Query 010143
Match_columns 517
No_of_seqs 34 out of 36
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 20:49:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010143.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010143hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2elba1 a.238.1.1 (A:6-273) DC 97.7 2E-05 1.5E-09 70.7 7.0 100 1-102 124-226 (268)
2 d1i4da_ a.238.1.2 (A:) Arfapti 97.6 2.7E-05 1.9E-09 65.4 5.6 90 2-91 107-199 (200)
3 d1urua_ a.238.1.1 (A:) Amphiph 97.6 8.1E-05 5.9E-09 63.2 8.5 102 2-103 110-214 (217)
4 d2d4ca1 a.238.1.1 (A:11-247) E 97.2 0.00014 9.9E-09 62.9 5.3 91 2-98 145-235 (237)
5 d1y74a1 a.194.1.1 (A:17-73) Li 31.1 9.3 0.00068 28.5 1.6 13 4-16 39-51 (57)
6 d1y2oa1 a.238.1.3 (A:1-248) BA 24.9 1E+02 0.0073 25.9 7.6 26 76-101 205-230 (248)
7 d1uptb_ a.193.1.1 (B:) Golgi a 17.1 24 0.0017 26.3 1.4 28 9-49 9-37 (58)
8 d1iq8a1 c.1.20.1 (A:6-360) Arc 15.0 28 0.002 32.5 1.7 39 58-96 316-354 (355)
9 d2gsca1 a.29.16.1 (A:9-125) Un 13.0 45 0.0033 25.9 2.2 34 74-107 56-89 (117)
10 d1oqpa_ a.39.1.5 (A:) Caltract 11.6 49 0.0036 23.3 1.9 24 28-52 1-24 (77)
No 1
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=2e-05 Score=70.72 Aligned_cols=100 Identities=15% Similarity=0.231 Sum_probs=81.7
Q ss_pred CchhhhhHHHHHHHHHHHHHhhcCCCCCCCCcc--chHHHHHHHHHHHHhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q 010143 1 MKRQCDEKRNVCEYVMAQQREKGKSKSGKGESV--SLQQQLQAANDEYEEEARLCVFRLKSLKQGQYRSLLTQAARHHAA 78 (517)
Q Consensus 1 MKrQCDeKR~vYE~M~a~qkEKGrsk~~KgEs~--s~q~QLqaA~~EY~EEAtLfvFRLKSLKQGQ~rSLLTQAARHHAA 78 (517)
+|+.+|..++-|+.+++.|....+.|. .|.. -..++|.+++..|+..+-=+++.|..|..++-.-+|........|
T Consensus 124 ~kk~fek~~~~yd~~l~k~~~~~k~k~--~~~~~~Ea~~~l~~~r~~f~~~~~d~~~~l~~l~~~k~~~~l~~l~~~~~a 201 (268)
T d2elba1 124 LKEVFQIASNDHDAAINRYSRLSKKRE--NDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQA 201 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCC--cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478899999999999988876544332 2211 123489999999999999999999999999999999999999999
Q ss_pred HHHhHHhhccch-hhhhhHHHHHHh
Q 010143 79 QLNFFRKGFKSL-EAVDTHVRLVAE 102 (517)
Q Consensus 79 QL~fFrkgLKsL-EavEPHVk~vaE 102 (517)
|++||++|+..| +.++|.++-+.+
T Consensus 202 ~~~ff~~~~~~l~~~l~~~~~~l~~ 226 (268)
T d2elba1 202 QISFFKMGSENLNEQLEEFLANIGT 226 (268)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 789999877654
No 2
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.64 E-value=2.7e-05 Score=65.41 Aligned_cols=90 Identities=23% Similarity=0.254 Sum_probs=72.5
Q ss_pred chhhhhHHHHHHHHHHHHHhhcCC---CCCCCCccchHHHHHHHHHHHHhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q 010143 2 KRQCDEKRNVCEYVMAQQREKGKS---KSGKGESVSLQQQLQAANDEYEEEARLCVFRLKSLKQGQYRSLLTQAARHHAA 78 (517)
Q Consensus 2 KrQCDeKR~vYE~M~a~qkEKGrs---k~~KgEs~s~q~QLqaA~~EY~EEAtLfvFRLKSLKQGQ~rSLLTQAARHHAA 78 (517)
++.+|.+|.-|+..+..+....+. .....+-...+.+++.|+.+|+.-...++..|..|.+++.+-++.|-...+.|
T Consensus 107 ~kk~~~~~~dyd~~~~k~~~~~~~~~~~~~~~kl~~ae~~~~~a~~~fe~~~~~~~~~l~~l~~~r~~~~~~~l~~~~~~ 186 (200)
T d1i4da_ 107 VKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNA 186 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 567899999999998776543222 22222334466799999999999999999999999999999999999999999
Q ss_pred HHHhHHhhccchh
Q 010143 79 QLNFFRKGFKSLE 91 (517)
Q Consensus 79 QL~fFrkgLKsLE 91 (517)
|+.||..|.+.||
T Consensus 187 ~~~f~~~~~~~le 199 (200)
T d1i4da_ 187 VSAYFAGNQKQLE 199 (200)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999887
No 3
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.62 E-value=8.1e-05 Score=63.16 Aligned_cols=102 Identities=15% Similarity=0.068 Sum_probs=80.1
Q ss_pred chhhhhHHHHHHHHHHHHH---hhcCCCCCCCCccchHHHHHHHHHHHHhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q 010143 2 KRQCDEKRNVCEYVMAQQR---EKGKSKSGKGESVSLQQQLQAANDEYEEEARLCVFRLKSLKQGQYRSLLTQAARHHAA 78 (517)
Q Consensus 2 KrQCDeKR~vYE~M~a~qk---EKGrsk~~KgEs~s~q~QLqaA~~EY~EEAtLfvFRLKSLKQGQ~rSLLTQAARHHAA 78 (517)
.+.++.++.-|+.....+. +|++......+-...+.+++.|..+|+.-...++--|..|.+....-+.+.-.....+
T Consensus 110 ~kkr~~~~~dyd~~~~~l~k~~~k~~~~~~~~~l~~~e~~~~~a~~~fe~~~~~l~~el~~~~~~~~~~~~~~l~~~~~~ 189 (217)
T d1urua_ 110 VEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFAT 189 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888889998876543 2222222223334455699999999999999999999999998888888888889999
Q ss_pred HHHhHHhhccchhhhhhHHHHHHhh
Q 010143 79 QLNFFRKGFKSLEAVDTHVRLVAER 103 (517)
Q Consensus 79 QL~fFrkgLKsLEavEPHVk~vaE~ 103 (517)
|+.||+.+++.++.+++++.-++++
T Consensus 190 q~~~~~~~~~~~~~l~~~~~~l~~~ 214 (217)
T d1urua_ 190 EQVFHNETAKIYSELEAIVDKLATE 214 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999655544
No 4
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.24 E-value=0.00014 Score=62.90 Aligned_cols=91 Identities=16% Similarity=0.213 Sum_probs=59.6
Q ss_pred chhhhhHHHHHHHHHHHHHhhcCCCCCCCCccchHHHHHHHHHHHHhhhhhhhhhhccccccchhhHHHHHHHHHHHHHH
Q 010143 2 KRQCDEKRNVCEYVMAQQREKGKSKSGKGESVSLQQQLQAANDEYEEEARLCVFRLKSLKQGQYRSLLTQAARHHAAQLN 81 (517)
Q Consensus 2 KrQCDeKR~vYE~M~a~qkEKGrsk~~KgEs~s~q~QLqaA~~EY~EEAtLfvFRLKSLKQGQ~rSLLTQAARHHAAQL~ 81 (517)
|.+|+..|..|+..+..+... +.|..| ..-+ +|+.|.++|++-..-++..|..|..-+ -..+.+---.++||+.
T Consensus 145 ~~~~~~~rk~~d~~~~~~~~~-~~k~~~---~~~e-~l~~a~~~~e~~~~~~~~~l~~l~~~~-~~~~~~l~~~~~aq~~ 218 (237)
T d2d4ca1 145 QSALQHHLKKLEGRRLDFDYK-KKRQGK---IPDE-ELRQALEKFDESKEIAESSMFNLLEMD-IEQVSQLSALVQAQLE 218 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHSS---CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhhh---hhHH-HHHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHHHHHHHHH
Confidence 456777788888877654322 112111 1233 788888777766555555555553222 2234555668999999
Q ss_pred hHHhhccchhhhhhHHH
Q 010143 82 FFRKGFKSLEAVDTHVR 98 (517)
Q Consensus 82 fFrkgLKsLEavEPHVk 98 (517)
||++|++.||.|.|++.
T Consensus 219 y~~~~~~~l~~l~~~l~ 235 (237)
T d2d4ca1 219 YHKQAVQILQQVTVRLE 235 (237)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999875
No 5
>d1y74a1 a.194.1.1 (A:17-73) Lin-7 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.09 E-value=9.3 Score=28.52 Aligned_cols=13 Identities=31% Similarity=0.496 Sum_probs=11.7
Q ss_pred hhhhHHHHHHHHH
Q 010143 4 QCDEKRNVCEYVM 16 (517)
Q Consensus 4 QCDeKR~vYE~M~ 16 (517)
-|+.=|+|||+|-
T Consensus 39 F~~avREVYehvy 51 (57)
T d1y74a1 39 FCSAIREVYEQLY 51 (57)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4999999999985
No 6
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.86 E-value=1e+02 Score=25.88 Aligned_cols=26 Identities=12% Similarity=0.026 Sum_probs=21.7
Q ss_pred HHHHHHhHHhhccchhhhhhHHHHHH
Q 010143 76 HAAQLNFFRKGFKSLEAVDTHVRLVA 101 (517)
Q Consensus 76 HAAQL~fFrkgLKsLEavEPHVk~va 101 (517)
=-||+.||.+|..-|+.+.|=++-++
T Consensus 205 ~~a~~~~~~q~~~~l~~~~~~~~~~~ 230 (248)
T d1y2oa1 205 AKNSAAYHSKGKELLAQKLPLWQQAC 230 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34789999999999999999877543
No 7
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.10 E-value=24 Score=26.34 Aligned_cols=28 Identities=21% Similarity=0.574 Sum_probs=17.4
Q ss_pred HH-HHHHHHHHHHhhcCCCCCCCCccchHHHHHHHHHHHHhh
Q 010143 9 RN-VCEYVMAQQREKGKSKSGKGESVSLQQQLQAANDEYEEE 49 (517)
Q Consensus 9 R~-vYE~M~a~qkEKGrsk~~KgEs~s~q~QLqaA~~EY~EE 49 (517)
|| +||||+ || |+.++- -.-+|-..|..+
T Consensus 9 RnvLfeYMm-----------G~-E~~tla-KVi~av~kF~~~ 37 (58)
T d1uptb_ 9 RKVLFEYMM-----------GR-ETKTMA-KVITTVLKFPDD 37 (58)
T ss_dssp HHHHHHHHT-----------TS-SHHHHH-HHHHHHTTCCHH
T ss_pred HHHHHHHHc-----------Cc-chhHHH-HHHHHHHhCCHH
Confidence 55 799994 33 776666 555555555544
No 8
>d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=14.96 E-value=28 Score=32.46 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.1
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHHhhccchhhhhhH
Q 010143 58 KSLKQGQYRSLLTQAARHHAAQLNFFRKGFKSLEAVDTH 96 (517)
Q Consensus 58 KSLKQGQ~rSLLTQAARHHAAQL~fFrkgLKsLEavEPH 96 (517)
++++.|.|+.+..|=||.|-....+||...+..+-||.|
T Consensus 316 ~aI~~g~f~~~~e~~~~~~p~~~~~~~~l~~~~~~~~~~ 354 (355)
T d1iq8a1 316 QAIKEGELWRLVDERARSHPKLYSAYKRLLEHYTFLEEF 354 (355)
T ss_dssp HHHHHTCHHHHHHHHHTTCHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc
Confidence 689999999999999999999999999988887777754
No 9
>d2gsca1 a.29.16.1 (A:9-125) Uncharacterized protein XCC0516 {Xanthomonas campestris pv. campestris [TaxId: 340]}
Probab=12.96 E-value=45 Score=25.85 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=26.2
Q ss_pred HHHHHHHHhHHhhccchhhhhhHHHHHHhhhccc
Q 010143 74 RHHAAQLNFFRKGFKSLEAVDTHVRLVAERQHID 107 (517)
Q Consensus 74 RHHAAQL~fFrkgLKsLEavEPHVk~vaE~QHID 107 (517)
+|.+-.++|+.-++.|++.++.|+.++.+..=|+
T Consensus 56 ~s~~d~~~fl~iA~gs~~E~~~~l~la~~~~~i~ 89 (117)
T d2gsca1 56 RSTPDYSRFLSIARGSLSELDTQVQIAARLGYSR 89 (117)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4555689999999999999999999987765443
No 10
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=11.63 E-value=49 Score=23.27 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=19.5
Q ss_pred CCCCccchHHHHHHHHHHHHhhhhh
Q 010143 28 GKGESVSLQQQLQAANDEYEEEARL 52 (517)
Q Consensus 28 ~KgEs~s~q~QLqaA~~EY~EEAtL 52 (517)
|.||.=+.+ +|+.|+..|+.+..=
T Consensus 1 ~~ge~d~~e-~l~~~F~~~D~d~~G 24 (77)
T d1oqpa_ 1 GSGERDSRE-EILKAFRLFDDDNSG 24 (77)
T ss_dssp CCTTSSHHH-HHHHHHHHHCTTCSS
T ss_pred CCCCccHHH-HHHHHHHHHcCCCCC
Confidence 678886677 999999999977653
Done!