~l~ 283 (287)
T cd07840 208 LEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD----QALQ 283 (287)
T ss_pred HHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHH----HHhh
Confidence 6665555432110 000000 000 0001 144688999999999999999998 9999
Q ss_pred CCCc
Q 010140 461 HEFF 464 (517)
Q Consensus 461 hp~f 464 (517)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07840 284 HEYF 287 (287)
T ss_pred CcCC
Confidence 9997
No 338
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.9e-39 Score=313.75 Aligned_cols=245 Identities=22% Similarity=0.281 Sum_probs=188.7
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
++||+|+||.||+|+...... ....||+|.+...... .....+..|+.+++.++||||+++++++. ....++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~--~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSG--KEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCC--CcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEE
Confidence 479999999999998766321 3378999999866443 34456777999999999999999999876 456899999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++|+|.+++.... .+.... +..++.|++.||+|||++|++||||||+|
T Consensus 76 ~~~~~~L~~~l~~~~--~~~~~~----------------------------~~~~~~qi~~~l~~lh~~~i~H~di~p~n 125 (257)
T cd05060 76 LAPLGPLLKYLKKRR--EIPVSD----------------------------LKELAHQVAMGMAYLESKHFVHRDLAARN 125 (257)
T ss_pred eCCCCcHHHHHHhCC--CCCHHH----------------------------HHHHHHHHHHHHHHHhhcCeeccCcccce
Confidence 999999999987643 222222 23678999999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.+......
T Consensus 126 ili~~~~~~kl~df~~~~~~~~~~~~------------------------------------------------------ 151 (257)
T cd05060 126 VLLVNRHQAKISDFGMSRALGAGSDY------------------------------------------------------ 151 (257)
T ss_pred EEEcCCCcEEeccccccceeecCCcc------------------------------------------------------
Confidence 99999999999999998543210000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 408 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~ 408 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....
T Consensus 152 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~ 210 (257)
T cd05060 152 ---------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAM 210 (257)
T ss_pred ---------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 000011124568999999998889999999999999999998 9999988877666666
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+...... +... .....+++||.+||..||++||++.
T Consensus 211 ~~~~~~~-~~~~-------~~~~~l~~li~~cl~~~p~~Rp~~~ 246 (257)
T cd05060 211 LESGERL-PRPE-------ECPQEIYSIMLSCWKYRPEDRPTFS 246 (257)
T ss_pred HHcCCcC-CCCC-------CCCHHHHHHHHHHhcCChhhCcCHH
Confidence 5544321 1111 1123589999999999999999997
No 339
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.2e-39 Score=313.52 Aligned_cols=244 Identities=23% Similarity=0.250 Sum_probs=186.5
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEe
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 170 (517)
.||+|+||.||+|.++... .+..||+|++..... ......+.+|+.++++++||||+++++++.. ...|+||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~---~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRK---KQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCC---CceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEe
Confidence 4899999999999876421 345699999875422 2334567789999999999999999998864 578999999
Q ss_pred cCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCce
Q 010140 171 CPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENV 250 (517)
Q Consensus 171 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NI 250 (517)
+++|+|.+++.... ..+++.. +..++.||+.||+|||++|++||||||+||
T Consensus 76 ~~~~~L~~~l~~~~-~~~~~~~----------------------------~~~~~~~i~~~l~~lH~~~i~H~dlkp~ni 126 (257)
T cd05115 76 ASGGPLNKFLSGKK-DEITVSN----------------------------VVELMHQVSMGMKYLEGKNFVHRDLAARNV 126 (257)
T ss_pred CCCCCHHHHHHhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHhcCeeecccchheE
Confidence 99999999886432 2222222 236789999999999999999999999999
Q ss_pred EEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 010140 251 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 330 (517)
Q Consensus 251 Ll~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (517)
|++.++.+||+|||+++........
T Consensus 127 l~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------------- 151 (257)
T cd05115 127 LLVNQHYAKISDFGLSKALGADDSY------------------------------------------------------- 151 (257)
T ss_pred EEcCCCcEEeccCCccccccCCccc-------------------------------------------------------
Confidence 9999999999999998432210000
Q ss_pred CCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 010140 331 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409 (517)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i 409 (517)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05115 152 --------------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI 211 (257)
T ss_pred --------------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 000011124678999999998889999999999999999996 99999988877776666
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..+.... .... ...++.+||.+||..||++||++.
T Consensus 212 ~~~~~~~--~~~~------~~~~l~~li~~c~~~~~~~Rp~~~ 246 (257)
T cd05115 212 EQGKRLD--CPAE------CPPEMYALMKDCWIYKWEDRPNFA 246 (257)
T ss_pred HCCCCCC--CCCC------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 5543211 1111 123589999999999999999996
No 340
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=6.7e-40 Score=321.16 Aligned_cols=261 Identities=28% Similarity=0.410 Sum_probs=200.1
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
|++.+.||+|++|.||+|.+.. +++.+++|.+...... ......+..|+.+|+.++||||+++++++..+...|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKL-----TGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCC-----CCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEE
Confidence 6788999999999999999875 6788999998755322 123456667999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+||||++ ++|.+++.... ..+.... +..++.||+.||.|||++||+|+||
T Consensus 75 ~v~e~~~-~~l~~~l~~~~-~~~~~~~----------------------------~~~~~~~i~~~l~~LH~~~i~H~dl 124 (283)
T cd05118 75 LVFEFMD-TDLYKLIKDRQ-RGLPESL----------------------------IKSYLYQLLQGLAFCHSHGILHRDL 124 (283)
T ss_pred EEEeccC-CCHHHHHHhhc-ccCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeeecCc
Confidence 9999996 48888776532 2222222 2367899999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
||+||+++.++.++|+|||.+.......
T Consensus 125 ~p~nili~~~~~~~l~df~~~~~~~~~~---------------------------------------------------- 152 (283)
T cd05118 125 KPENLLINTEGVLKLADFGLARSFGSPV---------------------------------------------------- 152 (283)
T ss_pred CHHHEEECCCCcEEEeeeeeeEecCCCc----------------------------------------------------
Confidence 9999999999999999999874322100
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......++..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus 153 --------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~ 206 (283)
T cd05118 153 --------------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID 206 (283)
T ss_pred --------------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123578899999999877 68999999999999999999999998887766
Q ss_pred HHHHHhcCCC-------------------CCCCCCCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 405 TLINILKKPL-------------------TFPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 405 ~~~~i~~~~~-------------------~~p~~~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
.+..+..... .++........ ......++.+||.+||+.||.+||++. ++++|||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~----~ll~~~~ 282 (283)
T cd05118 207 QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAE----QALAHPY 282 (283)
T ss_pred HHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHH----HHhhCCC
Confidence 5555432110 00100000000 012234689999999999999999998 9999999
Q ss_pred c
Q 010140 464 F 464 (517)
Q Consensus 464 f 464 (517)
|
T Consensus 283 ~ 283 (283)
T cd05118 283 F 283 (283)
T ss_pred C
Confidence 7
No 341
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1e-39 Score=324.38 Aligned_cols=256 Identities=26% Similarity=0.347 Sum_probs=200.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCce
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 163 (517)
..|...+.||+|+||.||+|+++. .+..+|+|.+............++..|+.+++.++|+||+++++++.....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVR-----NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcC-----CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe
Confidence 458888999999999999999876 567899999864322223344566779999999999999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.|+||||+. |+|.+++.... ..+... .+..++.|++.||.|||+++++||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~-~~l~~~----------------------------~~~~~~~~l~~~l~~LH~~~i~H~ 139 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHK-KPLQEV----------------------------EIAAVTHGALQGLAYLHSHNMIHR 139 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHhCCcccC
Confidence 999999995 68877665432 222222 223678999999999999999999
Q ss_pred cCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 244 DLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 244 DLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||||+|||++.++.++|+|||++.....
T Consensus 140 dl~p~nil~~~~~~~kl~dfg~~~~~~~---------------------------------------------------- 167 (308)
T cd06634 140 DVKAGNILLSEPGLVKLGDFGSASIMAP---------------------------------------------------- 167 (308)
T ss_pred CCCHHhEEECCCCcEEECCcccceeecC----------------------------------------------------
Confidence 9999999999999999999998732110
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC---CCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~---~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
.....|++.|+|||.+.+ ..++.++|||||||++|+|++|..||...
T Consensus 168 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 168 ------------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred ------------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 112358889999999853 45788999999999999999999999877
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
+.......+........... .....+.+||.+||..+|++||++. ++++|||+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~cl~~~P~~Rp~~~----~ll~~~~~~~~ 273 (308)
T cd06634 218 NAMSALYHIAQNESPALQSG-------HWSEYFRNFVDSCLQKIPQDRPTSE----VLLKHRFVLRE 273 (308)
T ss_pred cHHHHHHHHhhcCCCCcCcc-------cccHHHHHHHHHHhhCCcccCCCHH----HHhhCcccccc
Confidence 66655555554332211111 1122489999999999999999998 99999999863
No 342
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.6e-39 Score=313.79 Aligned_cols=241 Identities=23% Similarity=0.277 Sum_probs=189.8
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|++.+.||+|+||.||++.. .++.||+|.+.... ....+.+|+.+++.++||||+++++++..+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY-------TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN 71 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc-------CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 456899999999999999999864 34679999986542 124566799999999999999999998765
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
..|+||||+++++|.+++.......+++... ..++.|++.||.|||++|++
T Consensus 72 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~----------------------------~~~~~qi~~al~~lH~~~~~ 122 (254)
T cd05083 72 -GLYIVMELMSKGNLVNFLRTRGRALVSVIQL----------------------------LQFSLDVAEGMEYLESKKLV 122 (254)
T ss_pred -CcEEEEECCCCCCHHHHHHhcCcCCCCHHHH----------------------------HHHHHHHHHHHHHHHhCCee
Confidence 4799999999999999987654333332222 36789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.+||+|||+++....
T Consensus 123 H~dl~p~nili~~~~~~kl~Dfg~~~~~~~-------------------------------------------------- 152 (254)
T cd05083 123 HRDLAARNILVSEDGVAKVSDFGLARVGSM-------------------------------------------------- 152 (254)
T ss_pred ccccCcceEEEcCCCcEEECCCccceeccc--------------------------------------------------
Confidence 999999999999999999999998732110
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
.......+..|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus 153 -------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 201 (254)
T cd05083 153 -------------------------------GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM 201 (254)
T ss_pred -------------------------------cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence 0001123567999999988889999999999999999997 99999988
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+..+....+.......+. .. .+..+.+||.+||+.+|++||++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~~l~~~p~~Rp~~~ 245 (254)
T cd05083 202 SLKEVKECVEKGYRMEPP--EG------CPADVYVLMTSCWETEPKKRPSFH 245 (254)
T ss_pred CHHHHHHHHhCCCCCCCC--Cc------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 777666655543221111 11 123589999999999999999996
No 343
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.6e-39 Score=326.48 Aligned_cols=269 Identities=26% Similarity=0.304 Sum_probs=195.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec---
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA--- 160 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~--- 160 (517)
+|++.+.||+|+||.||+|++.... .+..||+|.+..... .......+.+|+.+++++ +||||+++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~---~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 76 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETS---EEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPG 76 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCC---cCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccc
Confidence 4899999999999999999987621 167899999864321 122344566799999999 59999999986532
Q ss_pred -CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
...+|++|||+ +++|.+++... ..+.... ++.++.||+.||.|||++|
T Consensus 77 ~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~----------------------------~~~~~~qi~~aL~~LH~~g 125 (332)
T cd07857 77 NFNELYLYEELM-EADLHQIIRSG--QPLTDAH----------------------------FQSFIYQILCGLKYIHSAN 125 (332)
T ss_pred cCCcEEEEEecc-cCCHHHHHhcC--CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCC
Confidence 34678999999 57898887543 2233222 2367899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+|||++.++.+||+|||+++.+......
T Consensus 126 ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 161 (332)
T cd07857 126 VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-------------------------------------------- 161 (332)
T ss_pred cccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc--------------------------------------------
Confidence 999999999999999999999999998543211000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.
T Consensus 162 ------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 162 ------------------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred ------------------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 0011223578999999998876 458999999999999999999999998
Q ss_pred CCChHHHHHHHhcCCCCCCC--------------------CCCCCch--hHHhhhhHHHHHHHhccCCcccccCCCCChH
Q 010140 399 GENNEKTLINILKKPLTFPR--------------------IGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSV 456 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~--------------------~~~~~~~--~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ 456 (517)
+.+....+..++......+. ....... .......+.+||.+||+.||.+||++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~---- 287 (332)
T cd07857 212 GKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE---- 287 (332)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHH----
Confidence 87655444433321110000 0000000 001234589999999999999999997
Q ss_pred HhhcCCCcCC
Q 010140 457 EIKRHEFFKG 466 (517)
Q Consensus 457 ell~hp~f~~ 466 (517)
+++.||||+.
T Consensus 288 ~ll~~~~~~~ 297 (332)
T cd07857 288 EALEHPYLAI 297 (332)
T ss_pred HHhcChhhhh
Confidence 9999999964
No 344
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.8e-39 Score=312.24 Aligned_cols=250 Identities=23% Similarity=0.308 Sum_probs=196.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
..+|++.+.||+|+||.||+|.+.. +..+|+|.+...... ...+..|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~------~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLE------KRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERS 72 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeC------CCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCC
Confidence 4689999999999999999998763 357999998754322 234566999999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||+++++|.+++..... .+.... ++.++.|++.||+|||++|++|
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~----------------------------~~~~~~~l~~~l~~lH~~~i~h 123 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQRG-KFSQET----------------------------LLGMCLDVCEGMAYLESSNVIH 123 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCcc-CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999988865421 222222 2367789999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+||+++.++.++|+|||++.......
T Consensus 124 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------------------------------------------------- 154 (256)
T cd05112 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQ------------------------------------------------- 154 (256)
T ss_pred cccccceEEEcCCCeEEECCCcceeecccCc-------------------------------------------------
Confidence 9999999999999999999999874321000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 155 ----------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 206 (256)
T cd05112 155 ----------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS 206 (256)
T ss_pred ----------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 000112235678999999998889999999999999999998 999999887
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.......+..+........ . ...+.+|+.+||+.+|++||++. ++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~--~------~~~~~~l~~~~l~~~p~~Rp~~~----~~l~ 253 (256)
T cd05112 207 NSEVVETINAGFRLYKPRL--A------SQSVYELMQHCWKERPEDRPSFS----LLLH 253 (256)
T ss_pred HHHHHHHHhCCCCCCCCCC--C------CHHHHHHHHHHcccChhhCCCHH----HHHH
Confidence 7777766654422221111 1 12489999999999999999997 7765
No 345
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.2e-39 Score=315.33 Aligned_cols=255 Identities=21% Similarity=0.254 Sum_probs=196.8
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||+|+||.||+|.++..... ....+|+|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~-~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEK-VKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCC-cceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 3457899999999999999999998753221 345799998875532 2344567779999999999999999999887
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...++||||+++|+|.+++..... .++.. .+..++.||+.||+|||++||
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~~-~~~~~----------------------------~~~~~~~qi~~~l~~LH~~~i 130 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHKD-NIGSQ----------------------------YLLNWCVQIAKGMSYLEEKRL 130 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhccC-CCCHH----------------------------HHHHHHHHHHHHHHHHHhCCE
Confidence 788999999999999998876422 12222 223678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.+......
T Consensus 131 ~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~--------------------------------------------- 165 (279)
T cd05057 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE--------------------------------------------- 165 (279)
T ss_pred EecccCcceEEEcCCCeEEECCCcccccccCcccc---------------------------------------------
Confidence 99999999999999999999999998543210000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......++..|+|||.+....++.++|||||||++|||++ |..||.+
T Consensus 166 -------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 166 -------------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred -------------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence 00011124568999999988889999999999999999998 9999998
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
....+....+..... .+.... . ..++.++|.+||..||.+||++.
T Consensus 215 ~~~~~~~~~~~~~~~-~~~~~~-~------~~~~~~~~~~~l~~~p~~Rp~~~ 259 (279)
T cd05057 215 IPAVEIPDLLEKGER-LPQPPI-C------TIDVYMVLVKCWMIDAESRPTFK 259 (279)
T ss_pred CCHHHHHHHHhCCCC-CCCCCC-C------CHHHHHHHHHHcCCChhhCCCHH
Confidence 877776666654322 221111 1 12488999999999999999997
No 346
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.2e-39 Score=324.75 Aligned_cols=262 Identities=26% Similarity=0.340 Sum_probs=196.1
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec-
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA- 160 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~- 160 (517)
..++|++.+.||.|+||.||+|.+.. +++.||+|.+.+.... ......+..|+.+++.++||||++++++|..
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQL-----TGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECC-----CCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 45789999999999999999999886 6788999987643211 1233556679999999999999999999865
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
....|+||||+ +++|..++... .+.... .+.++.||+.||+|||++||
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~----------------------------~~~~~~ql~~aL~~LH~~~i 129 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTSR---PLEKQF----------------------------IQYFLYQILRGLKYVHSAGV 129 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhcC---CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCc
Confidence 56889999999 67898877542 222211 13578999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.++|+|||++....
T Consensus 130 iH~dl~p~Nili~~~~~~~l~dfg~~~~~~-------------------------------------------------- 159 (328)
T cd07856 130 VHRDLKPSNILINENCDLKICDFGLARIQD-------------------------------------------------- 159 (328)
T ss_pred ccCCCCHHHEeECCCCCEEeCccccccccC--------------------------------------------------
Confidence 999999999999999999999999873211
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 160 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 160 -------------------------------PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred -------------------------------CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01122357889999999876 4689999999999999999999999987
Q ss_pred CChHHHHHHHhcCCC--------------------CCCCCCCCCch-h-HHhhhhHHHHHHHhccCCcccccCCCCChHH
Q 010140 400 ENNEKTLINILKKPL--------------------TFPRIGVSSSK-E-FEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~--------------------~~p~~~~~~~~-~-~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~e 457 (517)
.........+..... ..+........ . ......+.++|.+||+.+|++||++. +
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~----e 284 (328)
T cd07856 209 KDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAA----E 284 (328)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHH----H
Confidence 665332222111000 00000000000 0 01223589999999999999999998 9
Q ss_pred hhcCCCcCC
Q 010140 458 IKRHEFFKG 466 (517)
Q Consensus 458 ll~hp~f~~ 466 (517)
++.||||+.
T Consensus 285 ll~~~~~~~ 293 (328)
T cd07856 285 ALAHPYLAP 293 (328)
T ss_pred HhcCCcccc
Confidence 999999963
No 347
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=326.97 Aligned_cols=258 Identities=27% Similarity=0.309 Sum_probs=192.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+++|.-...||+|+||.||+|...+ +..||||.+....... ...|..|+.+|.+++|||+|+|+|||.+.+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~------~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~ 144 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD------GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGG 144 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC------CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCC
Confidence 3789999999999999999999875 3789999887653221 344888999999999999999999999888
Q ss_pred -eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC--
Q 010140 163 -YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG-- 239 (517)
Q Consensus 163 -~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-- 239 (517)
..+||+||+++|+|.+++...... +...... .+|+.++|+||+|||...
T Consensus 145 ~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R--------------------------~kIa~g~A~gL~yLH~~~~~ 196 (361)
T KOG1187|consen 145 EHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETR--------------------------LKIALGAARGLAYLHEGCPP 196 (361)
T ss_pred ceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHH--------------------------HHHHHHHHHHHHHHccCCCC
Confidence 599999999999999988765322 2222211 268999999999999864
Q ss_pred -ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 240 -IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 240 -iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|||||||++|||+|.++.+||+|||+|+.....
T Consensus 197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~---------------------------------------------- 230 (361)
T KOG1187|consen 197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG---------------------------------------------- 230 (361)
T ss_pred CEecCCCCHHHeeECCCCCEEccCccCcccCCcc----------------------------------------------
Confidence 999999999999999999999999998432210
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCccc-CCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF-VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
....... .||.+|+|||++.....+.++|||||||+|.||++|+.+.
T Consensus 231 --------------------------------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~ 278 (361)
T KOG1187|consen 231 --------------------------------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAV 278 (361)
T ss_pred --------------------------------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCccc
Confidence 0000111 6999999999999888999999999999999999999988
Q ss_pred CCCC---h---HHHHHHHhcCC-C-CC--CCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCCh
Q 010140 398 KGEN---N---EKTLINILKKP-L-TF--PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGS 455 (517)
Q Consensus 398 ~~~~---~---~~~~~~i~~~~-~-~~--p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~ 455 (517)
+... . .+.....+... . .+ |..........++...+..+..+|++.+|.+||++.+.+
T Consensus 279 d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 279 DQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred CCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 7532 1 11111122211 1 11 111101111113455688999999999999999997433
No 348
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.9e-39 Score=313.82 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=183.4
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|+.... .+...+|+|.+...... .....+.+|+.+++.++||||+++++++.+....|+|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSG---YTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCC---CCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEE
Confidence 3699999999999987642 24567999988654321 223456779999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCc-cCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 170 YCPGGDLYAARQRQPGKR-FGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
|+++|+|.+++....... ..... ..++.++.|++.||+|||++|++||||||+
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~--------------------------~~~~~~~~qi~~al~~lH~~~i~H~dlkp~ 129 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDP--------------------------TTLQRMACEIALGLLHLHKNNFIHSDLALR 129 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccH--------------------------HHHHHHHHHHHHHHHHHHHCCEeccccCcc
Confidence 999999999987542211 11111 112367899999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
||+++.++.+||+|||+++.......
T Consensus 130 nil~~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------------ 155 (269)
T cd05087 130 NCLLTADLTVKIGDYGLSHNKYKEDY------------------------------------------------------ 155 (269)
T ss_pred eEEEcCCCcEEECCccccccccCcce------------------------------------------------------
Confidence 99999999999999998732110000
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-------CCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-------GHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-------~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
........|+..|+|||++.+. .++.++|||||||++|||++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 156 ----------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ----------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 0011223578889999998643 35789999999999999996 99999877
Q ss_pred ChHHHHHHHhcC-CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKK-PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
...+........ ....+...... .....+.++|.+|+ .+|++||++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~ 261 (269)
T cd05087 214 SDEQVLTYTVREQQLKLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAE 261 (269)
T ss_pred ChHHHHHHHhhcccCCCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHH
Confidence 666554443322 22222211110 11124789999999 6899999997
No 349
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-40 Score=339.14 Aligned_cols=262 Identities=28% Similarity=0.447 Sum_probs=212.7
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 158 (517)
....+-|+++..||.|.+|.||+++.++ +++..|+|+..... ..-+.++.|..||+.+ +|||++.+|++|
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~-----~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVK-----TGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeee-----cCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3456789999999999999999999988 67788999886553 2234455588888887 799999999998
Q ss_pred e-----cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHH
Q 010140 159 E-----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALE 233 (517)
Q Consensus 159 ~-----~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 233 (517)
. .++.+|||||||.||+.-++++...+.++.+..+. .|++.++.||.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~Ia----------------------------YI~re~lrgl~ 137 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIA----------------------------YILREILRGLA 137 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHH----------------------------HHHHHHHHHHH
Confidence 5 46789999999999999999987764444443332 77899999999
Q ss_pred HHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 234 YLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 234 yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
+||.+.+||||||-.|||++.+|.|||+|||++..++.
T Consensus 138 HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds------------------------------------------ 175 (953)
T KOG0587|consen 138 HLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS------------------------------------------ 175 (953)
T ss_pred HHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeec------------------------------------------
Confidence 99999999999999999999999999999999844331
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-----CCCccchHHHHHHHHH
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-----GHGSAVDWWTLGVFLY 388 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-----~~~~~~DiWSlGvil~ 388 (517)
...+..+++|||.|||||++... .|+..+|+||||++..
T Consensus 176 ------------------------------------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaI 219 (953)
T KOG0587|consen 176 ------------------------------------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAI 219 (953)
T ss_pred ------------------------------------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceee
Confidence 12345678999999999999753 3688999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 389 EMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 389 elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
||.-|.+|+.+..+...+..|-..+++-...... | ..++.++|..||.+|-++||+.. ++|+|||++.
T Consensus 220 EladG~PPl~DmHPmraLF~IpRNPPPkLkrp~k----W--s~~FndFIs~cL~Kd~e~RP~~~----~ll~hpFi~e 287 (953)
T KOG0587|consen 220 EMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKK----W--SKKFNDFISTCLVKDYEQRPSTE----ELLKHPFITE 287 (953)
T ss_pred hhcCCCCCccCcchhhhhccCCCCCCccccchhh----H--HHHHHHHHHHHHhhccccCcchh----hhccCCcccc
Confidence 9999999999988877777665554322221111 2 23589999999999999999998 9999999973
No 350
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.9e-39 Score=318.25 Aligned_cols=260 Identities=28% Similarity=0.431 Sum_probs=197.2
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCcee
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYS 164 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~ 164 (517)
|++.+.||+|+||.||+|+... +++.||||.+...... .......+|+..+++++ ||||+++++++..++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 73 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKE-----TGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDEL 73 (283)
T ss_pred CeeheeeccCCceEEEEEEECC-----CCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcE
Confidence 6789999999999999999876 5688999998654321 11122345888999998 99999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+ +|+|.+++.......++.... ..++.||+.||.|||++|++|+|
T Consensus 74 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~l~~~l~~Lh~~~i~H~d 124 (283)
T cd07830 74 YFVFEYM-EGNLYQLMKDRKGKPFSESVI----------------------------RSIIYQILQGLAHIHKHGFFHRD 124 (283)
T ss_pred EEEEecC-CCCHHHHHHhcccccCCHHHH----------------------------HHHHHHHHHHHHHHHHCCcccCC
Confidence 9999999 889998887653223332222 36789999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|||+||+++.++.++|+|||+++.....
T Consensus 125 l~~~ni~i~~~~~~~l~d~~~~~~~~~~---------------------------------------------------- 152 (283)
T cd07830 125 LKPENLLVSGPEVVKIADFGLAREIRSR---------------------------------------------------- 152 (283)
T ss_pred CChhhEEEcCCCCEEEeecccceeccCC----------------------------------------------------
Confidence 9999999999999999999987432110
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCChH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~ 403 (517)
.......|+..|+|||++.+. .++.++|+|||||++|+|++|++||......
T Consensus 153 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~ 205 (283)
T cd07830 153 ---------------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI 205 (283)
T ss_pred ---------------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH
Confidence 001223578899999988654 4789999999999999999999999887766
Q ss_pred HHHHHHhcCCCC-------------------CCCCCCCCchhH--HhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 404 KTLINILKKPLT-------------------FPRIGVSSSKEF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 404 ~~~~~i~~~~~~-------------------~p~~~~~~~~~~--~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
+.+.++...... .+.......... ....++.+||.+||+.||++||++. |++.||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~----ei~~~~ 281 (283)
T cd07830 206 DQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS----QALQHP 281 (283)
T ss_pred HHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHH----HHhhCC
Confidence 555444321100 000000000000 1124689999999999999999998 999999
Q ss_pred Cc
Q 010140 463 FF 464 (517)
Q Consensus 463 ~f 464 (517)
||
T Consensus 282 ~~ 283 (283)
T cd07830 282 YF 283 (283)
T ss_pred CC
Confidence 97
No 351
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.4e-40 Score=328.91 Aligned_cols=270 Identities=29% Similarity=0.398 Sum_probs=199.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeec-
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA- 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~- 160 (517)
.++|++.+.||+|+||.||+|.+.. +++.+|+|.+.+.... ......+.+|+.+++++ +||||+++++++..
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~vK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRR-----TKEVVALKKIFDAFRN-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcC-----CCeEEEEEeeccccCc-chhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 4689999999999999999999876 5688999988543111 12234556799999999 99999999998864
Q ss_pred -CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
....|+||||++ ++|..++... .+... ..+.++.||+.||+|||++|
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~----------------------------~~~~i~~qi~~~L~~LH~~~ 127 (337)
T cd07852 80 NDKDIYLVFEYME-TDLHAVIRAN---ILEDV----------------------------HKRYIMYQLLKALKYIHSGN 127 (337)
T ss_pred CCceEEEEecccc-cCHHHHHhcC---CCCHH----------------------------HHHHHHHHHHHHHHHHHHCC
Confidence 346899999996 5998877542 11111 11357899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.+||+|||+++........
T Consensus 128 i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~-------------------------------------------- 163 (337)
T cd07852 128 VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN-------------------------------------------- 163 (337)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccchhcccccccc--------------------------------------------
Confidence 999999999999999999999999998543210000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
..........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.
T Consensus 164 -----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 164 -----------------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP 214 (337)
T ss_pred -----------------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 000112234689999999988654 47889999999999999999999998
Q ss_pred CCChHHHHHHHhcCCCCCC--------------------CCCCCCchh--HHhhhhHHHHHHHhccCCcccccCCCCChH
Q 010140 399 GENNEKTLINILKKPLTFP--------------------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSV 456 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p--------------------~~~~~~~~~--~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ 456 (517)
+....+...++.......+ ......... .....++.+||.+||+.||++||++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~---- 290 (337)
T cd07852 215 GTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAE---- 290 (337)
T ss_pred CCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHH----
Confidence 8766555444432211100 000000000 01234589999999999999999998
Q ss_pred HhhcCCCcCCC
Q 010140 457 EIKRHEFFKGI 467 (517)
Q Consensus 457 ell~hp~f~~~ 467 (517)
++++||||+..
T Consensus 291 ~il~~~~~~~~ 301 (337)
T cd07852 291 EALEHPYVAQF 301 (337)
T ss_pred HHhhChhhhhh
Confidence 99999999875
No 352
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.7e-39 Score=315.61 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=184.8
Q ss_pred CCc-eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--
Q 010140 84 DHF-RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-- 160 (517)
Q Consensus 84 ~~y-~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-- 160 (517)
++| ++++.||+|+||+||++...... ...++.||+|++..... ......+.+|+.+|+.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPAN-DGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEcccc-CCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 345 99999999999999998754321 12567899999875421 1233456679999999999999999998764
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...+|+||||+++|+|.+++... .+++.. ++.++.|++.||+|||++||
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~----------------------------~~~i~~~l~~~l~~lH~~~i 128 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH---KLNLAQ----------------------------LLLFAQQICEGMAYLHSQHY 128 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc---CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCe
Confidence 44689999999999999988653 232222 23678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++........
T Consensus 129 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 163 (283)
T cd05080 129 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------------------- 163 (283)
T ss_pred eccccChheEEEcCCCcEEEeecccccccCCcchh---------------------------------------------
Confidence 99999999999999999999999998543210000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
........++..|+|||.+.+..++.++|||||||++|||++|..||...
T Consensus 164 ------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 213 (283)
T cd05080 164 ------------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP 213 (283)
T ss_pred ------------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence 00001123566799999998888999999999999999999999998654
Q ss_pred ChH--HHH------------HHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNE--KTL------------INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~--~~~------------~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
... +.. ..........+. .. ..+..+.+|+.+||+.||++||++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~li~~cl~~~p~~Rps~~ 272 (283)
T cd05080 214 PKKFEEMIGPKQGQMTVVRLIELLERGMRLPC-PK------NCPQEVYILMKNCWETEAKFRPTFR 272 (283)
T ss_pred cchhhhhhcccccccchhhhhhhhhcCCCCCC-CC------CCCHHHHHHHHHHhccChhhCCCHH
Confidence 321 000 001111111110 00 1223589999999999999999997
No 353
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.8e-39 Score=312.21 Aligned_cols=252 Identities=26% Similarity=0.316 Sum_probs=193.9
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|.+.+.||+|+||.||+|.+..... ....||||....... ....+.+..|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~- 78 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPEN--EKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE- 78 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCC--CCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-
Confidence 44679999999999999999998765311 345689998865431 1334567779999999999999999998875
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
...|+||||+++|+|.+++.... ..+.... +..++.||+.||+|||++|++
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~----------------------------~~~~~~~l~~~l~~lH~~~~~ 129 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK-YSLDLAS----------------------------LILYSYQLSTALAYLESKRFV 129 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHH----------------------------HHHHHHHHHHHHHHHHhCCee
Confidence 45789999999999999987642 1222221 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.+||+|||+++.......
T Consensus 130 H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 162 (270)
T cd05056 130 HRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY----------------------------------------------- 162 (270)
T ss_pred ccccChheEEEecCCCeEEccCceeeecccccc-----------------------------------------------
Confidence 999999999999999999999999843321000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGE 400 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~ 400 (517)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 163 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~ 212 (270)
T cd05056 163 ------------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGV 212 (270)
T ss_pred ------------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 00011234568999999988889999999999999999996 99999988
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
...+....+..+...... .. .+..+.+||.+||..+|.+||++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~--~~------~~~~~~~li~~~l~~~P~~Rpt~~ 256 (270)
T cd05056 213 KNNDVIGRIENGERLPMP--PN------CPPTLYSLMTKCWAYDPSKRPRFT 256 (270)
T ss_pred CHHHHHHHHHcCCcCCCC--CC------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 877766666554322111 11 122589999999999999999997
No 354
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.8e-39 Score=313.91 Aligned_cols=263 Identities=16% Similarity=0.178 Sum_probs=197.4
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|++.+.||+|+||.||+|.+..... .....|++|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~-~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 79 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKP-GKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIE 79 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCC-CceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 345789999999999999999999876321 135789999886432 12335667779999999999999999997655
Q ss_pred -CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
+...++++||+++|+|.+++......... .........+..++.||+.||+|||+++
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 137 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEAN----------------------NPQALSTQQLVHMAIQIACGMSYLHKRG 137 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccc----------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 57789999999999999998764322100 0001112223467899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
++||||||+||+++.++.+||+|||+++.+......
T Consensus 138 i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------------------------------------- 173 (280)
T cd05043 138 VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-------------------------------------------- 173 (280)
T ss_pred EeecccCHhhEEEcCCCcEEECCCCCcccccCCceE--------------------------------------------
Confidence 999999999999999999999999998543210000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
.......++..|+|||++.+..++.++|||||||++||+++ |+.||.
T Consensus 174 --------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 221 (280)
T cd05043 174 --------------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYV 221 (280)
T ss_pred --------------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcC
Confidence 00011235678999999998889999999999999999998 999999
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
..+..+....+.... ..+.. .. .+..+.+++.+||..||++||++.
T Consensus 222 ~~~~~~~~~~~~~~~-~~~~~-~~------~~~~~~~li~~~l~~~p~~Rps~~ 267 (280)
T cd05043 222 EIDPFEMAAYLKDGY-RLAQP-IN------CPDELFAVMACCWALDPEERPSFS 267 (280)
T ss_pred cCCHHHHHHHHHcCC-CCCCC-Cc------CCHHHHHHHHHHcCCChhhCCCHH
Confidence 877766555544432 22211 11 122589999999999999999997
No 355
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1e-39 Score=319.75 Aligned_cols=261 Identities=30% Similarity=0.427 Sum_probs=200.0
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
|++.+.||+|+||.||+|+... +++.||+|++..... .......+..|+.+++.++|+||+++++++.+.+..|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~-----~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKK-----TGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecC-----CCcEEEEEEeccccc-cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceE
Confidence 6778899999999999999886 678999999976531 1233455667999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+||||++ ++|.+++.... ..+.... +..++.|++.||+|||++||+||||
T Consensus 75 ~v~e~~~-~~l~~~i~~~~-~~~~~~~----------------------------~~~~~~~i~~~l~~LH~~~i~H~~l 124 (282)
T cd07829 75 LVFEYCD-MDLKKYLDKRP-GPLSPNL----------------------------IKSIMYQLLRGLAYCHSHRILHRDL 124 (282)
T ss_pred EEecCcC-cCHHHHHHhhc-cCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCcccCCC
Confidence 9999996 59999887642 1222222 2367899999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
+|+||+++.++.++|+|||+++......
T Consensus 125 ~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------------------------------------------- 152 (282)
T cd07829 125 KPQNILINRDGVLKLADFGLARAFGIPL---------------------------------------------------- 152 (282)
T ss_pred ChheEEEcCCCCEEEecCCcccccCCCc----------------------------------------------------
Confidence 9999999999999999999874322100
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCChHH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~ 404 (517)
.......++..|+|||.+.+. .++.++|||||||++|||++|.+||.+.+..+
T Consensus 153 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 206 (282)
T cd07829 153 --------------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID 206 (282)
T ss_pred --------------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 011122467789999999876 68999999999999999999999999887666
Q ss_pred HHHHHhcCC------------------CCCCCCCCCCc-hhH-HhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 405 TLINILKKP------------------LTFPRIGVSSS-KEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 405 ~~~~i~~~~------------------~~~p~~~~~~~-~~~-~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
.+.++.... ..++....... ..+ .....+.++|.+||..||++||++. +++.||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~----~~l~~p~~ 282 (282)
T cd07829 207 QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAK----EALKHPYF 282 (282)
T ss_pred HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHH----HHhhCcCC
Confidence 555443211 01111100000 000 1133589999999999999999998 99999998
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.6e-39 Score=314.53 Aligned_cols=243 Identities=23% Similarity=0.284 Sum_probs=183.4
Q ss_pred eeeeccceeEEEEEEEecCCC--CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMV--GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~--~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 167 (517)
+.||+|+||.||+|.++.... ......+|+|.+.... ......+..|+.+++.++||||+++++++..+...++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 369999999999998865221 1234568888886543 23344566799999999999999999999999999999
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCC
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKP 247 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp 247 (517)
|||+++|+|..++..... .+.... ...++.||+.||+|||++||+||||||
T Consensus 78 ~e~~~~g~L~~~l~~~~~-~~~~~~----------------------------~~~~~~qi~~~l~~lH~~~iiH~dlkp 128 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN-LINISW----------------------------KLEVAKQLAWALHFLEDKGLTHGNVCA 128 (258)
T ss_pred EecCCCCcHHHHHhcCCC-CCCHHH----------------------------HHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence 999999999999876431 122211 136789999999999999999999999
Q ss_pred CceEEccCCc--------EEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 248 ENVLVREDGH--------IMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 248 ~NILl~~~~~--------vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
+|||++.++. ++++|||++....
T Consensus 129 ~nili~~~~~~~~~~~~~~~l~d~g~~~~~~------------------------------------------------- 159 (258)
T cd05078 129 KNVLLIREEDRKTGNPPFIKLSDPGISITVL------------------------------------------------- 159 (258)
T ss_pred ceEEEecccccccCCCceEEecccccccccC-------------------------------------------------
Confidence 9999987765 6899999863211
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhC-CCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYG-TTPF 397 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG-~~Pf 397 (517)
......+++.|+|||++.+. .++.++|||||||++|+|++| ..||
T Consensus 160 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~ 206 (258)
T cd05078 160 ---------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPL 206 (258)
T ss_pred ---------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCCh
Confidence 01123578899999999874 479999999999999999998 5666
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
...+...... +.......|... ..++.+||.+||+.||++||++. ++++
T Consensus 207 ~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~li~~~l~~~p~~Rps~~----~il~ 255 (258)
T cd05078 207 SALDSQKKLQ-FYEDRHQLPAPK---------WTELANLINQCMDYEPDFRPSFR----AIIR 255 (258)
T ss_pred hhccHHHHHH-HHHccccCCCCC---------cHHHHHHHHHHhccChhhCCCHH----HHHH
Confidence 6655544332 333333333211 12489999999999999999997 7765
No 357
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.9e-39 Score=315.15 Aligned_cols=258 Identities=23% Similarity=0.292 Sum_probs=189.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC--c
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--H 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~ 162 (517)
-|++++.||+|+||.||+|+..... ..+++.||+|.+..... ......+.+|+.+++.++||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCC-CCccceEEEEEcCcccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4789999999999999999864321 12578899999874421 23345677899999999999999999998765 5
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|+||||++|++|.+++.... ..++.... ..++.||+.||+|||++||+|
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~----------------------------~~i~~~i~~aL~~lH~~gi~H 132 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQ----------------------------LKYAVQICKGMDYLGSRQYVH 132 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHH----------------------------HHHHHHHHHHHHHHHHCCeee
Confidence 7899999999999999886542 12222222 267899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|||||+|||++.++.++|+|||+++.+......
T Consensus 133 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 165 (284)
T cd05079 133 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEY----------------------------------------------- 165 (284)
T ss_pred cccchheEEEcCCCCEEECCCccccccccCccc-----------------------------------------------
Confidence 999999999999999999999998433210000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC-
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN- 401 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~- 401 (517)
........|+..|+|||++.+..++.++|||||||++|+|+++..|+....
T Consensus 166 ----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~ 217 (284)
T cd05079 166 ----------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT 217 (284)
T ss_pred ----------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc
Confidence 000112357778999999998889999999999999999999877653211
Q ss_pred -------------hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 -------------NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 -------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
...............+... ..+..+.+||.+||+.||++||++. ++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rpt~~----~il~ 278 (284)
T cd05079 218 LFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPP-------NCPEEVYQLMRKCWEFQPSKRTTFQ----NLIE 278 (284)
T ss_pred hhhhhcccccccccHHHHHHHHHcCccCCCCC-------CCCHHHHHHHHHHccCCcccCcCHH----HHHH
Confidence 1111111122111111111 1223589999999999999999997 6664
No 358
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6.4e-39 Score=309.57 Aligned_cols=255 Identities=25% Similarity=0.341 Sum_probs=200.0
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
+++++.||.|+||.||+|++..... .....||+|++...... .....+..|+.+++.++|+||+++++++.+.+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 4678899999999999999986321 13488999999755322 24556777999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
++|||+++++|.+++.......+++.. +..++.||+.||+|||++|++||||
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~----------------------------~~~~~~ql~~~l~~lh~~~~~h~dl 129 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSD----------------------------LLSFALQIARGMEYLESKNFIHRDL 129 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHH----------------------------HHHHHHHHHHHHHHHhcCCeeeccc
Confidence 999999999999998764322232222 2367899999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
||+||+++.++.++|+|||+++.......
T Consensus 130 ~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 158 (258)
T smart00219 130 AARNCLVGENLVVKISDFGLSRDLYDDDY--------------------------------------------------- 158 (258)
T ss_pred ccceEEEccCCeEEEcccCCceecccccc---------------------------------------------------
Confidence 99999999999999999999844321100
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEK 404 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~ 404 (517)
.......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+...
T Consensus 159 --------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 --------------------------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred --------------------------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 00001126789999999988889999999999999999998 899998877777
Q ss_pred HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 405 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
....+.......... . .+.++.+++.+||..||++|||+. |+++
T Consensus 213 ~~~~~~~~~~~~~~~--~------~~~~~~~~i~~~l~~~p~~Rpt~~----~ll~ 256 (258)
T smart00219 213 VLEYLKKGYRLPKPE--N------CPPEIYKLMLQCWAEDPEDRPTFS----ELVE 256 (258)
T ss_pred HHHHHhcCCCCCCCC--c------CCHHHHHHHHHHCcCChhhCcCHH----HHHh
Confidence 777766554322111 1 223589999999999999999997 7764
No 359
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=9.7e-39 Score=307.30 Aligned_cols=241 Identities=22% Similarity=0.298 Sum_probs=186.0
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
+.||+|+||.||+|... .+..+|+|++...... .....+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~ig~g~~g~vy~~~~~------~~~~~a~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK------DKTPVAVKTCKEDLPQ--ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEec------CCcEEEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEE
Confidence 36999999999999864 3568999998654321 223356779999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|+++++|.+++.... ..+... .+..++.|++.||.|||++|++||||||+|
T Consensus 73 ~~~~~~L~~~~~~~~-~~~~~~----------------------------~~~~~~~~i~~~l~~lH~~~~~H~dl~p~n 123 (250)
T cd05085 73 LVPGGDFLSFLRKKK-DELKTK----------------------------QLVKFALDAAAGMAYLESKNCIHRDLAARN 123 (250)
T ss_pred CCCCCcHHHHHHhcC-CCCCHH----------------------------HHHHHHHHHHHHHHHHHhCCeeecccChhe
Confidence 999999999886532 112211 123677899999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
|+++.++.+||+|||++.......
T Consensus 124 ili~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------------- 147 (250)
T cd05085 124 CLVGENNVLKISDFGMSRQEDDGI-------------------------------------------------------- 147 (250)
T ss_pred EEEcCCCeEEECCCccceeccccc--------------------------------------------------------
Confidence 999999999999999873221000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 408 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~ 408 (517)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.........
T Consensus 148 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~ 206 (250)
T cd05085 148 ---------------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ 206 (250)
T ss_pred ---------------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 000011134567999999988889999999999999999998 9999998877666666
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+...... .... ..+.++.+|+.+||..+|++||++.
T Consensus 207 ~~~~~~~--~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~ 242 (250)
T cd05085 207 VEKGYRM--SCPQ------KCPDDVYKVMQRCWDYKPENRPKFS 242 (250)
T ss_pred HHcCCCC--CCCC------CCCHHHHHHHHHHcccCcccCCCHH
Confidence 5543211 1111 1123589999999999999999997
No 360
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.8e-39 Score=312.79 Aligned_cols=257 Identities=21% Similarity=0.262 Sum_probs=187.8
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|++.+.. ....+|+|.+..... ......+..|+.++.++ +||||+++++++...+..|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~---~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCC---CeeEEEEEEccccCC--HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEE
Confidence 36899999999999987621 123578888864211 13334666799999999 8999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||+++|+|.+++.............. ............++.++.|++.||+|||++|++||||||+
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~--------------~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~ 141 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAI--------------ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 141 (270)
T ss_pred EeCCCCcHHHHHHhcccccccccccc--------------ccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccc
Confidence 99999999999876432111000000 0000011223334578999999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||++......
T Consensus 142 nili~~~~~~kl~dfgl~~~~~~~-------------------------------------------------------- 165 (270)
T cd05047 142 NILVGENYVAKIADFGLSRGQEVY-------------------------------------------------------- 165 (270)
T ss_pred eEEEcCCCeEEECCCCCccccchh--------------------------------------------------------
Confidence 999999999999999987311100
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLI 407 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~ 407 (517)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+...
T Consensus 166 -----------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~ 222 (270)
T cd05047 166 -----------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 222 (270)
T ss_pred -----------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHH
Confidence 00001124567999999988889999999999999999997 999998877776666
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+..... .+. .. ....++.+|+.+||..||.+||++.
T Consensus 223 ~~~~~~~-~~~-~~------~~~~~~~~li~~~l~~~p~~Rps~~ 259 (270)
T cd05047 223 KLPQGYR-LEK-PL------NCDDEVYDLMRQCWREKPYERPSFA 259 (270)
T ss_pred HHhCCCC-CCC-CC------cCCHHHHHHHHHHcccChhhCCCHH
Confidence 6544321 111 11 1123589999999999999999997
No 361
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.2e-40 Score=323.61 Aligned_cols=270 Identities=25% Similarity=0.359 Sum_probs=212.4
Q ss_pred hhcCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC------CC
Q 010140 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD------HP 149 (517)
Q Consensus 76 ~~~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~------Hp 149 (517)
..-+++..++|.+....|+|-||+|..|.+.. .+..||||+|..+... .+.=.+|++||++|+ --
T Consensus 424 v~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~-----r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 424 VRIGELLDSRYEVQGYTGKGVFSTVVRARDQA-----RGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred EehhhhhcceeEEEeccccceeeeeeeccccC-----CCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhh
Confidence 33445667899999999999999999999887 4568999999877543 233345999999994 34
Q ss_pred CccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHH
Q 010140 150 FLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETL 229 (517)
Q Consensus 150 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~ 229 (517)
|+++|+-.|...+++|||+|-+ ..+|.+.+...+. ..++ ....+|.|+.||.
T Consensus 495 Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~-nvGL--------------------------~ikaVRsYaqQLf 546 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR-NVGL--------------------------HIKAVRSYAQQLF 546 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCc-ccce--------------------------eehHHHHHHHHHH
Confidence 8999999999999999999999 6799999987542 2221 1123468999999
Q ss_pred HHHHHHHhcCceeccCCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccc
Q 010140 230 LALEYLHMMGIVYRDLKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFS 308 (517)
Q Consensus 230 ~aL~yLH~~~iiHrDLKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (517)
.||..|-..||+|.||||+|||+++. ..+||||||.|.....
T Consensus 547 lALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e------------------------------------- 589 (752)
T KOG0670|consen 547 LALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE------------------------------------- 589 (752)
T ss_pred HHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc-------------------------------------
Confidence 99999999999999999999999865 4789999998732221
Q ss_pred ccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHH
Q 010140 309 SVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLY 388 (517)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ 388 (517)
...+.+.-+..|.|||++.|.+|+...|+||+||+||
T Consensus 590 -------------------------------------------neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLY 626 (752)
T KOG0670|consen 590 -------------------------------------------NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLY 626 (752)
T ss_pred -------------------------------------------ccccHHHHHHhccCcceeecCcccCCccceeeceeeE
Confidence 1122334567899999999999999999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHHhcCCCCCCCCC------------------------------------------------
Q 010140 389 EMLYGTTPFKGENNEKTLINILKKPLTFPRIG------------------------------------------------ 420 (517)
Q Consensus 389 elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~------------------------------------------------ 420 (517)
||.||+..|.|.++..++...+.....+|...
T Consensus 627 ElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~ 706 (752)
T KOG0670|consen 627 ELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELI 706 (752)
T ss_pred EeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHh
Confidence 99999999999988877765544333333211
Q ss_pred ---CCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 421 ---VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 421 ---~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
.....+.....++++||.+||..||++|+|.. ++|+||||.+
T Consensus 707 ~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n----qAL~HpFi~~ 751 (752)
T KOG0670|consen 707 AVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN----QALKHPFITE 751 (752)
T ss_pred ccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH----HHhcCCcccC
Confidence 01122234455789999999999999999998 9999999974
No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-38 Score=308.96 Aligned_cols=252 Identities=19% Similarity=0.237 Sum_probs=186.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee-cCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE-ASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~lV~ 168 (517)
+.||+|+||.||+|.+..... ....+|+|.+..... ......+.+|+.+++.++||||+++++++. .++..|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~--~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDG--QKIHCAVKSLNRITD--LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCC--ceEEEEEEecCccCC--HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence 368999999999999764321 346799998854211 123456667999999999999999999764 566789999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||+.+|+|.+++...... ... ..+..++.||+.||+|||+++|+||||||+
T Consensus 77 e~~~~~~L~~~~~~~~~~-~~~----------------------------~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~ 127 (262)
T cd05058 77 PYMKHGDLRNFIRSETHN-PTV----------------------------KDLIGFGLQVAKGMEYLASKKFVHRDLAAR 127 (262)
T ss_pred ecCCCCCHHHHHHhcCCC-CCH----------------------------HHHHHHHHHHHHHHHHHHhCCccccccCcc
Confidence 999999999998754211 111 112367889999999999999999999999
Q ss_pred ceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 010140 249 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 328 (517)
Q Consensus 249 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (517)
|||++.++.+||+|||+++........
T Consensus 128 nili~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------------- 154 (262)
T cd05058 128 NCMLDESFTVKVADFGLARDIYDKEYY----------------------------------------------------- 154 (262)
T ss_pred eEEEcCCCcEEECCccccccccCCcce-----------------------------------------------------
Confidence 999999999999999998432210000
Q ss_pred ccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 010140 329 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLI 407 (517)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~ 407 (517)
.........++..|+|||.+.+..++.++|||||||++|||++ |.+||...+..+...
T Consensus 155 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~ 213 (262)
T cd05058 155 ---------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITV 213 (262)
T ss_pred ---------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 0000112246778999999988889999999999999999999 567787777666665
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.+......... .. .+..+.+++.+||..+|++||++. ++++
T Consensus 214 ~~~~~~~~~~~--~~------~~~~~~~li~~cl~~~p~~Rp~~~----~il~ 254 (262)
T cd05058 214 YLLQGRRLLQP--EY------CPDPLYEVMLSCWHPKPEMRPTFS----ELVS 254 (262)
T ss_pred HHhcCCCCCCC--Cc------CCHHHHHHHHHHcCCChhhCCCHH----HHHH
Confidence 55543221111 11 112489999999999999999997 6554
No 363
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.1e-39 Score=310.44 Aligned_cols=244 Identities=20% Similarity=0.232 Sum_probs=182.2
Q ss_pred eeeeccceeEEEEEEEecCCC-------CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 90 RRLGSGDIGNVYLCQIRNPMV-------GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~-------~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+.||+|+||.||+|+...... ......+|+|++..... .....+..|+.+++.++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR---DISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh---hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998643211 11334689998875432 33445667899999999999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..++||||+++|+|..++.... ..+.... ...++.||+.||+|||++||+|
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~----------------------------~~~i~~qi~~~l~~lH~~~ivH 128 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS-DVLTTPW----------------------------KFKVAKQLASALSYLEDKDLVH 128 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC-CCCCHHH----------------------------HHHHHHHHHHHHHHhhhCCeEC
Confidence 9999999999999988776432 1222222 2367899999999999999999
Q ss_pred ccCCCCceEEccCCc-------EEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 243 RDLKPENVLVREDGH-------IMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 243 rDLKp~NILl~~~~~-------vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
|||||+|||++.++. ++++|||++.....
T Consensus 129 ~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------------------------------- 164 (262)
T cd05077 129 GNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------------------------------------------- 164 (262)
T ss_pred CCCCcccEEEecCCccCCCCceeEeCCCCCCccccC--------------------------------------------
Confidence 999999999987664 89999998732110
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc-CCCCCccchHHHHHHHHHHHh-hC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEML-YG 393 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~-~~~~~~~~DiWSlGvil~ell-tG 393 (517)
.....|+..|+|||.+. +..++.++|||||||++|||+ .|
T Consensus 165 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~ 206 (262)
T cd05077 165 --------------------------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNG 206 (262)
T ss_pred --------------------------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 11235788899999987 456899999999999999998 58
Q ss_pred CCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 394 TTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
..||......+.. ........... +. ..++.+||.+||+.||.+||++. +|+++
T Consensus 207 ~~p~~~~~~~~~~-~~~~~~~~~~~---~~------~~~~~~li~~cl~~dp~~Rp~~~----~il~~ 260 (262)
T cd05077 207 EIPLKDKTLAEKE-RFYEGQCMLVT---PS------CKELADLMTHCMNYDPNQRPFFR----AIMRD 260 (262)
T ss_pred CCCCCCcchhHHH-HHHhcCccCCC---CC------hHHHHHHHHHHcCCChhhCcCHH----HHHHh
Confidence 8998776544332 22222221111 11 12489999999999999999997 88764
No 364
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5e-39 Score=312.83 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=190.1
Q ss_pred eeeeccceeEEEEEEEecCC-CCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPM-VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 168 (517)
+.||+|+||.||+|+..... .+..++.+|||.+.+... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36999999999999987532 112346899998865421 123456677999999999999999999999999999999
Q ss_pred EecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC
Q 010140 169 EYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE 248 (517)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~ 248 (517)
||+++++|.+++.......... .......+..++.||+.||+|||+++++|+||||+
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~ 135 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGP-----------------------PLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAAR 135 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCC-----------------------ccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 9999999999987642211000 00111223467899999999999999999999999
Q ss_pred ceEEccCC-----cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 249 NVLVREDG-----HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 249 NILl~~~~-----~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
||+++.++ .++|+|||+++.+.....
T Consensus 136 nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------- 166 (269)
T cd05044 136 NCLVSEKGYDADRVVKIGDFGLARDIYKSDY------------------------------------------------- 166 (269)
T ss_pred eEEEecCCCCCCcceEECCcccccccccccc-------------------------------------------------
Confidence 99999877 899999999843221000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCCh
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENN 402 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~ 402 (517)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 167 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~ 219 (269)
T cd05044 167 ---------------------------YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219 (269)
T ss_pred ---------------------------cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH
Confidence 000112245678999999998889999999999999999998 9999988777
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+....+...... .. .. ..+..+.+||.+||..+|.+||++.
T Consensus 220 ~~~~~~~~~~~~~-~~-~~------~~~~~~~~li~~~l~~~p~~Rp~~~ 261 (269)
T cd05044 220 QEVLQHVTAGGRL-QK-PE------NCPDKIYQLMTNCWAQDPSERPTFD 261 (269)
T ss_pred HHHHHHHhcCCcc-CC-cc------cchHHHHHHHHHHcCCCcccCCCHH
Confidence 6666655433211 11 11 1123589999999999999999997
No 365
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.8e-38 Score=309.07 Aligned_cols=248 Identities=18% Similarity=0.254 Sum_probs=182.1
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEe
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 170 (517)
.||+|+||.||+|+..... ....+++|.+..... ......+.+|+.+++.++||||+++++.+......|+||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~---~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDT---GVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCC---CcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEec
Confidence 6999999999999865421 234567777654322 12345677799999999999999999999999999999999
Q ss_pred cCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCce
Q 010140 171 CPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENV 250 (517)
Q Consensus 171 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NI 250 (517)
+++|+|.+++........... ...++.++.||+.||+|||+++|+||||||+||
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~--------------------------~~~~~~~~~~i~~al~~lH~~~i~H~dikp~ni 130 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQ--------------------------LLLLQRMACEIAAGVTHMHKHNFLHSDLALRNC 130 (268)
T ss_pred CCCCcHHHHHHhhhccccccc--------------------------HHHHHHHHHHHHHHHHHHHHCCeeccCCccceE
Confidence 999999999876422111111 111236789999999999999999999999999
Q ss_pred EEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 010140 251 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 330 (517)
Q Consensus 251 Ll~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (517)
|++.++.+||+|||++.......
T Consensus 131 l~~~~~~~~l~Dfg~~~~~~~~~--------------------------------------------------------- 153 (268)
T cd05086 131 FLTSDLTVKVGDYGIGPSRYKED--------------------------------------------------------- 153 (268)
T ss_pred EEcCCccEEecccccccccCcch---------------------------------------------------------
Confidence 99999999999999873211000
Q ss_pred CCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-------CCCCccchHHHHHHHHHHHhh-CCCCCCCCCh
Q 010140 331 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-------QGHGSAVDWWTLGVFLYEMLY-GTTPFKGENN 402 (517)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-------~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~ 402 (517)
.........|+..|+|||++.. ..++.++|||||||++|||++ |..||...+.
T Consensus 154 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 214 (268)
T cd05086 154 -------------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD 214 (268)
T ss_pred -------------------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0001123468889999999853 235779999999999999997 5789988777
Q ss_pred HHHHHHHhcCCC-CCC--CCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 403 EKTLINILKKPL-TFP--RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 403 ~~~~~~i~~~~~-~~p--~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.+.+..+..... ..+ ...... ...+.++|..|| .+|++||++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~c~-~~P~~Rp~~~ 260 (268)
T cd05086 215 REVLNHVIKDQQVKLFKPQLELPY------SERWYEVLQFCW-LSPEKRATAE 260 (268)
T ss_pred HHHHHHHHhhcccccCCCccCCCC------cHHHHHHHHHHh-hCcccCCCHH
Confidence 776666554322 211 111111 124789999999 6899999997
No 366
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.3e-38 Score=315.86 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=191.2
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++|+..+.||+|+||.||+|.+...... ....+|+|.+...... .....+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~ 80 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGET-VKIPVAIKILNETTGP--KANVEFMDEALIMASMDHPHLVRLLGVCLS 80 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCc-ceeeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcccEEEEEcC
Confidence 3457899999999999999999998763222 2346899988654221 223356679999999999999999998865
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
. ..++|+||+++|+|.+++.... ..++... +..++.||+.||+|||++||
T Consensus 81 ~-~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~----------------------------~~~~~~qi~~~L~~LH~~~i 130 (303)
T cd05110 81 P-TIQLVTQLMPHGCLLDYVHEHK-DNIGSQL----------------------------LLNWCVQIAKGMMYLEERRL 130 (303)
T ss_pred C-CceeeehhcCCCCHHHHHHhcc-cCCCHHH----------------------------HHHHHHHHHHHHHHHhhcCe
Confidence 4 4679999999999999886542 1122211 13678999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+||||||+|||++.++.+||+|||+++.+.....
T Consensus 131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------- 164 (303)
T cd05110 131 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK---------------------------------------------- 164 (303)
T ss_pred eccccccceeeecCCCceEEccccccccccCccc----------------------------------------------
Confidence 9999999999999999999999999854321000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 165 ------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 165 ------------------------------EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred ------------------------------ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 000112245778999999998889999999999999999997 9999987
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.........+... ...+.... ...++.++|.+||..||++||++.
T Consensus 215 ~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~li~~c~~~~p~~Rp~~~ 259 (303)
T cd05110 215 IPTREIPDLLEKG-ERLPQPPI-------CTIDVYMVMVKCWMIDADSRPKFK 259 (303)
T ss_pred CCHHHHHHHHHCC-CCCCCCCC-------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 7655444333332 22222111 112589999999999999999997
No 367
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-38 Score=311.22 Aligned_cols=243 Identities=23% Similarity=0.281 Sum_probs=182.1
Q ss_pred eeeccceeEEEEEEEecCC-------------------CCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCc
Q 010140 91 RLGSGDIGNVYLCQIRNPM-------------------VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~-------------------~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI 151 (517)
+||+|+||.||+|...... .......||+|++..... .....+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCCe
Confidence 6999999999999864211 011234689999876532 233456668899999999999
Q ss_pred cceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHH
Q 010140 152 PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLA 231 (517)
Q Consensus 152 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 231 (517)
+++++++..+...|+||||+++|+|..++.... ..++.... ..++.||+.|
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~----------------------------~~i~~qi~~~ 129 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWK----------------------------ITVAQQLASA 129 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHH----------------------------HHHHHHHHHH
Confidence 999999999999999999999999988876532 22332222 2678999999
Q ss_pred HHHHHhcCceeccCCCCceEEccCC-------cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcc
Q 010140 232 LEYLHMMGIVYRDLKPENVLVREDG-------HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVL 304 (517)
Q Consensus 232 L~yLH~~~iiHrDLKp~NILl~~~~-------~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (517)
|+|||++||+||||||+|||++..+ .+|++|||++.....
T Consensus 130 l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~--------------------------------- 176 (274)
T cd05076 130 LSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS--------------------------------- 176 (274)
T ss_pred HHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc---------------------------------
Confidence 9999999999999999999997644 489999998632110
Q ss_pred ccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHH
Q 010140 305 SCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTL 383 (517)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSl 383 (517)
.....++..|+|||.+.+ ..++.++|||||
T Consensus 177 -------------------------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~sl 207 (274)
T cd05076 177 -------------------------------------------------REERVERIPWIAPECVPGGNSLSTAADKWSF 207 (274)
T ss_pred -------------------------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHHH
Confidence 011246788999999876 458999999999
Q ss_pred HHHHHHHh-hCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcC
Q 010140 384 GVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461 (517)
Q Consensus 384 Gvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~h 461 (517)
||++|||+ +|..||.+....+... ........+... ..++.+||.+||+.+|++||++. +++++
T Consensus 208 G~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~li~~cl~~~p~~Rps~~----~il~~ 272 (274)
T cd05076 208 GTTLLEICFDGEVPLKERTPSEKER-FYEKKHRLPEPS---------CKELATLISQCLTYEPTQRPSFR----TILRD 272 (274)
T ss_pred HHHHHHHHhCCCCCccccChHHHHH-HHHhccCCCCCC---------ChHHHHHHHHHcccChhhCcCHH----HHHHh
Confidence 99999995 7999998776544332 222222222211 12489999999999999999997 77764
No 368
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.2e-38 Score=309.76 Aligned_cols=258 Identities=24% Similarity=0.326 Sum_probs=187.2
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--C
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--S 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~ 161 (517)
.+|++++.||+|+||.||+|...... ...++.||+|.+.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQ-DNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCc-CCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 57999999999999999999864211 1256789999986543 2334567779999999999999999997643 4
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
..+|+||||+++|+|.+++.... ..+.... ...++.||+.||+|||++||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~----------------------------~~~~~~~l~~aL~~LH~~~i~ 130 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRK----------------------------LLLYASQICKGMEYLGSKRYV 130 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHH----------------------------HHHHHHHHHHHHHHHHHCCce
Confidence 56899999999999999886532 1122222 236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+|||++.++.+||+|||++..........
T Consensus 131 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~--------------------------------------------- 165 (284)
T cd05081 131 HRDLATRNILVESENRVKIGDFGLTKVLPQDKEYY--------------------------------------------- 165 (284)
T ss_pred eccCCHhhEEECCCCeEEECCCcccccccCCCcce---------------------------------------------
Confidence 99999999999999999999999985432110000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
.......++..|+|||++.+..++.++|||||||++|||++|..|+....
T Consensus 166 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~ 215 (284)
T cd05081 166 ------------------------------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP 215 (284)
T ss_pred ------------------------------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc
Confidence 00001124456999999998889999999999999999999877764332
Q ss_pred hHH---------------HHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 402 NEK---------------TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 402 ~~~---------------~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
... .+..++......+... ....++.+||.+||..+|++|||+. |+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~cl~~~p~~Rpt~~----ei~~ 278 (284)
T cd05081 216 AEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPP-------GCPAEIYAIMKECWNNDPSQRPSFS----ELAL 278 (284)
T ss_pred hhhhhhcccccccccchHHHHHHHhcCCcCCCCC-------CCCHHHHHHHHHHccCChhhCCCHH----HHHH
Confidence 110 0111222221111111 1123589999999999999999997 6554
No 369
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.1e-39 Score=307.10 Aligned_cols=233 Identities=28% Similarity=0.414 Sum_probs=179.8
Q ss_pred cceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEecCCC
Q 010140 95 GDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGG 174 (517)
Q Consensus 95 G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 174 (517)
|.||.||+|+++. +++.||+|.+...... ..|...+....||||+++++++.+.+..|+||||++||
T Consensus 4 g~~~~v~~~~~~~-----~~~~~~~K~i~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTR-----TQQTFILKGLRKSSEY--------SRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG 70 (237)
T ss_pred cccceEEEEEEcc-----CCcEEEEEeecchhhh--------hhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence 9999999999987 6788999999765321 12444555567999999999999999999999999999
Q ss_pred chhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEcc
Q 010140 175 DLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVRE 254 (517)
Q Consensus 175 ~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~ 254 (517)
+|.+++.... .++... +..++.||+.||+|||++||+||||||+||+++.
T Consensus 71 ~L~~~l~~~~--~l~~~~----------------------------~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~ 120 (237)
T cd05576 71 KLWSHISKFL--NIPEEC----------------------------VKRWAAEMVVALDALHREGIVCRDLNPNNILLDD 120 (237)
T ss_pred CHHHHHHHhc--CCCHHH----------------------------HHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 9999886542 222222 2367899999999999999999999999999999
Q ss_pred CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCC
Q 010140 255 DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDH 334 (517)
Q Consensus 255 ~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (517)
++.++|+|||++.....
T Consensus 121 ~~~~~l~df~~~~~~~~--------------------------------------------------------------- 137 (237)
T cd05576 121 RGHIQLTYFSRWSEVED--------------------------------------------------------------- 137 (237)
T ss_pred CCCEEEecccchhcccc---------------------------------------------------------------
Confidence 99999999998632210
Q ss_pred CCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCC
Q 010140 335 HDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414 (517)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~ 414 (517)
......++..|+|||.+.+..++.++||||+||++|||++|..||........ .....
T Consensus 138 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----~~~~~ 195 (237)
T cd05576 138 ------------------SCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----THTTL 195 (237)
T ss_pred ------------------ccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----ccccc
Confidence 01122456789999999888899999999999999999999998764321100 00011
Q ss_pred CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCc
Q 010140 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFF 464 (517)
Q Consensus 415 ~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f 464 (517)
..|. .....+++||.+||+.||++|+++. ..++++++||||
T Consensus 196 ~~~~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 196 NIPE---------WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCcc---------cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 1111 1123589999999999999999974 235799999998
No 370
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.2e-38 Score=304.96 Aligned_cols=246 Identities=24% Similarity=0.323 Sum_probs=189.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E 169 (517)
++||+|+||.||+|.+.. ++.||+|.+...... .....+..|+.++++++||||+++++++.+....|+|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~------~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG------NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeC------CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEE
Confidence 469999999999998763 578999998754332 334567779999999999999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
|++|++|.+++..... .+... .+..++.|++.||+|||++|++||||||+|
T Consensus 73 ~~~~~~l~~~l~~~~~-~~~~~----------------------------~~~~~~~~~~~~l~~lH~~~i~h~di~p~n 123 (251)
T cd05041 73 LVPGGSLLTFLRKKKN-RLTVK----------------------------KLLQMSLDAAAGMEYLESKNCIHRDLAARN 123 (251)
T ss_pred cCCCCcHHHHHHhcCC-CCCHH----------------------------HHHHHHHHHHHHHHHHHhCCEehhhcCcce
Confidence 9999999998865321 12211 123678899999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
||++.++.+||+|||+++.......
T Consensus 124 ili~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------- 148 (251)
T cd05041 124 CLVGENNVLKISDFGMSREEEGGIY------------------------------------------------------- 148 (251)
T ss_pred EEEcCCCcEEEeeccccccccCCcc-------------------------------------------------------
Confidence 9999999999999999843210000
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 408 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~ 408 (517)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...........
T Consensus 149 ---------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~ 207 (251)
T cd05041 149 ---------------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER 207 (251)
T ss_pred ---------------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHH
Confidence 000001123567999999998889999999999999999998 8999988776665555
Q ss_pred HhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 409 i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+.... ..+... ..+.++.+||.+||..+|.+||++. |+++
T Consensus 208 ~~~~~-~~~~~~-------~~~~~~~~li~~~l~~~p~~Rp~~~----ell~ 247 (251)
T cd05041 208 IESGY-RMPAPQ-------LCPEEIYRLMLQCWAYDPENRPSFS----EIYN 247 (251)
T ss_pred HhcCC-CCCCCc-------cCCHHHHHHHHHHhccChhhCcCHH----HHHH
Confidence 54432 111110 1123589999999999999999997 7664
No 371
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-39 Score=317.01 Aligned_cols=255 Identities=21% Similarity=0.244 Sum_probs=202.7
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 159 (517)
++..+...+.++||+|.||.|.+|.... ...||+|.++.+... +....|.+|+++|.+|+|||||+|+++|.
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg------~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~ 605 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG------PLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCV 605 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecC------ceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence 3556778999999999999999998764 478999999877543 44577888999999999999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.++.+|+||||++.|||.+++..+.... ..... ...|+.||+.|++||.+.+
T Consensus 606 ~DePicmI~EYmEnGDLnqFl~aheapt--~~t~~--------------------------~vsi~tqiasgmaYLes~n 657 (807)
T KOG1094|consen 606 QDDPLCMITEYMENGDLNQFLSAHELPT--AETAP--------------------------GVSICTQIASGMAYLESLN 657 (807)
T ss_pred cCCchHHHHHHHhcCcHHHHHHhccCcc--cccch--------------------------hHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999998863222 11111 1258999999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
+|||||.+.|||++.++++||+|||+++.+...+.
T Consensus 658 fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y--------------------------------------------- 692 (807)
T KOG1094|consen 658 FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY--------------------------------------------- 692 (807)
T ss_pred hhhccccccceeecCcccEEecCcccccccccCCc---------------------------------------------
Confidence 99999999999999999999999999864332111
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHh--hCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEML--YGTTPF 397 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ell--tG~~Pf 397 (517)
.......+-...|||+|.+....+++++|+|+||+++||++ +.+.||
T Consensus 693 -------------------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py 741 (807)
T KOG1094|consen 693 -------------------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPY 741 (807)
T ss_pred -------------------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCch
Confidence 11122345677999999999999999999999999999987 589999
Q ss_pred CCCChHHHHHHHhcC---CC--CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 398 KGENNEKTLINILKK---PL--TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~---~~--~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
...++++.......- +. ..+.... -++..+.+||.+||..|-.+||+++
T Consensus 742 ~~lt~e~vven~~~~~~~~~~~~~l~~P~------~cp~~lyelml~Cw~~es~~RPsFe 795 (807)
T KOG1094|consen 742 SQLTDEQVVENAGEFFRDQGRQVVLSRPP------ACPQGLYELMLRCWRRESEQRPSFE 795 (807)
T ss_pred hhhhHHHHHHhhhhhcCCCCcceeccCCC------cCcHHHHHHHHHHhchhhhcCCCHH
Confidence 988887766655321 11 1111111 1222488999999999999999997
No 372
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=328.44 Aligned_cols=249 Identities=34% Similarity=0.513 Sum_probs=189.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc--
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-- 162 (517)
-+...+.||+|+||.||+++++. +++.||||.+++... ....++..+|+++|++|+|||||+++++=+...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnke-----tG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKE-----TGRLVAVKTFNKESS--LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLG 86 (732)
T ss_pred ceeehhhhcCCccceeeeecccc-----cccchhHHhhhhhcc--cchHHHHHHHHHHHHHcCchhhhhhcccCCccccC
Confidence 36677889999999999999887 889999999987542 244566677999999999999999999776543
Q ss_pred ----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 163 ----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 163 ----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
...+|||||.||||+..+++.. +..++++-.+ +.++..++.||.|||++
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PE-N~~GLpE~e~--------------------------l~lL~d~~~al~~LrEn 139 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPE-NAYGLPESEF--------------------------LDLLSDLVSALRHLREN 139 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcc-cccCCCHHHH--------------------------HHHHHHHHHHHHHHHHc
Confidence 4689999999999999987642 2333333322 25678999999999999
Q ss_pred CceeccCCCCceEEc--cCC--cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 239 GIVYRDLKPENVLVR--EDG--HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 239 ~iiHrDLKp~NILl~--~~~--~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
|||||||||.||++- .+| .-||+|||.|+.+++
T Consensus 140 ~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d------------------------------------------- 176 (732)
T KOG4250|consen 140 GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD------------------------------------------- 176 (732)
T ss_pred CceeccCCCCcEEEeecCCCceEEeeecccccccCCC-------------------------------------------
Confidence 999999999999984 334 479999999965543
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC-CCCCccchHHHHHHHHHHHhhC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~-~~~~~~~DiWSlGvil~elltG 393 (517)
+....+++||+.|.+||++.. ..|+..+|.|||||++|+++||
T Consensus 177 ------------------------------------~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG 220 (732)
T KOG4250|consen 177 ------------------------------------NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATG 220 (732)
T ss_pred ------------------------------------CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhcc
Confidence 223467899999999999995 7799999999999999999999
Q ss_pred CCCCCCC----ChHHHHHHHhcCCC-------------------CCCCCCCCCchhHHhhhhHHHHHHHhccCCccccc
Q 010140 394 TTPFKGE----NNEKTLINILKKPL-------------------TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449 (517)
Q Consensus 394 ~~Pf~~~----~~~~~~~~i~~~~~-------------------~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~ 449 (517)
..||... +..+.+..+...+. .+|...... . .....+-..+..+|..||++|.
T Consensus 221 ~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls-~--~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 221 ELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLS-R--GLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCccccc-H--HHHhhhhHHHHHHHhhhHHHhC
Confidence 9999643 23345555543221 111111111 1 1122466889999999999999
No 373
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.6e-38 Score=305.72 Aligned_cols=241 Identities=23% Similarity=0.253 Sum_probs=182.8
Q ss_pred eeeeccceeEEEEEEEecCCC-----CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 90 RRLGSGDIGNVYLCQIRNPMV-----GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~-----~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+.||+|+||.||+|.+..... ......+++|++...... ...+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 469999999999999986320 112245788887654321 4566679999999999999999999887 778
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|+||||+++|+|.+++..... .++.... ..++.||+.||+|||++||+|||
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~----------------------------~~~~~~i~~~l~~LH~~~i~H~d 126 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWK----------------------------LDVAKQLASALHYLEDKKLVHGN 126 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHH----------------------------HHHHHHHHHHHHHHhhCCeeccc
Confidence 999999999999999876532 2222221 36789999999999999999999
Q ss_pred CCCCceEEccCC-------cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 245 LKPENVLVREDG-------HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 245 LKp~NILl~~~~-------~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
|||+|||++.++ .+||+|||++.....
T Consensus 127 lkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---------------------------------------------- 160 (259)
T cd05037 127 VCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---------------------------------------------- 160 (259)
T ss_pred CccceEEEecCccccCCceeEEeCCCCccccccc----------------------------------------------
Confidence 999999999887 799999999843210
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhh-CC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLY-GT 394 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~ellt-G~ 394 (517)
.....++..|+|||++.+. .++.++|||||||++|+|++ |.
T Consensus 161 ------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~ 204 (259)
T cd05037 161 ------------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGE 204 (259)
T ss_pred ------------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCC
Confidence 0112466789999999877 68999999999999999999 68
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 395 TPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
.||...+..+...... .....+.... ..+.+||.+||..+|.+||++. ++++
T Consensus 205 ~p~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~li~~~l~~~p~~Rpt~~----~il~ 256 (259)
T cd05037 205 EPLSTLSSSEKERFYQ-DQHRLPMPDC---------AELANLINQCWTYDPTKRPSFR----AILR 256 (259)
T ss_pred CCcccCCchhHHHHHh-cCCCCCCCCc---------hHHHHHHHHHhccChhhCCCHH----HHHH
Confidence 8887765443333222 2211121111 2589999999999999999997 6654
No 374
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.6e-38 Score=309.82 Aligned_cols=262 Identities=16% Similarity=0.159 Sum_probs=180.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH--HHH------HHhHHHHHHHHHHhcCCCCcc
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--IRK------KLHRADMEKVILTMLDHPFLP 152 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~--~~~------~~~~~~~E~~il~~l~HpnIv 152 (517)
+..++|++.+.||+|+||.||+|++..... ....+|+|+....... ... .......+...+..++|+||+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~--~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHC--INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcc--cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 445789999999999999999999876311 2456777764322110 000 011122234455667899999
Q ss_pred ceeeeeecCc----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHH
Q 010140 153 TLYAEFEASH----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAET 228 (517)
Q Consensus 153 ~l~~~~~~~~----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi 228 (517)
++++++.... ..+++||++ ..++.+.+.... ..+.. .++.++.||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~----------------------------~~~~i~~qi 135 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIK--CKNKK----------------------------LIKNIMKDM 135 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhhc--cCCHH----------------------------HHHHHHHHH
Confidence 9998765433 457889988 446666554421 11111 123678999
Q ss_pred HHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccc
Q 010140 229 LLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFS 308 (517)
Q Consensus 229 ~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (517)
+.||+|||+++|+||||||+|||++.++.++|+|||+|+.+.......
T Consensus 136 ~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~-------------------------------- 183 (294)
T PHA02882 136 LTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHI-------------------------------- 183 (294)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCccc--------------------------------
Confidence 999999999999999999999999999999999999985543111000
Q ss_pred ccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHH
Q 010140 309 SVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLY 388 (517)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ 388 (517)
...........||+.|+|||++.+..++.++|||||||++|
T Consensus 184 ---------------------------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~ 224 (294)
T PHA02882 184 ---------------------------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCML 224 (294)
T ss_pred ---------------------------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00001122346999999999999999999999999999999
Q ss_pred HHhhCCCCCCCCCh-HHH--------HHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhh
Q 010140 389 EMLYGTTPFKGENN-EKT--------LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK 459 (517)
Q Consensus 389 elltG~~Pf~~~~~-~~~--------~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell 459 (517)
||++|.+||.+... ... ...+.......+. ....+.+++..||..+|++||+.. +++
T Consensus 225 el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~rp~~~----~l~ 290 (294)
T PHA02882 225 KWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKN----------ANKFIYDFIECVTKLSYEEKPDYD----ALI 290 (294)
T ss_pred HHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCC----------CCHHHHHHHHHHHhCCCCCCCCHH----HHH
Confidence 99999999987743 221 1222222222211 112489999999999999999996 665
Q ss_pred c
Q 010140 460 R 460 (517)
Q Consensus 460 ~ 460 (517)
+
T Consensus 291 ~ 291 (294)
T PHA02882 291 K 291 (294)
T ss_pred H
Confidence 3
No 375
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.7e-38 Score=308.30 Aligned_cols=260 Identities=20% Similarity=0.246 Sum_probs=192.8
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc---
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH--- 162 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--- 162 (517)
|.+.+.||+|+||.||+|..+... .+++.||||++..+... .....++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSED--GSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG 77 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccC--CCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC
Confidence 677889999999999999876421 15688999998754322 223456777999999999999999999885432
Q ss_pred ---eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 163 ---YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
..++++||+++|+|..++.......-.. ......++.++.||+.||+|||++|
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------------~l~~~~~~~~~~~i~~~l~~lH~~~ 133 (273)
T cd05074 78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPF------------------------TLPLQTLVRFMIDIASGMEYLSSKN 133 (273)
T ss_pred cccceEEEEecCCCCcHHHHHHHhcccCCCC------------------------CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2478999999999988775422110000 0111223478899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|+||||||+||+++.++.+||+|||+++.......
T Consensus 134 i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 168 (273)
T cd05074 134 FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY--------------------------------------------- 168 (273)
T ss_pred EeecccchhhEEEcCCCCEEECcccccccccCCcc---------------------------------------------
Confidence 99999999999999999999999999843221000
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~ 398 (517)
........+++.|++||.+.+..++.++|||||||++|+|++ |.+||.
T Consensus 169 -------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~ 217 (273)
T cd05074 169 -------------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYA 217 (273)
T ss_pred -------------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCC
Confidence 000112235678999999998889999999999999999999 899998
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+.+..+....+......... .. ....+.+++.+||+.+|++||++. ++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~l~~~~l~~~p~~Rps~~----~~~~ 267 (273)
T cd05074 218 GVENSEIYNYLIKGNRLKQP--PD------CLEDVYELMCQCWSPEPKCRPSFQ----HLRD 267 (273)
T ss_pred CCCHHHHHHHHHcCCcCCCC--CC------CCHHHHHHHHHHcCCChhhCcCHH----HHHH
Confidence 88777666666554321111 11 123589999999999999999997 6554
No 376
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=320.17 Aligned_cols=281 Identities=25% Similarity=0.339 Sum_probs=214.0
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..+...+.+.||.|.||.||+|......++ ..--||||..+.+... ...+.|..|..+|+.++|||||+|+|++.+
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kg-e~iaVAvKtCK~d~t~--d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKG-ERIAVAVKTCKTDCTP--DDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccC-cceeeeeehhccCCCh--hhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 3344556778999999999999998876443 4456999998875432 336778889999999999999999999875
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
...|||||+++-|.|..+++.... .++. . .+..|+.||+.||+|||+.++
T Consensus 463 -~P~WivmEL~~~GELr~yLq~nk~-sL~l--~--------------------------tL~ly~~Qi~talaYLeSkrf 512 (974)
T KOG4257|consen 463 -QPMWIVMELAPLGELREYLQQNKD-SLPL--R--------------------------TLTLYCYQICTALAYLESKRF 512 (974)
T ss_pred -cceeEEEecccchhHHHHHHhccc-cchH--H--------------------------HHHHHHHHHHHHHHHHHhhch
Confidence 578999999999999999987532 2221 1 112688999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
|||||..+|||+.....|||+|||+++.+....-+
T Consensus 513 VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY--------------------------------------------- 547 (974)
T KOG4257|consen 513 VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY--------------------------------------------- 547 (974)
T ss_pred hhhhhhhhheeecCcceeeecccchhhhccccchh---------------------------------------------
Confidence 99999999999999999999999999765532211
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
..+...-...|||||.+....++.++|||.|||++||++. |..||.+
T Consensus 548 --------------------------------kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg 595 (974)
T KOG4257|consen 548 --------------------------------KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG 595 (974)
T ss_pred --------------------------------hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence 1111223557999999999999999999999999999885 9999999
Q ss_pred CChHHHHHHHhcCCC-CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCC---hHHhh------------cCCC
Q 010140 400 ENNEKTLINILKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG---SVEIK------------RHEF 463 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~---~~ell------------~hp~ 463 (517)
-.+.+.+..+-++.. +.|+.. ++.+..|+.+||+++|.+||.+.+. +.+++ +.-+
T Consensus 596 vkNsDVI~~iEnGeRlP~P~nC---------Pp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~~~~Eq~r~~R~ 666 (974)
T KOG4257|consen 596 VKNSDVIGHIENGERLPCPPNC---------PPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKINSSEQLRRQRK 666 (974)
T ss_pred ccccceEEEecCCCCCCCCCCC---------ChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhhhhHHHHHhhhc
Confidence 988888777766543 333322 2248999999999999999998531 12222 2334
Q ss_pred cCCCCcccccCCCCCCC
Q 010140 464 FKGINWALIRSIKPPEV 480 (517)
Q Consensus 464 f~~~~~~~~~~~~p~~~ 480 (517)
-....|..-..+.+|..
T Consensus 667 ~a~~~~~~~~~~e~PPK 683 (974)
T KOG4257|consen 667 VASMIWQNSDDIEIPPK 683 (974)
T ss_pred ccceeeccCCccCCCCC
Confidence 44556766555555543
No 377
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3e-38 Score=307.37 Aligned_cols=252 Identities=26% Similarity=0.372 Sum_probs=194.0
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH-------HHHHHHhHHHHHHHHHHh-cCCCCccceee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL-------AIRKKLHRADMEKVILTM-LDHPFLPTLYA 156 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~-------~~~~~~~~~~~E~~il~~-l~HpnIv~l~~ 156 (517)
+|++.+.||+|+||.||+|.+... .++.+|+|.+..... .......++..|+.++.+ ++||||+++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNN----GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCC----CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 488899999999999999998752 457899998754321 112334556678887765 79999999999
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
++..++..|+||||++|++|.+++............. .+..++.|++.||.|||
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~--------------------------~~~~~~~~l~~~l~~lh 130 (269)
T cd08528 77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEE--------------------------RIWNIFVQMVLALRYLH 130 (269)
T ss_pred eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHH--------------------------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998875432111111111 22367899999999999
Q ss_pred h-cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccc
Q 010140 237 M-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 315 (517)
Q Consensus 237 ~-~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (517)
+ .||+||||||+||+++.++.++|+|||++.......
T Consensus 131 ~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------ 168 (269)
T cd08528 131 KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES------------------------------------------ 168 (269)
T ss_pred cCCceeecCCCHHHEEECCCCcEEEecccceeeccccc------------------------------------------
Confidence 6 789999999999999999999999999984322100
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCC
Q 010140 316 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 395 (517)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~ 395 (517)
......|+..|+|||.+.+..++.++|||||||++|+|++|.+
T Consensus 169 -------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~ 211 (269)
T cd08528 169 -------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQP 211 (269)
T ss_pred -------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCC
Confidence 1123458889999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 396 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 396 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
||...........+......... ... ....+.+||.+||+.||++||++.
T Consensus 212 p~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~l~~li~~cl~~~p~~Rp~~~ 261 (269)
T cd08528 212 PFYSTNMLSLATKIVEAVYEPLP-EGM------YSEDVTDVITSCLTPDAEARPDII 261 (269)
T ss_pred cccccCHHHHHHHHhhccCCcCC-ccc------CCHHHHHHHHHHCCCCCccCCCHH
Confidence 99887766666666554332111 111 123589999999999999999987
No 378
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.8e-38 Score=308.16 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=191.9
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec--C
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--S 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~ 161 (517)
++|++.+.||+|+||.||+|+...... .+++.||+|++...... .....+..|+.+++.++||||+++++++.. +
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~-~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGD-NTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCC-CCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 578899999999999999998764221 25688999999765432 345677789999999999999999999877 6
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
...|+||||+++++|.+++..... .+... .+..++.||+.||+|||++||+
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~----------------------------~~~~~~~~l~~aL~~lH~~~i~ 131 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-QINLK----------------------------RLLLFSSQICKGMDYLGSQRYI 131 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-ccCHH----------------------------HHHHHHHHHHHHHHHHHhCCee
Confidence 689999999999999999876431 12222 1236789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++.++|+|||++.........
T Consensus 132 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 165 (284)
T cd05038 132 HRDLAARNILVESEDLVKISDFGLAKVLPEDKDY---------------------------------------------- 165 (284)
T ss_pred cCCCCHHhEEEcCCCCEEEcccccccccccCCcc----------------------------------------------
Confidence 9999999999999999999999998543210000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
........++..|+|||.+.+..++.++|||||||++|||++|..||....
T Consensus 166 -----------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 166 -----------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred -----------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 000011234567999999988889999999999999999999999987543
Q ss_pred hH--------------HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 NE--------------KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~~--------------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.. ..+...+......+... ....++.+|+.+||+.||++||++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~cl~~~p~~Rpt~~ 274 (284)
T cd05038 217 AEFLRMIGIAQGQMIVTRLLELLKEGERLPRPP-------SCPDEVYDLMKLCWEAEPQDRPSFA 274 (284)
T ss_pred chhccccccccccccHHHHHHHHHcCCcCCCCc-------cCCHHHHHHHHHHhccChhhCCCHH
Confidence 21 11222222222222111 1123589999999999999999997
No 379
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.5e-38 Score=333.80 Aligned_cols=291 Identities=19% Similarity=0.191 Sum_probs=182.9
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
...+..++|.+.+.||+|+||.||+|++..... ..+..||+|.+....... ....| .+....+.+++.++..
T Consensus 126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~~e-----~~~~e--~l~~~~~~~~~~~~~~ 197 (566)
T PLN03225 126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGAVE-----IWMNE--RVRRACPNSCADFVYG 197 (566)
T ss_pred CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccchhH-----HHHHH--HHHhhchhhHHHHHHh
Confidence 455678999999999999999999999886211 127889999876432110 00001 1122223333333222
Q ss_pred ------eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCcccc-ccchhhhhhhHHHHHHHH
Q 010140 158 ------FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVH-TDVTLFFNYRFYAAETLL 230 (517)
Q Consensus 158 ------~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~qi~~ 230 (517)
...+...+|||||+.+++|.+++..... ....... ......... ........++.++.||+.
T Consensus 198 ~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~-~~~v~~~----------l~~~~~~l~~~~~r~~~~i~~i~~qll~ 266 (566)
T PLN03225 198 FLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEF-PYNVEPY----------LLGKVQDLPKGLERENKIIQTIMRQILF 266 (566)
T ss_pred hhcccccccCCceEEEEEecCCCcHHHHHHhcCC-chhHHHH----------hccchhhccccchhhHHHHHHHHHHHHH
Confidence 2456679999999999999999875421 0000000 000000000 011112235678999999
Q ss_pred HHHHHHhcCceeccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccc
Q 010140 231 ALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSS 309 (517)
Q Consensus 231 aL~yLH~~~iiHrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (517)
||+|||++||+||||||+|||++. ++.+||+|||+|+.+...
T Consensus 267 aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~------------------------------------- 309 (566)
T PLN03225 267 ALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVG------------------------------------- 309 (566)
T ss_pred HHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccc-------------------------------------
Confidence 999999999999999999999985 589999999998432210
Q ss_pred cccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC----------------
Q 010140 310 VSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG---------------- 373 (517)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~---------------- 373 (517)
.......++||+.|||||.+....
T Consensus 310 ----------------------------------------~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp 349 (566)
T PLN03225 310 ----------------------------------------INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSP 349 (566)
T ss_pred ----------------------------------------cccCCcccccCCCccChHHhhccCCCCCCccccccccccc
Confidence 001123457899999999764322
Q ss_pred ------CCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcC-CCCC-------CCCCCCC-chhHH----hhhhHH
Q 010140 374 ------HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK-PLTF-------PRIGVSS-SKEFE----EVVKLQ 434 (517)
Q Consensus 374 ------~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-~~~~-------p~~~~~~-~~~~~----~~~~l~ 434 (517)
++.++|||||||+||||+++..++.. ....+..++.. .... +...... ...++ ......
T Consensus 350 ~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 427 (566)
T PLN03225 350 VLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGW 427 (566)
T ss_pred hhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHH
Confidence 34467999999999999997766542 22222222211 1000 0000000 00000 011356
Q ss_pred HHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcc
Q 010140 435 DLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470 (517)
Q Consensus 435 dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~ 470 (517)
+||.+||++||++|||+. |+|+||||++.++.
T Consensus 428 dLi~~mL~~dP~kR~ta~----e~L~Hpff~~~~~~ 459 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAK----AALAHPYFDREGLL 459 (566)
T ss_pred HHHHHHccCCcccCCCHH----HHhCCcCcCCCCcc
Confidence 899999999999999998 99999999998875
No 380
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=315.88 Aligned_cols=253 Identities=20% Similarity=0.241 Sum_probs=204.1
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
.|+....+..+..+||-|.||.||.|.++. -...||||.++.+. ..++.|..|..+|+.++|||+|+|+++
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKk-----yslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGV 331 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGV 331 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeec-----cceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhh
Confidence 344445667888999999999999999997 55679999998775 446778889999999999999999999
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
|..+..+|||+|||..|+|.+||+.......+ +.. +..++.||..|++||..
T Consensus 332 CT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~---avv-------------------------LlyMAtQIsSaMeYLEk 383 (1157)
T KOG4278|consen 332 CTHEPPFYIITEFMCYGNLLDYLRECNRSEVP---AVV-------------------------LLYMATQISSAMEYLEK 383 (1157)
T ss_pred hccCCCeEEEEecccCccHHHHHHHhchhhcc---hhH-------------------------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999886432211 111 13789999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+++|||||..+|+|+.++..||++|||+++.+.....
T Consensus 384 knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY------------------------------------------- 420 (1157)
T KOG4278|consen 384 KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY------------------------------------------- 420 (1157)
T ss_pred hhhhhhhhhhhhccccccceEEeeccchhhhhcCCce-------------------------------------------
Confidence 9999999999999999999999999999965431100
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~P 396 (517)
.-.....-...|.|||.+..+.++.++|||+|||+|||+.| |-.|
T Consensus 421 ----------------------------------TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsP 466 (1157)
T KOG4278|consen 421 ----------------------------------TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 466 (1157)
T ss_pred ----------------------------------ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCC
Confidence 00011123457999999999999999999999999999996 9999
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
|.+.+...++..+-++-..-...++ ++.+.+||+.||+++|.+||+++
T Consensus 467 YPGidlSqVY~LLEkgyRM~~PeGC--------PpkVYeLMraCW~WsPsDRPsFa 514 (1157)
T KOG4278|consen 467 YPGIDLSQVYGLLEKGYRMDGPEGC--------PPKVYELMRACWNWSPSDRPSFA 514 (1157)
T ss_pred CCCccHHHHHHHHhccccccCCCCC--------CHHHHHHHHHHhcCCcccCccHH
Confidence 9999887777665554322222222 23589999999999999999986
No 381
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=324.62 Aligned_cols=256 Identities=23% Similarity=0.296 Sum_probs=206.5
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++.++.++||+|.||.|++|.+..... +.-.||||+++.+.... ....|.+|+.+|.+|+|||+|+|||+..+
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psg--k~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSG--KHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD 182 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCC--cEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence 344667788999999999999999987533 44679999998775542 56788899999999999999999999887
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
..+.||||+++.|+|.+.|.+.....+ +...+..|+.||+.|+.||.++++
T Consensus 183 -qp~mMV~ELaplGSLldrLrka~~~~l----------------------------lv~~Lcdya~QiA~aM~YLeskrl 233 (1039)
T KOG0199|consen 183 -QPAMMVFELAPLGSLLDRLRKAKKAIL----------------------------LVSRLCDYAMQIAKAMQYLESKRL 233 (1039)
T ss_pred -chhhHHhhhcccchHHHHHhhccccce----------------------------eHHHHHHHHHHHHHHHHHHhhhhh
Confidence 788999999999999999877322222 222335899999999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
|||||..+|+|+-....|||+||||.+.+.....+.
T Consensus 234 vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y-------------------------------------------- 269 (1039)
T KOG0199|consen 234 VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY-------------------------------------------- 269 (1039)
T ss_pred hhhhhhhhhheecccceeeeecccceeccCCCCcce--------------------------------------------
Confidence 999999999999999999999999997665433221
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKG 399 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~ 399 (517)
.......-...|.|||.+....++.++|||++||+||||++ |+.||.|
T Consensus 270 -------------------------------vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G 318 (1039)
T KOG0199|consen 270 -------------------------------VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG 318 (1039)
T ss_pred -------------------------------EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC
Confidence 00111123457999999999999999999999999999997 8999999
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 400 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.....++.+|-.+.. .+... .++.++.+++..||..+|++|||+.
T Consensus 319 ~~g~qIL~~iD~~er-LpRPk-------~csedIY~imk~cWah~paDRptFs 363 (1039)
T KOG0199|consen 319 CRGIQILKNIDAGER-LPRPK-------YCSEDIYQIMKNCWAHNPADRPTFS 363 (1039)
T ss_pred CCHHHHHHhcccccc-CCCCC-------CChHHHHHHHHHhccCCccccccHH
Confidence 999999888864332 22211 1223599999999999999999996
No 382
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=4e-39 Score=285.34 Aligned_cols=260 Identities=24% Similarity=0.391 Sum_probs=198.9
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeec
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEA 160 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~ 160 (517)
..++|++.+++|+|.|++||.|.... ++..++||+++.-. .+.+.+|+.||..|. ||||++|++...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~-----~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~D 104 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINIT-----NNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKD 104 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccC-----CCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence 45899999999999999999998776 66789999997532 234556999999996 9999999999976
Q ss_pred C--ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 161 S--HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 161 ~--~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
. ....||+||+.+.|...+... ++...+|.|+.||+.||.|+|++
T Consensus 105 p~SktpaLiFE~v~n~Dfk~ly~t---------------------------------l~d~dIryY~~elLkALdyCHS~ 151 (338)
T KOG0668|consen 105 PESKTPSLIFEYVNNTDFKQLYPT---------------------------------LTDYDIRYYIYELLKALDYCHSM 151 (338)
T ss_pred ccccCchhHhhhhccccHHHHhhh---------------------------------hchhhHHHHHHHHHHHHhHHHhc
Confidence 4 467899999998887654332 23456689999999999999999
Q ss_pred CceeccCCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||+|||+||.|++|+.. -.++|+|+|+|..+....
T Consensus 152 GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~-------------------------------------------- 187 (338)
T KOG0668|consen 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-------------------------------------------- 187 (338)
T ss_pred CcccccCCcceeeechhhceeeeeecchHhhcCCCc--------------------------------------------
Confidence 99999999999999954 479999999995433211
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~P 396 (517)
..+-.+.+..|--||.+..-. |+...|+|||||++..|+..+-|
T Consensus 188 -----------------------------------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkep 232 (338)
T KOG0668|consen 188 -----------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 232 (338)
T ss_pred -----------------------------------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCc
Confidence 122336788899999997654 89999999999999999998877
Q ss_pred C-CCCChHHHHHHHhcC-------------CCCCCCC-C----CCCchhH----------HhhhhHHHHHHHhccCCccc
Q 010140 397 F-KGENNEKTLINILKK-------------PLTFPRI-G----VSSSKEF----------EEVVKLQDLISKLLVKNPKK 447 (517)
Q Consensus 397 f-~~~~~~~~~~~i~~~-------------~~~~p~~-~----~~~~~~~----------~~~~~l~dLi~~~L~~dP~~ 447 (517)
| .|.++.+.+.+|.+- ....++. . .-....| -..+++.|||.++|..|-.+
T Consensus 233 FFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqe 312 (338)
T KOG0668|consen 233 FFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQE 312 (338)
T ss_pred ccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccc
Confidence 5 566666666555320 0111000 0 0000001 11246899999999999999
Q ss_pred ccCCCCChHHhhcCCCcCCCC
Q 010140 448 RIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 448 R~t~~~~~~ell~hp~f~~~~ 468 (517)
|+|+. |++.||||..+.
T Consensus 313 RlTak----Eam~HpyF~~~~ 329 (338)
T KOG0668|consen 313 RLTAK----EAMAHPYFAPVR 329 (338)
T ss_pred ccchH----HHhcCchHHHHH
Confidence 99998 999999998653
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-40 Score=297.33 Aligned_cols=265 Identities=22% Similarity=0.317 Sum_probs=200.3
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHH-HhcCCCCccceeeee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL-TMLDHPFLPTLYAEF 158 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il-~~l~HpnIv~l~~~~ 158 (517)
.+..++.+-+..||.|+||+|++..++. +++..|||.++.... .....++..|.... +.-+.||||++||..
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~-----sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKP-----SGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCc-----cCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 3555677778899999999999999887 789999999986654 34456677777654 445899999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHh---CCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQR---QPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
-.++..|+.||+| ..+|..+... -....+++. .+-.|..-.+.||.||
T Consensus 133 F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~----------------------------Ilg~ItvatV~AL~yL 183 (361)
T KOG1006|consen 133 FSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPEN----------------------------ILGHITVATVDALDYL 183 (361)
T ss_pred hcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHh----------------------------hhhheeeeehhHHHHH
Confidence 9999999999999 6677554332 111222221 1124556678999999
Q ss_pred Hhc-CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 236 HMM-GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 236 H~~-~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
-.. +||||||||+|||++..|.+||||||++-.+-.
T Consensus 184 K~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~------------------------------------------- 220 (361)
T KOG1006|consen 184 KEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD------------------------------------------- 220 (361)
T ss_pred HHHhhhhhccCChhheEEecCCCEeeecccchHhHHH-------------------------------------------
Confidence 865 899999999999999999999999999722110
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC--CCCccchHHHHHHHHHHHhh
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLY 392 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~--~~~~~~DiWSlGvil~ellt 392 (517)
..-.+.-.|-..|||||.+... +|+.++||||||++|||+.|
T Consensus 221 ------------------------------------SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAt 264 (361)
T KOG1006|consen 221 ------------------------------------SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVAT 264 (361)
T ss_pred ------------------------------------HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeec
Confidence 0001223688899999999643 58999999999999999999
Q ss_pred CCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 393 GTTPFKGENN-EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 393 G~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
|..||.+-+. .+.+..++.+.++.. .......+....+..+|.-||.+|-.+||... +|+++||++.
T Consensus 265 G~fPyr~w~svfeql~~Vv~gdpp~l---~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~----~Lk~~~fyr~ 332 (361)
T KOG1006|consen 265 GNFPYRKWDSVFEQLCQVVIGDPPIL---LFDKECVHYSFSMVRFINTCLIKDRSDRPKYD----DLKKFPFYRM 332 (361)
T ss_pred CCCCcchHHHHHHHHHHHHcCCCCee---cCcccccccCHHHHHHHHHHhhcccccCcchh----hhhcCchhhh
Confidence 9999987654 455666666544322 22222233445689999999999999999998 9999999974
No 384
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=296.61 Aligned_cols=270 Identities=27% Similarity=0.381 Sum_probs=207.1
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc-
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH- 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~- 162 (517)
.+|.-++.+|.|+- .|..+-+.- .++.||+|.+... .......++..+|..++..++|+||++++.+|....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v-----~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQV-----LGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT 89 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhh-----ccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCcccc
Confidence 57888999999998 666666543 6788999988766 333455677888999999999999999999996543
Q ss_pred -----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 163 -----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 163 -----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
.+|+||||+ .++|.+.+..... -..++++..|++.|++|||+
T Consensus 90 l~~~~e~y~v~e~m-~~nl~~vi~~elD--------------------------------H~tis~i~yq~~~~ik~lhs 136 (369)
T KOG0665|consen 90 LEEFQEVYLVMELM-DANLCQVILMELD--------------------------------HETISYILYQMLCGIKHLHS 136 (369)
T ss_pred HHHHHhHHHHHHhh-hhHHHHHHHHhcc--------------------------------hHHHHHHHHHHHHHHHHHHh
Confidence 579999999 6799887653211 11235778999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
.||+||||||+||++..++.+||.|||+|+.-+.
T Consensus 137 ~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~---------------------------------------------- 170 (369)
T KOG0665|consen 137 AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT---------------------------------------------- 170 (369)
T ss_pred cceeecccCcccceecchhheeeccchhhcccCc----------------------------------------------
Confidence 9999999999999999999999999999843211
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
....+.++.|+.|.|||++.+..|...+||||+||++.||++|+..|
T Consensus 171 ---------------------------------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf 217 (369)
T KOG0665|consen 171 ---------------------------------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF 217 (369)
T ss_pred ---------------------------------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence 12345678999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHhcCC-------------------------------CCCCCCCCCCchhH--HhhhhHHHHHHHhccCC
Q 010140 398 KGENNEKTLINILKKP-------------------------------LTFPRIGVSSSKEF--EEVVKLQDLISKLLVKN 444 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~-------------------------------~~~p~~~~~~~~~~--~~~~~l~dLi~~~L~~d 444 (517)
.|.+..+.+.++.... ..+|+.......+. .....++||+.+||..|
T Consensus 218 ~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~ 297 (369)
T KOG0665|consen 218 PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID 297 (369)
T ss_pred cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence 9877665555553210 01222221111111 12235899999999999
Q ss_pred cccccCCCCChHHhhcCCCcCCCCcccccCCCCC
Q 010140 445 PKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPP 478 (517)
Q Consensus 445 P~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~ 478 (517)
|++|.++. ++|+||||+ -|-.-..+..|
T Consensus 298 pe~Risv~----daL~HPY~~--vw~~~~ev~ap 325 (369)
T KOG0665|consen 298 PEKRISVD----DALRHPYIK--VWYDPDEVEAP 325 (369)
T ss_pred hhhcccHH----HHhcCCeee--eecccccccCC
Confidence 99999998 999999999 56444444433
No 385
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=324.44 Aligned_cols=262 Identities=22% Similarity=0.293 Sum_probs=214.9
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
.++......|.++||.|.||+||+|+.+.+.. ....||||.++..-. .++...|..|+.||-+++||||++|.|+.
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgk--re~~VAIKTLK~Gyt--ekqrrdFL~EAsIMGQFdHPNIIrLEGVV 699 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGK--REITVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIRLEGVV 699 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCC--cceeEEEeeeccCcc--HHHHhhhhhhhhhcccCCCCcEEEEEEEE
Confidence 45667788999999999999999999987543 457899999986533 35667888999999999999999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
.....+.||.|||++|+|..+|+.+.+. +..-+. -.+++.|+.|+.||-+.
T Consensus 700 Tks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQL----------------------------VgMLrGIAsGMkYLsdm 750 (996)
T KOG0196|consen 700 TKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQL----------------------------VGMLRGIASGMKYLSDM 750 (996)
T ss_pred ecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehH----------------------------HHHHHHHHHHhHHHhhc
Confidence 9999999999999999999999887643 333222 26779999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
|+|||||..+|||++.+-.+|++|||+++.+.+.+.-
T Consensus 751 ~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~------------------------------------------- 787 (996)
T KOG0196|consen 751 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA------------------------------------------- 787 (996)
T ss_pred CchhhhhhhhheeeccceEEEeccccceeecccCCCc-------------------------------------------
Confidence 9999999999999999999999999999755432210
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHh-hCCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ell-tG~~Pf 397 (517)
......-.-...|.|||.+....++.++||||+||+|||.+ .|+.||
T Consensus 788 --------------------------------~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 788 --------------------------------AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred --------------------------------cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 00001111245899999999999999999999999999977 599999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
...++.+.+..|.++-.-.|+-.++ ..|..|+..||++|-..||.+. ||..
T Consensus 836 WdmSNQdVIkaIe~gyRLPpPmDCP--------~aL~qLMldCWqkdR~~RP~F~----qiV~ 886 (996)
T KOG0196|consen 836 WDMSNQDVIKAIEQGYRLPPPMDCP--------AALYQLMLDCWQKDRNRRPKFA----QIVS 886 (996)
T ss_pred cccchHHHHHHHHhccCCCCCCCCc--------HHHHHHHHHHHHHHhhcCCCHH----HHHH
Confidence 9999999999887765444433333 3589999999999999999998 5554
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=307.03 Aligned_cols=268 Identities=29% Similarity=0.394 Sum_probs=207.3
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH----HHHHHHHhHHHHHHHHHHhcCCCCccceeee
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA----LAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~----~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 157 (517)
..++|-++.+||+|||+.||+|.+.. .++.||+|+-.... ....+..+..-+|.+|.+.|+||.||++|++
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~-----EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDy 535 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLT-----EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDY 535 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccc-----hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeee
Confidence 34789999999999999999999886 68999999854221 1233456777889999999999999999999
Q ss_pred ee-cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 158 FE-ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 158 ~~-~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
|. +.+.+|-|+|||+|.||.-|++.+ +.+.+.++ |.|+-||+.||.||.
T Consensus 536 fslDtdsFCTVLEYceGNDLDFYLKQh--klmSEKEA----------------------------RSIiMQiVnAL~YLN 585 (775)
T KOG1151|consen 536 FSLDTDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEA----------------------------RSIIMQIVNALKYLN 585 (775)
T ss_pred eeeccccceeeeeecCCCchhHHHHhh--hhhhHHHH----------------------------HHHHHHHHHHHHHHh
Confidence 96 567899999999999999888775 33334433 577889999999999
Q ss_pred hc--CceeccCCCCceEEc---cCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccc
Q 010140 237 MM--GIVYRDLKPENVLVR---EDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVS 311 (517)
Q Consensus 237 ~~--~iiHrDLKp~NILl~---~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (517)
+. .|||-||||.|||+- ..|.+||+|||+++.++......
T Consensus 586 EikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~----------------------------------- 630 (775)
T KOG1151|consen 586 EIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNS----------------------------------- 630 (775)
T ss_pred ccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCc-----------------------------------
Confidence 87 499999999999994 45789999999997765322110
Q ss_pred cccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC----CCCccchHHHHHHHH
Q 010140 312 HGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ----GHGSAVDWWTLGVFL 387 (517)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~----~~~~~~DiWSlGvil 387 (517)
......+....||.+|++||.+.-. ..+.++||||+|||+
T Consensus 631 ------------------------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 631 ------------------------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred ------------------------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 0001223456899999999998533 368899999999999
Q ss_pred HHHhhCCCCCCCCChH-HHHH--HHh-cCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 388 YEMLYGTTPFKGENNE-KTLI--NIL-KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 388 ~elltG~~Pf~~~~~~-~~~~--~i~-~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
|.++.|+.||...-.. +++. -|+ .....||......+ ++++||++||++.-++|.... +|-.|||
T Consensus 675 yQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVss-------eAkaFIRRCLaYRKeDR~DV~----qLA~dpy 743 (775)
T KOG1151|consen 675 YQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSS-------EAKAFIRRCLAYRKEDRIDVQ----QLACDPY 743 (775)
T ss_pred hhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCH-------HHHHHHHHHHHhhhhhhhhHH----HHccCcc
Confidence 9999999999765432 2221 122 23445655444433 489999999999999998876 9999999
Q ss_pred cCC
Q 010140 464 FKG 466 (517)
Q Consensus 464 f~~ 466 (517)
|..
T Consensus 744 llP 746 (775)
T KOG1151|consen 744 LLP 746 (775)
T ss_pred ccc
Confidence 974
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.4e-36 Score=311.90 Aligned_cols=294 Identities=21% Similarity=0.230 Sum_probs=190.1
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCC-----------CCCCCceeeeeecchHHHHHHH-----------HHhH
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPM-----------VGLPQCFYAMKVVDREALAIRK-----------KLHR 135 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~-----------~~~~~~~vAiK~i~~~~~~~~~-----------~~~~ 135 (517)
..++..++|++.++||+|+||+||+|...... ....++.||||.+......... ..+.
T Consensus 139 ~~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~ 218 (507)
T PLN03224 139 NSRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAET 218 (507)
T ss_pred CCCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccch
Confidence 34567889999999999999999999753211 1124567999998643221111 1223
Q ss_pred HHHHHHHHHhcCCCCc-----cceeeeeec--------CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhh
Q 010140 136 ADMEKVILTMLDHPFL-----PTLYAEFEA--------SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFF 202 (517)
Q Consensus 136 ~~~E~~il~~l~HpnI-----v~l~~~~~~--------~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~ 202 (517)
...|+.++.+++|.++ ++++++|.. .+..||||||+++|+|.+++...... +.......+
T Consensus 219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~-~~~~L~e~l------ 291 (507)
T PLN03224 219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGP-FPGCLEEFM------ 291 (507)
T ss_pred hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCC-CcchHHHHH------
Confidence 3457777888866554 677777643 35689999999999999998753211 110000000
Q ss_pred hhhcCC-ccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcch
Q 010140 203 FFYNNL-GFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLS 281 (517)
Q Consensus 203 ~~~~~~-~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~ 281 (517)
...... ..+.........++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus 292 ~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-------- 363 (507)
T PLN03224 292 MAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-------- 363 (507)
T ss_pred hcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC--------
Confidence 000000 00111112233456789999999999999999999999999999999999999999984321100
Q ss_pred HHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCC
Q 010140 282 FEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTH 361 (517)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 361 (517)
........+|+
T Consensus 364 ---------------------------------------------------------------------~~~~~~g~~tp 374 (507)
T PLN03224 364 ---------------------------------------------------------------------NFNPLYGMLDP 374 (507)
T ss_pred ---------------------------------------------------------------------ccCccccCCCc
Confidence 00011123588
Q ss_pred CcccchhhcCCC--------------------CC--ccchHHHHHHHHHHHhhCCC-CCCCCChHH-----------HHH
Q 010140 362 EYLAPEVISGQG--------------------HG--SAVDWWTLGVFLYEMLYGTT-PFKGENNEK-----------TLI 407 (517)
Q Consensus 362 ~y~APE~l~~~~--------------------~~--~~~DiWSlGvil~elltG~~-Pf~~~~~~~-----------~~~ 407 (517)
.|+|||++.... |+ .+.||||+||++|+|++|.. ||.+..... ...
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 999999986432 11 24799999999999999986 775432111 111
Q ss_pred HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCc---ccccCCCCChHHhhcCCCcCC
Q 010140 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNP---KKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 408 ~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP---~~R~t~~~~~~ell~hp~f~~ 466 (517)
.+......++.... .....+|||.+||..+| .+|+|+. |+|+||||..
T Consensus 455 ~~~~~~~~~~~~d~-------~s~~~~dLi~~LL~~~~~~~~~RlSa~----eaL~Hp~f~~ 505 (507)
T PLN03224 455 MYKGQKYDFSLLDR-------NKEAGWDLACKLITKRDQANRGRLSVG----QALSHRFFLP 505 (507)
T ss_pred hhcccCCCcccccc-------cChHHHHHHHHHhccCCCCcccCCCHH----HHhCCCCcCC
Confidence 11222223322111 22358999999999876 6899998 9999999953
No 388
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=316.96 Aligned_cols=252 Identities=27% Similarity=0.353 Sum_probs=195.4
Q ss_pred ceEEeeeeccceeE-EEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCce
Q 010140 86 FRLLRRLGSGDIGN-VYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHY 163 (517)
Q Consensus 86 y~i~~~LG~G~fG~-Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 163 (517)
|.-.+.+|.|+-|+ ||+|...+ +.||||.+..+. .....+|+.+|+.- +|||||++|+.-.+..+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~-------R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF 577 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEG-------REVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQF 577 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCC-------ceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCce
Confidence 44456789999885 89998864 789999986553 23455699999998 69999999999999999
Q ss_pred eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
.||.+|+| ..+|.++++.. ......... ...+..+.|++.||++||+.+||||
T Consensus 578 ~YIalELC-~~sL~dlie~~-~~d~~~~~~-------------------------i~~~~~l~q~~~GlaHLHsl~iVHR 630 (903)
T KOG1027|consen 578 LYIALELC-ACSLQDLIESS-GLDVEMQSD-------------------------IDPISVLSQIASGLAHLHSLKIVHR 630 (903)
T ss_pred EEEEehHh-hhhHHHHHhcc-ccchhhccc-------------------------ccHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999 67999999874 111111110 1123567899999999999999999
Q ss_pred cCCCCceEEcc---C--CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 244 DLKPENVLVRE---D--GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 244 DLKp~NILl~~---~--~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||||.||||+. + .+++|+|||+++++...+.-
T Consensus 631 DLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS------------------------------------------- 667 (903)
T KOG1027|consen 631 DLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS------------------------------------------- 667 (903)
T ss_pred cCCCceEEEEccCCCcceeEEecccccccccCCCcch-------------------------------------------
Confidence 99999999975 3 47899999999776532211
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhC-CCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYG-TTPF 397 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG-~~Pf 397 (517)
-.+..+..||-+|+|||++....-+.++|||||||++|+.++| ..||
T Consensus 668 --------------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpF 715 (903)
T KOG1027|consen 668 --------------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPF 715 (903)
T ss_pred --------------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCC
Confidence 1124456799999999999998888899999999999999986 9999
Q ss_pred CCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 398 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
...... -.+|+.+............. ++.|||.+||+++|..||++. ++|.||||
T Consensus 716 Gd~~~R--~~NIl~~~~~L~~L~~~~d~------eA~dLI~~ml~~dP~~RPsa~----~VL~HPlF 770 (903)
T KOG1027|consen 716 GDSLER--QANILTGNYTLVHLEPLPDC------EAKDLISRMLNPDPQLRPSAT----DVLNHPLF 770 (903)
T ss_pred CchHHh--hhhhhcCccceeeeccCchH------HHHHHHHHhcCCCcccCCCHH----HHhCCCcc
Confidence 765433 34566665443322222111 489999999999999999998 99999999
No 389
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=280.94 Aligned_cols=267 Identities=23% Similarity=0.281 Sum_probs=199.8
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc--
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-- 162 (517)
+.+--+.||.|+||.||.+.+.+ +++.||+|.+..-. ..-...+++.+|+.+|..++|.||+..++..+...
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPR-----dgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d 127 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPR-----SGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS 127 (449)
T ss_pred cCCCCCcccccceeEEEeccCCC-----CccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch
Confidence 45667889999999999999887 78899999886443 22344577888999999999999999998876543
Q ss_pred ---eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 163 ---YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.+|+|+|++ ..||.+++-.. ..+ +...++.++.||++||.|||+.|
T Consensus 128 fFqEiYV~TELm-QSDLHKIIVSP--Q~L----------------------------s~DHvKVFlYQILRGLKYLHsA~ 176 (449)
T KOG0664|consen 128 FFQELYVLTELM-QSDLHKIIVSP--QAL----------------------------TPDHVKVFVYQILRGLKYLHTAN 176 (449)
T ss_pred HHHHHHHHHHHH-HhhhhheeccC--CCC----------------------------CcchhhhhHHHHHhhhHHHhhcc
Confidence 468889998 56887765432 222 22334467899999999999999
Q ss_pred ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccc
Q 010140 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKK 319 (517)
Q Consensus 240 iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (517)
|.||||||.|+|++.+..+||||||+++.......
T Consensus 177 ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~--------------------------------------------- 211 (449)
T KOG0664|consen 177 ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR--------------------------------------------- 211 (449)
T ss_pred hhhccCCCccEEeccCceEEecccccccccchhhh---------------------------------------------
Confidence 99999999999999999999999999965332111
Q ss_pred cccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCC
Q 010140 320 AVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
...+.-+-|.+|+|||++.|.. |+.++||||+|||+.||+..+..|.
T Consensus 212 --------------------------------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 212 --------------------------------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred --------------------------------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 0112235688999999999976 8999999999999999999999999
Q ss_pred CCChHHHHHHHhc-----------------------CCCCCCCCCCCC--chhHHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 399 GENNEKTLINILK-----------------------KPLTFPRIGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 399 ~~~~~~~~~~i~~-----------------------~~~~~p~~~~~~--~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
..++.+.+..|.. .....|...... ........+..+++..||..||.+|++.+
T Consensus 260 Aq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~- 338 (449)
T KOG0664|consen 260 AAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVE- 338 (449)
T ss_pred ccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHh-
Confidence 8777665554432 222222211100 00001112467899999999999999988
Q ss_pred ChHHhhcCCCcCCCCc
Q 010140 454 GSVEIKRHEFFKGINW 469 (517)
Q Consensus 454 ~~~ell~hp~f~~~~~ 469 (517)
+++.|+|.....+
T Consensus 339 ---~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 339 ---EALQHRYLEEGRL 351 (449)
T ss_pred ---hhcccccccccce
Confidence 9999999876543
No 390
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=6.3e-35 Score=278.17 Aligned_cols=243 Identities=44% Similarity=0.695 Sum_probs=191.9
Q ss_pred ceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEecCCCc
Q 010140 96 DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD 175 (517)
Q Consensus 96 ~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~ 175 (517)
+||.||+|.... +++.+|+|++........ ...+..|+.++++++|+||+++++.+......+++|||+++++
T Consensus 1 ~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKK-----TGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECC-----CCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCC
Confidence 589999999876 578899999976543221 4667779999999999999999999999999999999999999
Q ss_pred hhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccC
Q 010140 176 LYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVRED 255 (517)
Q Consensus 176 L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~ 255 (517)
|..++..... +... .+..++.+++.+|.|||+.+|+|+||+|+||+++.+
T Consensus 74 L~~~~~~~~~--~~~~----------------------------~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~ 123 (244)
T smart00220 74 LFDLLKKRGR--LSED----------------------------EARFYARQILSALEYLHSNGIIHRDLKPENILLDED 123 (244)
T ss_pred HHHHHHhccC--CCHH----------------------------HHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC
Confidence 9998866422 1111 123678999999999999999999999999999999
Q ss_pred CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCC
Q 010140 256 GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHH 335 (517)
Q Consensus 256 ~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (517)
+.++|+|||.+.......
T Consensus 124 ~~~~l~d~~~~~~~~~~~-------------------------------------------------------------- 141 (244)
T smart00220 124 GHVKLADFGLARQLDPGG-------------------------------------------------------------- 141 (244)
T ss_pred CcEEEccccceeeecccc--------------------------------------------------------------
Confidence 999999999984322100
Q ss_pred CccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCC-CChHHHHHHHhcCCC
Q 010140 336 DQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-ENNEKTLINILKKPL 414 (517)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~ 414 (517)
......|+..|++||.+.+..++.++||||||+++|+|++|..||.. .........+.....
T Consensus 142 -----------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~ 204 (244)
T smart00220 142 -----------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKP 204 (244)
T ss_pred -----------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCC
Confidence 11233578899999999988889999999999999999999999988 444444444443333
Q ss_pred CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 415 ~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
........ ...++.+++.+||..||++||++. ++++||||
T Consensus 205 ~~~~~~~~------~~~~~~~~i~~~l~~~p~~Rp~~~----~~~~~~~~ 244 (244)
T smart00220 205 PFPPPEWK------ISPEAKDLIRKLLVKDPEKRLTAE----EALQHPFF 244 (244)
T ss_pred CCcccccc------CCHHHHHHHHHHccCCchhccCHH----HHhhCCCC
Confidence 32221110 122589999999999999999998 99999997
No 391
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=303.80 Aligned_cols=262 Identities=28% Similarity=0.441 Sum_probs=209.7
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecC
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 161 (517)
..++|+++.++|.|+||.||+++++. +++..|+|+++-+.. ....-++.|+-+++.++|||||.+++.+-..
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~-----s~elaavkvVkLep~---dd~~~iqqei~~~~dc~h~nivay~gsylr~ 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKR-----SGELAAVKVVKLEPG---DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR 84 (829)
T ss_pred CccchhheeeecCCcccchhhhcccc-----cCchhhheeeeccCC---ccccccccceeeeecCCCcChHHHHhhhhhh
Confidence 44799999999999999999999998 788999999976542 3344555699999999999999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+.+|++||||.||+|.+.-.- +..+...++.+.+++.+.||+|||++|=+
T Consensus 85 dklwicMEycgggslQdiy~~------------------------------TgplselqiayvcRetl~gl~ylhs~gk~ 134 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYHV------------------------------TGPLSELQIAYVCRETLQGLKYLHSQGKI 134 (829)
T ss_pred cCcEEEEEecCCCcccceeee------------------------------cccchhHHHHHHHhhhhccchhhhcCCcc
Confidence 999999999999999774322 11222333447789999999999999999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
|||||-.|||++..|.+|++|||.+..+..
T Consensus 135 hRdiKGanilltd~gDvklaDfgvsaqita-------------------------------------------------- 164 (829)
T KOG0576|consen 135 HRDIKGANILLTDEGDVKLADFGVSAQITA-------------------------------------------------- 164 (829)
T ss_pred cccccccceeecccCceeecccCchhhhhh--------------------------------------------------
Confidence 999999999999999999999999733220
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc---CCCCCccchHHHHHHHHHHHhhCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~---~~~~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
.-.+..+++|||+|||||+-. ...|...+|||++|+...|+.--++|..
T Consensus 165 ----------------------------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf 216 (829)
T KOG0576|consen 165 ----------------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF 216 (829)
T ss_pred ----------------------------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc
Confidence 012345679999999999863 4469999999999999999999999987
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCC
Q 010140 399 GENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467 (517)
Q Consensus 399 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~ 467 (517)
...+...+...-+..+..|....... | ...+-+|++.+|.++|++||+++ .+|.|||....
T Consensus 217 dlhpmr~l~LmTkS~~qpp~lkDk~k--w--s~~fh~fvK~altknpKkRptae----klL~h~fvs~~ 277 (829)
T KOG0576|consen 217 DLHPMRALFLMTKSGFQPPTLKDKTK--W--SEFFHNFVKGALTKNPKKRPTAE----KLLQHPFVSQT 277 (829)
T ss_pred ccchHHHHHHhhccCCCCCcccCCcc--c--hHHHHHHHHHHhcCCCccCCChh----hheeceeeccc
Confidence 77776666555555544443332211 1 12378999999999999999998 88899998753
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=259.19 Aligned_cols=222 Identities=24% Similarity=0.318 Sum_probs=173.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 159 (517)
+..++..-+..||+|+||.|-+.++.. ++...|+|.+....- .+..++..+|+.+..+. .+|.+|.+||.+.
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~-----sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~ 115 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQ-----SGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALF 115 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeecc-----CCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhh
Confidence 445667788899999999999999887 789999999875432 24456667788776554 7999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc-
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM- 238 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~- 238 (517)
....+|+.||.| ..+|..+..+-......+++.. +-+|+..++.||.|||++
T Consensus 116 regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~v--------------------------lGkIa~Svv~al~~L~~kL 168 (282)
T KOG0984|consen 116 REGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDV--------------------------LGKIAVSVVHALEFLHSKL 168 (282)
T ss_pred ccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHH--------------------------hhHhHHHHHHHHHHHHHHh
Confidence 999999999999 6688776554322222232222 237889999999999987
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
.|||||+||+||||+.+|+||+||||.+-.+.+.-
T Consensus 169 ~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--------------------------------------------- 203 (282)
T KOG0984|consen 169 SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--------------------------------------------- 203 (282)
T ss_pred hhhhccCCcceEEEccCCcEEEcccccceeehhhh---------------------------------------------
Confidence 89999999999999999999999999983221100
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC----CCCCccchHHHHHHHHHHHhhCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG----QGHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~----~~~~~~~DiWSlGvil~elltG~ 394 (517)
-.+--.|-..|||||.+.. ..|+.++||||||+++.||.+++
T Consensus 204 ----------------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr 249 (282)
T KOG0984|consen 204 ----------------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILR 249 (282)
T ss_pred ----------------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcc
Confidence 0011257889999999864 36899999999999999999999
Q ss_pred CCCCC-CChHHHHHHHhcCCCC
Q 010140 395 TPFKG-ENNEKTLINILKKPLT 415 (517)
Q Consensus 395 ~Pf~~-~~~~~~~~~i~~~~~~ 415 (517)
.||.. .++.+.+.++++.+.+
T Consensus 250 ~PY~~w~tpF~qLkqvVeep~P 271 (282)
T KOG0984|consen 250 FPYESWGTPFQQLKQVVEEPSP 271 (282)
T ss_pred ccccccCCHHHHHHHHhcCCCC
Confidence 99985 4677888888876543
No 393
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=284.93 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=181.6
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHh--cCCCCccceeeeee
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM--LDHPFLPTLYAEFE 159 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~~~~~ 159 (517)
.+....+...||+|.||.||+|+..+ +.||||++.... ...+..|..|.+. ++|+||++++++-+
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL~~-------~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek 274 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQLDN-------RLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEK 274 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhccC-------ceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhc
Confidence 45678899999999999999998764 899999998653 2345557777666 48999999999876
Q ss_pred cCc----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHH
Q 010140 160 ASH----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYL 235 (517)
Q Consensus 160 ~~~----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL 235 (517)
... .++||+||.+.|+|.++|..+- .++...++++..|++||+||
T Consensus 275 r~t~~~~eywLVt~fh~kGsL~dyL~~nt-------------------------------isw~~~cria~SmarGLa~L 323 (534)
T KOG3653|consen 275 RGTADRMEYWLVTEFHPKGSLCDYLKANT-------------------------------ISWNSLCRIAESMARGLAHL 323 (534)
T ss_pred cCCccccceeEEeeeccCCcHHHHHHhcc-------------------------------ccHHHHHHHHHHHHHHHHHh
Confidence 554 7899999999999999998741 12234468899999999999
Q ss_pred Hhc---------CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccc
Q 010140 236 HMM---------GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSC 306 (517)
Q Consensus 236 H~~---------~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (517)
|+. .|+|||||..||||..|++..|+|||+|.++.....
T Consensus 324 Hee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~-------------------------------- 371 (534)
T KOG3653|consen 324 HEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKP-------------------------------- 371 (534)
T ss_pred cccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCC--------------------------------
Confidence 973 599999999999999999999999999965542110
Q ss_pred ccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CC-----ccchH
Q 010140 307 FSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HG-----SAVDW 380 (517)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~-----~~~Di 380 (517)
......-+||.+|||||++.|.. +. .+.||
T Consensus 372 --------------------------------------------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~Dv 407 (534)
T KOG3653|consen 372 --------------------------------------------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDV 407 (534)
T ss_pred --------------------------------------------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHH
Confidence 01112348999999999998753 22 36899
Q ss_pred HHHHHHHHHHhhCCC------------CCCC---C-ChHHHHHHHh-c--CCCCCCCCCCCCchhHHhhhhHHHHHHHhc
Q 010140 381 WTLGVFLYEMLYGTT------------PFKG---E-NNEKTLINIL-K--KPLTFPRIGVSSSKEFEEVVKLQDLISKLL 441 (517)
Q Consensus 381 WSlGvil~elltG~~------------Pf~~---~-~~~~~~~~i~-~--~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L 441 (517)
||+|.+||||++... ||.. . ...+.++..+ . ..+.+|...... .....+++.|..||
T Consensus 408 YamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h----~~~~~l~et~EeCW 483 (534)
T KOG3653|consen 408 YAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH----AGMAVLCETIEECW 483 (534)
T ss_pred HHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC----ccHHHHHHHHHHHc
Confidence 999999999997422 2321 1 1122333332 2 223333222111 22335899999999
Q ss_pred cCCcccccCCC
Q 010140 442 VKNPKKRIGSL 452 (517)
Q Consensus 442 ~~dP~~R~t~~ 452 (517)
+.||+.|+|+.
T Consensus 484 DhDaeARLTA~ 494 (534)
T KOG3653|consen 484 DHDAEARLTAG 494 (534)
T ss_pred CCchhhhhhhH
Confidence 99999999993
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=295.58 Aligned_cols=203 Identities=31% Similarity=0.504 Sum_probs=173.8
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-----HHHHhHHHHHHHHHHhcC---CCCccc
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-----RKKLHRADMEKVILTMLD---HPFLPT 153 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-----~~~~~~~~~E~~il~~l~---HpnIv~ 153 (517)
...+|..++.||+|+||.|++|.++. ....|+||.+.++..-. ..++..+-.|+.||..|+ |+||++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~-----n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlK 633 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKE-----NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILK 633 (772)
T ss_pred ccccceeeeeccccccceEEEeeecc-----cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhh
Confidence 34679999999999999999999997 57889999998876533 234455667999999997 999999
Q ss_pred eeeeeecCceeEEEEEec-CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH
Q 010140 154 LYAEFEASHYSCLVMEYC-PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL 232 (517)
Q Consensus 154 l~~~~~~~~~~~lV~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 232 (517)
++++|++++++||+||-- +|.||++++..+ .++.+.+++ .|.+|++.|+
T Consensus 634 lLdfFEddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk----------------------------~IFkQV~agi 683 (772)
T KOG1152|consen 634 LLDFFEDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAK----------------------------LIFKQVVAGI 683 (772)
T ss_pred hhheeecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHH----------------------------HHHHHHHhcc
Confidence 999999999999999984 567999999887 456666666 4458999999
Q ss_pred HHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccc
Q 010140 233 EYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSH 312 (517)
Q Consensus 233 ~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (517)
++||++||||||||-||++++.+|.+||+|||.|....
T Consensus 684 ~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~k------------------------------------------ 721 (772)
T KOG1152|consen 684 KHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK------------------------------------------ 721 (772)
T ss_pred ccccccCceecccccccEEEecCCeEEEeeccchhhhc------------------------------------------
Confidence 99999999999999999999999999999999872211
Q ss_pred ccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC-CccchHHHHHHHHHHHh
Q 010140 313 GKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEML 391 (517)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~-~~~~DiWSlGvil~ell 391 (517)
+.....++||..|.|||++.|..| +..-|||+||++||.++
T Consensus 722 --------------------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytiv 763 (772)
T KOG1152|consen 722 --------------------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIV 763 (772)
T ss_pred --------------------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEE
Confidence 112346789999999999999987 88999999999999999
Q ss_pred hCCCCCCC
Q 010140 392 YGTTPFKG 399 (517)
Q Consensus 392 tG~~Pf~~ 399 (517)
..+.||..
T Consensus 764 ykenpyyn 771 (772)
T KOG1152|consen 764 YKENPYYN 771 (772)
T ss_pred eccCCCcC
Confidence 99999864
No 395
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=279.35 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=184.5
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHH--HhcCCCCccceeeeeecC
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL--TMLDHPFLPTLYAEFEAS 161 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il--~~l~HpnIv~l~~~~~~~ 161 (517)
.+..+++.||+|.||+||+|++++ ..||||++...... ...+|.+|. ..|+|+||+.+++.-..+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrG-------e~VAVKiF~srdE~------SWfrEtEIYqTvmLRHENILgFIaaD~~~ 277 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRG-------EDVAVKIFSSRDER------SWFRETEIYQTVMLRHENILGFIAADNKD 277 (513)
T ss_pred heeEEEEEecCccccceeeccccC-------CceEEEEecccchh------hhhhHHHHHHHHHhccchhhhhhhccccC
Confidence 568899999999999999999986 67999999754321 222355554 457999999999876433
Q ss_pred c----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 162 H----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 162 ~----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+ .+|||.+|.+.|+|+++|.+. .+..... .+++..++.||++||.
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~m----------------------------l~LalS~AsGLaHLH~ 326 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGM----------------------------LKLALSIASGLAHLHM 326 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhhc---cCCHHHH----------------------------HHHHHHHhhhHHHHHH
Confidence 2 589999999999999999874 2222222 2678899999999996
Q ss_pred c--------CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccc
Q 010140 238 M--------GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSS 309 (517)
Q Consensus 238 ~--------~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (517)
. .|.|||||..|||+..+|.+-|+|+|||-..+....
T Consensus 327 eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~----------------------------------- 371 (513)
T KOG2052|consen 327 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTD----------------------------------- 371 (513)
T ss_pred HHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCC-----------------------------------
Confidence 4 499999999999999999999999999944332111
Q ss_pred cccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC----C--CccchHHHH
Q 010140 310 VSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG----H--GSAVDWWTL 383 (517)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~----~--~~~~DiWSl 383 (517)
......+..+||.+|||||++...- + -..+|||||
T Consensus 372 ---------------------------------------~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYaf 412 (513)
T KOG2052|consen 372 ---------------------------------------TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAF 412 (513)
T ss_pred ---------------------------------------cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHH
Confidence 1112234558999999999997542 1 236899999
Q ss_pred HHHHHHHhh----C------CCCCCCC----ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCccccc
Q 010140 384 GVFLYEMLY----G------TTPFKGE----NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449 (517)
Q Consensus 384 Gvil~ellt----G------~~Pf~~~----~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~ 449 (517)
|.++||++. | .+||.+. ...+.+.+++......|.....+.. .+....+..||+.||..||..|.
T Consensus 413 gLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s-~~~l~~m~klMkeCW~~Np~aRl 491 (513)
T KOG2052|consen 413 GLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKS-DPALRVMAKLMKECWYANPAARL 491 (513)
T ss_pred HHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccccc-CHHHHHHHHHHHHhhcCCchhhh
Confidence 999999984 2 6788753 3456666666544444444333322 13445678999999999999999
Q ss_pred CCC
Q 010140 450 GSL 452 (517)
Q Consensus 450 t~~ 452 (517)
|+-
T Consensus 492 tAL 494 (513)
T KOG2052|consen 492 TAL 494 (513)
T ss_pred HHH
Confidence 985
No 396
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=307.21 Aligned_cols=278 Identities=22% Similarity=0.278 Sum_probs=210.8
Q ss_pred cCCcCCCCceEEeeeeccceeEEEEEEEecCCCC--CCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccce
Q 010140 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVG--LPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTL 154 (517)
Q Consensus 78 ~~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l 154 (517)
.+++..++..+.+.||+|+||.|++|........ .....||||.++..... .....+..|+.+|+.+ +||||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 3455566677888999999999999987753332 13578999999866443 4566778899999998 69999999
Q ss_pred eeeeecCceeEEEEEecCCCchhHHHHhCC-CCccCccchhhhhhhhhhhhhcCCccccc--cchhhhhhhHHHHHHHHH
Q 010140 155 YAEFEASHYSCLVMEYCPGGDLYAARQRQP-GKRFGISSAKFVFFLLFFFFYNNLGFVHT--DVTLFFNYRFYAAETLLA 231 (517)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~qi~~a 231 (517)
++++...+.+++|+|||..|+|..+++... ...+.. .|.... +.++..++..++.||+.|
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~-----------------~~~~~~~~~~L~~~dLlsfa~QIa~G 430 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDG-----------------SGVFPNERDALTTKDLLSFAYQIANG 430 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccc-----------------cCCCccccCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999998865 111110 011111 235566777899999999
Q ss_pred HHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccc
Q 010140 232 LEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVS 311 (517)
Q Consensus 232 L~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (517)
++||++.++|||||..+|||+..+..+||+|||+|+.........
T Consensus 431 Me~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~----------------------------------- 475 (609)
T KOG0200|consen 431 MEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYR----------------------------------- 475 (609)
T ss_pred HHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceE-----------------------------------
Confidence 999999999999999999999999999999999996433211110
Q ss_pred cccccccccccccccccccCCCCCCccccCCccccccccccCCcccCC--CCCcccchhhcCCCCCccchHHHHHHHHHH
Q 010140 312 HGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG--THEYLAPEVISGQGHGSAVDWWTLGVFLYE 389 (517)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~APE~l~~~~~~~~~DiWSlGvil~e 389 (517)
...-.| ...|||||.+....|+.++||||+||+|||
T Consensus 476 ------------------------------------------~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~E 513 (609)
T KOG0200|consen 476 ------------------------------------------TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWE 513 (609)
T ss_pred ------------------------------------------ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHH
Confidence 000112 235999999999889999999999999999
Q ss_pred Hhh-CCCCCCCCC-hHHHHHHHhcCCC-CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 390 MLY-GTTPFKGEN-NEKTLINILKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 390 llt-G~~Pf~~~~-~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
+++ |..||.+.. ..+.+..+..+.. ..|... ..++.++++.||+.+|++||++.+..+.+-.
T Consensus 514 ifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c---------~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 514 IFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHC---------SDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCC---------CHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 997 999999866 5566555555443 222221 2258999999999999999999854444444
No 397
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.8e-35 Score=331.85 Aligned_cols=240 Identities=19% Similarity=0.224 Sum_probs=177.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
.|...+.||+|+||.||+|+.+. .+..||||.+..... ....|+.++++++|||||++++++.+.+..
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIK-----NGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECC-----CCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 45667889999999999999876 578899999864321 112368889999999999999999999999
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH---hcCce
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH---MMGIV 241 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ii 241 (517)
|+||||+++|+|.+++.. +.+.. ...++.||+.||+||| +.+|+
T Consensus 759 ~lv~Ey~~~g~L~~~l~~-----l~~~~----------------------------~~~i~~~ia~~L~yLH~~~~~~ii 805 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN-----LSWER----------------------------RRKIAIGIAKALRFLHCRCSPAVV 805 (968)
T ss_pred EEEEeCCCCCcHHHHHhc-----CCHHH----------------------------HHHHHHHHHHHHHHhccCCCCCee
Confidence 999999999999998853 22211 2368899999999999 66999
Q ss_pred eccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 242 HrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||||||+||+++.++..++. ||......
T Consensus 806 H~dlkp~Nil~~~~~~~~~~-~~~~~~~~--------------------------------------------------- 833 (968)
T PLN00113 806 VGNLSPEKIIIDGKDEPHLR-LSLPGLLC--------------------------------------------------- 833 (968)
T ss_pred cCCCCHHhEEECCCCceEEE-eccccccc---------------------------------------------------
Confidence 99999999999988887775 55431100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
......||+.|||||++.+..++.++|||||||++|||++|+.||....
T Consensus 834 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~ 882 (968)
T PLN00113 834 -------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF 882 (968)
T ss_pred -------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc
Confidence 0012258899999999999889999999999999999999999986432
Q ss_pred h-----HHHHHHHhcCC----CCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 402 N-----EKTLINILKKP----LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 402 ~-----~~~~~~i~~~~----~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
. .+......... ...|..........++..++.+++.+||+.||++||++.
T Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ 942 (968)
T PLN00113 883 GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN 942 (968)
T ss_pred CCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHH
Confidence 1 11111111000 000111111111223445688999999999999999998
No 398
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=2.2e-35 Score=283.86 Aligned_cols=302 Identities=25% Similarity=0.350 Sum_probs=203.7
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecC
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEAS 161 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~ 161 (517)
.+.|.++.+||+|.|++||++.+... ....+.||+|.+... ....++..|+++|..+ .+.||+++.+++..+
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhh--ccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 46799999999999999999988763 225688999998654 3345577799999999 699999999999999
Q ss_pred ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
+.+++||||++..+..++..... ...++.|++.++.||.++|.+|||
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~l~---------------------------------~~~i~~Yl~~ll~Al~~~h~~GIv 154 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRSLS---------------------------------LAEIRWYLRNLLKALAHLHKNGIV 154 (418)
T ss_pred CeeEEEecccCccCHHHHHhcCC---------------------------------HHHHHHHHHHHHHHhhhhhccCcc
Confidence 99999999999988887765431 223468899999999999999999
Q ss_pred eccCCCCceEEcc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCC-----CCC-CCCcccccccccccc
Q 010140 242 YRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC-----ATP-MQPVLSCFSSVSHGK 314 (517)
Q Consensus 242 HrDLKp~NILl~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~ 314 (517)
||||||.|+|.+. .++-.|+|||+|...+. +.......+ ..+ ++....+.+-.+...
T Consensus 155 HRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~----------------~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~ 218 (418)
T KOG1167|consen 155 HRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG----------------YQQTEHSRSYSGRHATPAMGKDVHCQSVATASK 218 (418)
T ss_pred ccCCCccccccccccCCceEEechhHHHHHh----------------hhhhhhhhhhhcccCCccccCcccccccccccC
Confidence 9999999999984 56789999999943111 000000000 000 111111110000000
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-CCccchHHHHHHHHHHHhhC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG 393 (517)
...... ..............||++|+|||++...+ .++++||||.|||+.-++++
T Consensus 219 p~g~~~------------------------~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~ 274 (418)
T KOG1167|consen 219 PAGYYR------------------------RCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSR 274 (418)
T ss_pred CCCcee------------------------ccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcc
Confidence 000000 00111122344568999999999998765 68999999999999999999
Q ss_pred CCCCCCCCh-HHHHHHHh--------------cCC------CCCC----------CC----CCC------CchhH-Hh-h
Q 010140 394 TTPFKGENN-EKTLINIL--------------KKP------LTFP----------RI----GVS------SSKEF-EE-V 430 (517)
Q Consensus 394 ~~Pf~~~~~-~~~~~~i~--------------~~~------~~~p----------~~----~~~------~~~~~-~~-~ 430 (517)
..||....+ ...+..|. .+. ..++ .. ... ....+ +. +
T Consensus 275 ~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~ 354 (418)
T KOG1167|consen 275 RYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFP 354 (418)
T ss_pred ccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccccccc
Confidence 999875322 22222111 011 0000 00 000 00011 11 1
Q ss_pred hhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 431 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 431 ~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
..+.||+.+||+.||.+|+|++ ++|+||||...+
T Consensus 355 ~~~~dlLdk~le~np~kRitAE----eALkHpFF~~~~ 388 (418)
T KOG1167|consen 355 ALLLDLLDKCLELNPQKRITAE----DALKHPFFDEAD 388 (418)
T ss_pred HHHHHHHHHHccCChhhcccHH----HHhcCcCCcchh
Confidence 2578999999999999999998 999999999544
No 399
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=293.63 Aligned_cols=253 Identities=22% Similarity=0.223 Sum_probs=197.1
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
..+..++||+|+||+||+|.+.-. .+.-+.+||||++..... .+....+..|+.+|..++|||+++|++++.... +
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecC-CceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-H
Confidence 345678999999999999998754 233567899999875532 244556777999999999999999999998766 8
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
.||++|+++|.|.++++.++. .+.... +..|..||++|+.|||+++++|||
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~-~igsq~----------------------------lLnw~~QIAkgM~YLe~qrlVHrd 823 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRD-NIGSQD----------------------------LLNWCYQIAKGMKYLEEQRLVHRD 823 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhc-cccHHH----------------------------HHHHHHHHHHHHHHHHhcchhhhh
Confidence 899999999999999987532 222211 236889999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVT 324 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (517)
|..+|||+....++||.|||+++.........
T Consensus 824 LaaRNVLVksP~hvkitdfgla~ll~~d~~ey------------------------------------------------ 855 (1177)
T KOG1025|consen 824 LAARNVLVKSPNHVKITDFGLAKLLAPDEKEY------------------------------------------------ 855 (1177)
T ss_pred hhhhheeecCCCeEEEEecchhhccCcccccc------------------------------------------------
Confidence 99999999999999999999996544322111
Q ss_pred ccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCCCCCCChH
Q 010140 325 TIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNE 403 (517)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~ 403 (517)
......-.+.|||-|.+....|+.++||||+||++||++| |..||.+....
T Consensus 856 ----------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 856 ----------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred ----------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 0111123567999999999999999999999999999997 99999998877
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCC
Q 010140 404 KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454 (517)
Q Consensus 404 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~ 454 (517)
++-..+..+.. .+....- ..++.-++.+||..|+..||++.+.
T Consensus 908 eI~dlle~geR-LsqPpiC-------tiDVy~~mvkCwmid~~~rp~fkel 950 (1177)
T KOG1025|consen 908 EIPDLLEKGER-LSQPPIC-------TIDVYMVMVKCWMIDADSRPTFKEL 950 (1177)
T ss_pred HhhHHHhcccc-CCCCCCc-------cHHHHHHHHHHhccCcccCccHHHH
Confidence 76554444332 3222221 2258899999999999999999633
No 400
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-32 Score=258.98 Aligned_cols=266 Identities=19% Similarity=0.168 Sum_probs=204.5
Q ss_pred CCcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 79 ~~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
..+...++++...+-+|.||.||.|.++....-...+.|-+|.++.... ..++..+..|.-++..+.|||+..+.++.
T Consensus 279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS--~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS--QIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc--HHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3444567889999999999999999888655444556677888866543 35567778888889999999999999977
Q ss_pred e-cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 159 E-ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 159 ~-~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
. +....+.++.+..-|+|..++...++....-.+.. .-.++-.++.|++.|++|||+
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtv----------------------tt~qlV~masQla~am~hlh~ 414 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTV----------------------TTIQLVLMASQLAMAMEHLHN 414 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccch----------------------hHHHHHHHHHHHHHHHHHHHh
Confidence 4 55677889999988999999985433222221111 112234689999999999999
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
+||||.||..+|++|++.-+|||+|=.+++.+-.
T Consensus 415 ~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP---------------------------------------------- 448 (563)
T KOG1024|consen 415 HGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP---------------------------------------------- 448 (563)
T ss_pred cCcccchhhhhcceehhheeEEeccchhccccCc----------------------------------------------
Confidence 9999999999999999999999999998854321
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhh-CCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTP 396 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~P 396 (517)
.|..++.+.+ -....||+||.+....|+.++|+|||||+||||+| |+.|
T Consensus 449 -----------------~DYhcLGDnE-------------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~P 498 (563)
T KOG1024|consen 449 -----------------GDYHCLGDNE-------------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLP 498 (563)
T ss_pred -----------------ccccccCCCC-------------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCC
Confidence 1111222111 13457999999999999999999999999999997 9999
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
|...++.++...+.++...-.+.. ++.++..++..||..+|++||+.+
T Consensus 499 yaeIDPfEm~~ylkdGyRlaQP~N--------CPDeLf~vMacCWallpeeRPsf~ 546 (563)
T KOG1024|consen 499 YAEIDPFEMEHYLKDGYRLAQPFN--------CPDELFTVMACCWALLPEERPSFS 546 (563)
T ss_pred ccccCHHHHHHHHhccceecCCCC--------CcHHHHHHHHHHHhcCcccCCCHH
Confidence 999999998887776643322222 223699999999999999999996
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-32 Score=245.36 Aligned_cols=240 Identities=26% Similarity=0.355 Sum_probs=178.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceee-eeec
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYA-EFEA 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~-~~~~ 160 (517)
.+.|.|.+.||+|.||.+.+|++++ ++..+++|.+.+... ....|.+|...--.| .|.||+.-|+ .|+.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~-----s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt 93 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQ-----SKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQT 93 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccC-----CceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhc
Confidence 3689999999999999999999998 778899999987753 345666677655555 5999998887 6788
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
.+.++++||||+.|||..-+.. .++++... +.++.|+++||.|||++++
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~---~GigE~~~----------------------------K~v~~ql~SAi~fMHsknl 142 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEA---AGIGEANT----------------------------KKVFAQLLSAIEFMHSKNL 142 (378)
T ss_pred CceEEEeeccCccchhhhhcCc---ccccHHHH----------------------------HHHHHHHHHHHHHhhccch
Confidence 8899999999999999875544 23333333 4678999999999999999
Q ss_pred eeccCCCCceEEc--cCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 241 VYRDLKPENVLVR--EDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 241 iHrDLKp~NILl~--~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
||||||.+||||- +..+|||||||+.++.+..-
T Consensus 143 VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV--------------------------------------------- 177 (378)
T KOG1345|consen 143 VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV--------------------------------------------- 177 (378)
T ss_pred hhcccccceEEEecCCccEEEeeecccccccCcee---------------------------------------------
Confidence 9999999999994 33489999999975432110
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-----CCccchHHHHHHHHHHHhhC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-----HGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-----~~~~~DiWSlGvil~elltG 393 (517)
...--+..|.+||.+.... ..+.+|||.||+++|.+++|
T Consensus 178 ------------------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG 221 (378)
T KOG1345|consen 178 ------------------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTG 221 (378)
T ss_pred ------------------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecC
Confidence 0112355689999875432 37789999999999999999
Q ss_pred CCCCCCCCh----HHHHHHHhcC-CCCCCCCCCCCchhHHhhhhHHHHHHHhccCCccccc
Q 010140 394 TTPFKGENN----EKTLINILKK-PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449 (517)
Q Consensus 394 ~~Pf~~~~~----~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~ 449 (517)
.+||..... .-.+.+..++ ....|..-.+..+ .+..+.++-|..++++|-
T Consensus 222 ~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~------~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 222 KFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSE------KALRLFKKSLTPRFKDRC 276 (378)
T ss_pred CCcchhhhccCchHHHHHHHhcccCccCchhhcccCH------HHHHHHHHhcCCcccccc
Confidence 999984322 2223333332 2334443333333 478999999999999993
No 402
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.8e-33 Score=278.52 Aligned_cols=263 Identities=40% Similarity=0.696 Sum_probs=214.5
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCceeEEEEE
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYSCLVME 169 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV~E 169 (517)
.+|+|+||.|++++..... ..+..||+|+.++.....+... +...|..++...+ ||.+|++...|+.+..++++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~--da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld 77 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGA--DAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILD 77 (612)
T ss_pred CCCcCCCcchHHHHHhccc--cccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhh
Confidence 3799999999998755432 2678899999987765544433 5556888898886 9999999999999999999999
Q ss_pred ecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCc
Q 010140 170 YCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPEN 249 (517)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 249 (517)
+..||+|...+.... ...+...+.+...++.|++++|+.+|+|||+|++|
T Consensus 78 ~~rgg~lft~l~~~~------------------------------~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~en 127 (612)
T KOG0603|consen 78 FLRGGDLFTRLSKEV------------------------------MFDELDVAFYLAELALALDHLHKLGIAYRDYKLEN 127 (612)
T ss_pred hcccchhhhccccCC------------------------------chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccc
Confidence 999999987654421 11222335778899999999999999999999999
Q ss_pred eEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 010140 250 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 329 (517)
Q Consensus 250 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (517)
|+++.+|++++.|||+++..-.
T Consensus 128 illd~~Ghi~~tdfglske~v~---------------------------------------------------------- 149 (612)
T KOG0603|consen 128 VLLLLEGHIKLTDFGLSKEAVK---------------------------------------------------------- 149 (612)
T ss_pred eeecccCccccCCchhhhHhHh----------------------------------------------------------
Confidence 9999999999999999843210
Q ss_pred cCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 010140 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i 409 (517)
. ...|||..|||||++. ++..++|+||+|+++|||++|..||.+ +.+..|
T Consensus 150 ----------------------~--~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~I 199 (612)
T KOG0603|consen 150 ----------------------E--KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRI 199 (612)
T ss_pred ----------------------h--hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHH
Confidence 0 0117999999999998 578899999999999999999999988 778888
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC-CChHHhhcCCCcCCCCcccc--cCCCCCCCCCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNN 483 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~-~~~~ell~hp~f~~~~~~~~--~~~~p~~~~~~ 483 (517)
.+....+|..... .+++++..|+..+|.+|.... ..+.|+++|+||..++|+.+ +...||+.|..
T Consensus 200 l~~~~~~p~~l~~---------~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~ 267 (612)
T KOG0603|consen 200 LKAELEMPRELSA---------EARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGS 267 (612)
T ss_pred hhhccCCchhhhH---------HHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcc
Confidence 8877777754433 489999999999999999985 57889999999999999955 55667766653
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.1e-29 Score=236.08 Aligned_cols=213 Identities=39% Similarity=0.593 Sum_probs=174.9
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEec
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 171 (517)
||+|++|.||+|.... .++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++|||+
T Consensus 1 l~~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKK-----TGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecC-----CCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence 6899999999999875 56889999998664321 3456777999999999999999999999999999999999
Q ss_pred CCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceE
Q 010140 172 PGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVL 251 (517)
Q Consensus 172 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 251 (517)
+|++|.+++.... ..+... ....++.+++.+|.+||++|++|+||+|.||+
T Consensus 74 ~~~~l~~~~~~~~-~~~~~~----------------------------~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~ 124 (215)
T cd00180 74 EGGSLKDLLKENE-GKLSED----------------------------EILRILLQILEGLEYLHSNGIIHRDLKPENIL 124 (215)
T ss_pred CCCcHHHHHHhcc-CCCCHH----------------------------HHHHHHHHHHHHHHHHHhCCeeccCCCHhhEE
Confidence 9999999887642 112211 12367899999999999999999999999999
Q ss_pred Ecc-CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 010140 252 VRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 330 (517)
Q Consensus 252 l~~-~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (517)
++. ++.++|+|||.+........
T Consensus 125 ~~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------------------- 148 (215)
T cd00180 125 LDSDNGKVKLADFGLSKLLTSDKS-------------------------------------------------------- 148 (215)
T ss_pred EeCCCCcEEEecCCceEEccCCcc--------------------------------------------------------
Confidence 999 89999999998743221000
Q ss_pred CCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 010140 331 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409 (517)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i 409 (517)
......+...|++||.+... .++.+.|+|++|+++++|
T Consensus 149 ----------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------- 187 (215)
T cd00180 149 ----------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------- 187 (215)
T ss_pred ----------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------
Confidence 01223578889999999887 788999999999999999
Q ss_pred hcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCC
Q 010140 410 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462 (517)
Q Consensus 410 ~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp 462 (517)
..+.+++.+||..||.+||++. ++++|+
T Consensus 188 ---------------------~~~~~~l~~~l~~~p~~R~~~~----~l~~~~ 215 (215)
T cd00180 188 ---------------------PELKDLIRKMLQKDPEKRPSAK----EILEHL 215 (215)
T ss_pred ---------------------HHHHHHHHHHhhCCcccCcCHH----HHhhCC
Confidence 1389999999999999999997 888874
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=2.4e-31 Score=296.04 Aligned_cols=236 Identities=17% Similarity=0.184 Sum_probs=149.9
Q ss_pred hcCC-CCccceeeee-------ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccch
Q 010140 145 MLDH-PFLPTLYAEF-------EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVT 216 (517)
Q Consensus 145 ~l~H-pnIv~l~~~~-------~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 216 (517)
.++| +||++++++| .....++++|||+ +++|.+++.... ..++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-~~~~~~~------------------------ 81 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-RSVDAFE------------------------ 81 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-ccccHHH------------------------
Confidence 3445 5888888888 2335678899988 779999986431 2233322
Q ss_pred hhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCC
Q 010140 217 LFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC 296 (517)
Q Consensus 217 ~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (517)
++.|++||+.||+|||++|||||||||+||||+..|.+|++|||++...........
T Consensus 82 ----~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~------------------- 138 (793)
T PLN00181 82 ----CFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATT------------------- 138 (793)
T ss_pred ----HHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcc-------------------
Confidence 247889999999999999999999999999999888999999988743211000000
Q ss_pred CCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCc
Q 010140 297 ATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGS 376 (517)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~ 376 (517)
+..++...+.............. .....+........+||+.|||||++.+..|+.
T Consensus 139 ----------------------ki~DfG~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~ 194 (793)
T PLN00181 139 ----------------------KSREIGSSRREEILSERRIEKLE--EVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNC 194 (793)
T ss_pred ----------------------cccccccccccccccccchhhhh--ccccCCCcccccccCCCcceEChhhhccCCCCc
Confidence 00000000000000000000000 000000011123357999999999999999999
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChH
Q 010140 377 AVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV 456 (517)
Q Consensus 377 ~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ 456 (517)
++|||||||+||||++|.+|+.... ..+..+.... .|... ........+++.+||+.||.+||++.
T Consensus 195 ~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~L~~~P~~Rps~~---- 260 (793)
T PLN00181 195 ASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV--LPPQI------LLNWPKEASFCLWLLHPEPSCRPSMS---- 260 (793)
T ss_pred hhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh--cChhh------hhcCHHHHHHHHHhCCCChhhCcChH----
Confidence 9999999999999999999876432 1222222111 11110 01122467899999999999999998
Q ss_pred HhhcCCCcCCC
Q 010140 457 EIKRHEFFKGI 467 (517)
Q Consensus 457 ell~hp~f~~~ 467 (517)
|+++||||...
T Consensus 261 eil~h~~~~~~ 271 (793)
T PLN00181 261 ELLQSEFINEP 271 (793)
T ss_pred HHhhchhhhhh
Confidence 99999999763
No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=1.8e-29 Score=238.07 Aligned_cols=215 Identities=42% Similarity=0.639 Sum_probs=171.9
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
|.+.+.||.|++|.||+|...+ +++.+|+|.+...... .....+..|+..++.++|+||+++++++......+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKG-----TGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcC-----CCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceE
Confidence 6788999999999999999876 5678999999865432 24566777999999999999999999999999999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+++||+++++|.+++...... +... ....++.|++.+|.|||+++++|+||
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~~-~~~~----------------------------~~~~~~~~l~~~l~~lh~~~i~h~di 124 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGGK-LSEE----------------------------EARFYLRQILEALEYLHSLGIVHRDL 124 (225)
T ss_pred EEEeccCCCCHHHHHHhcccC-CCHH----------------------------HHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 999999999999988764321 1111 12367889999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccccc
Q 010140 246 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 325 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (517)
+|.||+++.++.++|+|||++.......
T Consensus 125 ~~~ni~v~~~~~~~l~d~g~~~~~~~~~---------------------------------------------------- 152 (225)
T smart00221 125 KPENILLGMDGLVKLADFGLARFIHRDL---------------------------------------------------- 152 (225)
T ss_pred CHHHEEEcCCCCEEEeeCceeeEecCcc----------------------------------------------------
Confidence 9999999999999999999874332100
Q ss_pred cccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhh-cCCCCCccchHHHHHHHHHHHhhCCCCCCC-CChH
Q 010140 326 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVI-SGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-ENNE 403 (517)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l-~~~~~~~~~DiWSlGvil~elltG~~Pf~~-~~~~ 403 (517)
........++..|++||.+ ....++.++|||+||+++|+|++|+.||.. .+..
T Consensus 153 -------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~ 207 (225)
T smart00221 153 -------------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT 207 (225)
T ss_pred -------------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence 0011233578889999999 666678899999999999999999999987 4444
Q ss_pred -HHHHHHhcCC
Q 010140 404 -KTLINILKKP 413 (517)
Q Consensus 404 -~~~~~i~~~~ 413 (517)
.+...+..+.
T Consensus 208 ~~~~~~~~~~~ 218 (225)
T smart00221 208 SLLSDVWSFGV 218 (225)
T ss_pred HHHHHHHhcCC
Confidence 5555555554
No 406
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.96 E-value=1.9e-30 Score=273.85 Aligned_cols=254 Identities=36% Similarity=0.643 Sum_probs=192.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
-++|..++.|..|+||.||+++++. +.+.+|+|+- ++.+..++ ||.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~-----trqrfa~kiN-kq~lilRn----------ilt~a~npfvv---------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKE-----TRQRFAMKIN-KQNLILRN----------ILTFAGNPFVV---------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccc-----cccchhhccc-ccchhhhc----------cccccCCccee----------
Confidence 4789999999999999999999987 6788999554 33222111 44445555555
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
||-...++..+ .++ .+++.+++|||+.||+|
T Consensus 136 -----------gDc~tllk~~g--~lP------------------------------------vdmvla~Eylh~ygivh 166 (1205)
T KOG0606|consen 136 -----------GDCATLLKNIG--PLP------------------------------------VDMVLAVEYLHSYGIVH 166 (1205)
T ss_pred -----------chhhhhcccCC--CCc------------------------------------chhhHHhHhhccCCeec
Confidence 34333332211 111 35588999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCccccccccc-ccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPK-LLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 321 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (517)
||+||+|.+|+.-|++|++|||+++.....-. .+..
T Consensus 167 rdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e------------------------------------------- 203 (1205)
T KOG0606|consen 167 RDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE------------------------------------------- 203 (1205)
T ss_pred CCCCCCcceeeecccccccchhhhhhhhhhccchhhh-------------------------------------------
Confidence 99999999999999999999999854321000 0000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 322 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
...............+|||.|.|||++..+.|+..+|+|++|+|+||.+.|..||.+++
T Consensus 204 ---------------------g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 204 ---------------------GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred ---------------------cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 00000001122345689999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCCCCC
Q 010140 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVP 481 (517)
Q Consensus 402 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~~~~ 481 (517)
+++++..++.....+|........ +++++|.++|+.+|..|.... .+-++++|+||+..||.-+-+++.+++|
T Consensus 263 peelfg~visd~i~wpE~dea~p~------Ea~dli~~LL~qnp~~Rlgt~-ga~evk~h~ff~~LDw~~llRqkaefvp 335 (1205)
T KOG0606|consen 263 PEELFGQVISDDIEWPEEDEALPP------EAQDLIEQLLRQNPLCRLGTG-GALEVKQHGFFQLLDWKSLLRQKAEFVP 335 (1205)
T ss_pred HHHHHhhhhhhhccccccCcCCCH------HHHHHHHHHHHhChHhhcccc-hhhhhhhccceeecccchhhhhhccccc
Confidence 999999999999999887666555 499999999999999999885 6669999999999999966555555544
Q ss_pred C
Q 010140 482 N 482 (517)
Q Consensus 482 ~ 482 (517)
.
T Consensus 336 q 336 (1205)
T KOG0606|consen 336 Q 336 (1205)
T ss_pred c
Confidence 3
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.4e-29 Score=268.20 Aligned_cols=274 Identities=26% Similarity=0.343 Sum_probs=191.9
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEE
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCL 166 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 166 (517)
.....+|.|++|.|+.+...........+.+++| ... ....+.....+..|..+-..+.||||+..+..+.+....+-
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~-~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKP-TESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQ 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCC-cccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchh
Confidence 5678899999998888877753322223333333 111 11222223336668888888999999988887777666666
Q ss_pred EEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCC
Q 010140 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLK 246 (517)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 246 (517)
+||||++ ||+.++... ..+...++ ..++.||+.||+|||+.||.|||||
T Consensus 399 ~mE~~~~-Dlf~~~~~~--~~~~~~e~----------------------------~c~fKqL~~Gv~y~h~~GiahrdlK 447 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSN--GKLTPLEA----------------------------DCFFKQLLRGVKYLHSMGLAHRDLK 447 (601)
T ss_pred hhhcccH-HHHHHHhcc--cccchhhh----------------------------hHHHHHHHHHHHHHHhcCceeccCc
Confidence 6999999 999988764 12222222 3577999999999999999999999
Q ss_pred CCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccccccc
Q 010140 247 PENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTI 326 (517)
Q Consensus 247 p~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (517)
|+|++++.+|.+||+|||.+..+...
T Consensus 448 ~enll~~~~g~lki~Dfg~~~vf~~~------------------------------------------------------ 473 (601)
T KOG0590|consen 448 LENLLVTENGILKIIDFGAASVFRYP------------------------------------------------------ 473 (601)
T ss_pred cccEEEecCCceEEeecCcceeeccC------------------------------------------------------
Confidence 99999999999999999987332210
Q ss_pred ccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCc-cchHHHHHHHHHHHhhCCCCCCCCChHHH
Q 010140 327 REQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGS-AVDWWTLGVFLYEMLYGTTPFKGENNEKT 405 (517)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~-~~DiWSlGvil~elltG~~Pf~~~~~~~~ 405 (517)
.+........++|+..|+|||++.+..|.+ ..||||.|++++.|++|+.||......+.
T Consensus 474 --------------------~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 474 --------------------WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN 533 (601)
T ss_pred --------------------cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence 000012345678999999999999999855 78999999999999999999986544332
Q ss_pred HH-HHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccc
Q 010140 406 LI-NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472 (517)
Q Consensus 406 ~~-~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~ 472 (517)
.. .... ...+........-.-..+...+.+|.+||+.||.+|.|++ +|++.+||+.++-+.+
T Consensus 534 ~~~~~~~-~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~----~i~~d~W~~~i~~c~v 596 (601)
T KOG0590|consen 534 SFKTNNY-SDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIE----QILNDEWIRSIECCHV 596 (601)
T ss_pred chhhhcc-ccccccccChHHHHHhchhhHHHHHHHHccCChhheecHH----HHhhChHhhhcceEEe
Confidence 21 1111 0000000101100111223578999999999999999998 9999999999876544
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=6.9e-28 Score=219.09 Aligned_cols=149 Identities=23% Similarity=0.198 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCC
Q 010140 222 RFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQ 301 (517)
Q Consensus 222 ~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (517)
+.|+.||+.||+|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 20 ~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~------------------------------ 61 (176)
T smart00750 20 WAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP------------------------------ 61 (176)
T ss_pred HHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc------------------------------
Confidence 378899999999999999 999999999999999 998732210
Q ss_pred CccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHH
Q 010140 302 PVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWW 381 (517)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiW 381 (517)
....||+.|||||++.+..++.++|||
T Consensus 62 -----------------------------------------------------~~~~g~~~y~aPE~~~~~~~~~~~Diw 88 (176)
T smart00750 62 -----------------------------------------------------EQSRVDPYFMAPEVIQGQSYTEKADIY 88 (176)
T ss_pred -----------------------------------------------------ccCCCcccccChHHhcCCCCcchhhHH
Confidence 011588999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhc
Q 010140 382 TLGVFLYEMLYGTTPFKGENNE-KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460 (517)
Q Consensus 382 SlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~ 460 (517)
||||++|||++|+.||...... ..+..+......................++.++|.+||..||.+||++. |+++
T Consensus 89 SlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~----~ll~ 164 (176)
T smart00750 89 SLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAAN----HYLA 164 (176)
T ss_pred HHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHH----HHHH
Confidence 9999999999999999765442 3333333322221111111111111112589999999999999999998 9999
Q ss_pred CCCcC
Q 010140 461 HEFFK 465 (517)
Q Consensus 461 hp~f~ 465 (517)
|+|+.
T Consensus 165 ~~~~~ 169 (176)
T smart00750 165 HCRAL 169 (176)
T ss_pred HHHHH
Confidence 99875
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=7.3e-27 Score=232.60 Aligned_cols=145 Identities=23% Similarity=0.148 Sum_probs=113.1
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHH--HHHHHHhHHHHHHHHHHhcCCCCccc-eee
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPT-LYA 156 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~-l~~ 156 (517)
+...++|.+.+.||+|+||+||+|+++.. ++..+|||++..... ........+.+|+.+|+.++|+||+. +++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~ 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGD----PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCC----CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence 34567899999999999999999987642 356689998653211 11223456788999999999999985 443
Q ss_pred eeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH
Q 010140 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH 236 (517)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 236 (517)
. +..|||||||+|++|... ... . . ..++.|++.||.|||
T Consensus 90 ~----~~~~LVmE~~~G~~L~~~-~~~--~-----~-----------------------------~~~~~~i~~aL~~lH 128 (365)
T PRK09188 90 T----GKDGLVRGWTEGVPLHLA-RPH--G-----D-----------------------------PAWFRSAHRALRDLH 128 (365)
T ss_pred c----CCcEEEEEccCCCCHHHh-Ccc--c-----h-----------------------------HHHHHHHHHHHHHHH
Confidence 2 457999999999999621 100 0 0 145689999999999
Q ss_pred hcCceeccC-CCCceEEccCCcEEeccCCCcccc
Q 010140 237 MMGIVYRDL-KPENVLVREDGHIMLSDFDLSFKC 269 (517)
Q Consensus 237 ~~~iiHrDL-Kp~NILl~~~~~vkL~DFGls~~~ 269 (517)
++||+|||| ||+|||++.++.+||+|||+|+.+
T Consensus 129 ~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 129 RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred HCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 999999999 999999999999999999999654
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=3e-25 Score=220.44 Aligned_cols=268 Identities=38% Similarity=0.536 Sum_probs=198.1
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC-CccceeeeeecCcee
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP-FLPTLYAEFEASHYS 164 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp-nIv~l~~~~~~~~~~ 164 (517)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+.|+ +|+++++.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEE
Confidence 788999999999999999876 56899999877554333567778899999999988 799999999888889
Q ss_pred EEEEEecCCCchhHHHHhCCCC-ccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceec
Q 010140 165 CLVMEYCPGGDLYAARQRQPGK-RFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYR 243 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHr 243 (517)
+++++++.+++|.+++...... .+. ......++.|++.+|.|+|+.+++||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~l~~~H~~~~~hr 125 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLS----------------------------ESEALFILAQILSALEYLHSKGIIHR 125 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCC----------------------------HHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 9999999999999666543211 111 12234788999999999999999999
Q ss_pred cCCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 244 DLKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 244 DLKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
||||+||+++..+ .++++|||+++.........
T Consensus 126 d~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------------------- 159 (384)
T COG0515 126 DIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS---------------------------------------------- 159 (384)
T ss_pred CCCHHHeeecCCCCeEEEeccCcceecCCCCccc----------------------------------------------
Confidence 9999999999988 79999999984222100000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcC---CCCCccchHHHHHHHHHHHhhCCCCCCC
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKG 399 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~---~~~~~~~DiWSlGvil~elltG~~Pf~~ 399 (517)
.........+||..|+|||.+.+ ..+....|+||+|++++++++|..||..
T Consensus 160 --------------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~ 213 (384)
T COG0515 160 --------------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213 (384)
T ss_pred --------------------------cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 00012345679999999999998 5689999999999999999999999887
Q ss_pred CCh----HHHHHHHhcCCCC-CCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 400 ENN----EKTLINILKKPLT-FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 400 ~~~----~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
... ......+...... .......... ......+.+++.+++..+|..|.+.. +...++|...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~~~~~~~~ 280 (384)
T COG0515 214 EKNSSATSQTLKIILELPTPSLASPLSPSNP-ELISKAASDLLKKLLAKDPKNRLSSS----SDLSHDLLAH 280 (384)
T ss_pred CCccccHHHHHHHHHhcCCcccccccCcccc-chhhHHHHHHHHHHHhcCchhcCCHH----HHhhchHhhC
Confidence 764 3444444433322 1111111100 01112478999999999999999987 6666655543
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-26 Score=214.31 Aligned_cols=219 Identities=23% Similarity=0.360 Sum_probs=176.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 162 (517)
-.|+++++||+|+||++++|+..- .++.||||.-... ....++..|.+..+.| ..++|...|.+...+.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~-----nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~ 97 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLY-----NNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK 97 (449)
T ss_pred ccceeccccccCcceeeecccccc-----cCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccc
Confidence 369999999999999999998775 6899999987654 2334555588888887 5799999999989999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
+-.||||++ |.+|.+++.-.. ++|....+. .++.|++.-++|+|++.+|.
T Consensus 98 ~NiLVidLL-GPSLEDLFD~Cg-R~FSvKTV~----------------------------miA~Qmi~rie~vH~k~LIY 147 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLFDLCG-RRFSVKTVA----------------------------MIAKQMITRIEYVHEKDLIY 147 (449)
T ss_pred hhhhhhhhh-CcCHHHHHHHhc-CcccHHhHH----------------------------HHHHHHHHHHHHHHhcceee
Confidence 999999999 999999887653 455554443 67899999999999999999
Q ss_pred ccCCCCceEEccCC-----cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccc
Q 010140 243 RDLKPENVLVREDG-----HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 317 (517)
Q Consensus 243 rDLKp~NILl~~~~-----~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
|||||+|+||...+ .+.|+|||+|+.+.+....
T Consensus 148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk------------------------------------------ 185 (449)
T KOG1165|consen 148 RDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK------------------------------------------ 185 (449)
T ss_pred cccCccceeecCCCCCCCceEEEEeccchhhhcCcccc------------------------------------------
Confidence 99999999997544 5899999999765432211
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCC
Q 010140 318 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397 (517)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf 397 (517)
.........+..||..||+-....|...+..-|+=|||-++++.|-|..||
T Consensus 186 -----------------------------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPW 236 (449)
T KOG1165|consen 186 -----------------------------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 236 (449)
T ss_pred -----------------------------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcc
Confidence 111233445677999999999999999999999999999999999999999
Q ss_pred CCC---ChHHHHHHHhcCC
Q 010140 398 KGE---NNEKTLINILKKP 413 (517)
Q Consensus 398 ~~~---~~~~~~~~i~~~~ 413 (517)
.|. +..+.+++|-...
T Consensus 237 QGLKA~tnK~kYeKIGe~K 255 (449)
T KOG1165|consen 237 QGLKADTNKEKYEKIGETK 255 (449)
T ss_pred ccccCcchHHHHHHhcccc
Confidence 875 4456667765443
No 412
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-25 Score=223.97 Aligned_cols=258 Identities=25% Similarity=0.338 Sum_probs=185.6
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCC----CCccceeeee-e
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH----PFLPTLYAEF-E 159 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H----pnIv~l~~~~-~ 159 (517)
+|.+.++||+|+||.||+|.+.... ...+|+|+....... ....+..|+.+|..+.. +++..+++.+ .
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~---~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~ 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGS---KPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS 91 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC----CeeEEEEEEEecccC---CCccchhHHHHHHHHhhhcCCCCCCEEEEeccC
Confidence 8999999999999999999987631 467999998754211 11145568999988863 6899999999 5
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
.+.+.|+||+.+ |.+|.++....+.+.++...+. .++.|++.+|++||+.|
T Consensus 92 ~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l----------------------------~ia~q~l~~l~~lH~~G 142 (322)
T KOG1164|consen 92 TEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVL----------------------------RIAIQNLNALEDLHSKG 142 (322)
T ss_pred CCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHH----------------------------HHHHHHHHHHHHHHhcC
Confidence 888999999999 9999998877655555555444 67899999999999999
Q ss_pred ceeccCCCCceEEccC-----CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 240 IVYRDLKPENVLVRED-----GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 240 iiHrDLKp~NILl~~~-----~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
+|||||||+|+++... ..+.|.|||+++.+.......
T Consensus 143 ~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~-------------------------------------- 184 (322)
T KOG1164|consen 143 FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSG-------------------------------------- 184 (322)
T ss_pred cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCC--------------------------------------
Confidence 9999999999999754 369999999996322110000
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCC
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGT 394 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~ 394 (517)
.. ..+.......+.||..|+++.+..+...+.+.|+||++.++.+|+.|.
T Consensus 185 -----------------------------~~-~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 185 -----------------------------GN-LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred -----------------------------cc-cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 00 000001123457999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCCCCCCC--CCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 395 TPFKGENNEKTLINILKKPLTFPR--IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 395 ~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
.||.+........+.......... ...... ..+.++...+-..+...+|...
T Consensus 235 LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 235 LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKP------EEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred CCCccccccchHHHHHHHhhhhccccccCCCh------HHHHHHHHHhhccCCcCCCCHH
Confidence 999876643333322221111111 011111 1356666666667888888774
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-26 Score=204.69 Aligned_cols=225 Identities=22% Similarity=0.327 Sum_probs=176.1
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFE 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~ 159 (517)
+..+.|.++++||+|+||.+|+|.... .+..||||+-... ....++..|..+.+.|+ ...|..+..++.
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~-----~ge~VAiK~Es~~-----a~hpqL~yEskvY~iL~~g~GiP~i~~y~~ 81 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISIT-----SGEEVAIKLESSK-----AKHPQLLYESKVYRILQGGVGIPHIRHYGT 81 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeecc-----CCceEEEEeeccc-----CCCcchhHHHHHHHHhccCCCCchhhhhcc
Confidence 456889999999999999999999887 7889999997654 33455667999999986 467888888889
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
+..+-.|||+++ |.+|.+++.-.. .++....+ ..++-|++.-|+|+|.++
T Consensus 82 e~~ynvlVMdLL-GPsLEdLfnfC~-R~ftmkTv----------------------------LMLaDQml~RiEyvH~r~ 131 (341)
T KOG1163|consen 82 EKDYNVLVMDLL-GPSLEDLFNFCS-RRFTMKTV----------------------------LMLADQMLSRIEYVHLRN 131 (341)
T ss_pred ccccceeeeecc-CccHHHHHHHHh-hhhhHHhH----------------------------HHHHHHHHHHHHHHHhhc
Confidence 999999999999 999998876432 23333222 256789999999999999
Q ss_pred ceeccCCCCceEEcc---CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 240 IVYRDLKPENVLVRE---DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 240 iiHrDLKp~NILl~~---~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
+|||||||+|+|..- ...+.|+|||+|+++.+....
T Consensus 132 fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~----------------------------------------- 170 (341)
T KOG1163|consen 132 FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR----------------------------------------- 170 (341)
T ss_pred cccccCCccceeeccccccceEEEEeccchhhhcccccc-----------------------------------------
Confidence 999999999999863 347999999999776532211
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
............||..|.+-....+...+..-|+=|+|.+|..+.-|..|
T Consensus 171 ------------------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LP 220 (341)
T KOG1163|consen 171 ------------------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLP 220 (341)
T ss_pred ------------------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCc
Confidence 01112334566899999999988888888999999999999999999999
Q ss_pred CCCCCh---HHHHHHHhcCCCCC
Q 010140 397 FKGENN---EKTLINILKKPLTF 416 (517)
Q Consensus 397 f~~~~~---~~~~~~i~~~~~~~ 416 (517)
|.+... .+.+.+|.+.....
T Consensus 221 WQglka~tk~QKyEkI~EkK~s~ 243 (341)
T KOG1163|consen 221 WQGLKAATKKQKYEKISEKKMST 243 (341)
T ss_pred ccccchhhHHHHHHHHHHhhcCC
Confidence 998654 34556666554443
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.91 E-value=1.5e-24 Score=201.17 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=112.6
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhH------HHHHHHHHHhcCCCCcccee
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR------ADMEKVILTMLDHPFLPTLY 155 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~------~~~E~~il~~l~HpnIv~l~ 155 (517)
..++|++++.||.|+||.||++... +..+|||++............+ +.+|+..+.++.||+|..+.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~-------~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~ 101 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTD-------YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLN 101 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecC-------CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcce
Confidence 3578999999999999999996542 3469999997665443343334 57899999999999999999
Q ss_pred eeeecC--------ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHH
Q 010140 156 AEFEAS--------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAE 227 (517)
Q Consensus 156 ~~~~~~--------~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 227 (517)
+++... +..+|||||++|.+|.++... . + ....+
T Consensus 102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~------~--~------------------------------~~~~~ 143 (232)
T PRK10359 102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI------S--E------------------------------DVKAK 143 (232)
T ss_pred EeeeecccccccccCCeEEEEEEECCccHHHhhhc------c--H------------------------------HHHHH
Confidence 887643 357999999999999775211 0 0 22469
Q ss_pred HHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 228 TLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 228 i~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
|+.+|..||..|++||||||+||+++.+| ++|+|||..
T Consensus 144 i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~ 181 (232)
T PRK10359 144 IKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGK 181 (232)
T ss_pred HHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCc
Confidence 99999999999999999999999999988 999999986
No 415
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.9e-23 Score=187.54 Aligned_cols=203 Identities=21% Similarity=0.234 Sum_probs=139.8
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHH-HHhHHHHHHHHHHhcC-CCCccceeeeeecCcee
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-KLHRADMEKVILTMLD-HPFLPTLYAEFEASHYS 164 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~ 164 (517)
.+...|++|+||+||++.. .+..++.+.+.......+. ....+.+|+++|++|+ |++|++++++ +..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec-------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCE
Confidence 4667899999999997754 2356676666544332221 2235778999999995 5889999886 346
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
|++|||+.|.+|.+.+... . ..++.|++.+|.++|++||+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~~---------~----------------------------~~~~~qi~~~L~~lH~~GIvHrD 116 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPRG---------D----------------------------LAYFRAARRLLQQLHRCGVAHND 116 (218)
T ss_pred EEEEeeecCccHHhhhhhh---------h----------------------------HHHHHHHHHHHHHHHHCcCccCC
Confidence 9999999999986532110 0 13457999999999999999999
Q ss_pred C-CCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccccccccccccc
Q 010140 245 L-KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 323 (517)
Q Consensus 245 L-Kp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (517)
| ||+|||++.+|.++|+|||+|.......... ......++....
T Consensus 117 L~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~-r~L~~rDl~~ll---------------------------------- 161 (218)
T PRK12274 117 LAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM-RLLAREDLRHLL---------------------------------- 161 (218)
T ss_pred CCCcceEEEcCCCCEEEEECCCceecCCcchHH-HHHHHHHHHHHH----------------------------------
Confidence 9 7999999999999999999996433211100 000000000000
Q ss_pred cccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC-CCC-ccchHHHHHHHHHHHhhCCCCCCCCC
Q 010140 324 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHG-SAVDWWTLGVFLYEMLYGTTPFKGEN 401 (517)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~-~~~-~~~DiWSlGvil~elltG~~Pf~~~~ 401 (517)
......++.|++|+..... ..+ ...++++.|+-+|.++|+..++.+++
T Consensus 162 ------------------------------k~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 162 ------------------------------KHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred ------------------------------HHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0011367889999876443 233 56788899999999999999987654
Q ss_pred h
Q 010140 402 N 402 (517)
Q Consensus 402 ~ 402 (517)
+
T Consensus 212 ~ 212 (218)
T PRK12274 212 E 212 (218)
T ss_pred C
Confidence 3
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8.8e-24 Score=201.85 Aligned_cols=278 Identities=19% Similarity=0.247 Sum_probs=173.9
Q ss_pred CcCCCCceEEeeeeccceeEEEEEEEecCCC------------------------------CCCCceeeeeecchHHH--
Q 010140 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMV------------------------------GLPQCFYAMKVVDREAL-- 127 (517)
Q Consensus 80 ~~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~------------------------------~~~~~~vAiK~i~~~~~-- 127 (517)
.+.+++|+|+..||+|....||.++...... +...-+.|||.+-.-..
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 4667899999999999999999987653100 00112456665421100
Q ss_pred HHHHHHhHHHHHH------H-----------HHH----h-cCCCCccceeeeeec-------------------------
Q 010140 128 AIRKKLHRADMEK------V-----------ILT----M-LDHPFLPTLYAEFEA------------------------- 160 (517)
Q Consensus 128 ~~~~~~~~~~~E~------~-----------il~----~-l~HpnIv~l~~~~~~------------------------- 160 (517)
.....++.+-+|. . .+. + ..|||||++++.|.+
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 0111122222222 0 011 1 269999999998843
Q ss_pred --CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 161 --SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 161 --~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
+..+|+||..+ ..+|.+++..+.. ..+.-+.++.|+++|+.|||.+
T Consensus 313 g~~~tlylvMkrY-~~tLr~yl~~~~~-------------------------------s~r~~~~~laQlLEav~hL~~h 360 (598)
T KOG4158|consen 313 GEPKTLYLVMKRY-RQTLREYLWTRHR-------------------------------SYRTGRVILAQLLEAVTHLHKH 360 (598)
T ss_pred CCCceEEEehhcc-hhhHHHHHhcCCC-------------------------------chHHHHHHHHHHHHHHHHHHHc
Confidence 23479999988 5689888765421 1222245779999999999999
Q ss_pred CceeccCCCCceEEc--cCC--cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccc
Q 010140 239 GIVYRDLKPENVLVR--EDG--HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGK 314 (517)
Q Consensus 239 ~iiHrDLKp~NILl~--~~~--~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
||.|||||.+||||. +|+ .+.|+|||.+-..+...-
T Consensus 361 gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGl---------------------------------------- 400 (598)
T KOG4158|consen 361 GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGL---------------------------------------- 400 (598)
T ss_pred cchhhcccccceEEEecCCCCcEEEEcccceeeecccccc----------------------------------------
Confidence 999999999999984 444 578999998722211000
Q ss_pred ccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC------CccchHHHHHHHHH
Q 010140 315 KNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH------GSAVDWWTLGVFLY 388 (517)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~------~~~~DiWSlGvil~ 388 (517)
.-+..+..-..-|.-.-||||+....+- -.++|.|+.|.+.|
T Consensus 401 --------------------------------qlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY 448 (598)
T KOG4158|consen 401 --------------------------------QLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY 448 (598)
T ss_pred --------------------------------ccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence 0000111122346778899999865321 24899999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 389 EMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 389 elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
|++....||.+..+..+-.+-. ..-..|...... ++.+++|+..+|+.||.+|++.. .+..+++---|..-+
T Consensus 449 EIfg~~NPFY~rGem~L~~r~Y-qe~qLPalp~~v------pp~~rqlV~~lL~r~pskRvsp~-iAANvl~LsLw~~~~ 520 (598)
T KOG4158|consen 449 EIFGRSNPFYKRGEMLLDTRTY-QESQLPALPSRV------PPVARQLVFDLLKRDPSKRVSPN-IAANVLNLSLWRMGE 520 (598)
T ss_pred HHhccCCcccccchheechhhh-hhhhCCCCcccC------ChHHHHHHHHHhcCCccccCCcc-HHHhHHHHHHhcCch
Confidence 9999999998854332211111 111222222222 22489999999999999999984 444666554444444
Q ss_pred c
Q 010140 469 W 469 (517)
Q Consensus 469 ~ 469 (517)
|
T Consensus 521 ~ 521 (598)
T KOG4158|consen 521 D 521 (598)
T ss_pred H
Confidence 4
No 417
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=2.3e-23 Score=198.94 Aligned_cols=240 Identities=25% Similarity=0.294 Sum_probs=146.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC----------CCCccce
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD----------HPFLPTL 154 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~----------HpnIv~l 154 (517)
.+...+.||.|+++.||.+++.. +++.+|+|+............+.+.+|......+. |-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~-----t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVE-----TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT-----TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEcc-----CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 46788999999999999999987 78999999975443333445566665654443332 2122222
Q ss_pred eeeee---------cC---c-----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchh
Q 010140 155 YAEFE---------AS---H-----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTL 217 (517)
Q Consensus 155 ~~~~~---------~~---~-----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 217 (517)
++... .. . +.+++|+-+ .+||.+++........... ..
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~------------------------~l 142 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHS------------------------PL 142 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSH------------------------HH
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccc------------------------hh
Confidence 23221 11 1 347888888 6798877543100000000 01
Q ss_pred hhhh-hHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCC
Q 010140 218 FFNY-RFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC 296 (517)
Q Consensus 218 ~~~~-~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (517)
.... ..+..|+++.+++||+.||+|+||||+|++++.+|.++|+||+.....+.
T Consensus 143 ~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~------------------------- 197 (288)
T PF14531_consen 143 AFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT------------------------- 197 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE-------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc-------------------------
Confidence 1111 23568999999999999999999999999999999999999987632210
Q ss_pred CCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC----
Q 010140 297 ATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---- 372 (517)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~---- 372 (517)
.......+..|.+||.....
T Consensus 198 --------------------------------------------------------~~~~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 198 --------------------------------------------------------RYRCSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp --------------------------------------------------------EEEGGGS-TTTS-HHHHHHHTSCH
T ss_pred --------------------------------------------------------eeeccCCCcccCChhhhhhhcccC
Confidence 00001245779999987442
Q ss_pred ----CCCccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccc
Q 010140 373 ----GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448 (517)
Q Consensus 373 ----~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R 448 (517)
.++.+.|.|+||+++|.|++|..||........... .+.... ..+..+++||.+||++||.+|
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~-------~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCR-------DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS----------HHHHHHHHHHT-SSGGGS
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcC-------CcCHHHHHHHHHHccCCcccC
Confidence 368899999999999999999999986543221110 111111 122358999999999999998
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=3.4e-24 Score=226.95 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=171.3
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHH--HHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
+|...+.||++.|=+|.+|+++. ..|+||++-+.. ...+. ..+..+|++ ...++|||++.+.-+...+.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-------G~vVvKVFvk~~p~~sL~~-~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-------GLVVVKVFVKQDPTISLRP-FKQRLEEIK-FALMKAPNCLPFQKVLVTDK 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-------ceEEEEEEeccCCCCCchH-HHHHHHHHH-HHhhcCCcccchHHHHHhhH
Confidence 78999999999999999998875 348999986543 11222 223333555 66679999999988888888
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
..|||-+|. ..+|++.+..++. +...+.+.|+-||+.||.-+|..||+|
T Consensus 95 AAylvRqyv-khnLyDRlSTRPF------------------------------L~~iEKkWiaFQLL~al~qcH~~gVcH 143 (1431)
T KOG1240|consen 95 AAYLVRQYV-KHNLYDRLSTRPF------------------------------LVLIEKKWIAFQLLKALSQCHKLGVCH 143 (1431)
T ss_pred HHHHHHHHH-hhhhhhhhccchH------------------------------HHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 899999999 5599988766431 112233568899999999999999999
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
+|||.|||||+.-+-+.|+||..-+..-...+.+.
T Consensus 144 GDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa--------------------------------------------- 178 (1431)
T KOG1240|consen 144 GDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA--------------------------------------------- 178 (1431)
T ss_pred cccccceEEEeeechhhhhcccccCCccCCCCCcc---------------------------------------------
Confidence 99999999999888899999986543322111100
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCC----------C-CCccchHHHHHHHHHHHh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ----------G-HGSAVDWWTLGVFLYEML 391 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~----------~-~~~~~DiWSlGvil~ell 391 (517)
+... .- .+-..-..|.|||.+... . .+++.||||+||+++||+
T Consensus 179 -------------df~f------------FF-DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf 232 (1431)
T KOG1240|consen 179 -------------DFTF------------FF-DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELF 232 (1431)
T ss_pred -------------cceE------------EE-ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHH
Confidence 0000 00 000122369999988541 2 467899999999999999
Q ss_pred h-CCCCCCCC-----------ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhh
Q 010140 392 Y-GTTPFKGE-----------NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK 459 (517)
Q Consensus 392 t-G~~Pf~~~-----------~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell 459 (517)
+ |++||.-. +.+..+.+|.. ..++.||..|++.||.+|.+++ +.|
T Consensus 233 ~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ied-------------------~~~Rnlil~Mi~rdPs~RlSAe----dyL 289 (1431)
T KOG1240|consen 233 LEGRPLFTLSQLLAYRSGNADDPEQLLEKIED-------------------VSLRNLILSMIQRDPSKRLSAE----DYL 289 (1431)
T ss_pred hcCCCcccHHHHHhHhccCccCHHHHHHhCcC-------------------ccHHHHHHHHHccCchhccCHH----HHH
Confidence 7 78888521 11111211111 1389999999999999999997 666
Q ss_pred cC
Q 010140 460 RH 461 (517)
Q Consensus 460 ~h 461 (517)
+-
T Consensus 290 ~~ 291 (1431)
T KOG1240|consen 290 QK 291 (1431)
T ss_pred Hh
Confidence 54
No 419
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=2.7e-23 Score=190.57 Aligned_cols=142 Identities=21% Similarity=0.195 Sum_probs=102.2
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHH-----------------------HHhHHHHHHHHHHh
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------------------KLHRADMEKVILTM 145 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-----------------------~~~~~~~E~~il~~ 145 (517)
...||+|+||.||+|.+. +++.||||+++........ .......|+.+|.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05147 2 NGCISTGKEANVYHATTA------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKR 75 (190)
T ss_pred CCccccccceEEEEEECC------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 467999999999999875 4688999999754221100 01223459999999
Q ss_pred cCCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHH
Q 010140 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYA 225 (517)
Q Consensus 146 l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (517)
+.+++|........ . ..+|||||++|++|...+... ..++.. .+..++
T Consensus 76 l~~~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~--~~~~~~----------------------------~~~~i~ 123 (190)
T cd05147 76 LVTAGIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKD--APLSES----------------------------KARELY 123 (190)
T ss_pred HHHCCCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhc--CCCCHH----------------------------HHHHHH
Confidence 98888754333222 2 238999999887775443221 222222 224678
Q ss_pred HHHHHHHHHH-HhcCceeccCCCCceEEccCCcEEeccCCCcccc
Q 010140 226 AETLLALEYL-HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 269 (517)
Q Consensus 226 ~qi~~aL~yL-H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~ 269 (517)
.||+.+|.|| |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 124 ~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 124 LQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 9999999999 799999999999999998 578999999998543
No 420
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=8.3e-24 Score=210.21 Aligned_cols=154 Identities=31% Similarity=0.463 Sum_probs=111.1
Q ss_pred hhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCC
Q 010140 221 YRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPM 300 (517)
Q Consensus 221 ~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (517)
+..++.|++.|++| +|.+|||+||.||++..+..+||.|||+.......+.
T Consensus 361 ~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~-------------------------- 411 (516)
T KOG1033|consen 361 MLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET-------------------------- 411 (516)
T ss_pred HHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc--------------------------
Confidence 45788999999999 9999999999999999999999999999744332110
Q ss_pred CCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchH
Q 010140 301 QPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDW 380 (517)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~Di 380 (517)
..+.....+.-+||..||+||.+.+..|+.++||
T Consensus 412 ----------------------------------------------~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdI 445 (516)
T KOG1033|consen 412 ----------------------------------------------VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDI 445 (516)
T ss_pred ----------------------------------------------ccchhhhhhhcccccccCCHHHHhhhhhhhhcch
Confidence 0011123445589999999999999999999999
Q ss_pred HHHHHHHHHHhh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhh
Q 010140 381 WTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK 459 (517)
Q Consensus 381 WSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell 459 (517)
||||+||+||+. -...|... ..+..+..+.++ |...... ++-.+|+.+||...|.+||++. +.-
T Consensus 446 yaLGlil~EL~~~f~T~~er~---~t~~d~r~g~ip-~~~~~d~-------p~e~~ll~~lls~~p~~RP~~~----~~~ 510 (516)
T KOG1033|consen 446 YALGLILAELLIQFSTQFERI---ATLTDIRDGIIP-PEFLQDY-------PEEYTLLQQLLSPSPEERPSAI----EVA 510 (516)
T ss_pred hhHHHHHHHHHHHhccHHHHH---HhhhhhhcCCCC-hHHhhcC-------cHHHHHHHHhcCCCcccCchHH----HHh
Confidence 999999999997 44444322 223333333222 1111111 2346999999999999999765 655
Q ss_pred cCCCc
Q 010140 460 RHEFF 464 (517)
Q Consensus 460 ~hp~f 464 (517)
-|+|.
T Consensus 511 ~~~~~ 515 (516)
T KOG1033|consen 511 LHEFL 515 (516)
T ss_pred hhhhc
Confidence 66654
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=5e-22 Score=182.72 Aligned_cols=144 Identities=20% Similarity=0.178 Sum_probs=104.9
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH-----------------------HHHHHhHHHHHHHHHHh
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA-----------------------IRKKLHRADMEKVILTM 145 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~-----------------------~~~~~~~~~~E~~il~~ 145 (517)
.+.||+|+||.||+|++. +++.||||+++..... ..........|...+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05145 2 NGCISTGKEANVYHARTG------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR 75 (190)
T ss_pred CceeecCCCcEEEEEEcC------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999999865 3688999998754210 00012234578999999
Q ss_pred cCCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHH
Q 010140 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYA 225 (517)
Q Consensus 146 l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (517)
+.|++|.....+.... .||||||++|+++....... ..+... ..+.++
T Consensus 76 l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~----------------------------~~~~i~ 123 (190)
T cd05145 76 LYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEE----------------------------EAEELY 123 (190)
T ss_pred HHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHH----------------------------HHHHHH
Confidence 9999885544443332 48999999887654322111 112111 224678
Q ss_pred HHHHHHHHHHHh-cCceeccCCCCceEEccCCcEEeccCCCcccccc
Q 010140 226 AETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 271 (517)
Q Consensus 226 ~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~ 271 (517)
.|++.+|.+||+ +||+||||||+|||++ ++.++|+|||++.....
T Consensus 124 ~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 124 EQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred HHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999999999 9999999999999998 89999999999976553
No 422
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.86 E-value=1.8e-22 Score=213.83 Aligned_cols=314 Identities=29% Similarity=0.436 Sum_probs=229.2
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...+++.+++-+-+|.+|.++.++-.. ++...++|+.........+..+....+-.++...+||.++.....|..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~-----sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAG-----SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccc-----cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC
Confidence 456788999999999999999987665 445567777655443333344444445556655677888887777788
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
....+|||+|+.|++|...++..+... ...+ |.++..++.+++|||+..+
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~s--aepa----------------------------Rs~i~~~vqs~e~L~s~~r 925 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLS--AEPA----------------------------RSPILERVQSLESLHSSLR 925 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCcc--cccc----------------------------cchhHHHHhhhhccccchh
Confidence 889999999999999998877654211 1111 3456788999999999999
Q ss_pred eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 241 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
+|||++|.|+|+..+|+.+++|||+.......+..... + ++.. ...
T Consensus 926 ~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~-------------s--------g~~~-------------~~~ 971 (1205)
T KOG0606|consen 926 KHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDL-------------S--------GPSS-------------SGT 971 (1205)
T ss_pred hcccccccchhhcccCCcccCccccccccccccCcCCc-------------c--------cccc-------------cCc
Confidence 99999999999999999999999965443322111100 0 0000 000
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~ 400 (517)
+.......+.+. . ............||+.|.+||.+.+...+..+|+|++|++++|.++|.+||...
T Consensus 972 ~~~~~~~~~~~~------------l-~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 972 PRRLSRSERRPQ------------L-SADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred cccccccccccc------------c-ccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 000000000000 0 000112345678999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCCCC
Q 010140 401 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEV 480 (517)
Q Consensus 401 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~~~ 480 (517)
.....+..|......+|........ .+++++.++|..+|.+|.++ .+..++..|+||++++|+.+....-+++
T Consensus 1039 tpq~~f~ni~~~~~~~p~g~~~~s~------~aq~~~~~ll~~~~~qr~~a-~~~~e~k~~~~~~~~~~~~l~~q~~~~~ 1111 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGPEEGSY------EAQDLINRLLTEEPTQRLGA-KGAAEVKGHPFFQDVDWENLALQKAEFV 1111 (1205)
T ss_pred chhhhhhccccCCCCCCCCccccCh------hhhhhhhhhhccCchhccCc-ccccccccCCccCCCCccccccccCccC
Confidence 9999999999988888766554444 48999999999999999998 4556899999999999999988776666
Q ss_pred CCC
Q 010140 481 PNN 483 (517)
Q Consensus 481 ~~~ 483 (517)
|..
T Consensus 1112 p~~ 1114 (1205)
T KOG0606|consen 1112 PQP 1114 (1205)
T ss_pred CCC
Confidence 543
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=9.5e-22 Score=179.20 Aligned_cols=242 Identities=18% Similarity=0.286 Sum_probs=182.5
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
+..++..++.+|.+...|+.|+|++.+ ..++.|++...... ....+.|..|.-.|+-+.||||+.+++.+..
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqg-------ndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacns 258 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQG-------NDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNS 258 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccC-------cchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccC
Confidence 345566788899999999999999986 33567777655433 2345667778888999999999999999999
Q ss_pred CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC-
Q 010140 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG- 239 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~- 239 (517)
..++.++..|++.|+|+..+.....--..-+++ ..++.+|++|++|||+..
T Consensus 259 ppnlv~isq~mp~gslynvlhe~t~vvvd~sqa----------------------------v~faldiargmaflhslep 310 (448)
T KOG0195|consen 259 PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQA----------------------------VRFALDIARGMAFLHSLEP 310 (448)
T ss_pred CCCceEeeeeccchHHHHHHhcCccEEEecchH----------------------------HHHHHHHHhhHHHHhhcch
Confidence 999999999999999999987653222222222 267889999999999974
Q ss_pred -ceeccCCCCceEEccCCcEEe--ccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccc
Q 010140 240 -IVYRDLKPENVLVREDGHIML--SDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKN 316 (517)
Q Consensus 240 -iiHrDLKp~NILl~~~~~vkL--~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (517)
|.---|....++|+++.+.+| +|--++..
T Consensus 311 ~ipr~~lns~hvmidedltarismad~kfsfq------------------------------------------------ 342 (448)
T KOG0195|consen 311 MIPRFYLNSKHVMIDEDLTARISMADTKFSFQ------------------------------------------------ 342 (448)
T ss_pred hhhhhhcccceEEecchhhhheecccceeeee------------------------------------------------
Confidence 444468888999998876655 34332211
Q ss_pred ccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC---CccchHHHHHHHHHHHhhC
Q 010140 317 KKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH---GSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~---~~~~DiWSlGvil~elltG 393 (517)
.....-.|.||+||.+...+- -.++|+|||++++|||.|.
T Consensus 343 -------------------------------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tr 385 (448)
T KOG0195|consen 343 -------------------------------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTR 385 (448)
T ss_pred -------------------------------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcc
Confidence 011234788999999988764 3589999999999999999
Q ss_pred CCCCCCCChHHHHHHHhcCCC--CCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 394 TTPFKGENNEKTLINILKKPL--TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 394 ~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+.||....+.+.-.+|.-..+ ..|+... ..+..|+.-|++.||.+||.+.
T Consensus 386 evpfadlspmecgmkialeglrv~ippgis---------~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 386 EVPFADLSPMECGMKIALEGLRVHIPPGIS---------RHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred ccccccCCchhhhhhhhhccccccCCCCcc---------HHHHHHHHHHhcCCCCcCCCcc
Confidence 999999998887777654332 2332221 2488999999999999999986
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=4.6e-21 Score=177.38 Aligned_cols=136 Identities=21% Similarity=0.212 Sum_probs=101.9
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-----CCCCccceeeeeecCc
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-----DHPFLPTLYAEFEASH 162 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~ 162 (517)
-.+.||+|+||.||. +.. +.. .+||++..... ...+.+.+|+.+++.+ +||||++++++++++.
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~-----~~~-k~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~ 74 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPE-----DAQ-RCIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC 74 (210)
T ss_pred CcceecCCCceEEEE--CCC-----CcC-eEEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC
Confidence 356899999999995 333 222 37998865422 1234577799999999 5799999999998763
Q ss_pred ---eeE-EEEEe--cCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH-HHH
Q 010140 163 ---YSC-LVMEY--CPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL-EYL 235 (517)
Q Consensus 163 ---~~~-lV~E~--~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL-~yL 235 (517)
.++ +|||| +.+|+|.+++... .+.+. . .++.|++.++ +||
T Consensus 75 g~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~----------------------------~~~~~~L~~l~~yL 121 (210)
T PRK10345 75 GTGYVYDVIADFDGKPSITLTEFAEQC---RYEED--V----------------------------AQLRQLLKKLKRYL 121 (210)
T ss_pred CCeEEEEEEecCCCCcchhHHHHHHcc---cccHh--H----------------------------HHHHHHHHHHHHHH
Confidence 434 78999 5579999999653 22222 1 3357888888 999
Q ss_pred HhcCceeccCCCCceEEcc----CCcEEeccCCCcc
Q 010140 236 HMMGIVYRDLKPENVLVRE----DGHIMLSDFDLSF 267 (517)
Q Consensus 236 H~~~iiHrDLKp~NILl~~----~~~vkL~DFGls~ 267 (517)
|+++||||||||+|||++. ++.++|+||+.+.
T Consensus 122 h~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 122 LDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred HHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 9999999999999999974 3379999955543
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=6.1e-21 Score=206.30 Aligned_cols=197 Identities=26% Similarity=0.376 Sum_probs=147.4
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC---CCCccceeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD---HPFLPTLYAE 157 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~ 157 (517)
+..+.|.|.+.||+|+||.||+|...+ ++.||+|+-+...... +..-.+++.+|+ -+.|..+...
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~------~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a 762 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN------GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSA 762 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC------CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHH
Confidence 456789999999999999999998874 6899999976542210 000122333443 2345566666
Q ss_pred eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHh
Q 010140 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHM 237 (517)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 237 (517)
+.-.+..+||+||.+.|+|.+++... +...+..+ .+++.||+.-|+.||.
T Consensus 763 ~~~~~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv----------------------------~~~~~qml~ive~lH~ 812 (974)
T KOG1166|consen 763 HVFQNASVLVSEYSPYGTLLDLINTN--KVMDEYLV----------------------------MFFSCQMLRIVEHLHA 812 (974)
T ss_pred HccCCcceeeeeccccccHHHhhccC--CCCCchhh----------------------------hHHHHHHHHHHHHHHh
Confidence 66677789999999999999998732 22222222 2567899999999999
Q ss_pred cCceeccCCCCceEEcc-------CCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccc
Q 010140 238 MGIVYRDLKPENVLVRE-------DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSV 310 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~-------~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (517)
.+|||+||||+|+||.. ..-++|+|||.|-.+..-++
T Consensus 813 ~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~------------------------------------ 856 (974)
T KOG1166|consen 813 MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPD------------------------------------ 856 (974)
T ss_pred cceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCC------------------------------------
Confidence 99999999999999952 33699999998843322111
Q ss_pred ccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHH
Q 010140 311 SHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEM 390 (517)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~el 390 (517)
..+....++|-.+-++|+..|.++++.+|.|.|+.+++.|
T Consensus 857 ----------------------------------------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~m 896 (974)
T KOG1166|consen 857 ----------------------------------------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVM 896 (974)
T ss_pred ----------------------------------------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHH
Confidence 1223455788899999999999999999999999999999
Q ss_pred hhCCC
Q 010140 391 LYGTT 395 (517)
Q Consensus 391 ltG~~ 395 (517)
|.|++
T Consensus 897 LFG~y 901 (974)
T KOG1166|consen 897 LFGKY 901 (974)
T ss_pred HHHHH
Confidence 99865
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=8.3e-20 Score=173.14 Aligned_cols=146 Identities=24% Similarity=0.183 Sum_probs=106.1
Q ss_pred CceEEeeeeccceeEEEEEE-EecCCCCCCCceeeeeecchHHHH---------------------HHHHHhHHHHHHHH
Q 010140 85 HFRLLRRLGSGDIGNVYLCQ-IRNPMVGLPQCFYAMKVVDREALA---------------------IRKKLHRADMEKVI 142 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~-~~~~~~~~~~~~vAiK~i~~~~~~---------------------~~~~~~~~~~E~~i 142 (517)
.|.+.+.||+|+||.||+|. +.. +++.||||++...... .......+..|+.+
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~-----~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 103 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDG-----SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN 103 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCC-----CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence 48899999999999999998 333 5788999998753210 00012345679999
Q ss_pred HHhcCCCC--ccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhh
Q 010140 143 LTMLDHPF--LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFN 220 (517)
Q Consensus 143 l~~l~Hpn--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 220 (517)
+.++.+.+ +.++++. . ..||||||++|++|....... .... ...
T Consensus 104 L~~L~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~--~~~~----------------------------~~~ 149 (237)
T smart00090 104 LQRLYEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD--VEPE----------------------------EEE 149 (237)
T ss_pred HHHHHhcCCCCCeeeEe---c-CceEEEEEecCCccccccccc--CCcc----------------------------hHH
Confidence 99997533 3444432 2 358999999888876543211 1111 111
Q ss_pred hhHHHHHHHHHHHHHHhcC-ceeccCCCCceEEccCCcEEeccCCCccccc
Q 010140 221 YRFYAAETLLALEYLHMMG-IVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270 (517)
Q Consensus 221 ~~~~~~qi~~aL~yLH~~~-iiHrDLKp~NILl~~~~~vkL~DFGls~~~~ 270 (517)
.+.++.||+.+|.+||++| |+||||||+||+++ ++.++|+|||.+....
T Consensus 150 ~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 150 EFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 2467899999999999999 99999999999999 8899999999986544
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=2e-21 Score=206.25 Aligned_cols=266 Identities=25% Similarity=0.381 Sum_probs=194.4
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~ 162 (517)
..|.+.+.||+|+|+.|-++..... ....+|+|.+.... .......+...|..+-+.+. |+|++++++...+.+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~----~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~ 94 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRD----PESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR 94 (601)
T ss_pred ccccccccccccccchhhhhhhcCC----CcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCc
Confidence 4588888899999999998876542 45667777775442 11233445555788888886 999999999999999
Q ss_pred eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH-hcCce
Q 010140 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH-MMGIV 241 (517)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH-~~~ii 241 (517)
..++++||..|+++...+............+ ..+..|+..+|.|+| ..++.
T Consensus 95 ~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~----------------------------~~~~~ql~s~l~~~H~~~~~~ 146 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKISHPDSTGTSSSSA----------------------------SRYLPQLNSGLSYLHPENGVT 146 (601)
T ss_pred ccccccCcccccccccccccCCccCCCCcch----------------------------hhhhhhhccCccccCcccccc
Confidence 9999999999999987663211112222222 267799999999999 99999
Q ss_pred eccCCCCceEEccCC-cEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccc
Q 010140 242 YRDLKPENVLVREDG-HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 320 (517)
Q Consensus 242 HrDLKp~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (517)
||||||+|.+++..+ .++++|||+|..+...
T Consensus 147 h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~------------------------------------------------ 178 (601)
T KOG0590|consen 147 HRDIKPSNSLLDESGSALKIADFGLATAYRNK------------------------------------------------ 178 (601)
T ss_pred cCCCCCccchhccCCCcccCCCchhhcccccc------------------------------------------------
Confidence 999999999999999 9999999998443210
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCcccCC-CCCcccchhhcCCC-CCccchHHHHHHHHHHHhhCCCCCC
Q 010140 321 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG-THEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFK 398 (517)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~ 398 (517)
..........+| ++.|+|||...+.. .+...|+||+|+++..+++|..|+.
T Consensus 179 ---------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~ 231 (601)
T KOG0590|consen 179 ---------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWD 231 (601)
T ss_pred ---------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcc
Confidence 000112233467 99999999999854 5889999999999999999999998
Q ss_pred CCChHHHH-HHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCC
Q 010140 399 GENNEKTL-INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 466 (517)
Q Consensus 399 ~~~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~ 466 (517)
........ .........+-...+. .......+++.++|..+|.+|.+.. ++..+||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~k~l~~~~~~r~s~~----~~~~d~~~~~ 291 (601)
T KOG0590|consen 232 FPSRKDGRYSSWKSNKGRFTQLPWN-----SISDQAHDLLHKILKENPSNRLSIE----ELKLDNWLSS 291 (601)
T ss_pred ccccccccceeecccccccccCccc-----cCChhhhhcccccccCCchhccccc----cccccccccc
Confidence 65443321 1122211110011111 1112478999999999999999998 9999999988
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=5.8e-19 Score=165.31 Aligned_cols=137 Identities=22% Similarity=0.200 Sum_probs=109.9
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchH-----HHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDRE-----ALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~-----~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
+.||+|++|.||+|...+ ..+++|+.... .........++.+|+.++..+.|++|+....++.+....
T Consensus 2 ~~l~~G~~~~vy~~~~~~-------~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLG-------IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF 74 (211)
T ss_pred cccccCceEEEEEEeeCC-------CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC
Confidence 579999999999998743 56888875432 122223345677899999999999998877777777888
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
++||||++|++|.+++..... ....++.+++.+|.+||+.|++|||
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~~----------------------------------~~~~i~~~i~~~l~~lH~~~i~H~D 120 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNGM----------------------------------EELELSREIGRLVGKLHSAGIIHGD 120 (211)
T ss_pred EEEEEEeCCcCHHHHHHhccH----------------------------------HHHHHHHHHHHHHHHHHhCCcccCC
Confidence 999999999999988754311 1125778999999999999999999
Q ss_pred CCCCceEEccCCcEEeccCCCccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~ 268 (517)
++|+|||++ ++.++|+|||++..
T Consensus 121 l~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 121 LTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcccEEEE-CCCEEEEECCcccC
Confidence 999999999 78999999999853
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.80 E-value=9.3e-19 Score=162.37 Aligned_cols=132 Identities=24% Similarity=0.222 Sum_probs=104.1
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchH-----HHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeE
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDRE-----ALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~-----~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 165 (517)
.||+|+||.||+|... +..+++|+.... .........++.+|+.++..+.|+++....-++......+
T Consensus 1 ~ig~G~~~~vy~~~~~-------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeecC-------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence 4899999999999843 366888885432 1122233466778999999999887665555555666789
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccC
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDL 245 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 245 (517)
+||||++|++|.+++..... .++.|++.+|.+||+.|++|||+
T Consensus 74 lv~e~~~g~~l~~~~~~~~~-------------------------------------~~~~~i~~~l~~lH~~gi~H~Dl 116 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGND-------------------------------------ELLREIGRLVGKLHKAGIVHGDL 116 (199)
T ss_pred EEEEEECCccHHHHHhhcHH-------------------------------------HHHHHHHHHHHHHHHCCeecCCC
Confidence 99999999999887654210 34689999999999999999999
Q ss_pred CCCceEEccCCcEEeccCCCcc
Q 010140 246 KPENVLVREDGHIMLSDFDLSF 267 (517)
Q Consensus 246 Kp~NILl~~~~~vkL~DFGls~ 267 (517)
+|+||+++ ++.++++|||++.
T Consensus 117 ~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 117 TTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CcceEEEE-CCcEEEEECCCCc
Confidence 99999999 8899999999873
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.79 E-value=6.2e-19 Score=187.72 Aligned_cols=139 Identities=22% Similarity=0.187 Sum_probs=109.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeec-----chHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeee
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVV-----DREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i-----~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 158 (517)
..|...+.||+|+||+||+|..... .+++|+. ............++.+|+.+++.++|++|+..+.++
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-------~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-------DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-------cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 4457789999999999999987642 2233321 111122223346677899999999999999887777
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
......++||||++|++|.+++... ..++.|++.+|.|||++
T Consensus 406 ~~~~~~~lv~E~~~g~~L~~~l~~~--------------------------------------~~~~~~i~~~L~~lH~~ 447 (535)
T PRK09605 406 VDPEEKTIVMEYIGGKDLKDVLEGN--------------------------------------PELVRKVGEIVAKLHKA 447 (535)
T ss_pred EeCCCCEEEEEecCCCcHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHhC
Confidence 7777889999999999998876421 25678999999999999
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCccc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
||+||||||+|||+ .++.++|+|||+++.
T Consensus 448 giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 448 GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999 678999999999854
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.78 E-value=8.3e-19 Score=162.55 Aligned_cols=139 Identities=24% Similarity=0.212 Sum_probs=105.2
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-------------------HHHHhHHHHHHHHHHhc
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------RKKLHRADMEKVILTML 146 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-------------------~~~~~~~~~E~~il~~l 146 (517)
|.+.+.||+|+||.||+|... +++.||||++....... .........|..++..+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 90 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL 90 (198)
T ss_pred hhcCCccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence 888899999999999999764 46789999865432000 01112356688999999
Q ss_pred CCCC--ccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHH
Q 010140 147 DHPF--LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFY 224 (517)
Q Consensus 147 ~Hpn--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 224 (517)
.|++ ++..++ ....++||||++|++|...... .. ...+
T Consensus 91 ~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~----------------------------~~~~ 130 (198)
T cd05144 91 YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------ED----------------------------PEEV 130 (198)
T ss_pred HHcCCCCCceee----cCCceEEEEEeCCcchhhcccc--------cc----------------------------HHHH
Confidence 8874 444443 2345899999999998654220 01 1256
Q ss_pred HHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCccccc
Q 010140 225 AAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270 (517)
Q Consensus 225 ~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~ 270 (517)
+.+++.++.++|+.||+||||||+||+++.++.++|+|||++..+.
T Consensus 131 ~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 131 LDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred HHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 7899999999999999999999999999999999999999986554
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.75 E-value=7.6e-18 Score=171.11 Aligned_cols=203 Identities=22% Similarity=0.314 Sum_probs=145.0
Q ss_pred HHhcCCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhh
Q 010140 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYR 222 (517)
Q Consensus 143 l~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 222 (517)
|+.+.|.|+.++++.+.++...+.|.+||..|+|.+.+.... +.... +|. -
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~---~~~d~----~F~----------------------~ 51 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED---IKLDY----FFI----------------------L 51 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc---cCccH----HHH----------------------H
Confidence 456889999999999999999999999999999999887621 11111 111 1
Q ss_pred HHHHHHHHHHHHHHhcCc-eeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCC
Q 010140 223 FYAAETLLALEYLHMMGI-VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQ 301 (517)
Q Consensus 223 ~~~~qi~~aL~yLH~~~i-iHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (517)
.++++|+.||.|||...| .|+.|+..|++++..+.+||+|||+.........
T Consensus 52 s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~--------------------------- 104 (484)
T KOG1023|consen 52 SFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE--------------------------- 104 (484)
T ss_pred HHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhccccccccc---------------------------
Confidence 467999999999999876 9999999999999999999999999633211000
Q ss_pred CccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCC-------C
Q 010140 302 PVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-------H 374 (517)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~-------~ 374 (517)
........-...|.|||.+.+.. .
T Consensus 105 -------------------------------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~~ 135 (484)
T KOG1023|consen 105 -------------------------------------------------PEAHHPIRKALLWTAPELLRGALSQSLESAL 135 (484)
T ss_pred -------------------------------------------------ccccchhHHHHhccCHHHhcccccccccccc
Confidence 00000011234699999998742 3
Q ss_pred CccchHHHHHHHHHHHhhCCCCCCCC----ChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccC
Q 010140 375 GSAVDWWTLGVFLYEMLYGTTPFKGE----NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450 (517)
Q Consensus 375 ~~~~DiWSlGvil~elltG~~Pf~~~----~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t 450 (517)
+.+.||||+|++++|+++...||... +..+....+.++............. +...++..++..||..+|.+||+
T Consensus 136 ~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs 213 (484)
T KOG1023|consen 136 TQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPS 213 (484)
T ss_pred cccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCcc
Confidence 66799999999999999999999863 2234555555522211111111111 23336899999999999999999
Q ss_pred CC
Q 010140 451 SL 452 (517)
Q Consensus 451 ~~ 452 (517)
+.
T Consensus 214 ~~ 215 (484)
T KOG1023|consen 214 IE 215 (484)
T ss_pred HH
Confidence 96
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.72 E-value=1.8e-17 Score=152.03 Aligned_cols=140 Identities=23% Similarity=0.225 Sum_probs=96.3
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHh---------------------HHHHHHHHHHhcC
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH---------------------RADMEKVILTMLD 147 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~---------------------~~~~E~~il~~l~ 147 (517)
.+.||+|+||+||+|.+. +++.||||++............ ....|...+..+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 75 (187)
T cd05119 2 GGPIGTGKEADVYLALDG------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY 75 (187)
T ss_pred CcccccccceeEEEEECC------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence 467999999999999865 3578999998753221111111 1134666666664
Q ss_pred CC--CccceeeeeecCceeEEEEEecCCCchhHH-HHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHH
Q 010140 148 HP--FLPTLYAEFEASHYSCLVMEYCPGGDLYAA-RQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFY 224 (517)
Q Consensus 148 Hp--nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~-l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 224 (517)
+. .+.+.+++ ...++||||++|+++... +.... .. ...+.+
T Consensus 76 ~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~---------------------------~~~~~~ 119 (187)
T cd05119 76 EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL---------------------------EDPEEL 119 (187)
T ss_pred HcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc---------------------------ccHHHH
Confidence 43 34555543 235899999998654211 11100 00 122467
Q ss_pred HHHHHHHHHHHHh-cCceeccCCCCceEEccCCcEEeccCCCcccccc
Q 010140 225 AAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 271 (517)
Q Consensus 225 ~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~ 271 (517)
+.+++.++.++|. +||+||||||+||+++ ++.++|+|||.+.....
T Consensus 120 ~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 120 YDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred HHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence 8999999999999 9999999999999999 89999999999965543
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=7.5e-17 Score=153.27 Aligned_cols=136 Identities=23% Similarity=0.209 Sum_probs=99.7
Q ss_pred eee-ccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH----------HHHHhHHHHHHHHHHhcCCCCc--cceeee
Q 010140 91 RLG-SGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----------RKKLHRADMEKVILTMLDHPFL--PTLYAE 157 (517)
Q Consensus 91 ~LG-~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~----------~~~~~~~~~E~~il~~l~HpnI--v~l~~~ 157 (517)
.|| .|+.|+||.+... +..++||.+....... .....++.+|+.++..|.|++| ++.+++
T Consensus 38 ~lg~~~g~gtv~~v~~~-------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~ 110 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP-------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAA 110 (239)
T ss_pred eeecCCCCccEEEEEeC-------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEee
Confidence 466 7777888887654 3568888775432110 1223567789999999998875 677776
Q ss_pred eecC-ce---eEEEEEecCC-CchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHH
Q 010140 158 FEAS-HY---SCLVMEYCPG-GDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLAL 232 (517)
Q Consensus 158 ~~~~-~~---~~lV~E~~~g-g~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 232 (517)
.... .. .++|||+++| .+|.+++... .+.. ..+.||+.+|
T Consensus 111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~--------------------------------~~~~~i~~~l 155 (239)
T PRK01723 111 RVVRHGLFYRADILIERIEGARDLVALLQEA---PLSE--------------------------------EQWQAIGQLI 155 (239)
T ss_pred eeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCH--------------------------------HHHHHHHHHH
Confidence 4332 22 3599999997 6888876542 1111 2246899999
Q ss_pred HHHHhcCceeccCCCCceEEccCCcEEeccCCCccc
Q 010140 233 EYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 233 ~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
.+||++||+||||||+|||++.++.++|+|||.+..
T Consensus 156 ~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 156 ARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 999999999999999999999999999999999854
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.65 E-value=3.8e-16 Score=137.35 Aligned_cols=132 Identities=23% Similarity=0.281 Sum_probs=107.2
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCC--CCccceeeeeecCceeE
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH--PFLPTLYAEFEASHYSC 165 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~~~~~~~~~~~ 165 (517)
+.+.||+|.++.||++...+ ..+++|+...... ...+..|+.++..+.| .++++++.++...+..|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 69 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSY 69 (155)
T ss_pred cceecccccccceEEEEecC-------CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccE
Confidence 46789999999999998753 5689999876532 3456669999999976 58999999998888999
Q ss_pred EEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc---Ccee
Q 010140 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM---GIVY 242 (517)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~iiH 242 (517)
++|||++|+.+..+ ... ....++.+++.+|++||.. +++|
T Consensus 70 ~v~e~~~g~~~~~~---------~~~----------------------------~~~~~~~~~~~~l~~lh~~~~~~i~H 112 (155)
T cd05120 70 LLMEWIEGETLDEV---------SEE----------------------------EKEDIAEQLAELLAKLHQLPLLVLCH 112 (155)
T ss_pred EEEEecCCeecccC---------CHH----------------------------HHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 99999988877542 000 0124678999999999985 7999
Q ss_pred ccCCCCceEEccCCcEEeccCCCccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
+||+|+|||++..+.++++|||.+..
T Consensus 113 ~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 113 GDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCCcceEEEECCcEEEEEecccccC
Confidence 99999999999989999999999853
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=3.5e-15 Score=151.86 Aligned_cols=260 Identities=22% Similarity=0.196 Sum_probs=177.5
Q ss_pred CCceEEeeeec--cceeEEEEEEE--ecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeee
Q 010140 84 DHFRLLRRLGS--GDIGNVYLCQI--RNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (517)
Q Consensus 84 ~~y~i~~~LG~--G~fG~Vy~~~~--~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 158 (517)
..|.+...+|. |.+|.||.+++ .. ....+|+|.-+..... ...-.+-.+|..-...+ .|+|.++.+..+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~-----s~~~~a~k~s~~p~s~-p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSE-----SPHKFAVKKSKIPFSP-PLDSKRKLREFLSHHKIDSHENPVRDSPAW 187 (524)
T ss_pred hhcccccccccCCCCCceeecccCCccc-----CCcccccccccCCCCC-ccccccccchhhcccccCccccccccCccc
Confidence 45778899999 99999999988 44 5677888873321110 01111222355555555 599999999999
Q ss_pred ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHH----HHHH
Q 010140 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLL----ALEY 234 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----aL~y 234 (517)
+..+.+|+-+|+| |.+|..+..... .-++.... ..+..+... ||..
T Consensus 188 e~~~~lfiqtE~~-~~sl~~~~~~~~-~~~p~~~l----------------------------~~~~~~~~~~~~~al~~ 237 (524)
T KOG0601|consen 188 EGSGILFIQTELC-GESLQSYCHTPC-NFLPDNLL----------------------------WNSLRDWLSRDVTALSH 237 (524)
T ss_pred ccCCcceeeeccc-cchhHHhhhccc-ccCCchhh----------------------------hhHHhhhhhcccccccc
Confidence 9999999999999 678877654421 11222222 234456666 9999
Q ss_pred HHhcCceeccCCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 235 LHMMGIVYRDLKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 235 LH~~~iiHrDLKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
+|+.+|+|-|+||+||++..+ ...+++|||+...+....-..
T Consensus 238 ~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~------------------------------------- 280 (524)
T KOG0601|consen 238 LHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSS------------------------------------- 280 (524)
T ss_pred cCCCcccccccchhheecccccceeecCCcceeEEccCCcccc-------------------------------------
Confidence 999999999999999999999 789999999985544211000
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhC
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG 393 (517)
.........|...|++||.+.+. ++...||+++|.++.+..+|
T Consensus 281 ------------------------------------~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~ 323 (524)
T KOG0601|consen 281 ------------------------------------VFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILG 323 (524)
T ss_pred ------------------------------------ceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhh
Confidence 00001112467789999999875 89999999999999999988
Q ss_pred CCCCCCC--ChHHHHHHHhcCCCCCCCCCC-CCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCC
Q 010140 394 TTPFKGE--NNEKTLINILKKPLTFPRIGV-SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 394 ~~Pf~~~--~~~~~~~~i~~~~~~~p~~~~-~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
..+.... +....+.... .|...+ ... ..+...+..|++.+|-.|+++. .+++|+++....
T Consensus 324 ~~~~~~g~~~~W~~~r~~~-----ip~e~~~~~s------~~l~~~~~~~~d~~~~~~~~~q----~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 324 SHLPSVGKNSSWSQLRQGY-----IPLEFCEGGS------SSLRSVTSQMLDEDPRLRLTAQ----ILTALNVIHSKL 386 (524)
T ss_pred cccccCCCCCCcccccccc-----CchhhhcCcc------hhhhhHHHHhcCcchhhhhHHH----HHhccccccchh
Confidence 7665443 1111111111 111111 111 1356699999999999999997 899999987543
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.51 E-value=8.1e-14 Score=143.86 Aligned_cols=142 Identities=19% Similarity=0.176 Sum_probs=95.6
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHH-------------------------------HH------
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR-------------------------------KK------ 132 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~-------------------------------~~------ 132 (517)
+.||.|++|.||+|+.+ +++.||||+.+......- ..
T Consensus 123 ~plasaSigQVh~A~l~------~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV------DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred cceeeeehhheEEEEec------CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 57999999999999986 467899999865321100 00
Q ss_pred HhHHHHHHHHHHhc----C-CCCccceeeee-ecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhc
Q 010140 133 LHRADMEKVILTML----D-HPFLPTLYAEF-EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYN 206 (517)
Q Consensus 133 ~~~~~~E~~il~~l----~-HpnIv~l~~~~-~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 206 (517)
.-.+.+|...+.++ . +++| .+-.++ ......+|||||++|++|.++...... .. .
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~--~--------------- 257 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL--D--------------- 257 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC--C---------------
Confidence 00234455555554 2 3433 222222 223456899999999999876543210 00 0
Q ss_pred CCccccccchhhhhhhHHHHHHHH-HHHHHHhcCceeccCCCCceEEccCCcEEeccCCCccccc
Q 010140 207 NLGFVHTDVTLFFNYRFYAAETLL-ALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270 (517)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~qi~~-aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~ 270 (517)
...++.+++. .+..+|..|++|+|+||.||+++.+|.++|+|||++..++
T Consensus 258 --------------~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 258 --------------RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred --------------HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 0134556655 4788999999999999999999999999999999987655
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.47 E-value=6.6e-14 Score=146.15 Aligned_cols=148 Identities=16% Similarity=0.164 Sum_probs=90.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-------------------------------HHH
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------------------RKK 132 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-------------------------------~~~ 132 (517)
.+|.. +.||+|++|.||+|+.++ +++.||||++++..... .+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~-----~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~ 193 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKD-----NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF 193 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECC-----CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence 45776 789999999999999986 57889999997542110 011
Q ss_pred HhHHHHHHHH------HHhc----CCCCccceeeeee-cCceeEEEEEecCCCchhHHH--HhCCCCccCccchhhhhhh
Q 010140 133 LHRADMEKVI------LTML----DHPFLPTLYAEFE-ASHYSCLVMEYCPGGDLYAAR--QRQPGKRFGISSAKFVFFL 199 (517)
Q Consensus 133 ~~~~~~E~~i------l~~l----~HpnIv~l~~~~~-~~~~~~lV~E~~~gg~L~~~l--~~~~~~~~~~~~~~~~~~~ 199 (517)
.+.+.+|+.+ +.++ .+.+.+.+-.++. -....+|||||++|+.|.++- ...+......
T Consensus 194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~l--------- 264 (537)
T PRK04750 194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLL--------- 264 (537)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHH---------
Confidence 1222233333 3332 1333233323332 134457999999999997642 2111000000
Q ss_pred hhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCC----cEEeccCCCccccc
Q 010140 200 LFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG----HIMLSDFDLSFKCD 270 (517)
Q Consensus 200 l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~----~vkL~DFGls~~~~ 270 (517)
....+..++.|+ +..|++|+|+||.||+++.+| .++++|||++..++
T Consensus 265 -----------------a~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 265 -----------------AERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----------------HHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 000112233443 468999999999999999888 99999999986654
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.46 E-value=2.9e-13 Score=121.93 Aligned_cols=128 Identities=20% Similarity=0.258 Sum_probs=94.9
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCc-cceeeeeecCceeEEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEFEASHYSCLV 167 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~~~~~~~~lV 167 (517)
++.|+.|.++.||+++.. ++.|++|+...... .......|+.+++.+.+.++ .+++.... ...++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv 69 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-------NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLI 69 (170)
T ss_pred eeecCCcccCceEEEEEC-------CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEE
Confidence 467899999999999864 36799999865421 11234568999999865554 45555443 335799
Q ss_pred EEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc-----ee
Q 010140 168 MEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI-----VY 242 (517)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i-----iH 242 (517)
|||++|.++.... .. . +.++.+++.+|+.||+.++ +|
T Consensus 70 ~e~i~G~~l~~~~---------~~-~----------------------------~~~~~~l~~~l~~LH~~~~~~~~~~H 111 (170)
T cd05151 70 TEFIEGSELLTED---------FS-D----------------------------PENLEKIAKLLKKLHSSPLPDLVPCH 111 (170)
T ss_pred EEecCCCcccccc---------cc-C----------------------------HHHHHHHHHHHHHHhCCCCCCceeec
Confidence 9999998875320 00 0 1345799999999999985 99
Q ss_pred ccCCCCceEEccCCcEEeccCCCccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
+|++|.||+++ ++.++++|||.+..
T Consensus 112 gD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 112 NDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCCCcCcEEEE-CCeEEEEecccccC
Confidence 99999999998 67899999999853
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=1.5e-13 Score=129.31 Aligned_cols=211 Identities=19% Similarity=0.234 Sum_probs=142.0
Q ss_pred HHHhcCCCCccceeeeeecCc-----eeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccch
Q 010140 142 ILTMLDHPFLPTLYAEFEASH-----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVT 216 (517)
Q Consensus 142 il~~l~HpnIv~l~~~~~~~~-----~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 216 (517)
-|-.+.|-|||+++.+|.+.. ...++.||+..|+|.++|++........
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~-------------------------- 173 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKAL-------------------------- 173 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhh--------------------------
Confidence 344567999999999997544 4789999999999999997743222111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhcC--ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCC
Q 010140 217 LFFNYRFYAAETLLALEYLHMMG--IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIP 294 (517)
Q Consensus 217 ~~~~~~~~~~qi~~aL~yLH~~~--iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (517)
....+++|+.||+.||.|||+.. |+|+.+..+-|++..+|-+|++--.....-.
T Consensus 174 ~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~------------------------ 229 (458)
T KOG1266|consen 174 FQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP------------------------ 229 (458)
T ss_pred hHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccch------------------------
Confidence 12335689999999999999985 9999999999999999988875322110000
Q ss_pred CCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCC
Q 010140 295 SCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH 374 (517)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~ 374 (517)
+ +... .......-.|-++|.|||.=.....
T Consensus 230 s---------------------------~~~~-----------------------~~~Ek~~~~~~~g~~a~~sg~~tn~ 259 (458)
T KOG1266|consen 230 S---------------------------VNST-----------------------REAEKSVNTSLPGFSAPESGTTTNT 259 (458)
T ss_pred h---------------------------hhhh-----------------------hHhhhhccccCCccccCCcCccccc
Confidence 0 0000 0001111236778999998766667
Q ss_pred CccchHHHHHHHHHHHhhCCCC-CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCC
Q 010140 375 GSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453 (517)
Q Consensus 375 ~~~~DiWSlGvil~elltG~~P-f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~ 453 (517)
+.++|||++|....+|..|..- -.+......-..+..... +..... -+++|.+||+-.|..||++.
T Consensus 260 ~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~-----~len~l-------qr~~i~kcl~~eP~~rp~ar- 326 (458)
T KOG1266|consen 260 TGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII-----GLENGL-------QRGSITKCLEGEPNGRPDAR- 326 (458)
T ss_pred ccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee-----eccCcc-------ccCcCcccccCCCCCCcchh-
Confidence 8899999999999999987654 333322221111211110 001110 25889999999999999998
Q ss_pred ChHHhhcCCCcCCCC
Q 010140 454 GSVEIKRHEFFKGIN 468 (517)
Q Consensus 454 ~~~ell~hp~f~~~~ 468 (517)
+++.||-.=.+.
T Consensus 327 ---~llfHpllfeVh 338 (458)
T KOG1266|consen 327 ---LLLFHPLLFEVH 338 (458)
T ss_pred ---hhhcCceeeecc
Confidence 999999865543
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=1e-13 Score=141.21 Aligned_cols=252 Identities=20% Similarity=0.249 Sum_probs=173.9
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc-CCCCccceeeeee
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE 159 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 159 (517)
..+.+|..+..||.|.|+.|+.+..+. ..+..|++|.+.+........+.. ..|+.+...+ .|.+++.++..|.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~----~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~ 336 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRP----EGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWS 336 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecC----CCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCcc
Confidence 345789999999999999999988552 256889999887654433333222 2366666666 5999999999999
Q ss_pred cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcC
Q 010140 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMG 239 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 239 (517)
...+.|+-.|||+++++...+... ..+.. ...+.+..|++.++.++|+..
T Consensus 337 ~~r~~~ip~e~~~~~s~~l~~~~~--~~~d~----------------------------~~~~~~~~q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 337 QLRQGYIPLEFCEGGSSSLRSVTS--QMLDE----------------------------DPRLRLTAQILTALNVIHSKL 386 (524)
T ss_pred ccccccCchhhhcCcchhhhhHHH--HhcCc----------------------------chhhhhHHHHHhccccccchh
Confidence 888999999999999886544111 11111 112356789999999999999
Q ss_pred ceeccCCCCceEEccC-CcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccc
Q 010140 240 IVYRDLKPENVLVRED-GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKK 318 (517)
Q Consensus 240 iiHrDLKp~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (517)
++|+|+||+||++..+ +..++.|||....+..
T Consensus 387 ~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~----------------------------------------------- 419 (524)
T KOG0601|consen 387 FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF----------------------------------------------- 419 (524)
T ss_pred hhcccccccceeeccchhhhhccccccccccce-----------------------------------------------
Confidence 9999999999999886 7789999998632110
Q ss_pred ccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcc--cchhhcCCCCCccchHHHHHHHHHHHhhCCCC
Q 010140 319 KAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYL--APEVISGQGHGSAVDWWTLGVFLYEMLYGTTP 396 (517)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~--APE~l~~~~~~~~~DiWSlGvil~elltG~~P 396 (517)
......++-.++ +++......+..++|++|||..+.+.++|...
T Consensus 420 ----------------------------------~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 420 ----------------------------------SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred ----------------------------------ecccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 001112233333 55555556689999999999999999988654
Q ss_pred CCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCc
Q 010140 397 FKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464 (517)
Q Consensus 397 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f 464 (517)
-.... ....+..+...... ... .+++.+...++..++..|+.+. ++..|.=|
T Consensus 466 s~~~~---~~~~i~~~~~p~~~--~~~-------~~~q~~~kv~~~~~~~~~~l~~----~l~~~~~~ 517 (524)
T KOG0601|consen 466 SESGV---QSLTIRSGDTPNLP--GLK-------LQLQVLLKVMINPDRKRRPSAV----ELSLHSEF 517 (524)
T ss_pred Ccccc---cceeeecccccCCC--chH-------HhhhhhhhhhcCCccccchhhh----hhcccchh
Confidence 32221 11222222221111 111 2478899999999999999987 77777544
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.39 E-value=2.2e-12 Score=132.76 Aligned_cols=116 Identities=20% Similarity=0.153 Sum_probs=89.0
Q ss_pred CCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccc
Q 010140 113 PQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISS 192 (517)
Q Consensus 113 ~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~ 192 (517)
.+.+|.|.+.+.... .......+-+.-|+.++||||+++++.++..+.+|||+|.+. .|..++....
T Consensus 36 ~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-------- 102 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-------- 102 (690)
T ss_pred cCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH--------
Confidence 445566666544322 223334446778999999999999999999999999999984 5666665542
Q ss_pred hhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHH-hcCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 193 AKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLH-MMGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 193 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH-~~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
.. .+...+.||+.||.||| +.+++|++|.-+-|+|+..|..||++|-++
T Consensus 103 ~~-------------------------~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v 152 (690)
T KOG1243|consen 103 KE-------------------------EVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELV 152 (690)
T ss_pred HH-------------------------HHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence 00 11245789999999998 568999999999999999999999999886
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.32 E-value=1.5e-11 Score=111.94 Aligned_cols=144 Identities=17% Similarity=0.110 Sum_probs=94.6
Q ss_pred eeeeccceeEEEEEEEecCC-CCCCCceeeeeecchHHHH-------H------------HHHHhH----HHHHHHHHHh
Q 010140 90 RRLGSGDIGNVYLCQIRNPM-VGLPQCFYAMKVVDREALA-------I------------RKKLHR----ADMEKVILTM 145 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~-~~~~~~~vAiK~i~~~~~~-------~------------~~~~~~----~~~E~~il~~ 145 (517)
..||.|-=+.||.|...+.. ....+..+|||+.+..... . ...... .++|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999754310 0012468999997532110 0 001112 2379999999
Q ss_pred cC--CCCccceeeeeecCceeEEEEEecCCCchhHH-HHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhh
Q 010140 146 LD--HPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA-RQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYR 222 (517)
Q Consensus 146 l~--HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~-l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 222 (517)
+. .-++.+.+++ ..-+|||||+.++.+..- +... .+.. .+..
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~----------------------------~~~~ 127 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLND----------------------------EEMK 127 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCH----------------------------HHHH
Confidence 85 3567777765 456899999965444211 1110 0110 0112
Q ss_pred HHHHHHHHHHHHH-HhcCceeccCCCCceEEccCCcEEeccCCCcccc
Q 010140 223 FYAAETLLALEYL-HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 269 (517)
Q Consensus 223 ~~~~qi~~aL~yL-H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~ 269 (517)
.+..|++.+|..| |..||||+||++.|||+. ++.+.|+|||.+-..
T Consensus 128 ~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 128 NAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 4568999999999 899999999999999996 578999999988543
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=2.8e-11 Score=106.42 Aligned_cols=134 Identities=22% Similarity=0.188 Sum_probs=99.1
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeec-----chHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCcee
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVV-----DREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i-----~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 164 (517)
..+++|+-+.+|.+...+ ..+.+|.- ....+..+-...+..+|..++.++.--.|..-+=++.+.+..
T Consensus 2 ~~i~~GAEa~i~~~~~~g-------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNG 74 (204)
T ss_pred chhhCCcceeEEeeeccC-------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Confidence 357889999999986653 23455542 223334444556777899999998765655544455566777
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
.|+|||++|-.|.+.+.... -.+++.+=.-+.-||..||||+|
T Consensus 75 ~I~me~I~G~~lkd~l~~~~-------------------------------------~~~~r~vG~~vg~lH~~givHGD 117 (204)
T COG3642 75 LIVMEYIEGELLKDALEEAR-------------------------------------PDLLREVGRLVGKLHKAGIVHGD 117 (204)
T ss_pred EEEEEEeCChhHHHHHHhcc-------------------------------------hHHHHHHHHHHHHHHhcCeecCC
Confidence 89999999888887876641 03457777888899999999999
Q ss_pred CCCCceEEccCCcEEeccCCCccc
Q 010140 245 LKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 245 LKp~NILl~~~~~vkL~DFGls~~ 268 (517)
|.++||++...+ +.++|||++..
T Consensus 118 LTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 118 LTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CccceEEEeCCc-EEEEECCcccc
Confidence 999999997655 99999999853
No 445
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.23 E-value=1.1e-10 Score=102.08 Aligned_cols=145 Identities=21% Similarity=0.139 Sum_probs=104.5
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeee-----cchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeecCc
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKV-----VDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~-----i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 162 (517)
.+..|-+|+-+.|+++.+.+ +.+.||. .+...+...-..++..+|+++|.++.--.|.--.=+|.+..
T Consensus 11 ~l~likQGAEArv~~~~~~G-------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSG-------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY 83 (229)
T ss_pred cceeeeccceeeEeeeccCC-------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 66788999999999998764 4455554 33344444455677788999999987556554444566667
Q ss_pred eeEEEEEecCC-CchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCce
Q 010140 163 YSCLVMEYCPG-GDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIV 241 (517)
Q Consensus 163 ~~~lV~E~~~g-g~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ii 241 (517)
.-+|+|||++| .++.+++.......... +. ...++++|-..|.-||.++||
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d-~~---------------------------~~~~~~~iG~~igklH~ndii 135 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDESED-EG---------------------------LAELARRIGELIGKLHDNDII 135 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCcccc-hh---------------------------HHHHHHHHHHHHHHhhhCCee
Confidence 77899999966 37777776643221111 11 124567888889999999999
Q ss_pred eccCCCCceEEccCC---cEEeccCCCcc
Q 010140 242 YRDLKPENVLVREDG---HIMLSDFDLSF 267 (517)
Q Consensus 242 HrDLKp~NILl~~~~---~vkL~DFGls~ 267 (517)
|+||..+||++..+| .+.++|||++.
T Consensus 136 HGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 136 HGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred cccccccceEEecCCCcCceEEEeecchh
Confidence 999999999997655 45899999984
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=2.5e-10 Score=107.40 Aligned_cols=83 Identities=23% Similarity=0.188 Sum_probs=61.0
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCC--CCccceeeeeecC---cee
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH--PFLPTLYAEFEAS---HYS 164 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~~~~~~~---~~~ 164 (517)
+.||.|.++.||++...+ ++.|++|+....... .....+..|+.+++.+.+ .++.+++.+.... +..
T Consensus 4 ~~l~~G~~n~~~~v~~~~------g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~ 75 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG------GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTP 75 (223)
T ss_pred eecCCCccceEEEEEecC------CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCc
Confidence 578999999999998642 367999998654321 123456679999999965 4467778777654 367
Q ss_pred EEEEEecCCCchhHHH
Q 010140 165 CLVMEYCPGGDLYAAR 180 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l 180 (517)
|+||||++|.+|...+
T Consensus 76 ~~v~e~i~G~~l~~~~ 91 (223)
T cd05154 76 FYVMERVDGRVLRDRL 91 (223)
T ss_pred eEEEEEeCCEecCCCC
Confidence 8999999998886643
No 447
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=6.6e-11 Score=122.48 Aligned_cols=174 Identities=19% Similarity=0.276 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHhc-CceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcc
Q 010140 226 AETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVL 304 (517)
Q Consensus 226 ~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (517)
.+++.||.|+|.. ++||+.|.|++|.++.+|..||+.|+++........+....++
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd----------------------- 162 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYD----------------------- 162 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCC-----------------------
Confidence 4677999999976 8999999999999999999999999987332221111100000
Q ss_pred ccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHH
Q 010140 305 SCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLG 384 (517)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlG 384 (517)
.....-..-...|.|||++.+...+.++|++|+|
T Consensus 163 ----------------------------------------------~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG 196 (700)
T KOG2137|consen 163 ----------------------------------------------PPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLG 196 (700)
T ss_pred ----------------------------------------------CCCChhhccCcccccchhhccccccccccceeee
Confidence 0000111234579999999998889999999999
Q ss_pred HHHHHHh-hCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCC
Q 010140 385 VFLYEML-YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463 (517)
Q Consensus 385 vil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~ 463 (517)
|++|.+. .|+.-+.+......+ ............... -..+.++++=|.++|..++..||++. +++.-||
T Consensus 197 ~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~~~~~~s----~~~p~el~~~l~k~l~~~~~~rp~~~----~l~~~~f 267 (700)
T KOG2137|consen 197 VLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNAGAFGYS----NNLPSELRESLKKLLNGDSAVRPTLD----LLLSIPF 267 (700)
T ss_pred eEEEEEecCCcchhhccCCcchh-hhhhccccccccccc----ccCcHHHHHHHHHHhcCCcccCcchh----hhhcccc
Confidence 9999999 556656554332222 221111111111111 12223589999999999999999887 8999999
Q ss_pred cCCCCcccccCCCC
Q 010140 464 FKGINWALIRSIKP 477 (517)
Q Consensus 464 f~~~~~~~~~~~~p 477 (517)
|.+.--..++...+
T Consensus 268 f~D~~~~aLrfLD~ 281 (700)
T KOG2137|consen 268 FSDPGLKALRFLDD 281 (700)
T ss_pred cCCchhhhhhhccc
Confidence 99987777766543
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.01 E-value=4.2e-09 Score=101.33 Aligned_cols=104 Identities=18% Similarity=0.019 Sum_probs=74.8
Q ss_pred HHHHHHHHHhcCCCCc--cceeeeeec-----CceeEEEEEecCCC-chhHHHHhCCCCccCccchhhhhhhhhhhhhcC
Q 010140 136 ADMEKVILTMLDHPFL--PTLYAEFEA-----SHYSCLVMEYCPGG-DLYAARQRQPGKRFGISSAKFVFFLLFFFFYNN 207 (517)
Q Consensus 136 ~~~E~~il~~l~HpnI--v~l~~~~~~-----~~~~~lV~E~~~gg-~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 207 (517)
+.+|...+.+|..-+| +.++.+++. ....+||||++++. +|.+++...........
T Consensus 75 a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~---------------- 138 (268)
T PRK15123 75 ADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPR---------------- 138 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHH----------------
Confidence 5678888888854333 344445543 23578999999876 78888754211111111
Q ss_pred CccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEcc-------CCcEEeccCCCcc
Q 010140 208 LGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-------DGHIMLSDFDLSF 267 (517)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-------~~~vkL~DFGls~ 267 (517)
..+.++.+++..+.-||..||+|+|+++.|||++. ++.+.|+||+.+.
T Consensus 139 ------------~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 139 ------------LKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred ------------HHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 11356789999999999999999999999999975 4689999999874
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.97 E-value=5.3e-09 Score=94.93 Aligned_cols=128 Identities=23% Similarity=0.193 Sum_probs=77.7
Q ss_pred EEEEEEEecCCCCCCCceeeeeecchHHH-----------------------HHHHHHhHHHHHHHHHHhcCCC--Cccc
Q 010140 99 NVYLCQIRNPMVGLPQCFYAMKVVDREAL-----------------------AIRKKLHRADMEKVILTMLDHP--FLPT 153 (517)
Q Consensus 99 ~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~-----------------------~~~~~~~~~~~E~~il~~l~Hp--nIv~ 153 (517)
.||.|...+ +..+|||+.+.... ..........+|.+.|.++..- ++.+
T Consensus 1 ~Vy~~~~~~------~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~ 74 (188)
T PF01163_consen 1 DVYHAIDPD------GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPK 74 (188)
T ss_dssp EEEEEEECT------TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--
T ss_pred CEEEEECCC------CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence 378887653 56788888653211 0111234566799999999755 5677
Q ss_pred eeeeeecCceeEEEEEecC--CCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHH
Q 010140 154 LYAEFEASHYSCLVMEYCP--GGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLA 231 (517)
Q Consensus 154 l~~~~~~~~~~~lV~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 231 (517)
++++. .-+|||||++ |..+..+.... +... ....++.+++..
T Consensus 75 p~~~~----~~~ivME~I~~~G~~~~~l~~~~----~~~~----------------------------~~~~~~~~il~~ 118 (188)
T PF01163_consen 75 PYDYN----RNVIVMEYIGEDGVPLPRLKDVD----LSPE----------------------------EPKELLEEILEE 118 (188)
T ss_dssp EEEEE----TTEEEEE--EETTEEGGCHHHCG----GGGS----------------------------THHHHHHHHHHH
T ss_pred EEEEe----CCEEEEEecCCCccchhhHHhcc----ccch----------------------------hHHHHHHHHHHH
Confidence 77553 3469999997 55554332211 0001 112456788885
Q ss_pred HHH-HHhcCceeccCCCCceEEccCCcEEeccCCCcccc
Q 010140 232 LEY-LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 269 (517)
Q Consensus 232 L~y-LH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~ 269 (517)
+.. +|..||||+||.+.|||++.+ .+.|+|||.+...
T Consensus 119 ~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 119 IIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp HHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred HHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence 555 579999999999999999877 8999999988543
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.82 E-value=6e-08 Score=97.55 Aligned_cols=146 Identities=17% Similarity=0.104 Sum_probs=99.5
Q ss_pred eEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCccceeeeeec----CceeEEEEEecCC
Q 010140 98 GNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA----SHYSCLVMEYCPG 173 (517)
Q Consensus 98 G~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~lV~E~~~g 173 (517)
.+.|+|.... ++..|++|.+.-.......+ ...-+++++++.|+|||++.++|.. +.-++||++|.++
T Consensus 290 ~Ttyk~~s~~-----DG~~YvLkRlhg~r~~~~nk---~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 290 ITTYKATSNV-----DGNAYVLKRLHGDRDQSTNK---DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred ceeEeeeecc-----CCceeeeeeeccccccCccc---chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 4678887765 78889999994332221111 1124678999999999999999973 4468999999886
Q ss_pred -CchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEE
Q 010140 174 -GDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLV 252 (517)
Q Consensus 174 -g~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl 252 (517)
++|.++.-......-.... .-++......+..+..|+.||..||.++|+.|+.-+-|.|.+||+
T Consensus 362 s~TL~d~~F~~~~~t~~~n~---------------~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv 426 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNS---------------FYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV 426 (655)
T ss_pred CchHHHHHccCCcccccccc---------------ccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe
Confidence 5676653322111100000 001122223334455789999999999999999999999999999
Q ss_pred ccCCcEEeccCCCc
Q 010140 253 REDGHIMLSDFDLS 266 (517)
Q Consensus 253 ~~~~~vkL~DFGls 266 (517)
+.+.+++|..-|..
T Consensus 427 ~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 427 TGKMRIRISGCGIM 440 (655)
T ss_pred eCcceEEEecccce
Confidence 99888888877654
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.77 E-value=4.8e-08 Score=91.31 Aligned_cols=136 Identities=25% Similarity=0.241 Sum_probs=96.2
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-------------------HHHHhHHHHHHHHHHhc
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------RKKLHRADMEKVILTML 146 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-------------------~~~~~~~~~E~~il~~l 146 (517)
+.++..||-|.=|.||.|... .+..+|||.-+-..... .-.....++|..+|.+|
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L 166 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRL 166 (304)
T ss_pred HhhccccccCccceEEEEECC------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHh
Confidence 457789999999999999876 36789999743221110 01123456789999999
Q ss_pred CCC--CccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHH
Q 010140 147 DHP--FLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFY 224 (517)
Q Consensus 147 ~Hp--nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 224 (517)
... .|.+.+++ +..++||||++|-.|..... ..... ..+
T Consensus 167 ~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~-------~~en~----------------------------~~i 207 (304)
T COG0478 167 YPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLRL-------DVENP----------------------------DEI 207 (304)
T ss_pred hhcCCCCCCcccc----ccceeeeehcccceeecccC-------cccCH----------------------------HHH
Confidence 655 67777654 45679999999877754321 11111 133
Q ss_pred HHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 225 AAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 225 ~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
+..|+.-+.-+-..||||+|+.+=|||++.+|.+.++||--+
T Consensus 208 l~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~ 249 (304)
T COG0478 208 LDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQA 249 (304)
T ss_pred HHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCccc
Confidence 455555555555899999999999999999999999999865
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.76 E-value=1.3e-07 Score=87.87 Aligned_cols=126 Identities=27% Similarity=0.164 Sum_probs=86.4
Q ss_pred CCceeeeeecchHHH----HHHHHHhHHHHHHHHHHhcCCCC--ccceeeeeecC----ceeEEEEEecCCC-chhHHHH
Q 010140 113 PQCFYAMKVVDREAL----AIRKKLHRADMEKVILTMLDHPF--LPTLYAEFEAS----HYSCLVMEYCPGG-DLYAARQ 181 (517)
Q Consensus 113 ~~~~vAiK~i~~~~~----~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~~~~~----~~~~lV~E~~~gg-~L~~~l~ 181 (517)
..+.|-+|....... ...-...+..+|...+..|..-. +++.+.+.+.. ...+||+|+++|. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 446677775432211 11122345667888888875333 45566665542 2458999999884 7888877
Q ss_pred hCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCC---cE
Q 010140 182 RQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG---HI 258 (517)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~---~v 258 (517)
.... ..... .+.++.+++..+.-||.+||+|+|+++.|||++.++ .+
T Consensus 111 ~~~~--~~~~~----------------------------~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~ 160 (206)
T PF06293_consen 111 QWEQ--LDPSQ----------------------------RRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRF 160 (206)
T ss_pred hhcc--cchhh----------------------------HHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeE
Confidence 6321 11111 135678999999999999999999999999999887 89
Q ss_pred EeccCCCccc
Q 010140 259 MLSDFDLSFK 268 (517)
Q Consensus 259 kL~DFGls~~ 268 (517)
.|+||+.++.
T Consensus 161 ~lIDld~~~~ 170 (206)
T PF06293_consen 161 YLIDLDRMRF 170 (206)
T ss_pred EEEcchhcee
Confidence 9999998754
No 453
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.74 E-value=1.6e-07 Score=86.09 Aligned_cols=140 Identities=19% Similarity=0.194 Sum_probs=92.3
Q ss_pred cCCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHH------HHHHHHHHhcCC---CCc
Q 010140 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA------DMEKVILTMLDH---PFL 151 (517)
Q Consensus 81 ~~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~------~~E~~il~~l~H---pnI 151 (517)
+..++|.+++.+-......|.+.... ++.+.+|..+.........+..+ .+++..+.++.. -..
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~-------~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~ 100 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEID-------GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEP 100 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEEC-------CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccc
Confidence 34578999999999888888877643 47899999876543322222222 223333333322 222
Q ss_pred cceeeeee-----cCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHH
Q 010140 152 PTLYAEFE-----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAA 226 (517)
Q Consensus 152 v~l~~~~~-----~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (517)
..++-+.+ -....+|||||++|..|.+...-. . .+..
T Consensus 101 ~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------e--------------------------------~~~~ 142 (229)
T PF06176_consen 101 ADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------E--------------------------------DLAE 142 (229)
T ss_pred ccceeeeeeeeccceeEEEEEEEEecCeecccchhcC------H--------------------------------HHHH
Confidence 23222222 223456999999998886542110 0 1235
Q ss_pred HHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 227 ETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 227 qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
.|+.++.-||+.|+.|+|..|.|++++.++ ++++||+..
T Consensus 143 ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~~k 181 (229)
T PF06176_consen 143 KIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQGK 181 (229)
T ss_pred HHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECccc
Confidence 678899999999999999999999998655 999999875
No 454
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=1.7e-07 Score=92.14 Aligned_cols=149 Identities=21% Similarity=0.254 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCC
Q 010140 223 FYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQP 302 (517)
Q Consensus 223 ~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (517)
+.++.|+.+.+-||..|.+-+|+.++|+|+++++.|.|.|-..-..+.
T Consensus 121 rvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~-------------------------------- 168 (637)
T COG4248 121 RVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA-------------------------------- 168 (637)
T ss_pred HHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeecc--------------------------------
Confidence 678999999999999999999999999999999999998854221110
Q ss_pred ccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhc-----CCCCCcc
Q 010140 303 VLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-----GQGHGSA 377 (517)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~-----~~~~~~~ 377 (517)
.+......+|.+.|.+||.-. +..-+..
T Consensus 169 -----------------------------------------------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~ 201 (637)
T COG4248 169 -----------------------------------------------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTAN 201 (637)
T ss_pred -----------------------------------------------CCceEecccCccccCCHHHhccccccccCCCcc
Confidence 011123347999999999865 2334678
Q ss_pred chHHHHHHHHHHHhhC-CCCCCCCC-------hHHHHHHHhcCCC------CCCCCCCCCchhHH-hhhhHHHHHHHhcc
Q 010140 378 VDWWTLGVFLYEMLYG-TTPFKGEN-------NEKTLINILKKPL------TFPRIGVSSSKEFE-EVVKLQDLISKLLV 442 (517)
Q Consensus 378 ~DiWSlGvil~elltG-~~Pf~~~~-------~~~~~~~i~~~~~------~~p~~~~~~~~~~~-~~~~l~dLi~~~L~ 442 (517)
.|.|.|||++|+++.| +.||.|.. +.+ ..|..+.+ ..+....+....|. ..+.++.|..+|+.
T Consensus 202 hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E--~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~ 279 (637)
T COG4248 202 HDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE--TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFT 279 (637)
T ss_pred ccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch--hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhc
Confidence 9999999999999986 99998642 112 12221111 00111111111122 22457888888886
Q ss_pred CC--cccccCCC
Q 010140 443 KN--PKKRIGSL 452 (517)
Q Consensus 443 ~d--P~~R~t~~ 452 (517)
.- +.-||+++
T Consensus 280 ~~~~~~~RP~a~ 291 (637)
T COG4248 280 ESGVATPRPTAK 291 (637)
T ss_pred ccCCCCCCCCHH
Confidence 53 56899973
No 455
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.59 E-value=1.6e-08 Score=103.85 Aligned_cols=286 Identities=18% Similarity=0.203 Sum_probs=179.1
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC-ccceeeeeecCce
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHY 163 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~ 163 (517)
-+.....+++|+++.+++.+... .+....+.+... .....++++|.+++||| .+..++-++.+.+
T Consensus 243 ws~~fh~fvK~altknpKkRpta------eklL~h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~ 308 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTA------EKLLQHPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDY 308 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCCh------hhheeceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccc
Confidence 46667788999999999887553 233346666443 11223788999999999 7888888888899
Q ss_pred eEEEEEecCCC-chhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCcee
Q 010140 164 SCLVMEYCPGG-DLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVY 242 (517)
Q Consensus 164 ~~lV~E~~~gg-~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiH 242 (517)
.+++|+++.++ +-.. .....+.. .-..+...+.+.-+++|+|||+.-=+|
T Consensus 309 ~~i~~~i~s~~rs~~~--------~~~~se~~---------------------~~~~~~~~~~r~et~~l~~l~~~~~~~ 359 (829)
T KOG0576|consen 309 LWIPMRICSTGRSSAL--------EMTVSEIA---------------------LEQYQFAYPLRKETRPLAELHSSYKVH 359 (829)
T ss_pred cchhhhhhcCCccccc--------cCChhhHh---------------------hhhhhhhhhhhhhcccccccccccccC
Confidence 99999999776 2111 01111111 001112345667788999999988789
Q ss_pred ccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCcccccccccccccccccccc
Q 010140 243 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 322 (517)
Q Consensus 243 rDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (517)
|| ||+..+ +..++.||+....+..
T Consensus 360 ~d----~~l~s~-~~~~~~~~~v~~~L~~--------------------------------------------------- 383 (829)
T KOG0576|consen 360 RD----NILGSE-EEVKLLDFAVPPQLTR--------------------------------------------------- 383 (829)
T ss_pred cc----cccccc-cccccccccCCcccCc---------------------------------------------------
Confidence 99 887765 6789999998632221
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhCCCCCCCCCh
Q 010140 323 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402 (517)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~ 402 (517)
....+++.+|+.++|||+.....+....|+|++|+-..+|.-|.+|-...
T Consensus 384 ----------------------------~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P-- 433 (829)
T KOG0576|consen 384 ----------------------------TMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP-- 433 (829)
T ss_pred ----------------------------ccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC--
Confidence 00234567999999999999999999999999999888888887775441
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCCCChHHhhcCCCcCCCCcccccCCCCCCCCC
Q 010140 403 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPN 482 (517)
Q Consensus 403 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~~~~~ell~hp~f~~~~~~~~~~~~p~~~~~ 482 (517)
......+-.+. ..+..... ..|. ...-.++...|+..-|..|+... .++.|.+|++..- .+....+.+-|.
T Consensus 434 ~~~~~~~g~~p-~s~~L~~~--~aw~-~~~~~~~~~~~~~g~P~~pkv~m----gacfsKvfngCpl-~i~~aaswIhp~ 504 (829)
T KOG0576|consen 434 PAVLPMIGNGP-NSPMLTDK--SAWS-PVFHRDFPAPCLNGLPPTPKVHM----GACFSKVFNGCPL-RIHCAASWIHPS 504 (829)
T ss_pred ccccCCCCCCC-Cccccchh--hhcC-cccccCCcccccCCCCCCCcchh----hHHHHHHhccCcc-cceecccccCcc
Confidence 11111110110 00000000 0000 00112577889999999999887 8999999998643 233333332222
Q ss_pred ---CccccccccccccCCCCccccCCCCC
Q 010140 483 ---NDLYCKIKKKVYVPKLSKQERDAPYQ 508 (517)
Q Consensus 483 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (517)
..+.....+-.|.+.++......+.+
T Consensus 505 t~dq~ll~gaeegIy~lnlnel~e~~le~ 533 (829)
T KOG0576|consen 505 TRDQALLFGAEEGIYTLNLNELHEATLEK 533 (829)
T ss_pred hhhhHhhhhhccceeeccccccccccHhh
Confidence 23344455566666666544444333
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.52 E-value=6.8e-07 Score=81.78 Aligned_cols=140 Identities=12% Similarity=0.045 Sum_probs=92.7
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH---HHHHhHHHHHHHHHHhcCCCC--ccceeeeee---c--C
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI---RKKLHRADMEKVILTMLDHPF--LPTLYAEFE---A--S 161 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~~~---~--~ 161 (517)
-|+||.+-|+.....+ +.|-+|.-....... ..-...+.+|...|.+|..-+ +.+.. ++. . .
T Consensus 26 ~~rgG~SgV~r~~~~g-------~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~ 97 (216)
T PRK09902 26 YRRNGMSGVQCVERNG-------KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGE 97 (216)
T ss_pred cCCCCcceEEEEEeCC-------cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCc
Confidence 3568889999876554 357777654211110 122345677999888884322 44444 222 1 1
Q ss_pred ceeEEEEEecCC-CchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCc
Q 010140 162 HYSCLVMEYCPG-GDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGI 240 (517)
Q Consensus 162 ~~~~lV~E~~~g-g~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i 240 (517)
-..+||+|-+.| -||.+++......+.+.... +.++.+++..|.-||+.|+
T Consensus 98 ~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k----------------------------~~il~~va~~ia~LH~~Gv 149 (216)
T PRK09902 98 WRALLVTEDMAGFISIADWYAQHAVSPYSDEVR----------------------------QAMLKAVALAFKKMHSVNR 149 (216)
T ss_pred eEEEEEEEeCCCCccHHHHHhcCCcCCcchHHH----------------------------HHHHHHHHHHHHHHHHCCC
Confidence 236899998743 58887775543222222211 2467899999999999999
Q ss_pred eeccCCCCceEEccCCc--EEeccCCCcc
Q 010140 241 VYRDLKPENVLVREDGH--IMLSDFDLSF 267 (517)
Q Consensus 241 iHrDLKp~NILl~~~~~--vkL~DFGls~ 267 (517)
.|+|+-+.|||++.+|. ++++||--++
T Consensus 150 ~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 150 QHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred cCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 99999999999987777 9999998663
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.43 E-value=1.4e-06 Score=90.92 Aligned_cols=143 Identities=23% Similarity=0.206 Sum_probs=89.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH-------------------------------HHHHhH---
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------------------RKKLHR--- 135 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~-------------------------------~~~~~~--- 135 (517)
..|+.++-|.||+|+.++ ++.||||+.+.+-... .+..+.
T Consensus 131 ~PiAsASIaQVH~A~L~s------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 131 EPIASASIAQVHRAVLKS------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred CchhhhhHhhheeEEecC------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 578999999999999984 6899999987542110 000111
Q ss_pred ---HHHHHHHHHhc-----CCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcC
Q 010140 136 ---ADMEKVILTML-----DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNN 207 (517)
Q Consensus 136 ---~~~E~~il~~l-----~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 207 (517)
+.+|..-+.++ +.|+|.--.=+++-...-.|+|||++|..+.+...... .....
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~----------------- 266 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDR----------------- 266 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCH-----------------
Confidence 22344444444 23443221222333456689999999988877632211 11111
Q ss_pred CccccccchhhhhhhHHHHHHHHH-HHHHHhcCceeccCCCCceEEccCCcEEeccCCCccccc
Q 010140 208 LGFVHTDVTLFFNYRFYAAETLLA-LEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270 (517)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~qi~~a-L~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~ 270 (517)
+.++..++.+ +..+-..|+.|.|..|.||+++.+|++.+.|||+...++
T Consensus 267 --------------k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 267 --------------KELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred --------------HHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 1222222222 233345899999999999999999999999999986655
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.43 E-value=1e-06 Score=83.12 Aligned_cols=72 Identities=15% Similarity=0.099 Sum_probs=52.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC--ccceeeeeecCceeEEE
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF--LPTLYAEFEASHYSCLV 167 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~~~~~~~~~lV 167 (517)
..||+|..+.||++. +..+++|...... ....+.+|.++++.+..-. +.+.+++.+..+...+|
T Consensus 7 ~~i~~G~t~~~y~~~---------~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv 72 (226)
T TIGR02172 7 TQTGEGGNGESYTHK---------TGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLI 72 (226)
T ss_pred eeecCCCCcceeEec---------CCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeee
Confidence 578999999999841 2347788876532 1223456999999886433 56778888888888999
Q ss_pred EEecCCCc
Q 010140 168 MEYCPGGD 175 (517)
Q Consensus 168 ~E~~~gg~ 175 (517)
||+++|.+
T Consensus 73 ~e~i~G~~ 80 (226)
T TIGR02172 73 YELIVGKR 80 (226)
T ss_pred eeecCCcc
Confidence 99998864
No 459
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.36 E-value=4.9e-06 Score=75.54 Aligned_cols=128 Identities=26% Similarity=0.284 Sum_probs=90.2
Q ss_pred CCceEEeeeeccce-eEEEEEEEecCCCCCCCceeeeeecchH----------HHH--------HHHHHhHHHHHHHHHH
Q 010140 84 DHFRLLRRLGSGDI-GNVYLCQIRNPMVGLPQCFYAMKVVDRE----------ALA--------IRKKLHRADMEKVILT 144 (517)
Q Consensus 84 ~~y~i~~~LG~G~f-G~Vy~~~~~~~~~~~~~~~vAiK~i~~~----------~~~--------~~~~~~~~~~E~~il~ 144 (517)
.+++.++.||.|.- |.||+++..+ +.||+|+...- ... ......-+..|.+...
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g-------~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfg 109 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDG-------RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFG 109 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECC-------eEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhH
Confidence 68999999999999 9999998764 79999993210 000 0123345677888766
Q ss_pred hc---CCCCc--cceeeeeecC------------------ceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhh
Q 010140 145 ML---DHPFL--PTLYAEFEAS------------------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLF 201 (517)
Q Consensus 145 ~l---~HpnI--v~l~~~~~~~------------------~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~ 201 (517)
+| .+.++ |+++||+.-. ....||.||++...- +.
T Consensus 110 RLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~-----------~~------------ 166 (207)
T PF13095_consen 110 RLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPP-----------LQ------------ 166 (207)
T ss_pred HHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCccc-----------cc------------
Confidence 66 45566 8999988321 113567777654330 00
Q ss_pred hhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 202 FFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
-.-+.+|.+-|..+|..||+-+|+|+.|.. .-||+|||.+
T Consensus 167 --------------------~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 167 --------------------IRDIPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred --------------------hhHHHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence 022478999999999999999999999987 2489999864
No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.34 E-value=6.4e-06 Score=76.50 Aligned_cols=140 Identities=21% Similarity=0.194 Sum_probs=89.5
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHH---------------------HhHHHHHHHHHHhcC-
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKK---------------------LHRADMEKVILTMLD- 147 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~---------------------~~~~~~E~~il~~l~- 147 (517)
..|..|.-+.||+|... .+..+|+|+.+......+.. ..-..+|..-|+++.
T Consensus 54 g~istGKEA~Vy~a~~~------~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~e 127 (268)
T COG1718 54 GCISTGKEANVYLAETG------DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYE 127 (268)
T ss_pred eeecCCcceEEEeeccC------CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36778888899999764 35789999987554322211 111345777777773
Q ss_pred -CCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHH
Q 010140 148 -HPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAA 226 (517)
Q Consensus 148 -HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (517)
+=.+.+-+.+.. -.|||||+.. ...- ...-+..+... .+...+..
T Consensus 128 AGVrvP~Pi~~~~----nVLvMEfIg~-~g~p---AP~LkDv~~e~--------------------------~e~~~~~~ 173 (268)
T COG1718 128 AGVRVPEPIAFRN----NVLVMEFIGD-DGLP---APRLKDVPLEL--------------------------EEAEGLYE 173 (268)
T ss_pred cCCCCCCceeecC----CeEEEEeccC-CCCC---CCCcccCCcCc--------------------------hhHHHHHH
Confidence 445556565543 3699999943 3110 00001111100 01234557
Q ss_pred HHHHHHHHHHh-cCceeccCCCCceEEccCCcEEeccCCCccccc
Q 010140 227 ETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270 (517)
Q Consensus 227 qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~vkL~DFGls~~~~ 270 (517)
++++.+.-|-. .++||+||..=|||+. ++.+.|+|||-|-...
T Consensus 174 ~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 174 DVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 88888887776 8999999999999998 8899999999885443
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.30 E-value=1e-05 Score=76.40 Aligned_cols=78 Identities=26% Similarity=0.338 Sum_probs=54.9
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC--Cccceeeeee---cCce
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP--FLPTLYAEFE---ASHY 163 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~~---~~~~ 163 (517)
++.|+.|..+.||++...+ ..+++|+.... .....+..|..+++.+... -+.+++.... ....
T Consensus 2 i~~l~~G~~n~~~~v~~~~-------~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~ 69 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-------GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGF 69 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-------SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSE
T ss_pred CccCCCCCeeeEEEEEECC-------cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccccccc
Confidence 5689999999999998653 57999998765 2233444588888888433 3566666442 3345
Q ss_pred eEEEEEecCCCchhH
Q 010140 164 SCLVMEYCPGGDLYA 178 (517)
Q Consensus 164 ~~lV~E~~~gg~L~~ 178 (517)
.+++|++++|..+..
T Consensus 70 ~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 70 PYLLMEYIPGRPLDD 84 (239)
T ss_dssp EEEEEEEESSEEHHH
T ss_pred ceEEEEEeccccccc
Confidence 799999999988776
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.27 E-value=6e-06 Score=78.95 Aligned_cols=76 Identities=17% Similarity=0.108 Sum_probs=52.8
Q ss_pred eeeccce-eEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCceeEEEE
Q 010140 91 RLGSGDI-GNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYSCLVM 168 (517)
Q Consensus 91 ~LG~G~f-G~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV~ 168 (517)
.|-.|.. ..||++... +..+.+|+..... ...+.+|+.+++.+. +--+.+++++...++..++||
T Consensus 5 ~~~~g~~~~~v~~~~~~-------~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 71 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-------NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLT 71 (244)
T ss_pred ecCCCCCcCeEEEEcCC-------CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEE
Confidence 3445555 789988643 2467888876542 223445888888883 444668888887777789999
Q ss_pred EecCCCchhHH
Q 010140 169 EYCPGGDLYAA 179 (517)
Q Consensus 169 E~~~gg~L~~~ 179 (517)
|+++|.+|...
T Consensus 72 e~i~G~~l~~~ 82 (244)
T cd05150 72 SAVPGVPAAAL 82 (244)
T ss_pred EeeCCccHhHh
Confidence 99999877643
No 463
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.20 E-value=5.8e-06 Score=90.98 Aligned_cols=204 Identities=22% Similarity=0.253 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHhcCCCCccceeeeeecCce----eEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCc
Q 010140 134 HRADMEKVILTMLDHPFLPTLYAEFEASHY----SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLG 209 (517)
Q Consensus 134 ~~~~~E~~il~~l~HpnIv~l~~~~~~~~~----~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 209 (517)
...+.|...+.++.|+|++.++.+--.... +.+..|+|..-++...++.... .+
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~--i~-------------------- 284 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS--IP-------------------- 284 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc--cC--------------------
Confidence 334457788888999999999887744322 2345577877777776655321 11
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHHhcCceeccCCCC---ceEEccCCcEEec--cCCCcccccccccccCCcchHHH
Q 010140 210 FVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRDLKPE---NVLVREDGHIMLS--DFDLSFKCDVVPKLLRPKLSFEA 284 (517)
Q Consensus 210 ~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~---NILl~~~~~vkL~--DFGls~~~~~~~~~~~~~~~~~~ 284 (517)
....|.+..+++.||+|+|+....|.-|-.. +-..+..+.+.++ ||+.++.......
T Consensus 285 --------~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~---------- 346 (1351)
T KOG1035|consen 285 --------LETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK---------- 346 (1351)
T ss_pred --------HHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCccc----------
Confidence 1123567899999999999996555544444 3333455556665 7776644332111
Q ss_pred HhhhcccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcc
Q 010140 285 IEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYL 364 (517)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 364 (517)
.....-+..+.
T Consensus 347 ---------------------------------------------------------------------~~~~~~~~~~~ 357 (1351)
T KOG1035|consen 347 ---------------------------------------------------------------------SFSDLLAEIRN 357 (1351)
T ss_pred ---------------------------------------------------------------------chhhcCccccc
Confidence 11123445678
Q ss_pred cchhhcCCCCCc--cchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCchhHHhhhhHHHHHHHhcc
Q 010140 365 APEVISGQGHGS--AVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLV 442 (517)
Q Consensus 365 APE~l~~~~~~~--~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~dLi~~~L~ 442 (517)
++|......+.. ..|+|.+|.....+..|..+-.... ....++... ... ...+++.+|+.
T Consensus 358 ~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~---~~~~~l~~~---------~~~------~~~d~~~~~~~ 419 (1351)
T KOG1035|consen 358 ADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA---VPVSLLDVL---------STS------ELLDALPKCLD 419 (1351)
T ss_pred cccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc---chhhhhccc---------cch------hhhhhhhhhcc
Confidence 888887666544 4699999999999988765532211 111111110 000 26789999999
Q ss_pred CCcccccCCCCChHHhhcCCCcCCCC
Q 010140 443 KNPKKRIGSLKGSVEIKRHEFFKGIN 468 (517)
Q Consensus 443 ~dP~~R~t~~~~~~ell~hp~f~~~~ 468 (517)
.++++|+.+. +++.|+|.+.-.
T Consensus 420 ~~~~~Rl~~~----~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 420 EDSEERLSAL----ELLTHPFLRFPT 441 (1351)
T ss_pred hhhhhccchh----hhhhchhccccc
Confidence 9999999998 999999987543
No 464
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.10 E-value=1.4e-05 Score=70.22 Aligned_cols=129 Identities=26% Similarity=0.277 Sum_probs=91.1
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCcc-ceeeeeecCcee
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLP-TLYAEFEASHYS 164 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv-~l~~~~~~~~~~ 164 (517)
.++.+.||+|++|.||+|.+++ ..+|+|+-+.+ .....+..|+++|..+.-.++. ++|.+-.+
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~~-------~~~a~Kvrr~d-----s~r~~l~kEakiLeil~g~~~~p~vy~yg~~---- 87 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWRG-------GEVALKVRRRD-----SPRRNLEKEAKILEILAGEGVTPEVYFYGED---- 87 (201)
T ss_pred hhhhhhhhcccccEEEEeeccC-------ceEEEEEecCC-----cchhhHHHHHHHHHHhhhcCCCceEEEechh----
Confidence 4567889999999999999875 47899987665 2345566699999999876664 55554433
Q ss_pred EEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhcCceecc
Q 010140 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMMGIVYRD 244 (517)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~iiHrD 244 (517)
++.|||+.|-.|.+.-... . ++-+..++.+---|-..||-|..
T Consensus 88 ~i~me~i~G~~L~~~~~~~--------~-----------------------------rk~l~~vlE~a~~LD~~GI~H~E 130 (201)
T COG2112 88 FIRMEYIDGRPLGKLEIGG--------D-----------------------------RKHLLRVLEKAYKLDRLGIEHGE 130 (201)
T ss_pred hhhhhhhcCcchhhhhhcc--------c-----------------------------HHHHHHHHHHHHHHHHhccchhh
Confidence 3559999888886653321 0 12234555664445667999999
Q ss_pred CC-CCceEEccCCcEEeccCCCcc
Q 010140 245 LK-PENVLVREDGHIMLSDFDLSF 267 (517)
Q Consensus 245 LK-p~NILl~~~~~vkL~DFGls~ 267 (517)
|. |..++|..++.+.|+||.-|+
T Consensus 131 l~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 131 LSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hcCCceeEEecCCcEEEEEccchh
Confidence 96 565666566699999999884
No 465
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.01 E-value=4.2e-05 Score=72.72 Aligned_cols=75 Identities=13% Similarity=0.118 Sum_probs=46.8
Q ss_pred Eeeeecccee-EEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC---CccceeeeeecC---
Q 010140 89 LRRLGSGDIG-NVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP---FLPTLYAEFEAS--- 161 (517)
Q Consensus 89 ~~~LG~G~fG-~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~~~~~~~--- 161 (517)
++.|+.|+.. .||+.. ..+++|+..... ....+.+|.++|..+... -+.++++.....
T Consensus 2 ~~~~~~gG~~n~vy~~~----------~~~VlR~~~~~~-----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~ 66 (235)
T cd05155 2 IEPVDSGGTDNATFRLG----------DDMSVRLPSAAG-----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGY 66 (235)
T ss_pred ceeccCCCcccceEEcC----------CceEEEcCCccc-----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCC
Confidence 3567777776 499762 136788765432 123566699999887532 344555444332
Q ss_pred ceeEEEEEecCCCchhH
Q 010140 162 HYSCLVMEYCPGGDLYA 178 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~~ 178 (517)
...|+|||+++|.++..
T Consensus 67 ~~~~~l~~~i~G~~l~~ 83 (235)
T cd05155 67 PWPWSVYRWLEGETATA 83 (235)
T ss_pred CcceEEEEeecCCCCCc
Confidence 24589999999988753
No 466
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.91 E-value=0.00019 Score=71.12 Aligned_cols=164 Identities=17% Similarity=0.189 Sum_probs=85.7
Q ss_pred CCCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC--Cccceeeee-
Q 010140 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP--FLPTLYAEF- 158 (517)
Q Consensus 82 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~- 158 (517)
.++....++.++.|....||++...+ ..+++|+..... ....+..|..++..|... .|++++...
T Consensus 20 ~~~~~~~i~~~~~G~~n~~y~v~t~~-------~~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~ 87 (307)
T TIGR00938 20 DLGELLSLKGIAEGVENSNYLLTTDV-------GRYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRD 87 (307)
T ss_pred CCCCceeccccCCccccceEEEEeCC-------CcEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCC
Confidence 44556668888889888999986432 357889875421 112233466777776322 244444321
Q ss_pred -----ecCceeEEEEEecCCCchhH-----------H---HHhCCCCccCccch---hhhhhhhhhhhhcCCccccccch
Q 010140 159 -----EASHYSCLVMEYCPGGDLYA-----------A---RQRQPGKRFGISSA---KFVFFLLFFFFYNNLGFVHTDVT 216 (517)
Q Consensus 159 -----~~~~~~~lV~E~~~gg~L~~-----------~---l~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~ 216 (517)
..++..++||||++|..+.. . +.... ..++.... ..-.|.. +..... .. .
T Consensus 88 g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~-~~~~~~~~~~~~~~~w~~--~~~~~~----~~-~ 159 (307)
T TIGR00938 88 GRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAG-AHFPENRKNSLRLEAWHI--LAEKCF----EA-A 159 (307)
T ss_pred CCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhh-ccCCCCCCCCCChHHHHH--HHHhhh----hc-c
Confidence 23456789999999865421 0 11100 11111000 0000000 000000 00 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHh-------cCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 217 LFFNYRFYAAETLLALEYLHM-------MGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 217 ~~~~~~~~~~qi~~aL~yLH~-------~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
... -......+...++++.. .++||+|+.+.||+++.++.+.|+||+.+
T Consensus 160 ~~l-~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~ 215 (307)
T TIGR00938 160 PQL-EAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFA 215 (307)
T ss_pred ccc-CHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccc
Confidence 000 00112223344555542 58999999999999998887789999987
No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.88 E-value=0.00011 Score=69.75 Aligned_cols=77 Identities=23% Similarity=0.361 Sum_probs=49.4
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCccceeeeeecCceeEEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYSCLV 167 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV 167 (517)
++.|..|-...||++...+. .++.|++|+...... ......+|..+++.+. +.-+++++..+.. .+|
T Consensus 3 i~~l~gG~tN~~~~v~~~~~----~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l 70 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKED----NQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQN----GLI 70 (235)
T ss_pred EEEcCCcccceEEEEEcCCC----CCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEE
Confidence 45788888899999864420 136788998754311 1122335888898884 3334566554432 389
Q ss_pred EEecCCCchh
Q 010140 168 MEYCPGGDLY 177 (517)
Q Consensus 168 ~E~~~gg~L~ 177 (517)
|||++|.++.
T Consensus 71 ~e~i~G~~l~ 80 (235)
T cd05157 71 YEFIPGRTLE 80 (235)
T ss_pred EEeeCCCcCC
Confidence 9999997763
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.88 E-value=8.6e-05 Score=77.51 Aligned_cols=139 Identities=21% Similarity=0.209 Sum_probs=84.9
Q ss_pred eeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH----------------------------HHHHhH------
Q 010140 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----------------------------RKKLHR------ 135 (517)
Q Consensus 90 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~----------------------------~~~~~~------ 135 (517)
+.||.-+.|.||+|+.++ ++.||||+-+..-... .+..+.
T Consensus 167 ~piaaASlaQVhrA~L~~------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred chhhhcchhheEEEEecC------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 689999999999999985 6889999976432110 000111
Q ss_pred HHHHHH----HHHhcCCCC------ccceeeeeecCceeEEEEEecCCCchhHH--HHhCCCCccCccchhhhhhhhhhh
Q 010140 136 ADMEKV----ILTMLDHPF------LPTLYAEFEASHYSCLVMEYCPGGDLYAA--RQRQPGKRFGISSAKFVFFLLFFF 203 (517)
Q Consensus 136 ~~~E~~----il~~l~Hpn------Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~--l~~~~~~~~~~~~~~~~~~~l~~~ 203 (517)
+.+|.+ +.+.+.|-+ |.++|- .-...-.|+||||+|.-+.+. +.+.+-...
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~--------------- 303 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKRGISPH--------------- 303 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHcCCCHH---------------
Confidence 222332 222334555 444332 223456899999999877654 333221111
Q ss_pred hhcCCccccccchhhhhhhHHHHHHHHH-HHHHHhcCceeccCCCCceEEcc----CCcEEeccCCCccccc
Q 010140 204 FYNNLGFVHTDVTLFFNYRFYAAETLLA-LEYLHMMGIVYRDLKPENVLVRE----DGHIMLSDFDLSFKCD 270 (517)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~qi~~a-L~yLH~~~iiHrDLKp~NILl~~----~~~vkL~DFGls~~~~ 270 (517)
.++.-+.++ ++-|=..|++|+|=.|.||+++. ++.+.+-|||+...+.
T Consensus 304 -------------------~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 304 -------------------DILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred -------------------HHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 122233332 22233578999999999999984 6689999999986554
No 469
>PLN02876 acyl-CoA dehydrogenase
Probab=97.86 E-value=0.00015 Score=81.53 Aligned_cols=84 Identities=20% Similarity=0.322 Sum_probs=57.2
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC-CCCc--cceeeeeecC---
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFL--PTLYAEFEAS--- 161 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnI--v~l~~~~~~~--- 161 (517)
-++.|+.|.++.+|+....... ....+++|+....... .....+.+|..+|+.+. |++| .+++.++.+.
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~---~~~~~VLR~~p~~~~~--~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~ 116 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGG---SVKRYVLRKKPPGKLL--QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVI 116 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCC---cceeEEEEeCCCCccC--ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcC
Confidence 4678899999999998765311 1235777776543211 11234667999999995 6765 7778777654
Q ss_pred ceeEEEEEecCCCch
Q 010140 162 HYSCLVMEYCPGGDL 176 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L 176 (517)
+..|+||||++|..+
T Consensus 117 G~~flVME~v~G~~~ 131 (822)
T PLN02876 117 GTAFYIMEYLEGRIF 131 (822)
T ss_pred CCceEEEEecCCccc
Confidence 467899999987654
No 470
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.83 E-value=0.00019 Score=65.88 Aligned_cols=131 Identities=19% Similarity=0.191 Sum_probs=86.5
Q ss_pred EeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH-------------HHHHHhHHHHHHHHHHhcC------CC
Q 010140 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA-------------IRKKLHRADMEKVILTMLD------HP 149 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~-------------~~~~~~~~~~E~~il~~l~------Hp 149 (517)
...||+|+.=.||.-- .....+||+....... .........+|+.....+. +.
T Consensus 6 ~~~i~~G~~R~cy~HP--------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~ 77 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP--------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWS 77 (199)
T ss_pred CcccccCCCceEEECC--------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccc
Confidence 3469999999999632 2234688988766500 0011234444655544444 88
Q ss_pred CccceeeeeecCceeEEEEEecCCC------chhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhH
Q 010140 150 FLPTLYAEFEASHYSCLVMEYCPGG------DLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRF 223 (517)
Q Consensus 150 nIv~l~~~~~~~~~~~lV~E~~~gg------~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 223 (517)
+|.+++|+.+.+...-+|+|.+.+. +|.+++.... +.. .
T Consensus 78 ~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~--------------------------------~ 122 (199)
T PF10707_consen 78 HIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE--------------------------------E 122 (199)
T ss_pred ccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH--------------------------------H
Confidence 9999999999999999999987542 4566654321 111 1
Q ss_pred HHHHHHHHHHHHHhcCceeccCCCCceEEccCC----cEEecc
Q 010140 224 YAAETLLALEYLHMMGIVYRDLKPENVLVREDG----HIMLSD 262 (517)
Q Consensus 224 ~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~----~vkL~D 262 (517)
+...+-.-.+||-+.+|+.+||+|.||++.... .+.|+|
T Consensus 123 ~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 123 LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 123334445788999999999999999996432 577887
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.82 E-value=0.00042 Score=70.41 Aligned_cols=82 Identities=18% Similarity=0.174 Sum_probs=54.9
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH--H--HHHHhHHHHHHHHHHhcC---CCCccceeeeee
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--I--RKKLHRADMEKVILTMLD---HPFLPTLYAEFE 159 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~--~--~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~ 159 (517)
.-.+.||.|.+..||++...+ .++.+.||.-...... . .-...+...|.+.|..+. -.++++++.+
T Consensus 29 ~~~~elggGn~N~VyrV~~~~-----g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~-- 101 (401)
T PRK09550 29 LTAREIGDGNLNLVFRVSDTE-----GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY-- 101 (401)
T ss_pred ceeeEcCCCceEEEEEEEeCC-----CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--
Confidence 345789999999999998764 2247899985422110 0 113345666888888762 3467788776
Q ss_pred cCceeEEEEEecCCCc
Q 010140 160 ASHYSCLVMEYCPGGD 175 (517)
Q Consensus 160 ~~~~~~lV~E~~~gg~ 175 (517)
+....++||||+++..
T Consensus 102 D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 102 DEELAVTVMEDLSDHK 117 (401)
T ss_pred CCCCCEEEEecCCCcc
Confidence 3455789999998744
No 472
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.74 E-value=0.00036 Score=68.78 Aligned_cols=161 Identities=16% Similarity=0.120 Sum_probs=85.3
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC--Cccceeee----
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP--FLPTLYAE---- 157 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~---- 157 (517)
.+..-++.|..|....+|++...+ ..+++|+.... ....+..|+.++..+.+- .+.+++..
T Consensus 14 ~~~~~i~~i~~G~~n~~y~v~~~~-------~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~ 80 (296)
T cd05153 14 GELLSFEGISAGIENTNYFVTTDS-------GRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGE 80 (296)
T ss_pred CchhheecccCccccceEEEEeCC-------CcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCc
Confidence 344457788889888999986432 46889987641 112344478888887432 24454432
Q ss_pred --eecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccc---cchhhhh-----------h
Q 010140 158 --FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHT---DVTLFFN-----------Y 221 (517)
Q Consensus 158 --~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~-----------~ 221 (517)
...++..++|++|++|..+... .......+...|..+-....++... .....+. .
T Consensus 81 ~~~~~~~~~~~l~~~i~G~~~~~~---------~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (296)
T cd05153 81 YLSELAGKPAALVEFLAGEHLTRP---------TAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLS 151 (296)
T ss_pred EeeeeCCceEEEEEeCCCCCCCCC---------CHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccC
Confidence 2334567899999998775320 0000000000000000000000000 0000000 0
Q ss_pred hHHHHHHHHHHHHHHh-------cCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 222 RFYAAETLLALEYLHM-------MGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 222 ~~~~~qi~~aL~yLH~-------~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
......+..++.++.. .++||+|+.|.|||++.++.+.|+||+.+
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a 203 (296)
T cd05153 152 AEDRALLADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFA 203 (296)
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhh
Confidence 0111223344444443 47999999999999998877789999987
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.68 E-value=0.00015 Score=69.79 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=44.8
Q ss_pred eeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC-ccceeeeeecCceeEEEEEe
Q 010140 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHYSCLVMEY 170 (517)
Q Consensus 92 LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~lV~E~ 170 (517)
+..|-.+.+|+... .++.+++|+........ . -...+|..+++.+..-. ..+++.... -++||||
T Consensus 4 ~~~G~tn~~y~~~~-------~~~~~vlR~~~~~~~~~--~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~ 69 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-------PGISFVWRPQSPVCKAL--G-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEW 69 (256)
T ss_pred CCCcCcCCeEEEEe-------CCccEEEeeCCcccccc--c-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEe
Confidence 55688889998863 24568888865432110 0 12345888999885433 345554432 2699999
Q ss_pred cCCCchh
Q 010140 171 CPGGDLY 177 (517)
Q Consensus 171 ~~gg~L~ 177 (517)
++|..+.
T Consensus 70 i~G~~~~ 76 (256)
T TIGR02721 70 LEGEVIT 76 (256)
T ss_pred ccCcccc
Confidence 9987653
No 474
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.66 E-value=0.00027 Score=69.85 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=50.4
Q ss_pred EeeeeccceeEEEEEEEecCC-CCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC-ccceeeeeecCceeEE
Q 010140 89 LRRLGSGDIGNVYLCQIRNPM-VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHYSCL 166 (517)
Q Consensus 89 ~~~LG~G~fG~Vy~~~~~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~l 166 (517)
++.|..|-...||++...... ....++.|++|+..... .......+|..++..+.... ..++++.+.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence 456677777899988754210 00124678999976532 11223445888888885333 4566666643 36
Q ss_pred EEEecCCCchhH
Q 010140 167 VMEYCPGGDLYA 178 (517)
Q Consensus 167 V~E~~~gg~L~~ 178 (517)
|+||++|..+..
T Consensus 75 v~e~i~G~~l~~ 86 (302)
T cd05156 75 IEEFIPSRTLTT 86 (302)
T ss_pred hhheeCCCcCCH
Confidence 899999877743
No 475
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.59 E-value=1e-05 Score=91.04 Aligned_cols=205 Identities=10% Similarity=-0.007 Sum_probs=133.6
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH--HHHHhHHHHHHHHHHhcCCCCccceeeeeec
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI--RKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 160 (517)
...+++.=-+|.|.++ ++++.+. .-.-+.+|+.+.-.... +-..+....|+.-++...|+++...+.-...
T Consensus 1228 ~e~~EV~l~i~~~~~~---R~k~Lr~----kid~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~p 1300 (2724)
T KOG1826|consen 1228 MEHSEVNLGISNHFHF---RNKWLRS----KIDWFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPP 1300 (2724)
T ss_pred hhhhheeeecccceee---ccchHhh----hhceeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCC
Confidence 4556665555555544 4444331 11235666665433321 1112233345556667789999887765543
Q ss_pred --CceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHHHHHHHHHHHHHHhc
Q 010140 161 --SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFYAAETLLALEYLHMM 238 (517)
Q Consensus 161 --~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 238 (517)
+...|.+++||.+|++...+-+.....-+..+.- + .....+.+.+..-+|++
T Consensus 1301 s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~-v-------------------------~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1301 SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSP-V-------------------------HLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhch-H-------------------------HHHHHHHHhccchhhhc
Confidence 4457899999999999998876432222211111 0 01123437777777765
Q ss_pred C-----ceeccCCCCceEEccCCcEEeccCCCcccccccccccCCcchHHHHhhhcccCCCCCCCCCCCccccccccccc
Q 010140 239 G-----IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHG 313 (517)
Q Consensus 239 ~-----iiHrDLKp~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (517)
. .+|++||+-|.+|..+..+|++++|+.+....
T Consensus 1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp------------------------------------------ 1392 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP------------------------------------------ 1392 (2724)
T ss_pred ccCCccchhhhhhhhccceecCCcccccccccccccCc------------------------------------------
Confidence 2 78999999999999999999999999852111
Q ss_pred cccccccccccccccccCCCCCCccccCCccccccccccCCcccCCCCCcccchhhcCCCCCccchHHHHHHHHHHHhhC
Q 010140 314 KKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYG 393 (517)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~DiWSlGvil~elltG 393 (517)
........++++.|++|++...-.++.++|+|..|+.+|+...|
T Consensus 1393 ------------------------------------~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~ 1436 (2724)
T KOG1826|consen 1393 ------------------------------------VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG 1436 (2724)
T ss_pred ------------------------------------hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc
Confidence 01112345688899999999888888889999999999999988
Q ss_pred CCCCC
Q 010140 394 TTPFK 398 (517)
Q Consensus 394 ~~Pf~ 398 (517)
..+|-
T Consensus 1437 n~~fi 1441 (2724)
T KOG1826|consen 1437 NAYFI 1441 (2724)
T ss_pred cHHHH
Confidence 88874
No 476
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.58 E-value=0.00012 Score=70.60 Aligned_cols=135 Identities=19% Similarity=0.256 Sum_probs=92.9
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHH-----------------HH--hHHHHHHHHHHhc
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------------KL--HRADMEKVILTML 146 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-----------------~~--~~~~~E~~il~~l 146 (517)
+.++..||-|.-+.||.+-+.. +..+++|.-+-.....+. .+ -...+|...|+.|
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~------G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL 167 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEE------GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKAL 167 (465)
T ss_pred hhhccccccccccceEEEecCC------CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHH
Confidence 5688999999999999998773 567788865422211110 11 1244688888888
Q ss_pred C-CC-CccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhHH
Q 010140 147 D-HP-FLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRFY 224 (517)
Q Consensus 147 ~-Hp-nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 224 (517)
. |- -|.+.++ .+..|+|||++.|-.|.+..... .+ ..+
T Consensus 168 ~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v~--------d~----------------------------~~l 207 (465)
T KOG2268|consen 168 YERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHVE--------DP----------------------------PTL 207 (465)
T ss_pred HHcCCCCCCccc----ccceeeHHHhhcccceeeeeecC--------Ch----------------------------HHH
Confidence 4 32 2445444 35678999999998886542211 11 122
Q ss_pred HHHHHHHHHHHHhcCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 225 AAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 225 ~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
...+..-+.-|-.+|+||+|..-=||+++.++.++++||--.
T Consensus 208 y~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQm 249 (465)
T KOG2268|consen 208 YDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQM 249 (465)
T ss_pred HHHHHHHHHHHHHcCceecccchheeEEecCCCEEEeechHh
Confidence 344555567788999999999999999999999999999754
No 477
>PRK10593 hypothetical protein; Provisional
Probab=97.58 E-value=0.00061 Score=67.11 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=56.2
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCC---CCccceeeeeec-
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH---PFLPTLYAEFEA- 160 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~- 160 (517)
...-.+.||.|..+.||.....+ ..+.+|..+.. .....+..|...|+.|.- -.|.++++++..
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~~-------~~~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~ 82 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDSQ-------GNPMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE 82 (297)
T ss_pred hhheeeecCCccceeEEEEEcCC-------CCEEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC
Confidence 34456789999999999986543 24667775321 012355669999988843 367888887754
Q ss_pred --CceeEEEEEecCCCch
Q 010140 161 --SHYSCLVMEYCPGGDL 176 (517)
Q Consensus 161 --~~~~~lV~E~~~gg~L 176 (517)
.+..+||||+++|+++
T Consensus 83 ~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 83 QSPGPDVLLLERLRGVSV 100 (297)
T ss_pred CcCCCeEEEEeccCCEec
Confidence 3668999999998766
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.51 E-value=0.00041 Score=63.25 Aligned_cols=97 Identities=29% Similarity=0.395 Sum_probs=70.9
Q ss_pred HHHHHHhcCC-CCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchh
Q 010140 139 EKVILTMLDH-PFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTL 217 (517)
Q Consensus 139 E~~il~~l~H-pnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 217 (517)
|..+|+.+++ +++++++|++-. ++|.||...+++.... .....+ ...
T Consensus 9 E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~--~~l~~~--------------------------~~~ 56 (188)
T PF12260_consen 9 EPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIY--RPLSQF--------------------------LQS 56 (188)
T ss_pred HHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccc--cccccc--------------------------ccc
Confidence 8888888876 699999999832 5799999777664220 000000 001
Q ss_pred hhh-hhHHHHHHHHHHHHHHh---cCceeccCCCCceEEccCCcEEeccCCCcc
Q 010140 218 FFN-YRFYAAETLLALEYLHM---MGIVYRDLKPENVLVREDGHIMLSDFDLSF 267 (517)
Q Consensus 218 ~~~-~~~~~~qi~~aL~yLH~---~~iiHrDLKp~NILl~~~~~vkL~DFGls~ 267 (517)
.|. ..+++.+++..+++|+. ..+.-.|++|+|+.++.+|++|++|...+.
T Consensus 57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence 111 13689999999999998 358889999999999999999999998763
No 479
>PRK05231 homoserine kinase; Provisional
Probab=97.46 E-value=0.0017 Score=64.70 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=25.6
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
.++||+|+.|.|||++.+...-|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~ 215 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFA 215 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccc
Confidence 48999999999999986665689999987
No 480
>PLN02236 choline kinase
Probab=97.37 E-value=0.0042 Score=62.49 Aligned_cols=83 Identities=12% Similarity=0.014 Sum_probs=51.5
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCC-ccceeeeeecCcee
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHYS 164 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~ 164 (517)
..-+..|-.|-.-.+|++....... ...+.|.+|+..... ..... ...|..+++.+..-+ -.++++.+..+
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~-~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g--- 109 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEG-NLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG--- 109 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCC-CCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECCc---
Confidence 3344456568888999987543111 134678899886542 11122 245888998885433 34667776543
Q ss_pred EEEEEecCCCchh
Q 010140 165 CLVMEYCPGGDLY 177 (517)
Q Consensus 165 ~lV~E~~~gg~L~ 177 (517)
.|.||++|.+|.
T Consensus 110 -~v~efi~g~~l~ 121 (344)
T PLN02236 110 -RVEEFIHARTLS 121 (344)
T ss_pred -eEEEeeCCCCCC
Confidence 689999887764
No 481
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.22 E-value=0.0071 Score=59.94 Aligned_cols=28 Identities=25% Similarity=0.538 Sum_probs=25.1
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
.++||+|+.+.||+++. +.+.|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~ 214 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC 214 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence 47999999999999987 67899999976
No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.98 E-value=0.01 Score=57.66 Aligned_cols=29 Identities=31% Similarity=0.434 Sum_probs=24.8
Q ss_pred CceeccCCCCceEEccCCc-EEeccCCCcc
Q 010140 239 GIVYRDLKPENVLVREDGH-IMLSDFDLSF 267 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~-vkL~DFGls~ 267 (517)
.++|+|+.|.|||++.++. .-|+||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence 4899999999999997565 5699999874
No 483
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.93 E-value=0.005 Score=61.41 Aligned_cols=83 Identities=17% Similarity=0.164 Sum_probs=51.7
Q ss_pred eeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH----HHHHhHHHHHHHHHHhcC--CC-CccceeeeeecCce
Q 010140 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----RKKLHRADMEKVILTMLD--HP-FLPTLYAEFEASHY 163 (517)
Q Consensus 91 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~----~~~~~~~~~E~~il~~l~--Hp-nIv~l~~~~~~~~~ 163 (517)
.||.|.-..||++.... .++.++||.-....... .-...+...|..+|+... -| .++++|.+ +...
T Consensus 2 EigdGnlN~VfrV~~~~-----g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQE-----GDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEM 74 (370)
T ss_pred cCCCCceEEEEEEEcCC-----CCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--cccc
Confidence 58999999999998643 22568888765332211 122455566888887763 34 45565543 4455
Q ss_pred eEEEEEecCCC-chhHHH
Q 010140 164 SCLVMEYCPGG-DLYAAR 180 (517)
Q Consensus 164 ~~lV~E~~~gg-~L~~~l 180 (517)
..+|||+++.. .|.+.+
T Consensus 75 ~~~vMEdL~~~~ilR~~L 92 (370)
T TIGR01767 75 AVTVMEDLSHHKIARKGL 92 (370)
T ss_pred ceehHhhCccchHHHHHH
Confidence 66999999653 344444
No 484
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.90 E-value=0.00084 Score=68.52 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=61.2
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHhcCCCC---CCCCCCCCchhHHhhhhHHHHHHHhccCCcccccCCC
Q 010140 376 SAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT---FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 452 (517)
Q Consensus 376 ~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---~p~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~R~t~~ 452 (517)
+|+|||++|.++.++..|...+......+....+.+-... .........-.+++...+.++..+|+-..|..||...
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence 4999999999999999999988877666655555432111 0000000112234445678999999999999999876
Q ss_pred CChHHhhcCCCcCCC
Q 010140 453 KGSVEIKRHEFFKGI 467 (517)
Q Consensus 453 ~~~~ell~hp~f~~~ 467 (517)
++.+|+-|..+
T Consensus 190 ----~~~k~~i~~ev 200 (725)
T KOG1093|consen 190 ----ELSKRCSFTEV 200 (725)
T ss_pred ----HHhcCccHHHH
Confidence 88999888754
No 485
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.90 E-value=0.0066 Score=60.77 Aligned_cols=82 Identities=10% Similarity=0.152 Sum_probs=49.8
Q ss_pred CCceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCc-cceeeeeecCc
Q 010140 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEFEASH 162 (517)
Q Consensus 84 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~~~~~ 162 (517)
+..++. .|..|=...+|++...+... ....|.+|+...... ..-...+|..+++.+..-++ .++++++..+
T Consensus 15 ~~i~i~-~l~gGlTN~~~~v~~~~~~~--~~~~~v~Ri~g~~t~----~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G- 86 (330)
T PLN02421 15 SDFSVE-RISGGITNLLLKVSVKEENG--NEVSVTVRLFGPNTD----YVIDRERELQAIKYLSAAGFGAKLLGVFGNG- 86 (330)
T ss_pred CceEEE-EeCCcccceEEEEEecCCCC--CCceEEEEEecCCcC----eEechHHHHHHHHHHHhcCCCCceeEEeCCc-
Confidence 345554 44448778899987543211 134788998754321 11122348889988865444 4667666432
Q ss_pred eeEEEEEecCCCch
Q 010140 163 YSCLVMEYCPGGDL 176 (517)
Q Consensus 163 ~~~lV~E~~~gg~L 176 (517)
+|.+|++|.+|
T Consensus 87 ---~i~~fi~g~~l 97 (330)
T PLN02421 87 ---MIQSFINARTL 97 (330)
T ss_pred ---EeehhhcCCCC
Confidence 58999987765
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.75 E-value=0.012 Score=59.80 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=51.2
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHH----HHHhHHHHHHHHHHhcC---CCCccceeeeeec
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR----KKLHRADMEKVILTMLD---HPFLPTLYAEFEA 160 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~----~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~ 160 (517)
-.+.||.|.-..||++.... +.|+||.-........ ....+...|...|+.+. ..++.+++.+.+
T Consensus 36 ~~~eiggGn~N~VyrV~~~~-------~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de- 107 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSSS-------GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR- 107 (418)
T ss_pred eEEEcCCCceeeEEEEEcCC-------ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC-
Confidence 47789999999999987632 3588887652211000 12344445677776653 247888888776
Q ss_pred CceeEEEEEecCC
Q 010140 161 SHYSCLVMEYCPG 173 (517)
Q Consensus 161 ~~~~~lV~E~~~g 173 (517)
+..++|||++++
T Consensus 108 -d~~vlvME~L~~ 119 (418)
T PLN02756 108 -TMALIGMRYLEP 119 (418)
T ss_pred -CCCEEEEeecCC
Confidence 446789999977
No 487
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.36 E-value=0.05 Score=53.11 Aligned_cols=76 Identities=21% Similarity=0.185 Sum_probs=47.5
Q ss_pred ceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcC---CCCccceeeeeecCc
Q 010140 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD---HPFLPTLYAEFEASH 162 (517)
Q Consensus 86 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~ 162 (517)
.+-.+.|+.|....+|+... .++.|-||+-... ....+..|..-|+.|. --.+++.+.+....+
T Consensus 19 i~~~~~v~GG~i~~a~~~~~-------~~~~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~ 85 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLDT-------DGGSYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD 85 (288)
T ss_dssp --EEEEE--SSSSEEEEEET-------TS-EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS
T ss_pred eeeeEecCCCChhheEEEEC-------CCccEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC
Confidence 45667899999999999872 4578999987632 2345556888888873 445778899888777
Q ss_pred eeEEEEEecCCC
Q 010140 163 YSCLVMEYCPGG 174 (517)
Q Consensus 163 ~~~lV~E~~~gg 174 (517)
..||||||++.+
T Consensus 86 ~~fLlle~l~~~ 97 (288)
T PF03881_consen 86 DAFLLLEFLEMG 97 (288)
T ss_dssp CCEEEEE-----
T ss_pred CceEEEEeecCC
Confidence 789999999776
No 488
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.34 E-value=0.015 Score=54.19 Aligned_cols=29 Identities=34% Similarity=0.615 Sum_probs=20.9
Q ss_pred CceeccCCCCceEE-ccCCcEEeccCCCcc
Q 010140 239 GIVYRDLKPENVLV-REDGHIMLSDFDLSF 267 (517)
Q Consensus 239 ~iiHrDLKp~NILl-~~~~~vkL~DFGls~ 267 (517)
.++|.||.|.|||+ +.++.++|+||..|.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 58999999999999 888999999999874
No 489
>PTZ00384 choline kinase; Provisional
Probab=96.30 E-value=0.03 Score=57.06 Aligned_cols=86 Identities=15% Similarity=0.259 Sum_probs=49.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCC-CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCC-Cccceeeeeec
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMV-GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP-FLPTLYAEFEA 160 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp-nIv~l~~~~~~ 160 (517)
.++.++ +.|..|-...+|++....... ....+.|.+.+..... ...-.-.+|..+++.+... .-.++++.|..
T Consensus 50 ~~~i~i-~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~----~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~ 124 (383)
T PTZ00384 50 PEFIEI-KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYN----SLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD 124 (383)
T ss_pred cccEEE-EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCC----ceEeccHHHHHHHHHHHhCCCCCeEEEecCC
Confidence 344444 456568889999997543210 0011224444422110 1111223488999999644 44677777754
Q ss_pred CceeEEEEEecCCCchh
Q 010140 161 SHYSCLVMEYCPGGDLY 177 (517)
Q Consensus 161 ~~~~~lV~E~~~gg~L~ 177 (517)
++|.||++|-+|.
T Consensus 125 ----g~l~efIeGr~l~ 137 (383)
T PTZ00384 125 ----FTIQEWVEGNTMG 137 (383)
T ss_pred ----EEEEEEeccccCC
Confidence 5999999987764
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.09 E-value=0.01 Score=59.93 Aligned_cols=79 Identities=20% Similarity=0.316 Sum_probs=51.6
Q ss_pred EEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHH---HHHHhHHHHHHHHHHhcC--CC-CccceeeeeecC
Q 010140 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI---RKKLHRADMEKVILTMLD--HP-FLPTLYAEFEAS 161 (517)
Q Consensus 88 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~~E~~il~~l~--Hp-nIv~l~~~~~~~ 161 (517)
..+.||.|.-..||++.+.. .++.++||.-....... .-...|...|..+|+.+. -| +++++|.+ +.
T Consensus 33 ~~~eigdGnlN~VfrV~~~~-----~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~ 105 (409)
T PRK12396 33 QCKEIGDGNLNYVFRVWDEQ-----KNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DS 105 (409)
T ss_pred eeeEcCCCceEEEEEEeeCC-----CCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--Cc
Confidence 37789999999999998742 23568888754322110 112456666888888763 34 46666643 45
Q ss_pred ceeEEEEEecCC
Q 010140 162 HYSCLVMEYCPG 173 (517)
Q Consensus 162 ~~~~lV~E~~~g 173 (517)
....+|||+++.
T Consensus 106 e~~~~vMEdL~~ 117 (409)
T PRK12396 106 VMNCCVMEDLSD 117 (409)
T ss_pred HHhhHHHHhCcc
Confidence 566799999965
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.98 E-value=0.094 Score=51.95 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=26.9
Q ss_pred CceeccCCCCceEEccCCcEEeccCCCcc
Q 010140 239 GIVYRDLKPENVLVREDGHIMLSDFDLSF 267 (517)
Q Consensus 239 ~iiHrDLKp~NILl~~~~~vkL~DFGls~ 267 (517)
++||+|+.+.|||++.++.+.++||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 79999999999999999999999999873
No 492
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.89 E-value=0.063 Score=52.88 Aligned_cols=38 Identities=18% Similarity=0.338 Sum_probs=31.4
Q ss_pred HHHHHHhc--------CceeccCCCCceEEccCCcEEeccCCCccc
Q 010140 231 ALEYLHMM--------GIVYRDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 231 aL~yLH~~--------~iiHrDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
-..+|+.+ .++|+|+++.||+|+..+-+=+.||+++..
T Consensus 183 ~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l 228 (321)
T COG3173 183 LIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL 228 (321)
T ss_pred HHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence 35566654 489999999999999988899999999843
No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.87 E-value=0.073 Score=52.93 Aligned_cols=42 Identities=40% Similarity=0.529 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhc--------C--ceeccCCCCceEEccCCc-EEeccCCCc
Q 010140 225 AAETLLALEYLHMM--------G--IVYRDLKPENVLVREDGH-IMLSDFDLS 266 (517)
Q Consensus 225 ~~qi~~aL~yLH~~--------~--iiHrDLKp~NILl~~~~~-vkL~DFGls 266 (517)
..++...++.+.+. + +||+|+.|.||+++.+.. +.++||+-+
T Consensus 174 ~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa 226 (331)
T COG2334 174 RAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDA 226 (331)
T ss_pred HHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccc
Confidence 34555555555543 3 999999999999998874 899999987
No 494
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.79 E-value=0.067 Score=53.02 Aligned_cols=143 Identities=24% Similarity=0.221 Sum_probs=85.0
Q ss_pred eEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHH----------------------HHHH-HhHHHHHHHHH
Q 010140 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA----------------------IRKK-LHRADMEKVIL 143 (517)
Q Consensus 87 ~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~----------------------~~~~-~~~~~~E~~il 143 (517)
.+-..|..|--+.||.|... .+..+|||+.+..-+. .+.. .--.+.|++-|
T Consensus 147 ~inGCiSTGKEANVYHat~~------dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNL 220 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEE------DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNL 220 (520)
T ss_pred ecccccccCccceeEeeecC------CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHH
Confidence 35566788999999998765 4567999997532110 0111 11234577888
Q ss_pred HhcCCCCccceeeeeecCceeEEEEEecCCCchhHHHHhCCCCccCccchhhhhhhhhhhhhcCCccccccchhhhhhhH
Q 010140 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFVFFLLFFFFYNNLGFVHTDVTLFFNYRF 223 (517)
Q Consensus 144 ~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 223 (517)
++++...|.----. .- ....|||+|+ |++=.-. ...+.. .+....++.
T Consensus 221 kRl~~aGIP~PePI-lL-k~hVLVM~Fl-Grdgw~a---PkLKd~--------------------------~ls~~ka~~ 268 (520)
T KOG2270|consen 221 KRLNNAGIPCPEPI-LL-KNHVLVMEFL-GRDGWAA---PKLKDA--------------------------SLSTSKARE 268 (520)
T ss_pred HHHHhcCCCCCCce-ee-ecceEeeeec-cCCCCcC---cccccc--------------------------cCChHHHHH
Confidence 88865554321111 11 2346999999 4332110 000111 111122334
Q ss_pred HHHHHHHHHHHH-HhcCceeccCCCCceEEccCCcEEeccCCCccc
Q 010140 224 YAAETLLALEYL-HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 224 ~~~qi~~aL~yL-H~~~iiHrDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
+-.|++.-+.-| |..++||.||.-=|+|+ .+|.+.|+|-+-+-.
T Consensus 269 ~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~lyiIDVSQSVE 313 (520)
T KOG2270|consen 269 LYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGKLYIIDVSQSVE 313 (520)
T ss_pred HHHHHHHHHHHHHHHhceeccchhhhhheE-ECCEEEEEEcccccc
Confidence 556666666665 45689999999999998 578899999987743
No 495
>PTZ00296 choline kinase; Provisional
Probab=95.26 E-value=0.18 Score=52.37 Aligned_cols=86 Identities=13% Similarity=0.155 Sum_probs=53.1
Q ss_pred CCCceEEeeeeccceeEEEEEEEecCCC---CCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhcCCCCc-cceeeee
Q 010140 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMV---GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEF 158 (517)
Q Consensus 83 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~---~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~ 158 (517)
.++. -++.|..|=.-.+|++....... ...++.|.+++.-.... .+-....|..+++.+..-+| .++++.+
T Consensus 105 ~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te----~lIdR~~E~~v~~~ls~~gi~P~l~~~f 179 (442)
T PTZ00296 105 EDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVD----ELYNPISEFEVYKTMSKYRIAPQLLNTF 179 (442)
T ss_pred cccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcc----ceeCHHHHHHHHHHHHHCCCCCceEEEe
Confidence 3455 66777778888999997653211 11246788998755421 11122348888888864444 3666666
Q ss_pred ecCceeEEEEEecCCCchh
Q 010140 159 EASHYSCLVMEYCPGGDLY 177 (517)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~ 177 (517)
.. +.|.||++|.+|.
T Consensus 180 ~g----g~I~efi~g~~l~ 194 (442)
T PTZ00296 180 SG----GRIEEWLYGDPLR 194 (442)
T ss_pred CC----CEEEEeeCCccCC
Confidence 42 4689999987553
No 496
>PRK06148 hypothetical protein; Provisional
Probab=95.25 E-value=0.16 Score=58.54 Aligned_cols=30 Identities=30% Similarity=0.409 Sum_probs=25.7
Q ss_pred cCceeccCCCCceEEccCC--cEE-eccCCCcc
Q 010140 238 MGIVYRDLKPENVLVREDG--HIM-LSDFDLSF 267 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~--~vk-L~DFGls~ 267 (517)
+++||.|+.+.|||++.++ ++. |+|||-+.
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 4799999999999999775 555 99999864
No 497
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=95.12 E-value=0.13 Score=50.40 Aligned_cols=80 Identities=15% Similarity=0.114 Sum_probs=49.6
Q ss_pred eccceeEEEEEEEec--C-CCCCCCceeeeeecchHHHH--HHHHHhHHHHHHHHHHhcC-------------CCCccce
Q 010140 93 GSGDIGNVYLCQIRN--P-MVGLPQCFYAMKVVDREALA--IRKKLHRADMEKVILTMLD-------------HPFLPTL 154 (517)
Q Consensus 93 G~G~fG~Vy~~~~~~--~-~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~-------------HpnIv~l 154 (517)
|.|-.|.+|+++... . ........+.||........ .......+.+|+.+.+.+- ...+.++
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~ 81 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC 81 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence 778889999987754 1 12224567899998733221 1223456777887665441 1245666
Q ss_pred eeeeecCceeEEEEEecC
Q 010140 155 YAEFEASHYSCLVMEYCP 172 (517)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~ 172 (517)
+..-.+....+||||-+.
T Consensus 82 ~~~~~~~~~~~lvlEDL~ 99 (294)
T PF02958_consen 82 YYADEDPGDEVLVLEDLS 99 (294)
T ss_pred EEeccCCCceeeehhhhh
Confidence 666655557899999763
No 498
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.06 E-value=0.29 Score=45.50 Aligned_cols=80 Identities=25% Similarity=0.287 Sum_probs=54.5
Q ss_pred CceEEeeeeccceeEEEEEEEecCCCCCCCceeeeeecchHHHHHHHHHhHHHHHHHHHHhc---CCCCccceeeeeecC
Q 010140 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEAS 161 (517)
Q Consensus 85 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~~ 161 (517)
+.+-.+.+.-|.--..|...+. ...|-+|+-... ....+..|+.-|..| +--+|.+++.+....
T Consensus 17 ~i~er~~v~gG~inea~~v~dg-------~~~~FvK~n~~~------~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~ 83 (286)
T COG3001 17 EIKEREEVSGGDINEAWRLRDG-------TDPFFVKCNQRE------QLSMFTAEADGLELLARSNTITVPKVIAVGASR 83 (286)
T ss_pred hhhcccccCCccccceeEeecC-------CcceEEEecchh------hHHHHHHHHHHHHHHHhcCCccccceEEecCCC
Confidence 3344455666666666666543 356788876543 344555677666666 345678888898999
Q ss_pred ceeEEEEEecCCCchh
Q 010140 162 HYSCLVMEYCPGGDLY 177 (517)
Q Consensus 162 ~~~~lV~E~~~gg~L~ 177 (517)
++.||||||++-|.+.
T Consensus 84 ~~sylVle~L~~~~~d 99 (286)
T COG3001 84 DHSYLVLEYLPTGPLD 99 (286)
T ss_pred CeeEEEEeeccCCCCC
Confidence 9999999999987664
No 499
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.97 E-value=0.3 Score=48.76 Aligned_cols=27 Identities=30% Similarity=0.336 Sum_probs=23.5
Q ss_pred cCceeccCCCCceEEccCCcEEeccCCCc
Q 010140 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266 (517)
Q Consensus 238 ~~iiHrDLKp~NILl~~~~~vkL~DFGls 266 (517)
.++||+|+.+.|||++ + .+.|+||+-+
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~ 222 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDA 222 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCC
Confidence 4789999999999995 4 5789999987
No 500
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.39 E-value=0.08 Score=52.40 Aligned_cols=43 Identities=28% Similarity=0.389 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhc-CceeccCCCCceEEccCCcEEeccCCCccc
Q 010140 225 AAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLSFK 268 (517)
Q Consensus 225 ~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~vkL~DFGls~~ 268 (517)
+.+.+.-++-+..+ ..=|||+...||||+ +|+|.|+||-+++.
T Consensus 327 f~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 327 FWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred HHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 34544444444433 588999999999999 99999999999863
Done!