Query 010153
Match_columns 516
No_of_seqs 213 out of 1485
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 21:02:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010153.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010153hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 5E-184 2E-188 1459.8 37.1 456 50-507 1-457 (555)
2 1pj3_A NAD-dependent malic enz 100.0 2E-183 6E-188 1459.2 35.3 457 50-507 3-462 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-183 7E-188 1463.0 35.3 460 46-507 33-494 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-105 1E-109 840.5 20.2 309 128-507 55-374 (487)
5 2a9f_A Putative malic enzyme ( 100.0 4E-100 1E-104 792.6 15.1 307 121-507 23-336 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1.5E-96 5E-101 764.2 16.4 308 121-508 27-342 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 3.4E-70 1.2E-74 575.1 17.2 308 121-507 21-343 (439)
8 3gvp_A Adenosylhomocysteinase 99.0 4.3E-09 1.5E-13 111.2 16.0 168 253-459 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 99.0 3.2E-09 1.1E-13 112.2 13.0 130 298-461 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.5 1.7E-07 6E-12 97.2 7.9 217 167-448 27-294 (401)
11 3ond_A Adenosylhomocysteinase; 98.1 1.1E-05 3.9E-10 86.4 10.4 132 298-462 225-366 (488)
12 3n58_A Adenosylhomocysteinase; 98.0 2.6E-05 8.7E-10 83.1 12.6 128 298-459 207-345 (464)
13 1l7d_A Nicotinamide nucleotide 97.5 0.0021 7.1E-08 65.8 16.4 225 167-448 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.3 0.00024 8.1E-09 74.6 6.6 110 328-455 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 97.1 0.00057 1.9E-08 71.2 7.0 104 329-449 182-305 (381)
16 3d4o_A Dipicolinate synthase s 96.9 0.0063 2.2E-07 59.7 11.8 123 309-460 133-256 (293)
17 3k92_A NAD-GDH, NAD-specific g 96.9 0.017 5.8E-07 61.0 15.1 178 253-449 126-329 (424)
18 3aoe_E Glutamate dehydrogenase 96.8 0.013 4.3E-07 61.9 13.7 186 253-461 123-332 (419)
19 4fcc_A Glutamate dehydrogenase 96.8 0.065 2.2E-06 57.0 19.2 182 253-449 141-354 (450)
20 1a4i_A Methylenetetrahydrofola 96.4 0.0058 2E-07 62.0 7.7 96 309-448 143-239 (301)
21 3aog_A Glutamate dehydrogenase 96.4 0.049 1.7E-06 57.8 14.6 186 253-461 140-353 (440)
22 3r3j_A Glutamate dehydrogenase 96.3 0.19 6.4E-06 53.7 18.9 190 253-461 145-368 (456)
23 3l07_A Bifunctional protein fo 96.3 0.009 3.1E-07 60.1 8.0 92 311-446 141-233 (285)
24 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.056 1.9E-06 56.9 13.4 178 254-449 117-326 (421)
25 3jyo_A Quinate/shikimate dehyd 96.0 0.012 4.2E-07 58.3 7.7 88 315-422 111-205 (283)
26 3p2o_A Bifunctional protein fo 96.0 0.014 4.9E-07 58.7 8.1 96 310-449 139-236 (285)
27 2tmg_A Protein (glutamate dehy 96.0 0.21 7.2E-06 52.6 17.2 178 254-449 115-319 (415)
28 3ngx_A Bifunctional protein fo 95.9 0.014 4.7E-07 58.6 7.5 91 310-446 131-222 (276)
29 2bma_A Glutamate dehydrogenase 95.9 0.11 3.7E-06 55.6 14.8 179 254-449 159-372 (470)
30 1b0a_A Protein (fold bifunctio 95.9 0.012 4.1E-07 59.3 7.0 96 309-448 137-233 (288)
31 4a5o_A Bifunctional protein fo 95.8 0.019 6.5E-07 57.8 7.8 95 311-449 141-237 (286)
32 3don_A Shikimate dehydrogenase 95.7 0.011 3.6E-07 58.8 5.7 111 315-449 101-214 (277)
33 1edz_A 5,10-methylenetetrahydr 95.7 0.014 4.9E-07 59.4 6.6 112 314-449 151-278 (320)
34 1c1d_A L-phenylalanine dehydro 95.7 0.23 8E-06 51.1 15.6 174 254-461 91-275 (355)
35 4a26_A Putative C-1-tetrahydro 95.6 0.022 7.5E-07 57.7 7.3 95 308-446 142-239 (300)
36 1v8b_A Adenosylhomocysteinase; 95.5 0.067 2.3E-06 57.3 11.2 124 305-461 234-357 (479)
37 3tnl_A Shikimate dehydrogenase 95.3 0.022 7.5E-07 57.6 6.3 91 315-422 138-237 (315)
38 1v9l_A Glutamate dehydrogenase 95.3 0.16 5.3E-06 53.7 12.9 177 254-449 116-325 (421)
39 1gpj_A Glutamyl-tRNA reductase 95.2 0.11 3.6E-06 53.6 11.4 102 328-449 164-269 (404)
40 3t4e_A Quinate/shikimate dehyd 95.2 0.026 8.7E-07 57.1 6.6 90 316-422 133-231 (312)
41 3oj0_A Glutr, glutamyl-tRNA re 95.1 0.0082 2.8E-07 52.2 2.3 109 309-449 4-113 (144)
42 2c2x_A Methylenetetrahydrofola 95.0 0.042 1.4E-06 55.2 7.3 98 309-448 136-234 (281)
43 2rir_A Dipicolinate synthase, 95.0 0.1 3.5E-06 51.2 10.0 110 322-459 148-257 (300)
44 2v6b_A L-LDH, L-lactate dehydr 94.9 0.0089 3E-07 59.4 2.1 123 333-473 2-140 (304)
45 1bgv_A Glutamate dehydrogenase 94.9 0.7 2.4E-05 49.2 16.6 178 255-449 137-350 (449)
46 2egg_A AROE, shikimate 5-dehyd 94.8 0.027 9.3E-07 55.8 5.2 87 316-422 125-215 (297)
47 3d64_A Adenosylhomocysteinase; 94.7 0.075 2.6E-06 57.1 8.8 110 309-449 258-367 (494)
48 3u62_A Shikimate dehydrogenase 94.7 0.043 1.5E-06 53.6 6.3 145 262-447 42-201 (253)
49 1leh_A Leucine dehydrogenase; 94.4 0.15 5.1E-06 52.6 9.7 159 259-449 93-264 (364)
50 1mld_A Malate dehydrogenase; o 94.1 0.1 3.5E-06 52.2 7.7 101 333-449 2-120 (314)
51 2o4c_A Erythronate-4-phosphate 94.1 0.37 1.3E-05 50.0 12.1 117 299-447 81-208 (380)
52 1hyh_A L-hicdh, L-2-hydroxyiso 94.1 0.062 2.1E-06 52.9 6.0 101 332-449 2-125 (309)
53 1pjc_A Protein (L-alanine dehy 94.0 0.084 2.9E-06 53.5 6.9 96 329-448 165-269 (361)
54 2hk9_A Shikimate dehydrogenase 93.7 0.15 5.3E-06 49.5 7.9 107 316-447 114-222 (275)
55 1pzg_A LDH, lactate dehydrogen 93.7 0.097 3.3E-06 52.7 6.7 120 332-472 10-157 (331)
56 3tri_A Pyrroline-5-carboxylate 93.6 0.12 4.1E-06 50.4 7.0 98 331-450 3-102 (280)
57 2ekl_A D-3-phosphoglycerate de 93.4 0.74 2.5E-05 45.9 12.5 170 298-502 90-287 (313)
58 3o8q_A Shikimate 5-dehydrogena 93.4 0.11 3.8E-06 51.4 6.4 97 262-375 50-159 (281)
59 3fbt_A Chorismate mutase and s 93.4 0.1 3.6E-06 51.9 6.2 104 316-449 107-218 (282)
60 3ce6_A Adenosylhomocysteinase; 93.3 0.63 2.2E-05 49.9 12.5 108 323-461 266-374 (494)
61 3oet_A Erythronate-4-phosphate 93.3 0.45 1.5E-05 49.5 11.1 120 298-449 83-213 (381)
62 3u95_A Glycoside hydrolase, fa 93.3 0.11 3.9E-06 55.1 6.6 39 427-468 140-178 (477)
63 3dtt_A NADP oxidoreductase; st 93.3 0.18 6.1E-06 47.9 7.4 109 325-449 13-127 (245)
64 1oju_A MDH, malate dehydrogena 93.2 0.06 2E-06 53.8 4.2 124 333-472 2-143 (294)
65 3pwz_A Shikimate dehydrogenase 93.1 0.12 3.9E-06 51.1 6.0 158 262-449 44-219 (272)
66 3mw9_A GDH 1, glutamate dehydr 93.1 0.57 1.9E-05 50.6 11.6 179 253-449 136-352 (501)
67 2i6t_A Ubiquitin-conjugating e 93.0 0.19 6.4E-06 50.3 7.5 120 332-472 15-150 (303)
68 2ewd_A Lactate dehydrogenase,; 93.0 0.09 3.1E-06 52.1 5.0 100 332-450 5-125 (317)
69 2g1u_A Hypothetical protein TM 92.9 0.18 6.1E-06 44.2 6.4 102 327-447 15-119 (155)
70 1ldn_A L-lactate dehydrogenase 92.8 0.056 1.9E-06 54.0 3.3 114 332-461 7-135 (316)
71 1b8p_A Protein (malate dehydro 92.7 0.054 1.9E-06 54.3 3.1 111 332-449 6-136 (329)
72 3tum_A Shikimate dehydrogenase 92.7 0.18 6.2E-06 49.8 6.8 48 316-374 110-157 (269)
73 1gtm_A Glutamate dehydrogenase 92.7 0.87 3E-05 47.7 12.2 114 254-379 115-250 (419)
74 2hjr_A Malate dehydrogenase; m 92.6 0.09 3.1E-06 52.9 4.5 127 332-476 15-160 (328)
75 2d5c_A AROE, shikimate 5-dehyd 92.4 0.2 6.9E-06 48.0 6.6 104 316-447 102-207 (263)
76 3fef_A Putative glucosidase LP 92.4 0.11 3.9E-06 55.0 5.2 106 329-449 3-149 (450)
77 1t2d_A LDH-P, L-lactate dehydr 92.4 0.12 4.1E-06 51.9 5.1 122 332-475 5-154 (322)
78 2eez_A Alanine dehydrogenase; 92.4 0.11 3.7E-06 52.7 4.8 97 328-448 163-268 (369)
79 2dbq_A Glyoxylate reductase; D 92.4 1.6 5.4E-05 43.8 13.2 121 298-447 89-241 (334)
80 2gcg_A Glyoxylate reductase/hy 92.3 1.1 3.6E-05 45.0 11.8 122 298-447 98-247 (330)
81 1o6z_A MDH, malate dehydrogena 92.3 0.071 2.4E-06 52.9 3.2 124 332-472 1-144 (303)
82 3d0o_A L-LDH 1, L-lactate dehy 92.2 0.1 3.6E-06 52.1 4.4 128 330-473 5-149 (317)
83 2zqz_A L-LDH, L-lactate dehydr 92.2 0.12 3.9E-06 52.2 4.7 127 331-473 9-151 (326)
84 1zud_1 Adenylyltransferase THI 92.1 0.16 5.5E-06 49.1 5.4 104 327-445 24-150 (251)
85 1ez4_A Lactate dehydrogenase; 92.0 0.14 4.9E-06 51.3 5.1 126 332-473 6-147 (318)
86 1a5z_A L-lactate dehydrogenase 91.9 0.21 7.1E-06 49.7 6.2 98 333-450 2-120 (319)
87 2rcy_A Pyrroline carboxylate r 91.8 0.78 2.7E-05 43.1 9.7 92 331-450 4-95 (262)
88 2hmt_A YUAA protein; RCK, KTN, 91.8 0.084 2.9E-06 44.3 2.7 103 329-449 4-108 (144)
89 1nyt_A Shikimate 5-dehydrogena 91.7 0.3 1E-05 47.4 6.9 49 315-375 103-151 (271)
90 3hdj_A Probable ornithine cycl 91.7 0.66 2.2E-05 46.5 9.5 101 330-459 120-227 (313)
91 1y6j_A L-lactate dehydrogenase 91.6 0.21 7.2E-06 50.0 5.8 121 332-473 8-149 (318)
92 1s6y_A 6-phospho-beta-glucosid 91.5 0.088 3E-06 55.6 3.1 127 332-472 8-175 (450)
93 3k5p_A D-3-phosphoglycerate de 91.3 2.3 7.9E-05 44.6 13.5 172 297-502 101-301 (416)
94 3vku_A L-LDH, L-lactate dehydr 91.2 0.2 6.9E-06 50.8 5.2 127 330-472 8-150 (326)
95 1p77_A Shikimate 5-dehydrogena 91.2 0.25 8.4E-06 48.0 5.7 49 315-375 103-151 (272)
96 4e12_A Diketoreductase; oxidor 91.0 0.058 2E-06 52.4 1.0 32 332-375 5-36 (283)
97 1obb_A Maltase, alpha-glucosid 91.0 0.15 5.3E-06 54.4 4.3 124 331-472 3-174 (480)
98 1x7d_A Ornithine cyclodeaminas 90.9 0.37 1.3E-05 49.1 6.8 115 316-458 116-239 (350)
99 3d1l_A Putative NADP oxidoredu 90.8 0.24 8.1E-06 47.0 5.1 99 327-449 6-105 (266)
100 3kkj_A Amine oxidase, flavin-c 90.8 0.21 7.2E-06 43.0 4.3 31 333-375 4-34 (336)
101 4g2n_A D-isomer specific 2-hyd 90.7 1.7 5.8E-05 44.4 11.6 171 298-502 116-315 (345)
102 1u8x_X Maltose-6'-phosphate gl 90.7 0.11 3.8E-06 55.3 2.9 126 331-472 28-194 (472)
103 3ba1_A HPPR, hydroxyphenylpyru 90.5 1.3 4.6E-05 44.7 10.5 119 299-449 110-254 (333)
104 3h5n_A MCCB protein; ubiquitin 90.5 0.55 1.9E-05 47.8 7.7 102 327-444 114-240 (353)
105 1ur5_A Malate dehydrogenase; o 90.5 0.2 6.7E-06 49.8 4.3 108 332-461 3-131 (309)
106 1lld_A L-lactate dehydrogenase 90.5 0.18 6.3E-06 49.2 4.1 105 331-450 7-128 (319)
107 1up7_A 6-phospho-beta-glucosid 90.4 0.28 9.6E-06 51.3 5.6 124 332-472 3-164 (417)
108 1wwk_A Phosphoglycerate dehydr 90.3 1.6 5.5E-05 43.4 10.7 119 299-447 89-233 (307)
109 1lu9_A Methylene tetrahydromet 90.2 1.3 4.5E-05 42.8 9.8 81 281-375 64-152 (287)
110 1smk_A Malate dehydrogenase, g 90.2 0.39 1.3E-05 48.1 6.2 104 332-449 9-128 (326)
111 2cuk_A Glycerate dehydrogenase 90.2 2.2 7.6E-05 42.5 11.7 117 298-448 87-231 (311)
112 2xxj_A L-LDH, L-lactate dehydr 90.2 0.14 4.8E-06 51.1 2.9 121 332-473 1-142 (310)
113 1z82_A Glycerol-3-phosphate de 90.0 0.34 1.2E-05 47.8 5.6 98 331-451 14-116 (335)
114 2vhw_A Alanine dehydrogenase; 90.0 0.3 1E-05 49.8 5.3 96 328-447 165-269 (377)
115 3jtm_A Formate dehydrogenase, 90.0 2 6.7E-05 43.9 11.3 175 298-503 108-310 (351)
116 3gvi_A Malate dehydrogenase; N 89.9 0.26 9E-06 49.8 4.7 126 329-472 5-149 (324)
117 1nvt_A Shikimate 5'-dehydrogen 89.9 0.28 9.4E-06 47.9 4.7 49 314-375 111-159 (287)
118 1xdw_A NAD+-dependent (R)-2-hy 89.8 2.5 8.7E-05 42.4 11.9 119 298-447 91-235 (331)
119 1guz_A Malate dehydrogenase; o 89.8 0.32 1.1E-05 48.2 5.2 100 333-449 2-121 (310)
120 3nep_X Malate dehydrogenase; h 89.7 0.22 7.4E-06 50.2 3.9 124 333-472 2-143 (314)
121 3h8v_A Ubiquitin-like modifier 89.7 0.37 1.3E-05 48.3 5.6 39 327-376 32-70 (292)
122 2d0i_A Dehydrogenase; structur 89.6 2.4 8.3E-05 42.6 11.5 91 327-447 142-236 (333)
123 1sc6_A PGDH, D-3-phosphoglycer 89.6 4 0.00014 42.4 13.4 119 298-447 91-234 (404)
124 1qp8_A Formate dehydrogenase; 89.5 3.5 0.00012 41.0 12.5 117 298-447 71-211 (303)
125 3phh_A Shikimate dehydrogenase 89.3 0.98 3.3E-05 44.7 8.2 100 316-448 107-212 (269)
126 4huj_A Uncharacterized protein 89.3 0.42 1.4E-05 44.6 5.3 93 332-450 24-117 (220)
127 3i83_A 2-dehydropantoate 2-red 89.2 0.57 1.9E-05 46.1 6.5 98 332-450 3-109 (320)
128 3p7m_A Malate dehydrogenase; p 89.2 0.25 8.7E-06 49.8 4.0 126 330-472 4-147 (321)
129 4dgs_A Dehydrogenase; structur 89.1 2.4 8.3E-05 43.1 11.1 167 299-503 116-311 (340)
130 3ldh_A Lactate dehydrogenase; 89.0 0.13 4.5E-06 52.4 1.8 125 330-472 20-163 (330)
131 2i99_A MU-crystallin homolog; 88.9 1.1 3.8E-05 44.3 8.4 123 316-469 122-247 (312)
132 3rui_A Ubiquitin-like modifier 88.9 0.27 9.2E-06 50.5 4.0 38 328-376 31-68 (340)
133 2j6i_A Formate dehydrogenase; 88.8 1.8 6E-05 44.3 10.0 144 279-448 88-259 (364)
134 1omo_A Alanine dehydrogenase; 88.8 1.4 4.9E-05 43.9 9.1 112 316-457 112-229 (322)
135 3tl2_A Malate dehydrogenase; c 88.8 0.31 1.1E-05 49.0 4.4 127 329-472 6-152 (315)
136 2raf_A Putative dinucleotide-b 88.7 1 3.5E-05 41.8 7.5 37 327-375 15-51 (209)
137 3pqe_A L-LDH, L-lactate dehydr 88.6 0.27 9.1E-06 49.8 3.7 127 331-473 5-148 (326)
138 1x0v_A GPD-C, GPDH-C, glycerol 88.5 0.97 3.3E-05 44.5 7.5 111 331-450 8-128 (354)
139 2d4a_B Malate dehydrogenase; a 88.4 0.3 1E-05 48.7 3.8 105 333-461 1-128 (308)
140 1txg_A Glycerol-3-phosphate de 88.4 1.2 4.2E-05 43.1 8.1 94 333-449 2-107 (335)
141 2ph5_A Homospermidine synthase 88.3 1.9 6.4E-05 46.3 10.1 99 330-447 12-115 (480)
142 2zyd_A 6-phosphogluconate dehy 88.3 0.96 3.3E-05 47.8 7.8 102 328-449 12-116 (480)
143 1hye_A L-lactate/malate dehydr 88.2 0.67 2.3E-05 46.0 6.2 124 333-473 2-148 (313)
144 2dpo_A L-gulonate 3-dehydrogen 88.2 0.16 5.5E-06 51.0 1.7 33 331-375 6-38 (319)
145 1hyu_A AHPF, alkyl hydroperoxi 88.1 0.46 1.6E-05 50.1 5.2 98 262-374 135-243 (521)
146 1jw9_B Molybdopterin biosynthe 88.1 0.38 1.3E-05 46.3 4.2 104 328-446 28-154 (249)
147 4hy3_A Phosphoglycerate oxidor 87.9 1.7 5.9E-05 44.7 9.2 159 310-504 134-320 (365)
148 3k96_A Glycerol-3-phosphate de 87.9 0.76 2.6E-05 46.7 6.5 100 331-450 29-137 (356)
149 1dxy_A D-2-hydroxyisocaproate 87.6 5.4 0.00018 40.1 12.5 121 298-449 90-236 (333)
150 4e21_A 6-phosphogluconate dehy 87.5 1.8 6.1E-05 44.1 9.0 96 329-449 20-118 (358)
151 2yq5_A D-isomer specific 2-hyd 87.5 6.5 0.00022 40.0 13.1 121 298-449 92-239 (343)
152 1j4a_A D-LDH, D-lactate dehydr 87.4 6.7 0.00023 39.4 13.1 139 298-468 92-255 (333)
153 3hg7_A D-isomer specific 2-hyd 87.3 1.3 4.6E-05 44.7 7.9 122 299-449 89-233 (324)
154 3gt0_A Pyrroline-5-carboxylate 87.1 1 3.5E-05 42.5 6.5 98 332-450 3-101 (247)
155 3evt_A Phosphoglycerate dehydr 87.1 1.9 6.5E-05 43.5 8.8 135 298-461 83-242 (324)
156 1yj8_A Glycerol-3-phosphate de 87.0 0.79 2.7E-05 46.0 6.0 110 332-450 22-145 (375)
157 1hdo_A Biliverdin IX beta redu 86.8 1.7 5.9E-05 38.2 7.5 98 331-446 3-111 (206)
158 1npy_A Hypothetical shikimate 86.7 0.76 2.6E-05 45.1 5.6 48 316-375 105-152 (271)
159 2pi1_A D-lactate dehydrogenase 86.7 4.2 0.00014 41.0 11.2 138 299-468 87-250 (334)
160 2x0j_A Malate dehydrogenase; o 86.4 0.85 2.9E-05 45.6 5.8 115 332-462 1-131 (294)
161 1ks9_A KPA reductase;, 2-dehyd 86.3 1.2 4.1E-05 42.0 6.5 95 333-449 2-100 (291)
162 3b1f_A Putative prephenate deh 86.2 1.3 4.3E-05 42.5 6.7 96 331-448 6-103 (290)
163 3k6j_A Protein F01G10.3, confi 86.0 0.91 3.1E-05 48.3 6.1 32 332-375 55-86 (460)
164 3ado_A Lambda-crystallin; L-gu 85.9 0.88 3E-05 46.1 5.7 32 331-374 6-37 (319)
165 2izz_A Pyrroline-5-carboxylate 85.8 2.3 7.7E-05 42.0 8.5 100 330-450 21-122 (322)
166 2w2k_A D-mandelate dehydrogena 85.7 5.5 0.00019 40.2 11.4 147 326-502 158-308 (348)
167 3gvx_A Glycerate dehydrogenase 85.6 9.6 0.00033 37.8 13.0 151 310-500 85-257 (290)
168 1lss_A TRK system potassium up 85.4 0.86 2.9E-05 37.9 4.5 97 331-449 4-106 (140)
169 2nac_A NAD-dependent formate d 85.4 3.5 0.00012 42.8 10.0 144 326-503 186-337 (393)
170 1gdh_A D-glycerate dehydrogena 85.3 4.1 0.00014 40.7 10.2 122 298-447 89-239 (320)
171 1y7t_A Malate dehydrogenase; N 85.0 0.66 2.2E-05 45.9 4.2 110 332-449 5-133 (327)
172 2p4q_A 6-phosphogluconate dehy 85.0 2.3 7.7E-05 45.3 8.5 98 332-449 11-112 (497)
173 3c85_A Putative glutathione-re 84.8 0.27 9.3E-06 43.9 1.2 102 328-447 36-140 (183)
174 2ew2_A 2-dehydropantoate 2-red 84.8 0.5 1.7E-05 45.1 3.1 101 332-450 4-112 (316)
175 1y8q_A Ubiquitin-like 1 activa 84.7 0.74 2.5E-05 46.7 4.5 38 327-375 32-69 (346)
176 1f0y_A HCDH, L-3-hydroxyacyl-C 84.6 0.82 2.8E-05 44.4 4.6 32 332-375 16-47 (302)
177 2g76_A 3-PGDH, D-3-phosphoglyc 84.6 4.6 0.00016 40.9 10.2 120 299-448 112-257 (335)
178 4ina_A Saccharopine dehydrogen 84.4 1.3 4.4E-05 45.6 6.2 96 332-447 2-108 (405)
179 4aj2_A L-lactate dehydrogenase 84.4 0.5 1.7E-05 48.0 3.1 129 328-473 16-162 (331)
180 4fgw_A Glycerol-3-phosphate de 84.3 1.2 4.2E-05 46.3 6.0 97 332-437 35-141 (391)
181 1jay_A Coenzyme F420H2:NADP+ o 84.2 0.46 1.6E-05 43.2 2.5 94 333-450 2-101 (212)
182 3abi_A Putative uncharacterize 84.1 0.71 2.4E-05 46.3 4.0 103 332-461 17-123 (365)
183 4gsl_A Ubiquitin-like modifier 84.1 0.65 2.2E-05 51.3 4.0 38 328-376 323-360 (615)
184 3pp8_A Glyoxylate/hydroxypyruv 84.0 1.9 6.5E-05 43.3 7.1 140 298-468 86-249 (315)
185 3vh1_A Ubiquitin-like modifier 83.9 0.58 2E-05 51.5 3.5 38 327-375 323-360 (598)
186 3vrd_B FCCB subunit, flavocyto 83.8 0.82 2.8E-05 45.4 4.3 35 331-375 2-36 (401)
187 3gg9_A D-3-phosphoglycerate de 83.6 4.1 0.00014 41.5 9.5 168 299-502 98-304 (352)
188 3fi9_A Malate dehydrogenase; s 83.6 0.57 2E-05 47.8 3.1 118 329-463 6-140 (343)
189 3ggo_A Prephenate dehydrogenas 83.2 3.3 0.00011 41.0 8.4 94 331-446 33-128 (314)
190 4ej6_A Putative zinc-binding d 83.0 8.9 0.00031 38.3 11.5 137 305-471 158-309 (370)
191 3e8x_A Putative NAD-dependent 82.9 2.3 8E-05 38.9 6.7 102 327-448 17-133 (236)
192 2vns_A Metalloreductase steap3 82.6 1 3.6E-05 41.8 4.2 94 329-450 26-119 (215)
193 2z2v_A Hypothetical protein PH 82.6 0.7 2.4E-05 47.1 3.3 118 330-478 15-137 (365)
194 3c24_A Putative oxidoreductase 82.4 2.3 7.9E-05 40.8 6.7 91 332-449 12-104 (286)
195 3lk7_A UDP-N-acetylmuramoylala 82.3 1.3 4.6E-05 45.9 5.3 118 328-486 6-126 (451)
196 3ip1_A Alcohol dehydrogenase, 82.2 6.1 0.00021 39.9 10.1 120 318-460 200-332 (404)
197 1mx3_A CTBP1, C-terminal bindi 82.2 9.7 0.00033 38.6 11.5 170 298-502 107-313 (347)
198 4egb_A DTDP-glucose 4,6-dehydr 81.9 4 0.00014 39.3 8.2 106 329-446 22-149 (346)
199 2dq4_A L-threonine 3-dehydroge 81.9 1.6 5.5E-05 43.0 5.5 125 308-456 143-272 (343)
200 2qrj_A Saccharopine dehydrogen 81.8 4.9 0.00017 42.0 9.3 82 331-446 214-300 (394)
201 2g5c_A Prephenate dehydrogenas 81.6 3.6 0.00012 39.1 7.6 97 332-449 2-99 (281)
202 3l6d_A Putative oxidoreductase 81.5 1.6 5.4E-05 42.8 5.2 94 328-447 6-102 (306)
203 4e5n_A Thermostable phosphite 81.4 3.6 0.00012 41.4 8.0 141 298-468 89-256 (330)
204 1id1_A Putative potassium chan 81.4 1 3.6E-05 39.1 3.5 34 330-375 2-35 (153)
205 3qsg_A NAD-binding phosphogluc 81.3 6.3 0.00022 38.7 9.5 34 331-375 24-57 (312)
206 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.3 2.4 8.3E-05 44.6 6.9 97 333-449 3-106 (478)
207 2uyy_A N-PAC protein; long-cha 81.0 2.1 7.1E-05 41.6 5.8 92 332-448 31-126 (316)
208 4dll_A 2-hydroxy-3-oxopropiona 80.7 2.4 8.1E-05 41.8 6.2 34 329-374 29-62 (320)
209 4hb9_A Similarities with proba 80.6 1.4 4.9E-05 42.8 4.6 22 332-353 2-23 (412)
210 3gpi_A NAD-dependent epimerase 80.2 1.5 5.2E-05 41.3 4.5 96 330-446 2-109 (286)
211 4ezb_A Uncharacterized conserv 80.2 2.2 7.6E-05 42.2 5.8 33 332-375 25-57 (317)
212 3ghy_A Ketopantoate reductase 79.9 1.1 3.6E-05 44.5 3.4 102 331-449 3-107 (335)
213 2iz1_A 6-phosphogluconate dehy 79.8 3.9 0.00013 42.9 7.9 99 331-449 5-106 (474)
214 4gwg_A 6-phosphogluconate dehy 79.7 3.7 0.00013 43.7 7.7 98 332-449 5-106 (484)
215 3d1c_A Flavin-containing putat 79.2 1.7 5.7E-05 42.1 4.5 35 331-376 4-38 (369)
216 3kb6_A D-lactate dehydrogenase 79.2 11 0.00037 38.1 10.6 92 326-447 136-231 (334)
217 3hhp_A Malate dehydrogenase; M 79.0 2.2 7.5E-05 42.9 5.4 123 333-472 2-147 (312)
218 3pef_A 6-phosphogluconate dehy 78.9 2.8 9.7E-05 40.2 6.0 91 332-447 2-96 (287)
219 1yb4_A Tartronic semialdehyde 78.8 2.9 9.8E-05 39.8 6.0 91 332-448 4-98 (295)
220 2h78_A Hibadh, 3-hydroxyisobut 78.7 2.5 8.5E-05 40.7 5.6 91 332-448 4-99 (302)
221 3dhn_A NAD-dependent epimerase 78.6 3.1 0.00011 37.5 5.9 96 332-446 5-112 (227)
222 3r6d_A NAD-dependent epimerase 78.5 1.8 6.3E-05 39.2 4.3 96 332-446 6-108 (221)
223 1tt5_B Ubiquitin-activating en 78.4 1.3 4.4E-05 46.6 3.7 38 327-375 36-73 (434)
224 3doj_A AT3G25530, dehydrogenas 78.3 3.6 0.00012 40.2 6.7 36 328-375 18-53 (310)
225 4a9w_A Monooxygenase; baeyer-v 77.9 1.7 6E-05 41.2 4.1 35 330-376 2-36 (357)
226 2pgd_A 6-phosphogluconate dehy 77.6 4.3 0.00015 42.7 7.4 98 332-449 3-104 (482)
227 1y8q_B Anthracycline-, ubiquit 77.4 1.6 5.4E-05 48.4 4.2 38 327-375 13-50 (640)
228 3cky_A 2-hydroxymethyl glutara 77.3 1.9 6.5E-05 41.3 4.2 92 332-449 5-101 (301)
229 3oz2_A Digeranylgeranylglycero 76.9 2 6.8E-05 41.3 4.3 31 333-375 6-36 (397)
230 2q1w_A Putative nucleotide sug 76.8 7 0.00024 37.7 8.1 104 328-446 18-137 (333)
231 3hn2_A 2-dehydropantoate 2-red 76.6 2 6.8E-05 42.1 4.2 101 332-450 3-107 (312)
232 3fbs_A Oxidoreductase; structu 76.5 2.2 7.5E-05 39.6 4.3 32 332-375 3-34 (297)
233 3i6i_A Putative leucoanthocyan 76.5 1.2 3.9E-05 43.5 2.5 101 328-443 7-117 (346)
234 3l4b_C TRKA K+ channel protien 76.4 1.5 5E-05 40.4 3.0 96 333-448 2-101 (218)
235 3fwz_A Inner membrane protein 76.3 1.2 3.9E-05 38.5 2.2 32 332-375 8-39 (140)
236 2f1k_A Prephenate dehydrogenas 76.3 5.3 0.00018 37.8 7.0 31 333-375 2-32 (279)
237 2x5o_A UDP-N-acetylmuramoylala 76.3 10 0.00034 39.0 9.6 111 329-484 3-116 (439)
238 3pdu_A 3-hydroxyisobutyrate de 76.1 3.5 0.00012 39.5 5.8 32 332-375 2-33 (287)
239 5mdh_A Malate dehydrogenase; o 76.1 1.1 3.6E-05 45.5 2.2 121 332-463 4-143 (333)
240 1bg6_A N-(1-D-carboxylethyl)-L 75.7 7.1 0.00024 38.0 7.9 93 332-447 5-110 (359)
241 3alj_A 2-methyl-3-hydroxypyrid 75.6 2.5 8.7E-05 41.6 4.7 38 328-377 8-45 (379)
242 2zbw_A Thioredoxin reductase; 75.5 2.4 8.1E-05 40.5 4.4 34 331-376 5-38 (335)
243 4id9_A Short-chain dehydrogena 75.2 6.1 0.00021 38.0 7.2 98 326-446 14-126 (347)
244 3fg2_P Putative rubredoxin red 75.2 2.4 8.4E-05 42.5 4.5 35 332-376 2-36 (404)
245 4b4u_A Bifunctional protein fo 75.1 7.2 0.00025 39.5 7.9 91 311-445 159-250 (303)
246 3f8d_A Thioredoxin reductase ( 75.1 2.5 8.6E-05 39.6 4.3 33 331-375 15-47 (323)
247 1vpd_A Tartronate semialdehyde 75.1 2 6.7E-05 41.1 3.7 32 332-375 6-37 (299)
248 3hyw_A Sulfide-quinone reducta 75.0 2.2 7.5E-05 43.4 4.2 34 332-375 3-36 (430)
249 2pzm_A Putative nucleotide sug 75.0 5.4 0.00019 38.4 6.8 103 327-446 16-136 (330)
250 2pv7_A T-protein [includes: ch 75.0 7.6 0.00026 37.8 7.9 32 332-375 22-54 (298)
251 3lzw_A Ferredoxin--NADP reduct 74.9 2.6 8.8E-05 39.8 4.4 33 331-375 7-39 (332)
252 3uko_A Alcohol dehydrogenase c 74.6 4.8 0.00016 40.2 6.5 45 319-374 182-226 (378)
253 3lxd_A FAD-dependent pyridine 74.4 2.7 9.3E-05 42.2 4.7 38 330-377 8-45 (415)
254 3qha_A Putative oxidoreductase 74.1 3.9 0.00013 39.7 5.6 91 331-447 15-106 (296)
255 3itj_A Thioredoxin reductase 1 73.6 2.3 8E-05 40.2 3.8 33 331-375 22-54 (338)
256 2bka_A CC3, TAT-interacting pr 73.6 9.7 0.00033 34.5 7.8 102 329-446 16-132 (242)
257 1i36_A Conserved hypothetical 73.4 6.2 0.00021 37.0 6.6 20 333-352 2-21 (264)
258 2jae_A L-amino acid oxidase; o 73.3 2.7 9.4E-05 42.8 4.4 42 324-377 4-45 (489)
259 3cgv_A Geranylgeranyl reductas 73.2 2.7 9.4E-05 40.9 4.2 35 330-376 3-37 (397)
260 2cvz_A Dehydrogenase, 3-hydrox 73.0 3.3 0.00011 39.1 4.6 90 333-449 3-93 (289)
261 3h8l_A NADH oxidase; membrane 72.8 3.1 0.00011 41.5 4.6 36 332-376 2-37 (409)
262 2q7v_A Thioredoxin reductase; 72.8 2.9 9.8E-05 39.9 4.2 33 331-375 8-40 (325)
263 3pdi_B Nitrogenase MOFE cofact 72.7 2 6.7E-05 45.3 3.2 89 326-442 308-397 (458)
264 2x3n_A Probable FAD-dependent 72.7 3.1 0.0001 41.1 4.5 35 331-377 6-40 (399)
265 3hwr_A 2-dehydropantoate 2-red 72.7 2.3 7.7E-05 41.9 3.5 99 328-451 16-125 (318)
266 1zej_A HBD-9, 3-hydroxyacyl-CO 72.6 3.1 0.00011 41.4 4.5 31 331-374 12-42 (293)
267 3rp8_A Flavoprotein monooxygen 72.6 3.2 0.00011 41.2 4.7 36 329-376 21-56 (407)
268 2vou_A 2,6-dihydroxypyridine h 72.6 3.6 0.00012 40.8 5.0 34 330-375 4-37 (397)
269 3nix_A Flavoprotein/dehydrogen 72.4 4.3 0.00015 40.1 5.5 35 331-377 5-39 (421)
270 3axb_A Putative oxidoreductase 72.1 3.5 0.00012 41.5 4.9 37 327-374 19-55 (448)
271 3dme_A Conserved exported prot 72.0 3.5 0.00012 39.4 4.6 33 331-375 4-36 (369)
272 2ywl_A Thioredoxin reductase r 71.9 3.6 0.00012 35.9 4.3 32 332-375 2-33 (180)
273 2xdo_A TETX2 protein; tetracyc 71.8 3.2 0.00011 41.3 4.4 36 329-376 24-59 (398)
274 2z1m_A GDP-D-mannose dehydrata 71.8 7.4 0.00025 37.0 6.8 101 330-446 2-127 (345)
275 1ygy_A PGDH, D-3-phosphoglycer 71.7 12 0.0004 40.0 9.0 120 298-446 88-232 (529)
276 3klj_A NAD(FAD)-dependent dehy 71.6 3.5 0.00012 41.7 4.7 37 330-378 8-44 (385)
277 3m2p_A UDP-N-acetylglucosamine 71.3 11 0.00037 35.8 7.8 93 332-446 3-109 (311)
278 1ryi_A Glycine oxidase; flavop 71.2 3.7 0.00013 39.9 4.6 35 331-377 17-51 (382)
279 2yjz_A Metalloreductase steap4 73.8 0.84 2.9E-05 42.5 0.0 92 329-449 17-108 (201)
280 3ef6_A Toluene 1,2-dioxygenase 70.9 3.8 0.00013 41.3 4.8 37 332-378 3-39 (410)
281 3k7m_X 6-hydroxy-L-nicotine ox 70.8 3.9 0.00013 40.6 4.8 31 333-375 3-33 (431)
282 3slg_A PBGP3 protein; structur 70.8 16 0.00053 35.6 9.0 101 328-446 21-141 (372)
283 3c96_A Flavin-containing monoo 70.7 3.9 0.00014 40.8 4.8 34 331-375 4-37 (410)
284 3r9u_A Thioredoxin reductase; 70.4 3.6 0.00012 38.5 4.2 23 331-353 4-26 (315)
285 3cty_A Thioredoxin reductase; 70.4 3.7 0.00013 39.0 4.4 33 331-375 16-48 (319)
286 1tt5_A APPBP1, amyloid protein 70.3 2.3 7.9E-05 45.8 3.2 39 327-376 28-66 (531)
287 3ab1_A Ferredoxin--NADP reduct 70.3 3.9 0.00013 39.7 4.5 34 331-376 14-47 (360)
288 1yvv_A Amine oxidase, flavin-c 70.2 3.6 0.00012 39.2 4.2 33 332-376 3-35 (336)
289 3ic5_A Putative saccharopine d 70.1 4.6 0.00016 32.4 4.2 85 330-436 4-92 (118)
290 4b8w_A GDP-L-fucose synthase; 69.9 6.3 0.00021 36.7 5.7 93 328-446 3-113 (319)
291 3pid_A UDP-glucose 6-dehydroge 69.9 16 0.00054 38.5 9.3 40 323-375 28-67 (432)
292 2q0l_A TRXR, thioredoxin reduc 69.7 4 0.00014 38.5 4.4 33 332-375 2-34 (311)
293 2gag_B Heterotetrameric sarcos 69.5 4.7 0.00016 39.4 4.9 35 331-376 21-56 (405)
294 1y56_B Sarcosine oxidase; dehy 69.3 3.9 0.00013 39.9 4.3 34 331-376 5-38 (382)
295 4eqs_A Coenzyme A disulfide re 69.2 3.6 0.00012 42.2 4.2 34 333-376 2-35 (437)
296 2ahr_A Putative pyrroline carb 69.0 3.6 0.00012 38.6 3.9 32 332-375 4-35 (259)
297 2gf3_A MSOX, monomeric sarcosi 69.0 4.2 0.00014 39.6 4.4 35 332-378 4-38 (389)
298 3s2u_A UDP-N-acetylglucosamine 69.0 5.8 0.0002 39.5 5.6 40 404-447 85-124 (365)
299 1trb_A Thioredoxin reductase; 68.8 3 0.0001 39.4 3.3 34 330-375 4-37 (320)
300 3iwa_A FAD-dependent pyridine 68.7 3.9 0.00013 41.9 4.3 37 331-377 3-39 (472)
301 2gqw_A Ferredoxin reductase; f 68.4 5.2 0.00018 40.4 5.1 38 331-378 7-44 (408)
302 1k0i_A P-hydroxybenzoate hydro 68.3 4.8 0.00016 39.6 4.7 33 332-376 3-35 (394)
303 1n2s_A DTDP-4-, DTDP-glucose o 68.2 5.5 0.00019 37.4 5.0 86 333-446 2-104 (299)
304 1rsg_A FMS1 protein; FAD bindi 68.0 1.9 6.3E-05 44.8 1.8 25 329-353 6-30 (516)
305 1zk7_A HGII, reductase, mercur 68.0 4.5 0.00016 41.3 4.7 33 331-375 4-36 (467)
306 1pqw_A Polyketide synthase; ro 67.8 14 0.00047 32.9 7.3 50 314-375 22-72 (198)
307 2uzz_A N-methyl-L-tryptophan o 67.8 4.5 0.00015 39.2 4.4 35 332-378 3-37 (372)
308 3ehe_A UDP-glucose 4-epimerase 67.7 14 0.00048 35.0 7.8 95 333-446 3-114 (313)
309 2gv8_A Monooxygenase; FMO, FAD 67.6 4.3 0.00015 41.2 4.4 37 330-376 5-41 (447)
310 3dje_A Fructosyl amine: oxygen 67.6 4.5 0.00015 40.5 4.5 37 331-378 6-42 (438)
311 3nrc_A Enoyl-[acyl-carrier-pro 67.5 7.5 0.00026 36.9 5.8 78 328-422 23-114 (280)
312 2oln_A NIKD protein; flavoprot 67.5 4.8 0.00016 39.6 4.6 36 331-378 4-39 (397)
313 3e48_A Putative nucleoside-dip 67.5 7.5 0.00026 36.4 5.7 97 333-446 2-106 (289)
314 3llv_A Exopolyphosphatase-rela 67.2 5 0.00017 33.9 4.1 34 330-375 5-38 (141)
315 3i3l_A Alkylhalidase CMLS; fla 67.1 6.7 0.00023 42.3 6.0 37 329-377 21-57 (591)
316 1vdc_A NTR, NADPH dependent th 67.0 3.6 0.00012 39.2 3.5 33 330-374 7-39 (333)
317 1c0p_A D-amino acid oxidase; a 66.9 5.6 0.00019 38.7 4.9 34 331-376 6-39 (363)
318 2vdc_G Glutamate synthase [NAD 66.8 5.2 0.00018 41.6 4.9 35 330-376 121-155 (456)
319 1e6u_A GDP-fucose synthetase; 66.8 6.9 0.00024 37.1 5.4 87 331-446 3-107 (321)
320 1np3_A Ketol-acid reductoisome 66.7 7.9 0.00027 38.6 6.0 88 329-443 14-104 (338)
321 3grf_A Ornithine carbamoyltran 66.7 18 0.00061 36.8 8.7 136 263-417 91-240 (328)
322 3g0o_A 3-hydroxyisobutyrate de 66.7 3.5 0.00012 40.1 3.3 32 332-375 8-39 (303)
323 3ka7_A Oxidoreductase; structu 66.6 5.6 0.00019 39.3 4.9 31 333-375 2-32 (425)
324 2xve_A Flavin-containing monoo 66.5 4.7 0.00016 41.6 4.5 39 332-376 3-41 (464)
325 3cgb_A Pyridine nucleotide-dis 66.2 4.4 0.00015 41.8 4.2 65 304-378 6-73 (480)
326 3qvo_A NMRA family protein; st 66.1 7.8 0.00027 35.6 5.5 101 329-446 21-125 (236)
327 3s5w_A L-ornithine 5-monooxyge 66.0 4.5 0.00015 40.9 4.1 40 331-377 30-69 (463)
328 3vtz_A Glucose 1-dehydrogenase 65.9 13 0.00045 35.2 7.2 79 325-422 8-92 (269)
329 2eq6_A Pyruvate dehydrogenase 65.8 4.7 0.00016 41.4 4.3 35 330-376 5-39 (464)
330 3urh_A Dihydrolipoyl dehydroge 65.6 5 0.00017 41.4 4.4 34 331-376 25-58 (491)
331 2c20_A UDP-glucose 4-epimerase 65.5 13 0.00044 35.4 7.0 99 332-446 2-118 (330)
332 4ep1_A Otcase, ornithine carba 65.3 30 0.001 35.5 10.1 130 270-421 122-257 (340)
333 4gcm_A TRXR, thioredoxin reduc 65.3 5.1 0.00017 38.0 4.1 32 332-375 7-38 (312)
334 3ew7_A LMO0794 protein; Q8Y8U8 65.2 19 0.00066 31.8 7.8 91 333-446 2-103 (221)
335 2r9z_A Glutathione amide reduc 65.2 5.2 0.00018 41.1 4.5 33 331-375 4-36 (463)
336 3cmm_A Ubiquitin-activating en 65.1 5.2 0.00018 46.5 4.9 38 327-375 23-60 (1015)
337 2q1s_A Putative nucleotide sug 65.0 11 0.00038 37.0 6.7 103 328-446 29-151 (377)
338 3nrn_A Uncharacterized protein 65.0 6.1 0.00021 39.4 4.8 31 333-375 2-32 (421)
339 3uox_A Otemo; baeyer-villiger 64.9 6.1 0.00021 42.0 5.1 35 330-376 8-42 (545)
340 1dxl_A Dihydrolipoamide dehydr 64.8 5.9 0.0002 40.3 4.8 33 331-375 6-38 (470)
341 2wm3_A NMRA-like family domain 64.7 3 0.0001 39.5 2.4 99 331-447 5-115 (299)
342 2yy7_A L-threonine dehydrogena 64.5 5.7 0.0002 37.4 4.3 97 332-444 3-116 (312)
343 4g6h_A Rotenone-insensitive NA 64.5 2.9 9.9E-05 44.0 2.4 32 332-375 43-74 (502)
344 3sx6_A Sulfide-quinone reducta 64.4 5.9 0.0002 40.2 4.7 36 332-376 5-40 (437)
345 3kd9_A Coenzyme A disulfide re 64.3 5.5 0.00019 40.5 4.4 37 331-377 3-39 (449)
346 2hqm_A GR, grase, glutathione 64.3 5.3 0.00018 41.2 4.4 34 330-375 10-43 (479)
347 3h28_A Sulfide-quinone reducta 64.2 5.8 0.0002 40.1 4.6 35 332-376 3-37 (430)
348 3v76_A Flavoprotein; structura 64.1 5.2 0.00018 41.1 4.2 35 331-377 27-61 (417)
349 3ntd_A FAD-dependent pyridine 64.0 7.3 0.00025 40.6 5.4 37 332-378 2-38 (565)
350 3gg2_A Sugar dehydrogenase, UD 64.0 6.2 0.00021 41.3 4.8 32 332-375 3-34 (450)
351 2nvu_B Maltose binding protein 63.9 3.6 0.00012 45.8 3.1 37 329-376 409-445 (805)
352 4ap3_A Steroid monooxygenase; 63.9 5.7 0.0002 42.3 4.6 35 330-376 20-54 (549)
353 2d8a_A PH0655, probable L-thre 63.8 6.4 0.00022 38.7 4.7 131 314-470 153-290 (348)
354 1m6i_A Programmed cell death p 63.3 7.3 0.00025 40.5 5.2 38 330-377 10-47 (493)
355 2cul_A Glucose-inhibited divis 63.2 6.1 0.00021 36.6 4.2 33 331-375 3-35 (232)
356 2weu_A Tryptophan 5-halogenase 62.8 5.2 0.00018 41.2 3.9 37 332-377 3-39 (511)
357 2qae_A Lipoamide, dihydrolipoy 62.8 6.3 0.00021 40.3 4.5 34 331-376 2-35 (468)
358 1fl2_A Alkyl hydroperoxide red 62.7 5.7 0.0002 37.4 3.9 32 332-375 2-33 (310)
359 3ihm_A Styrene monooxygenase A 62.7 6.1 0.00021 40.1 4.4 32 332-375 23-54 (430)
360 2p5y_A UDP-glucose 4-epimerase 62.7 14 0.00048 34.9 6.7 98 333-446 2-117 (311)
361 2x4g_A Nucleoside-diphosphate- 62.6 16 0.00054 34.8 7.1 97 332-446 14-126 (342)
362 4gde_A UDP-galactopyranose mut 62.6 7.1 0.00024 39.6 4.8 23 331-353 10-32 (513)
363 3ek2_A Enoyl-(acyl-carrier-pro 62.6 6.7 0.00023 36.4 4.3 38 326-375 9-49 (271)
364 1q1r_A Putidaredoxin reductase 62.6 7.2 0.00025 39.7 4.9 37 331-377 4-40 (431)
365 2a87_A TRXR, TR, thioredoxin r 62.6 5.4 0.00018 38.4 3.8 34 330-375 13-46 (335)
366 4a5l_A Thioredoxin reductase; 62.5 5.2 0.00018 37.6 3.6 31 333-375 6-36 (314)
367 2nu8_A Succinyl-COA ligase [AD 62.5 16 0.00054 35.9 7.2 86 331-442 7-93 (288)
368 2wpf_A Trypanothione reductase 62.4 8 0.00027 40.2 5.3 32 331-373 7-38 (495)
369 2a8x_A Dihydrolipoyl dehydroge 62.4 6.1 0.00021 40.3 4.4 33 331-375 3-35 (464)
370 2bc0_A NADH oxidase; flavoprot 62.3 7.1 0.00024 40.4 4.9 37 331-376 35-71 (490)
371 2c5a_A GDP-mannose-3', 5'-epim 62.2 26 0.00089 34.5 8.8 99 330-446 28-145 (379)
372 2e4g_A Tryptophan halogenase; 62.1 6.5 0.00022 41.4 4.6 38 331-377 25-62 (550)
373 3ics_A Coenzyme A-disulfide re 62.1 8.8 0.0003 40.5 5.6 39 330-378 35-73 (588)
374 1w4x_A Phenylacetone monooxyge 62.0 7.3 0.00025 41.0 5.0 36 329-376 14-49 (542)
375 2v3a_A Rubredoxin reductase; a 62.0 5.8 0.0002 39.3 4.0 35 331-375 4-38 (384)
376 2qa2_A CABE, polyketide oxygen 62.0 6.5 0.00022 41.1 4.5 34 330-375 11-44 (499)
377 1mo9_A ORF3; nucleotide bindin 61.9 5.9 0.0002 41.5 4.2 35 330-376 42-76 (523)
378 2yqu_A 2-oxoglutarate dehydrog 61.9 6.4 0.00022 40.1 4.4 33 332-376 2-34 (455)
379 2aqj_A Tryptophan halogenase, 61.8 6.6 0.00022 41.1 4.5 37 331-376 5-41 (538)
380 3dqp_A Oxidoreductase YLBE; al 61.7 14 0.00048 33.2 6.2 94 333-446 2-106 (219)
381 3qj4_A Renalase; FAD/NAD(P)-bi 61.7 4.6 0.00016 39.1 3.1 35 332-375 2-36 (342)
382 3pi7_A NADH oxidoreductase; gr 61.5 36 0.0012 33.3 9.6 93 320-434 155-254 (349)
383 4fk1_A Putative thioredoxin re 61.4 6.5 0.00022 37.4 4.1 33 331-375 6-38 (304)
384 1ges_A Glutathione reductase; 61.3 5.6 0.00019 40.7 3.8 33 331-375 4-36 (450)
385 1dlj_A UDP-glucose dehydrogena 61.2 4.4 0.00015 41.5 3.0 30 333-375 2-31 (402)
386 3fpz_A Thiazole biosynthetic e 61.1 7 0.00024 37.8 4.3 37 329-375 63-99 (326)
387 2zcu_A Uncharacterized oxidore 61.0 5.9 0.0002 36.8 3.6 98 333-446 1-104 (286)
388 3c4a_A Probable tryptophan hyd 61.0 7.6 0.00026 38.4 4.6 21 333-353 2-22 (381)
389 1zmd_A Dihydrolipoyl dehydroge 60.9 6.6 0.00023 40.2 4.3 34 331-376 6-39 (474)
390 4gbj_A 6-phosphogluconate dehy 60.9 13 0.00045 36.4 6.3 96 332-456 6-105 (297)
391 3oc4_A Oxidoreductase, pyridin 60.8 6.9 0.00024 39.8 4.4 36 332-377 3-38 (452)
392 3k30_A Histamine dehydrogenase 60.7 8.4 0.00029 41.9 5.3 34 331-376 391-424 (690)
393 1uzm_A 3-oxoacyl-[acyl-carrier 60.7 20 0.0007 33.2 7.3 77 326-422 10-92 (247)
394 3dfz_A SIRC, precorrin-2 dehyd 60.5 6.4 0.00022 37.8 3.9 36 328-375 28-63 (223)
395 1xq6_A Unknown protein; struct 60.4 10 0.00034 34.2 5.0 100 330-446 3-133 (253)
396 2o7s_A DHQ-SDH PR, bifunctiona 60.4 9.9 0.00034 40.3 5.7 36 328-375 361-396 (523)
397 1lvl_A Dihydrolipoamide dehydr 60.3 6.9 0.00023 40.1 4.3 33 331-375 5-37 (458)
398 2dkn_A 3-alpha-hydroxysteroid 60.3 12 0.0004 34.0 5.5 68 333-422 3-73 (255)
399 2bry_A NEDD9 interacting prote 60.2 7.7 0.00026 40.5 4.7 36 330-377 91-126 (497)
400 2qcu_A Aerobic glycerol-3-phos 60.2 7.1 0.00024 40.6 4.4 34 331-376 3-36 (501)
401 1ebd_A E3BD, dihydrolipoamide 60.1 6.3 0.00021 40.1 3.9 32 332-375 4-35 (455)
402 2qa1_A PGAE, polyketide oxygen 60.0 6.7 0.00023 41.0 4.3 26 328-353 8-33 (500)
403 1onf_A GR, grase, glutathione 60.0 6.5 0.00022 40.8 4.1 33 332-376 3-35 (500)
404 1vl0_A DTDP-4-dehydrorhamnose 59.9 8.6 0.00029 36.0 4.6 88 328-446 9-113 (292)
405 1yqd_A Sinapyl alcohol dehydro 59.9 18 0.0006 36.0 7.1 122 314-460 171-296 (366)
406 3m6i_A L-arabinitol 4-dehydrog 59.7 10 0.00035 37.4 5.4 58 305-374 155-212 (363)
407 3c4n_A Uncharacterized protein 59.7 8.3 0.00028 38.6 4.7 35 331-375 36-70 (405)
408 1hdc_A 3-alpha, 20 beta-hydrox 59.5 7.2 0.00024 36.5 4.0 36 328-375 2-38 (254)
409 3l8k_A Dihydrolipoyl dehydroge 59.4 8.1 0.00028 39.6 4.6 34 331-376 4-37 (466)
410 3gwf_A Cyclohexanone monooxyge 59.3 6.2 0.00021 41.9 3.9 36 330-376 7-42 (540)
411 1v59_A Dihydrolipoamide dehydr 59.3 7.8 0.00027 39.6 4.5 34 331-376 5-38 (478)
412 3ihg_A RDME; flavoenzyme, anth 59.2 6.8 0.00023 40.8 4.1 35 330-376 4-38 (535)
413 3g3e_A D-amino-acid oxidase; F 59.1 8.8 0.0003 37.1 4.6 38 333-376 2-39 (351)
414 4b63_A L-ornithine N5 monooxyg 59.0 6.1 0.00021 41.4 3.7 22 333-354 41-62 (501)
415 2cdu_A NADPH oxidase; flavoenz 58.9 8.1 0.00028 39.3 4.5 34 333-376 2-35 (452)
416 1nhp_A NADH peroxidase; oxidor 58.7 8.3 0.00028 39.1 4.5 35 333-377 2-36 (447)
417 4a2c_A Galactitol-1-phosphate 58.7 25 0.00084 34.2 7.8 56 307-374 138-193 (346)
418 3o0h_A Glutathione reductase; 58.7 8.5 0.00029 39.6 4.7 33 331-375 26-58 (484)
419 3e1t_A Halogenase; flavoprotei 58.7 6.4 0.00022 41.0 3.8 35 330-376 6-40 (512)
420 1s3e_A Amine oxidase [flavin-c 58.3 8.5 0.00029 39.7 4.6 35 331-377 4-38 (520)
421 2zb4_A Prostaglandin reductase 58.2 19 0.00064 35.4 6.9 56 309-375 137-195 (357)
422 1wdk_A Fatty oxidation complex 58.2 12 0.0004 41.6 5.9 34 330-375 313-346 (715)
423 3i6d_A Protoporphyrinogen oxid 58.0 8.2 0.00028 38.4 4.3 23 332-354 6-28 (470)
424 3lad_A Dihydrolipoamide dehydr 58.0 9 0.00031 39.1 4.7 33 331-375 3-35 (476)
425 7mdh_A Protein (malate dehydro 58.0 11 0.00037 39.1 5.3 119 331-462 32-171 (375)
426 3lov_A Protoporphyrinogen oxid 58.0 13 0.00043 37.7 5.7 36 331-376 4-39 (475)
427 2yg5_A Putrescine oxidase; oxi 58.0 8.9 0.0003 38.4 4.6 35 330-376 4-38 (453)
428 2pyx_A Tryptophan halogenase; 57.9 7.8 0.00027 40.4 4.3 39 331-376 7-52 (526)
429 3uog_A Alcohol dehydrogenase; 57.7 8.9 0.0003 38.1 4.5 91 319-435 178-279 (363)
430 1xdi_A RV3303C-LPDA; reductase 57.6 7.8 0.00027 40.1 4.2 36 332-376 3-38 (499)
431 2q2v_A Beta-D-hydroxybutyrate 57.5 8.5 0.00029 35.8 4.1 35 329-375 2-37 (255)
432 2gqf_A Hypothetical protein HI 57.5 7.2 0.00025 39.6 3.9 35 331-377 4-38 (401)
433 4eez_A Alcohol dehydrogenase 1 57.4 24 0.00083 34.2 7.5 47 316-374 150-196 (348)
434 3enk_A UDP-glucose 4-epimerase 57.4 11 0.00037 36.1 4.9 97 331-446 5-129 (341)
435 1pl8_A Human sorbitol dehydrog 57.3 14 0.00047 36.5 5.8 49 314-374 156-204 (356)
436 1hxh_A 3BETA/17BETA-hydroxyste 57.2 6.3 0.00022 36.8 3.1 36 328-375 3-39 (253)
437 3sxp_A ADP-L-glycero-D-mannohe 57.1 22 0.00075 34.5 7.1 108 327-446 6-138 (362)
438 1xhc_A NADH oxidase /nitrite r 57.1 6.4 0.00022 39.2 3.4 35 331-378 8-42 (367)
439 3tzq_B Short-chain type dehydr 57.0 9.3 0.00032 36.2 4.3 77 327-422 7-96 (271)
440 3sc6_A DTDP-4-dehydrorhamnose 57.0 7 0.00024 36.5 3.4 84 332-446 6-106 (287)
441 4dgk_A Phytoene dehydrogenase; 57.0 7.8 0.00027 39.4 4.0 22 332-353 2-23 (501)
442 3nyc_A D-arginine dehydrogenas 56.8 6.6 0.00023 37.8 3.3 34 330-376 8-41 (381)
443 1sb8_A WBPP; epimerase, 4-epim 56.7 12 0.0004 36.3 5.0 101 329-446 25-153 (352)
444 2vvm_A Monoamine oxidase N; FA 56.6 9.7 0.00033 38.8 4.7 22 332-353 40-61 (495)
445 1ojt_A Surface protein; redox- 56.4 9.3 0.00032 39.3 4.5 34 331-376 6-39 (482)
446 2cdc_A Glucose dehydrogenase g 56.3 31 0.0011 34.1 8.2 33 331-375 181-213 (366)
447 3ktd_A Prephenate dehydrogenas 56.2 12 0.0004 38.0 5.1 89 332-446 9-101 (341)
448 2e1m_A L-glutamate oxidase; L- 56.2 10 0.00036 38.8 4.8 35 329-375 42-76 (376)
449 2bi7_A UDP-galactopyranose mut 56.1 9.6 0.00033 38.4 4.5 33 331-375 3-35 (384)
450 3tpf_A Otcase, ornithine carba 56.1 69 0.0024 32.2 10.7 135 262-419 81-222 (307)
451 2r0c_A REBC; flavin adenine di 56.0 8.7 0.0003 40.5 4.3 34 331-376 26-59 (549)
452 3ruf_A WBGU; rossmann fold, UD 56.0 7.9 0.00027 37.2 3.7 101 329-446 23-151 (351)
453 3ec7_A Putative dehydrogenase; 55.9 5.8 0.0002 39.5 2.8 97 328-443 20-116 (357)
454 3nks_A Protoporphyrinogen oxid 55.4 9.3 0.00032 38.5 4.2 34 332-375 3-36 (477)
455 3dk9_A Grase, GR, glutathione 55.3 8.7 0.0003 39.3 4.1 34 330-375 19-52 (478)
456 3n74_A 3-ketoacyl-(acyl-carrie 55.1 7.5 0.00026 36.1 3.3 77 327-422 5-94 (261)
457 3atr_A Conserved archaeal prot 54.9 5.5 0.00019 40.6 2.5 34 331-376 6-39 (453)
458 3tpc_A Short chain alcohol deh 54.9 28 0.00097 32.3 7.2 37 327-375 3-40 (257)
459 1o94_A Tmadh, trimethylamine d 54.8 10 0.00035 41.7 4.8 34 331-376 389-422 (729)
460 4hv4_A UDP-N-acetylmuramate--L 54.8 12 0.00041 39.3 5.1 104 332-473 23-130 (494)
461 1cjc_A Protein (adrenodoxin re 54.7 12 0.00043 38.7 5.2 35 331-375 6-40 (460)
462 1rp0_A ARA6, thiazole biosynth 54.5 11 0.00037 36.0 4.4 37 330-377 38-74 (284)
463 2i0z_A NAD(FAD)-utilizing dehy 54.5 9.5 0.00033 38.9 4.2 34 332-377 27-60 (447)
464 2ydy_A Methionine adenosyltran 54.3 23 0.00079 33.4 6.6 92 331-446 2-110 (315)
465 3csu_A Protein (aspartate carb 54.2 1.2E+02 0.0042 30.5 12.2 129 269-421 94-231 (310)
466 1fec_A Trypanothione reductase 54.2 13 0.00044 38.6 5.2 32 331-373 3-34 (490)
467 2b9w_A Putative aminooxidase; 54.0 11 0.00039 37.2 4.6 23 330-352 5-27 (424)
468 2iid_A L-amino-acid oxidase; f 54.0 14 0.00048 37.6 5.4 23 331-353 33-55 (498)
469 1zq6_A Otcase, ornithine carba 53.9 68 0.0023 33.1 10.4 116 286-420 145-274 (359)
470 3st7_A Capsular polysaccharide 53.9 28 0.00097 33.9 7.3 79 333-446 2-94 (369)
471 1o5i_A 3-oxoacyl-(acyl carrier 53.8 36 0.0012 31.6 7.8 76 327-422 15-92 (249)
472 3ko8_A NAD-dependent epimerase 53.7 42 0.0014 31.4 8.3 95 332-446 1-113 (312)
473 3i1j_A Oxidoreductase, short c 53.7 24 0.00082 32.2 6.4 37 327-375 10-47 (247)
474 3cmm_A Ubiquitin-activating en 53.4 9.6 0.00033 44.3 4.4 42 328-375 422-463 (1015)
475 3k31_A Enoyl-(acyl-carrier-pro 53.2 15 0.00051 35.3 5.1 38 326-375 25-65 (296)
476 1f8f_A Benzyl alcohol dehydrog 53.2 28 0.00095 34.4 7.2 50 314-374 174-223 (371)
477 2bcg_G Secretory pathway GDP d 53.1 11 0.00036 38.7 4.3 36 331-378 11-46 (453)
478 1rkx_A CDP-glucose-4,6-dehydra 53.1 24 0.00081 34.0 6.6 102 329-446 7-132 (357)
479 2gn4_A FLAA1 protein, UDP-GLCN 53.0 9.9 0.00034 37.4 3.9 101 327-446 17-142 (344)
480 2fzw_A Alcohol dehydrogenase c 52.6 28 0.00095 34.4 7.1 45 319-374 179-223 (373)
481 1p0f_A NADP-dependent alcohol 52.5 28 0.00096 34.4 7.1 45 319-374 180-224 (373)
482 2jl1_A Triphenylmethane reduct 52.3 5.6 0.00019 37.1 1.9 98 333-446 2-107 (287)
483 2rgh_A Alpha-glycerophosphate 52.0 12 0.0004 40.0 4.5 34 331-376 32-65 (571)
484 1gte_A Dihydropyrimidine dehyd 52.0 11 0.00036 43.4 4.4 34 331-375 187-220 (1025)
485 4gqa_A NAD binding oxidoreduct 51.9 23 0.00078 35.7 6.5 101 319-434 13-118 (412)
486 1v0j_A UDP-galactopyranose mut 51.7 12 0.00041 37.7 4.3 23 331-353 7-29 (399)
487 1kyq_A Met8P, siroheme biosynt 51.7 8.5 0.00029 38.1 3.2 36 328-375 10-45 (274)
488 1y0p_A Fumarate reductase flav 51.7 14 0.00047 39.1 5.0 40 327-378 122-161 (571)
489 4dna_A Probable glutathione re 51.7 11 0.00038 38.4 4.2 33 331-375 5-37 (463)
490 3fys_A Protein DEGV; fatty aci 51.4 14 0.00048 37.2 4.8 152 157-365 16-178 (315)
491 1zk4_A R-specific alcohol dehy 51.4 9.8 0.00034 34.8 3.4 37 327-375 2-39 (251)
492 3da1_A Glycerol-3-phosphate de 51.2 10 0.00035 40.4 3.9 33 331-375 18-50 (561)
493 2ivd_A PPO, PPOX, protoporphyr 51.1 10 0.00035 38.2 3.8 33 331-375 16-48 (478)
494 3oig_A Enoyl-[acyl-carrier-pro 51.0 21 0.00073 33.1 5.7 37 327-375 3-42 (266)
495 1wly_A CAAR, 2-haloacrylate re 50.9 25 0.00084 34.2 6.3 50 314-375 129-179 (333)
496 1kol_A Formaldehyde dehydrogen 50.9 27 0.00094 34.8 6.8 49 314-374 170-218 (398)
497 1ps9_A 2,4-dienoyl-COA reducta 50.5 11 0.00039 40.7 4.2 34 331-376 373-406 (671)
498 3hdq_A UDP-galactopyranose mut 50.5 15 0.0005 37.9 4.8 34 330-375 28-61 (397)
499 1pn0_A Phenol 2-monooxygenase; 50.4 12 0.0004 40.9 4.3 39 331-376 8-46 (665)
500 1e3j_A NADP(H)-dependent ketos 50.3 21 0.00071 35.1 5.8 48 314-374 153-200 (352)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=5.3e-184 Score=1459.84 Aligned_cols=456 Identities=54% Similarity=0.937 Sum_probs=449.9
Q ss_pred cccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhccCCCchhHHHHhhhhhhhhhhhhHhhhhh
Q 010153 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (516)
Q Consensus 50 ~~G~~ll~~p~~NKGtaFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (516)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.|+++++++|+||+||++||++||+||||++.+
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccchhHHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCCCCccccchh
Q 010153 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (516)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~G 209 (516)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||+|++||+||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH
Q 010153 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (516)
Q Consensus 210 Kl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 289 (516)
|++|||+||||||++|||||||+|||||+||+||+|+||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeE
Q 010153 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (516)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (516)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||||||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCCCceee-CCEEeccccccceeecccchHHHHHHH
Q 010153 450 SQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQVYNHNHFAFAKIPIIIFL 507 (516)
Q Consensus 450 ~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~-~Grt~~p~Q~NN~yiFPGiglg~il~~ 507 (516)
+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||+|+++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~ 457 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCG 457 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHT
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcC
Confidence 9999999999999999999999999999999 999999999999999999999999875
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.8e-183 Score=1459.24 Aligned_cols=457 Identities=52% Similarity=0.935 Sum_probs=450.0
Q ss_pred cccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhccCCCchhHHHHhhhhhhhhhhhhHhhhhh
Q 010153 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (516)
Q Consensus 50 ~~G~~ll~~p~~NKGtaFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (516)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.|+++++++|+||+||++||++||+||||++.+
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccchhHHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCCCCccccchh
Q 010153 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (516)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~G 209 (516)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+++|+++|+|||.++|+|||||||||||||||+|++||+||+|
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH
Q 010153 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (516)
Q Consensus 210 Kl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 289 (516)
|++|||+||||||++|||||||+|||||+||+||+|+||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeE
Q 010153 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (516)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (516)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+|+|||++||
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcE
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 599999999999
Q ss_pred EEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999435999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEecCCCCCceee-CCEEeccccccceeecccchHHHHHHH
Q 010153 448 PTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQVYNHNHFAFAKIPIIIFL 507 (516)
Q Consensus 448 Pt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~-~Grt~~p~Q~NN~yiFPGiglg~il~~ 507 (516)
||+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||+|+++++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~ 462 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCN 462 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcC
Confidence 999999999999999999999999999999999 999999999999999999999999865
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=2.1e-183 Score=1463.01 Aligned_cols=460 Identities=49% Similarity=0.866 Sum_probs=453.0
Q ss_pred cccccccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhccCCCchhHHHHhhhhhhhhhhhhHh
Q 010153 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (516)
Q Consensus 46 ~~~~~~G~~ll~~p~~NKGtaFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ 125 (516)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.|+++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 45668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccCcccchhHHHHHHHHhhhhcCCCccccccccc--chHHHHHhcCCCCCeeEEEEecCcceecCCCCCCCc
Q 010153 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (516)
Q Consensus 126 ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (516)
++++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++++|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCCeeeEeee
Q 010153 204 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 283 (516)
Q Consensus 204 mgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~ED 283 (516)
|+|||||++|||+||||||++|||||||+|||||+||+||+|+||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChh
Q 010153 284 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 363 (516)
Q Consensus 284 f~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e 363 (516)
|++||||+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 599999
Q ss_pred cccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 010153 364 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (516)
Q Consensus 364 eA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (516)
||++||||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||||||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999877778999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEEeccccccceeecccchHHHHHHH
Q 010153 444 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQVYNHNHFAFAKIPIIIFL 507 (516)
Q Consensus 444 aLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt~~p~Q~NN~yiFPGiglg~il~~ 507 (516)
||||||+++||+||||++||+|+|||||||||+||+|+||+++|||+||+|+|||||+|+++++
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~ 494 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQ 494 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHT
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=3.4e-105 Score=840.55 Aligned_cols=309 Identities=31% Similarity=0.418 Sum_probs=274.9
Q ss_pred hhccccccCcccchhHHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCCC-Ccccc
Q 010153 128 IDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGI 206 (516)
Q Consensus 128 ~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI 206 (516)
+++. +.||++||||||++|++|+ +|++++++++.+| ++|+|||||||||||||+|+ +||||
T Consensus 55 ~~~~-~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpI 116 (487)
T 3nv9_A 55 LAGF-NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGV 116 (487)
T ss_dssp CSSG-GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHH
T ss_pred CCCH-HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCch
Confidence 3444 4599999999999999986 4567777665555 69999999999999999999 58999
Q ss_pred chhhHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCC
Q 010153 207 PVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFAN 286 (516)
Q Consensus 207 ~~GKl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~ 286 (516)
||||++|||+||||| |||||||+||+| +++|| |+ +.|||+++.++||. ||||||++
T Consensus 117 meGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------de-fve~v~~~~P~fG~---InlEDf~a 172 (487)
T 3nv9_A 117 MEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DA-VIEFVQRIQHTFGA---INLEDISQ 172 (487)
T ss_dssp HHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HH-HHHHHHHHGGGCSE---EEECSCCT
T ss_pred hhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HH-HHHHHHHhCCCCCe---ecHhhcCC
Confidence 999999999999999 999999999754 45664 34 33577777777766 99999999
Q ss_pred chHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhc
Q 010153 287 HNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEE 364 (516)
Q Consensus 287 ~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~ee 364 (516)
||||+||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 173 p~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~-- 245 (487)
T 3nv9_A 173 PNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP-- 245 (487)
T ss_dssp THHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG--
T ss_pred chHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc--
Confidence 999999999998 899999999999999999999999999999999999999999999999999975 49875
Q ss_pred ccCeEEEEcCCCcccCCCccCC-----chhchhhcccc--CCCCCHHHHhcccCCcEEEEccCC-CCCCCHHHHHHHHcC
Q 010153 365 TRKKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASF 436 (516)
Q Consensus 365 A~~~i~lvDs~GLi~~~R~~~l-----~~~k~~~A~~~--~~~~~L~eav~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~ 436 (516)
+||||||++|||+++|.+ | +++|.+||++. +..++|+|||++ +|||||+|++ +|+||+|||++|+
T Consensus 246 --~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma-- 318 (487)
T 3nv9_A 246 --KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG-- 318 (487)
T ss_dssp --GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC--
T ss_pred --ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc--
Confidence 899999999999999954 6 44667888864 246799999998 7999999976 7999999999997
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEEeccccccceeecccchHHHHHHH
Q 010153 437 NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQVYNHNHFAFAKIPIIIFL 507 (516)
Q Consensus 437 ~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt~~p~Q~NN~yiFPGiglg~il~~ 507 (516)
+||||||||||| |||+||||++ +|+||||||| +++|||+||+|+|||||+|++..+
T Consensus 319 -~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~ 374 (487)
T 3nv9_A 319 -EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVR 374 (487)
T ss_dssp -SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTT
T ss_pred -CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcC
Confidence 899999999999 7999999998 5999999994 678999999999999999999865
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=3.6e-100 Score=792.62 Aligned_cols=307 Identities=30% Similarity=0.404 Sum_probs=281.4
Q ss_pred hhhHhhhhhccccccCcccchhHHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCC
Q 010153 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (516)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (516)
.+++++..++. |+|||+||||||++|++|+ ++|. +++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p~----------~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDKT----------LAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCGG----------GHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHH---hCHH----------HHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 46677778877 5589999999999999987 4554 444 7999999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 010153 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (516)
Q Consensus 201 ~~-GmgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (516)
++ |||||+||++|||+||||| |+|||||+|| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 8999999999999999999 9999999996 799999999988 77 88
Q ss_pred eEeeeCCCchHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
||||||++||||++|+|||+ +||||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999875
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCC---CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~---~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~M 433 (516)
|+ ++||++|++|||+++|.++|+++|++||++... ..+|+|+|++ +|||||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 64 899999999999999933599999999997543 4689999998 899999999 889999999999
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEEeccccccceeecccchHHHHHHH
Q 010153 434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQVYNHNHFAFAKIPIIIFL 507 (516)
Q Consensus 434 a~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt~~p~Q~NN~yiFPGiglg~il~~ 507 (516)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++..+
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~ 336 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDAR 336 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHT
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcC
Confidence 8 899999999999 89999999999 99999999 5899999999999999999999876
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.5e-96 Score=764.15 Aligned_cols=308 Identities=30% Similarity=0.413 Sum_probs=286.7
Q ss_pred hhhHhhhhhccccccCcccchhHHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCC
Q 010153 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (516)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (516)
..++++..++.|+ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 5788889999866 89999999999999987 5665544 7999999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 010153 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (516)
Q Consensus 201 ~~-GmgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (516)
++ |||||+||++|||+||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999988 77 78
Q ss_pred eEeeeCCCchHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
||||||++||||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||++||++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 6999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccC-CchhchhhccccCC---CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~-l~~~k~~~A~~~~~---~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~ 432 (516)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|++
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999997543 4689999998 999999999 79999999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEEeccccccceeecccchHHHHHHHH
Q 010153 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQVYNHNHFAFAKIPIIIFLL 508 (516)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt~~p~Q~NN~yiFPGiglg~il~~~ 508 (516)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++..+.
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a 342 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRS 342 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCS
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCC
Confidence 98 799999999999 99999999999 99999999 58999999999999999999998753
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=3.4e-70 Score=575.15 Aligned_cols=308 Identities=29% Similarity=0.453 Sum_probs=275.4
Q ss_pred hhhHhhhhhccccccCcccchhHHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCC
Q 010153 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (516)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (516)
..++++.+++.| +|||+||||||++|++|++ |+++++ +||.++|+|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~----~~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVY----EYTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHH----HHSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHH----hhcccCcEEEEEECCCeEeccccee
Confidence 456777788775 5899999999999999983 666766 4899999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCCeeeEEeecCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 010153 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (516)
Q Consensus 201 ~~-GmgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (516)
.+ ++|+|+||++||++||||| ++|+++|+.+ +|||+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcE
Confidence 97 7999999999999999999 9999999931 578888887755 44 56
Q ss_pred eEeeeCCCchHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
||||||+.|+||++|++|++ ++||||||+||||++.++|+++|++..|++++++|+||+|||+||.+|+++|...
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999986 7999999999999999999999999999999999999999999999999999763
Q ss_pred hcCCChhcccCeEEEEc----CCCcccCCCccC---CchhchhhccccC---CCCCHHHHhcccCCcEEEEccCCC-CCC
Q 010153 357 QTKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTF 425 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvD----s~GLi~~~R~~~---l~~~k~~~A~~~~---~~~~L~eav~~vkptvLIG~S~~~-g~F 425 (516)
|++ +++||++| ++||++++ +. ++++|++|++... ...+|.|+++. +|++||+|+.+ |+|
T Consensus 209 --G~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 765 37999999 99999887 24 7788888987533 24689999987 99999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEEeccccccceeecccchHHHHH
Q 010153 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQVYNHNHFAFAKIPIII 505 (516)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt~~p~Q~NN~yiFPGiglg~il 505 (516)
++++++.|+ ++||||+||||+ +||++++|.+| |++++||| +++.|+|+||+|+|||||+|++.
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999887 799999999999 89999999998 89999999 58999999999999999999987
Q ss_pred HH
Q 010153 506 FL 507 (516)
Q Consensus 506 ~~ 507 (516)
++
T Consensus 342 ~~ 343 (439)
T 2dvm_A 342 VR 343 (439)
T ss_dssp TT
T ss_pred cC
Confidence 64
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.01 E-value=4.3e-09 Score=111.20 Aligned_cols=168 Identities=11% Similarity=0.182 Sum_probs=125.3
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHHHHH---------------------HHHc-------CCCcee-
Q 010153 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF- 303 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL---------------------~ryr-------~~~~~F- 303 (516)
-+-|||...+++.+.+ ..++|+.+| |-+..=...+- .||+ ..+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 3567888888876642 345677665 44443222221 3443 369999
Q ss_pred ---------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 304 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 304 ---------nDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
+|+++||+.++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|. +++.+|.
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 899999999999999765 6899999999999999999999998854 264 5888886
Q ss_pred CCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 010153 375 KGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSE 453 (516)
Q Consensus 375 ~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E 453 (516)
+.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 421 1111211 1123579999986 99999998888899999999997 689999999997 78
Q ss_pred CCHHHH
Q 010153 454 CTAEEA 459 (516)
Q Consensus 454 ctpe~A 459 (516)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887654
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.97 E-value=3.2e-09 Score=112.19 Aligned_cols=130 Identities=17% Similarity=0.190 Sum_probs=105.5
Q ss_pred CCCcee----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccC
Q 010153 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (516)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (516)
..+|+| +|+++||+.++++|++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 89999999999999965 469999999999999999999999998643 53
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+++++|++. .+...|. ..-...+|.|+++. +|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888732 1111121 11123589999997 99999988888899999999997 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 010153 447 NPTSQSECTAEEAYT 461 (516)
Q Consensus 447 NPt~~~Ectpe~A~~ 461 (516)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 8999987754
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.48 E-value=1.7e-07 Score=97.18 Aligned_cols=217 Identities=18% Similarity=0.245 Sum_probs=129.4
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCcceecCCCCCCC--ccccchhhHHHHHHhcCCCCCCeeeEEeecCCCchhcccCcc
Q 010153 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEF 244 (516)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~ 244 (516)
+..++++.+ .+.+|+|.++++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+-.
T Consensus 27 P~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~-------- 83 (401)
T 1x13_A 27 PKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL-------- 83 (401)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC--------
T ss_pred HHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC--------
Confidence 445555554 35689999999999999999875 8899888 66776 1 5777765311
Q ss_pred ccccccCCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCC-CchHHHHHHHHcCCCceec-cCC------c----chHH
Q 010153 245 YIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDI------Q----GTAS 312 (516)
Q Consensus 245 YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~-~~~af~iL~ryr~~~~~Fn-DDi------Q----GTaa 312 (516)
.+.++.+++ ...+|-+=..+ ++.+++-+.+ ..+.+|+ +.+ | .+..
T Consensus 84 ------------------~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~~ 140 (401)
T 1x13_A 84 ------------------DDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSSM 140 (401)
T ss_dssp ------------------HHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHHH
T ss_pred ------------------HHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHHH
Confidence 233333322 11222222221 2333333322 4677773 222 2 4555
Q ss_pred HHHHHHHHHHHHh----CC----------CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 313 VVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 313 V~LAgll~Al~~~----g~----------~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
..+|| .+|++.. ++ .+...+|+|+|+|.+|.++++++.. .|. +++++|++.-.
T Consensus 141 a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~~~ 207 (401)
T 1x13_A 141 ANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRPEV 207 (401)
T ss_dssp HHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCGGG
T ss_pred HHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCHHH
Confidence 56665 4444432 22 2668999999999999999998754 252 58899986432
Q ss_pred cCCCccCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHHHc
Q 010153 379 VSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMAS 435 (516)
Q Consensus 379 ~~~R~~~l~~------------~k~~~A~~~~~------~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~ 435 (516)
.... ..+.. .+..|++.... ..+|.+.++. .|++|++... +.++++++++.|.
T Consensus 208 ~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk- 283 (401)
T 1x13_A 208 KEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK- 283 (401)
T ss_dssp HHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC-
T ss_pred HHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC-
Confidence 1100 00100 00011111000 0147788876 9999999533 2679999999997
Q ss_pred CCCCcEEEEcCCC
Q 010153 436 FNEKPLILALSNP 448 (516)
Q Consensus 436 ~~erPIIFaLSNP 448 (516)
+..+|+-+|+|
T Consensus 284 --~g~vIVdva~~ 294 (401)
T 1x13_A 284 --AGSVIVDLAAQ 294 (401)
T ss_dssp --TTCEEEETTGG
T ss_pred --CCcEEEEEcCC
Confidence 68899999987
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.07 E-value=1.1e-05 Score=86.39 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=101.5
Q ss_pred CCCcee----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccC
Q 010153 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (516)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (516)
..+|+| .|+++||+..++.|+. |.++..|.+.+++|.|+|..|.+||+.+... |.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~-----GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQA-----GA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHC-----CC-------
Confidence 479999 7899999999999886 7889999999999999999999998887653 62
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
+++++|++.. + .... +...-...++.++++. .|+++-.++...+++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 7888887421 1 1000 1111123467777775 99999988888899999999986 6889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 010153 448 PTSQSECTAEEAYTW 462 (516)
Q Consensus 448 Pt~~~Ectpe~A~~w 462 (516)
+. .|+..++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776554
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.05 E-value=2.6e-05 Score=83.14 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=97.8
Q ss_pred CCCcee----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccC
Q 010153 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (516)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (516)
..+|+| .|+..||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 6778999999888885 5679999999999999999999999987542 53
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+++++|.+.. ....|. ..-...+|.|+++. +|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6888775321 111111 11123579999987 99999988878899999999997 688998888
Q ss_pred CCCCCCCCCHHHH
Q 010153 447 NPTSQSECTAEEA 459 (516)
Q Consensus 447 NPt~~~Ectpe~A 459 (516)
+.. .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 56665443
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.53 E-value=0.0021 Score=65.81 Aligned_cols=225 Identities=15% Similarity=0.155 Sum_probs=120.5
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCcceecCCCCCCC--ccccchhhHHHHHHhcCCCCCCeeeEEeecCCC-----chhc
Q 010153 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 239 (516)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTn-----ne~L 239 (516)
+..++++.+ .+.+|+|.++++...|+.|.... |..|+.++..++ ++. +|+|.+.+- .++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCHHH
Confidence 344555544 35789999999999999998764 788888876666 333 366666532 1111
Q ss_pred ---c-cCccccccccCCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHHHHHHHHcCCCceeccCCcchHHHHH
Q 010153 240 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVL 315 (516)
Q Consensus 240 ---L-~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~L 315 (516)
+ ..-.+++.-+.- ++. +.++++.++ |- .++.+|-+....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~~-gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTKR-KI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHHT-TC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHHC-CC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 112222222221 110 112222221 11 1222222211000 00111221 11122
Q ss_pred H---HHHHHHHHhCC----------CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCC
Q 010153 316 A---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (516)
Q Consensus 316 A---gll~Al~~~g~----------~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R 382 (516)
| +++.+.+..++ .+...||+|+|+|.+|.++++.+.. .|. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----H
Confidence 3 55666666554 6789999999999999999988754 362 4889997532 1
Q ss_pred ccCCchhch-----------------hhccccC------CCCCHHHHhcccCCcEEEEcc---C--CCCCCCHHHHHHHH
Q 010153 383 KDSLQHFKK-----------------PWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEAMA 434 (516)
Q Consensus 383 ~~~l~~~k~-----------------~~A~~~~------~~~~L~eav~~vkptvLIG~S---~--~~g~Ft~evv~~Ma 434 (516)
.+.+...-. .|++... ....+.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 100000000 1111100 00127777775 99999988 3 23478999999996
Q ss_pred cCCCCcEEEEcCCC
Q 010153 435 SFNEKPLILALSNP 448 (516)
Q Consensus 435 ~~~erPIIFaLSNP 448 (516)
+..+|+-+|-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67899999864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.32 E-value=0.00024 Score=74.62 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=72.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc--------------hhchhh
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 393 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~--------------~~k~~~ 393 (516)
.+...||+|+|+|.+|..+|+++... |. +++++|++.-......+ +. .-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999988643 52 68899987532111000 10 001124
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCC
Q 010153 394 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 455 (516)
Q Consensus 394 A~~~~~------~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ect 455 (516)
++...+ ..+|.|+++. .|++|++... +.+||+|+++.|. +.++|+-+|- |-...|.|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2378999987 9999998533 4589999999997 7999999995 33445555
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.14 E-value=0.00057 Score=71.21 Aligned_cols=104 Identities=22% Similarity=0.201 Sum_probs=67.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc------CCc---hhchhhccc---
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHE--- 396 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~------~l~---~~k~~~A~~--- 396 (516)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-....-.+ .++ .-...|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 6789999999999999999988653 52 68899986421100000 000 000112211
Q ss_pred ---cCCCCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 397 ---HEPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 397 ---~~~~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
.....+|.++++. .|++|++... +.++|+|+++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 0112368899987 9999997433 3579999999997 689999998543
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.91 E-value=0.0063 Score=59.73 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=82.4
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (516)
.+-+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+... |. +++.+|+.. .+ ...
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHH
Confidence 344555556666667778899999999999999999999987542 52 688888742 11 111
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCCCCCCHHHHh
Q 010153 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQSECTAEEAY 460 (516)
Q Consensus 389 ~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~~Ectpe~A~ 460 (516)
.+ .+--..-...+|.++++. .|++|-... .+.++++.++.|. +..+++=+| +|. ++..+.|.
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a~ 256 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYAE 256 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHHH
Confidence 11 010000012368888875 999997664 5799999999886 567888888 454 45565543
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.85 E-value=0.017 Score=61.05 Aligned_cols=178 Identities=19% Similarity=0.188 Sum_probs=127.0
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH-HH-HHHHHc---CC-C-cee----------ccCCcchHHHHH
Q 010153 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-FE-LLAKYG---TT-H-LVF----------NDDIQGTASVVL 315 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a-f~-iL~ryr---~~-~-~~F----------nDDiQGTaaV~L 315 (516)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. .. +.+.|+ .. . .++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 3556777788999999999999988888899986322 22 456663 21 0 122 333455888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc-hhhc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 394 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k-~~~A 394 (516)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+-+.|++|-|+... .++... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 89999999999999999999999999999999998764 52 4467999999999765 343322 1122
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 395 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 395 ~~~~-------~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
.... ..-+-.+ +-.++.||||=+..+ +.+|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 345689999988875 69999988887 5788988888 65
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.80 E-value=0.013 Score=61.85 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=128.3
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH--HHHHHHHcC---C--Ccee----------ccCCcchHHHHH
Q 010153 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (516)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 3456677789999999999999999999999987532 225556631 1 0122 233345777777
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEE-EEcCCCcccCCCccCCchhc-hhh
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPW 393 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvDs~GLi~~~R~~~l~~~k-~~~ 393 (516)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+. | -+++ +.|++|-|+.... ++..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~-----G-------akVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL-----G-------MRVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 78888899999999999999999999999999988653 5 3566 9999999998653 43322 112
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 010153 394 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (516)
Q Consensus 394 A~~~~~~~----~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~A~~ 461 (516)
+.....+. +-.+ +-.++.|||+=++. .+.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 1112 34568999998876 569999998887 4679999998 653 44 445544
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.80 E-value=0.065 Score=57.04 Aligned_cols=182 Identities=16% Similarity=0.114 Sum_probs=126.2
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH-----HHHHHHHcCCC-cee----------ccCCcchHHHHHH
Q 010153 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTTH-LVF----------NDDIQGTASVVLA 316 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a-----f~iL~ryr~~~-~~F----------nDDiQGTaaV~LA 316 (516)
.+..|-..|...||..+.+..||+.=|--.|+...-. +..-++++... .|| .+.-.-||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 4667788899999999999999999999999975432 22333443322 232 2333447777788
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc
Q 010153 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 396 (516)
Q Consensus 317 gll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~ 396 (516)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+-|++|-|+... .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999998763 63 5566789999998764 354433211110
Q ss_pred --cCCCCCHHH-------------HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 397 --HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 397 --~~~~~~L~e-------------av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
......+.+ .+-.++.|||+=+..+ +.+|++-++.+.+. .-.+|.--+| |+
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 000011111 1234679999988875 59999999999642 2357877778 65
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.41 E-value=0.0058 Score=61.96 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=78.4
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (516)
+-.-+|-.|++-.++..+.+++..++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 34456788899999999999999999999999 5799999988652 4 358888743
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 388 ~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468999987 99999999999999999985 45677777654
No 21
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.35 E-value=0.049 Score=57.81 Aligned_cols=186 Identities=16% Similarity=0.169 Sum_probs=126.2
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCch--HHHHHHHHcC---C--Ccee----------ccCCcchHHHHH
Q 010153 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (516)
.+.+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+. . -.++ ++.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 345667788999999999999998888889998742 1125556631 1 1222 233345776677
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEE-EEcCCCcccCCCccCCchhc-hhh
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPW 393 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvDs~GLi~~~R~~~l~~~k-~~~ 393 (516)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. | -+++ +.|++|-|+.... ++..+ +.+
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----G-------akvVavsD~~G~i~dp~G--ld~~~l~~~ 285 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----G-------ARVVAVQDHTGTVYNEAG--IDPYDLLRH 285 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEECSSCEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----C-------CEEEEEEcCCcEEECCCC--CCHHHHHHH
Confidence 77888899999999999999999999999999998763 5 2455 9999999988753 33221 111
Q ss_pred ccccCCC--------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 010153 394 AHEHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (516)
Q Consensus 394 A~~~~~~--------~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~A~~ 461 (516)
......+ -+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |++ +| +++.+.
T Consensus 286 ~~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~t-~e--A~~iL~ 353 (440)
T 3aog_A 286 VQEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPTT-PA--ADDILL 353 (440)
T ss_dssp HHHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred HHhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCccccC-HH--HHHHHH
Confidence 1111111 12334 44578999998776 458888888877 4678888888 653 33 344443
No 22
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.33 E-value=0.19 Score=53.67 Aligned_cols=190 Identities=16% Similarity=0.161 Sum_probs=128.9
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHH--HHHHHHc---CCCc-ee----------ccCCcchHHHHHH
Q 010153 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTHL-VF----------NDDIQGTASVVLA 316 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~iL~ryr---~~~~-~F----------nDDiQGTaaV~LA 316 (516)
.+..|...|...||..+.+.+||..=|-=+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 34567777888899999888899998999999864322 2445554 2222 11 1122347777777
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchh----
Q 010153 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 392 (516)
Q Consensus 317 gll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~---- 392 (516)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|+... .++..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 8888899899999999999999999999999998764 52 3345899999998764 34432211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHH
Q 010153 393 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 458 (516)
Q Consensus 393 -----------~A~~~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~ 458 (516)
|+...+..+ +-.+ +-.++.||||=+.. ++.+|++-++.+-++ .-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~~-~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQN-KCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHHH-TCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHhc-CCeEEEecCCCCCC-HH--HHH
Confidence 111001100 1112 33467999998887 569999999998432 4689999999 653 55 556
Q ss_pred Hhc
Q 010153 459 AYT 461 (516)
Q Consensus 459 A~~ 461 (516)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.26 E-value=0.009 Score=60.14 Aligned_cols=92 Identities=18% Similarity=0.284 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh
Q 010153 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (516)
Q Consensus 311 aaV~LAgll~Al~~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (516)
.-++-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3467788899999999999999999999976 899999998653 42 47777652
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 390 k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
..+|.+.++. +|++|...+.++.+++|+|+ +.-+|+=++
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368899987 99999999999999999883 455666554
No 24
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.10 E-value=0.056 Score=56.94 Aligned_cols=178 Identities=14% Similarity=0.174 Sum_probs=112.6
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH--HHHHHHHc---CCC---cee----------ccCCcchHHHHH
Q 010153 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTH---LVF----------NDDIQGTASVVL 315 (516)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr---~~~---~~F----------nDDiQGTaaV~L 315 (516)
+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.+.|+ ... .++ .+.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 455677789999999999999999999999997522 13556664 211 222 222234666667
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC-----CcccCCCccCCchhc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHFK 390 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~-----GLi~~~R~~~l~~~k 390 (516)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|+.... ++...
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~G--ld~~~ 263 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNENG--IDFKE 263 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSSC--CCHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCCC--CCHHH
Confidence 77888899999999999999999999999999998763 53 334489999 99998753 43322
Q ss_pred -hhhccccCCCCCH-------HHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 391 -KPWAHEHEPVNNL-------LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 391 -~~~A~~~~~~~~L-------~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
+.+......+..+ .+.+-.++.||||=++. ++.+|++-.+.+ ...+|.--+| |+
T Consensus 264 l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 264 LLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 1111111111000 01223456788886665 457787777766 3567776676 54
No 25
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.04 E-value=0.012 Score=58.29 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc
Q 010153 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (516)
Q Consensus 315 LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A 394 (516)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46888999988889999999999999888888777755 364 679988874 222 111112222
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEEccCCC
Q 010153 395 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 422 (516)
Q Consensus 395 ~~-------~~~~~~L~eav~~vkptvLIG~S~~~ 422 (516)
.. .-+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888887 99999887754
No 26
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.01 E-value=0.014 Score=58.70 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch
Q 010153 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (516)
Q Consensus 310 TaaV~LAgll~Al~~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (516)
-.-++-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577888999999999999999999999876 899999998753 42 47778752
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 010153 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 449 (516)
Q Consensus 389 ~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (516)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368899987 99999999999999999983 455666554 443
No 27
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.00 E-value=0.21 Score=52.55 Aligned_cols=178 Identities=18% Similarity=0.175 Sum_probs=119.7
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCch--HHHHHHHHc---CC--Cceec----------cCCcchHHHHHH
Q 010153 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT--HLVFN----------DDIQGTASVVLA 316 (516)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~--~~~Fn----------DDiQGTaaV~LA 316 (516)
+.+|-..+...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. ..++. +.-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778899999999988998888889998752 112445552 21 12332 222346666666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc-hhhcc
Q 010153 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 395 (516)
Q Consensus 317 gll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k-~~~A~ 395 (516)
++-.+++..|.++++.||+|.|.|..|...|++|.+. .|. +=+-+.|++|-++.... ++... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS------KVVAVSDSRGGIYNPEG--FDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC------EEEEEECSSCEEECTTC--CCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC------EEEEEEeCCCeEECCCC--CCHHHHHHHHH
Confidence 7788889999999999999999999999999988651 253 33338999999988753 43321 11221
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 396 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 396 ~~~~~--------~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
....+ -+-.+ +-.++.||||=++. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11111 12233 45578999997776 468899888777 4668888888 65
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.94 E-value=0.014 Score=58.58 Aligned_cols=91 Identities=10% Similarity=0.237 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch
Q 010153 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (516)
Q Consensus 310 TaaV~LAgll~Al~~~g~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (516)
-.-+|-.|++..++..+ |+..++|++|+| ..|..+|.++... | ..+.+++++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~------------- 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK------------- 183 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-------------
Confidence 34577889999999999 999999999998 4899999998753 4 257778752
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 389 ~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
..+|.+.++. +|++|...+.++.+++|+++ +.-+|+=++
T Consensus 184 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 -----------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp -----------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred -----------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999998873 445666554
No 29
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.92 E-value=0.11 Score=55.63 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=121.1
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHH--HHHHHHcC---C-Ccee----------ccCCcchHHHHHHH
Q 010153 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 317 (516)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~iL~ryr~---~-~~~F----------nDDiQGTaaV~LAg 317 (516)
+..|-..|-..||..+.+..||..=|-=+|++..-.. -+.+.|+. . -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 3456667778899999988899988889999874221 24455542 1 0111 12223466666777
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEE-EEcCCCcccCCCccCCchhc------
Q 010153 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK------ 390 (516)
Q Consensus 318 ll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvDs~GLi~~~R~~~l~~~k------ 390 (516)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|+... .++..+
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 888899999999999999999999999999998663 52 455 889998888764 343221
Q ss_pred ---------hhhccccCCCC--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 391 ---------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 391 ---------~~~A~~~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
..|+...+... +-.+.. .++.||||=+.. ++.+|++-++.+-+ +.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 12221000000 001222 568999998886 56999999999854 35679999998 65
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.91 E-value=0.012 Score=59.33 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=77.7
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (516)
+-.-+|-.|++-.++..+.+++..++||+|+|. .|.-+|.++... | ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445677788999999999999999999999995 699999887652 4 367788642
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 388 ~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468999997 99999999999999999983 45677777754
No 31
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.77 E-value=0.019 Score=57.83 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh
Q 010153 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (516)
Q Consensus 311 aaV~LAgll~Al~~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (516)
.-++-.|++..++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3467788999999999999999999999875 899999998653 42 56777642
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc-CCCC
Q 010153 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL-SNPT 449 (516)
Q Consensus 390 k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL-SNPt 449 (516)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=+ +||.
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899987 99999999999999999983 45577766 4664
No 32
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.74 E-value=0.011 Score=58.79 Aligned_cols=111 Identities=22% Similarity=0.268 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc
Q 010153 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (516)
Q Consensus 315 LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A 394 (516)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 35678888888999999999999999888888877754 364 578888874 233222321 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEEccCCCCCCCH--HHHHHHHcCCCCcEEEEcC-CCC
Q 010153 395 HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTK--EVIEAMASFNEKPLILALS-NPT 449 (516)
Q Consensus 395 ~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~--evv~~Ma~~~erPIIFaLS-NPt 449 (516)
. ....++.++++. +|++|-++..+ .... +.+ ......+..+|+=++ ||.
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 0 112346666665 99999776654 2211 011 112234567888775 764
No 33
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.69 E-value=0.014 Score=59.40 Aligned_cols=112 Identities=20% Similarity=0.260 Sum_probs=79.4
Q ss_pred HHHHHHHHHHH---------hCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCc
Q 010153 314 VLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK 383 (516)
Q Consensus 314 ~LAgll~Al~~---------~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~ 383 (516)
+-.|.+-.++. .|.+++..++||+|+|. .|.-+|+++... | .++.++|++..-...|.
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ra 218 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTRG 218 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEESC
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhHH
Confidence 33445666666 68899999999999995 599999888642 4 35889999766666664
Q ss_pred cCCchhchhhccccCC---C--CCHHHHhcccCCcEEEEccCCCCC-CCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 384 DSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 384 ~~l~~~k~~~A~~~~~---~--~~L~eav~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
+.+... ++.... . .+|.++++. +|++|+..+.++. +|.|+|+ +.-+|+-++.|-
T Consensus 219 ~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 219 ESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 434311 121100 1 469999998 9999999999887 9999973 345777777664
No 34
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.67 E-value=0.23 Score=51.10 Aligned_cols=174 Identities=18% Similarity=0.182 Sum_probs=111.8
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchH--HHHHHHHcC---CCcee---ccCCcchHHHHHHHHHHHHHHh
Q 010153 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLI 325 (516)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~~~~F---nDDiQGTaaV~LAgll~Al~~~ 325 (516)
+..+-++++..|.+++.+..|+ -|-=+|++..-. --+.+.|+. +-..+ .|--.-||-=+.-++-.+++..
T Consensus 91 s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 91 DPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 3345567788888888888776 467899976432 125556652 11111 1111236666666778888889
Q ss_pred CC-CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc-CCCCCH
Q 010153 326 GG-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNL 403 (516)
Q Consensus 326 g~-~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~-~~~~~L 403 (516)
|. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..++... ...-++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~ 224 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVAL 224 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCG
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeCh
Confidence 98 8999999999999999999998754 363 67788864 111 2233211 111244
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 010153 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~A~~ 461 (516)
.+..+ ++.|+++=++ ..+.++++-++.|. -.+|.--+| |+..+|+ .++++
T Consensus 225 ~ell~-~~~DIliP~A-~~~~I~~~~~~~lk----~~iVie~AN~p~t~~eA--~~~L~ 275 (355)
T 1c1d_A 225 EDVLS-TPCDVFAPCA-MGGVITTEVARTLD----CSVVAGAANNVIADEAA--SDILH 275 (355)
T ss_dssp GGGGG-CCCSEEEECS-CSCCBCHHHHHHCC----CSEECCSCTTCBCSHHH--HHHHH
T ss_pred HHhhc-CccceecHhH-HHhhcCHHHHhhCC----CCEEEECCCCCCCCHHH--HHHHH
Confidence 45443 4689999554 46799999999993 568888888 6543343 45543
No 35
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.56 E-value=0.022 Score=57.72 Aligned_cols=95 Identities=24% Similarity=0.326 Sum_probs=74.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCC
Q 010153 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 386 (516)
Q Consensus 308 QGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l 386 (516)
.|-.-++-.|++..++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3434577788999999999999999999999876 899999998763 42 57888762 1
Q ss_pred chhchhhccccCCCCCHH--HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 387 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 387 ~~~k~~~A~~~~~~~~L~--eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.+|. +.++. +|++|...+.++.++.|+++ +.-+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1355 88887 99999999999999999873 455666554
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.51 E-value=0.067 Score=57.26 Aligned_cols=124 Identities=16% Similarity=0.218 Sum_probs=88.2
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc
Q 010153 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 384 (516)
Q Consensus 305 DDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~ 384 (516)
+.+.|.......|+ .+.+|..+.+.+++|+|.|..|.++|+.+... |+ +++.+|+... +.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH-
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH-
Confidence 34455555556662 35688899999999999999999999998653 53 6888887421 00
Q ss_pred CCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 385 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 385 ~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
+. .+...-...+|.|+++. .|++|......++++++.++.|. +..||.=.|.-. .|+.-++..+
T Consensus 294 -~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 -IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp -HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred -HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 01111112479999986 99999998778899999999986 577888788755 6777776655
No 37
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.28 E-value=0.022 Score=57.59 Aligned_cols=91 Identities=23% Similarity=0.293 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc
Q 010153 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (516)
Q Consensus 315 LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A 394 (516)
-.|++.+++..|.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788889888999999999999999888888877754 364 6899998852 11111111111221
Q ss_pred cc------cCCC---CCHHHHhcccCCcEEEEccCCC
Q 010153 395 HE------HEPV---NNLLDAVKVIKPTILIGSSGVG 422 (516)
Q Consensus 395 ~~------~~~~---~~L~eav~~vkptvLIG~S~~~ 422 (516)
.. ..+. .+|.++++. +|++|-++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 10 0112 235666765 99999777654
No 38
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.26 E-value=0.16 Score=53.66 Aligned_cols=177 Identities=19% Similarity=0.188 Sum_probs=118.1
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHHH---HHHHHc---CC--CceeccC----------CcchHHHHH
Q 010153 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TT--HLVFNDD----------IQGTASVVL 315 (516)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr---~~--~~~FnDD----------iQGTaaV~L 315 (516)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ .. ..++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456678899999999999999999999999973 222 345553 11 1222222 123655566
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEE-EEcCCCcccCCCccCC---chhch
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSL---QHFKK 391 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvDs~GLi~~~R~~~l---~~~k~ 391 (516)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|+....=++ ..++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~G-------akVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MG-------AKVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 6777888889999999999999999999999988765 25 2455 9999999988643111 11221
Q ss_pred h--------hcccc--CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 392 P--------WAHEH--EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 392 ~--------~A~~~--~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
. |.... ..+.+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 1 11000 11101123 34468999997775 568898887776 4678888888 65
No 39
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.24 E-value=0.11 Score=53.61 Aligned_cols=102 Identities=16% Similarity=0.307 Sum_probs=65.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav 407 (516)
++.+.+++|+|+|..|..+++.+... |. ++++++|+. ..| .....+.+--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999999988653 64 579988873 111 1111111111111124678888
Q ss_pred cccCCcEEEEccCCC-CCCCHHHHHH--HH-cCCCCcEEEEcCCCC
Q 010153 408 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 449 (516)
Q Consensus 408 ~~vkptvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 449 (516)
+. +|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 65 99999877654 3568888887 43 223345677788774
No 40
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.23 E-value=0.026 Score=57.05 Aligned_cols=90 Identities=26% Similarity=0.329 Sum_probs=58.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
.|++.+++..|.++++.+++|+|||.+|.+|+..|.+ .|. ++|+++++. ..+.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5788888888999999999999999888888877765 364 689999883 2211111111112211
Q ss_pred c------cCCCCCH---HHHhcccCCcEEEEccCCC
Q 010153 396 E------HEPVNNL---LDAVKVIKPTILIGSSGVG 422 (516)
Q Consensus 396 ~------~~~~~~L---~eav~~vkptvLIG~S~~~ 422 (516)
. ..+..++ .+.++. +|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566766 89999877765
No 41
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.12 E-value=0.0082 Score=52.24 Aligned_cols=109 Identities=17% Similarity=0.248 Sum_probs=64.0
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (516)
|..+|+.+++-.+-+.. +.||+|+|+|..|..+++.+.. .|. + ++++|+. .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555544333322 7899999999999988877643 242 3 8888873 111 111
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 389 ~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
..+.+.-......++.++++. +|++|-+++.+ ..++.+.+ .+.-+|+-+++|.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~~~~~~~~l------~~g~~vid~~~p~ 113 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSKTPIVEERSL------MPGKLFIDLGNPP 113 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSSCSBCGGGC------CTTCEEEECCSSC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCCcEeeHHHc------CCCCEEEEccCCc
Confidence 122221111234678898886 89998776544 24454433 2466788888874
No 42
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.00 E-value=0.042 Score=55.21 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=75.8
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (516)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++.. .|. ...+.+++|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 344567778899999999999999999999996 58888888743 210 1457777532
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 388 ~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1479999987 99999999999999999984 35677777765
No 43
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.00 E-value=0.1 Score=51.18 Aligned_cols=110 Identities=21% Similarity=0.203 Sum_probs=73.3
Q ss_pred HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCC
Q 010153 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (516)
Q Consensus 322 l~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~ 401 (516)
++..+..|.+.+++|+|+|..|..+|+.+... |. +++.+|+.- .+ ....+..-++. -...
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 44568899999999999999999999987542 53 688888741 11 11111000010 0124
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHH
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEA 459 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A 459 (516)
+|.+.++. .|++|-.... +.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 9999977664 699999888885 567888888632 34555444
No 44
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.91 E-value=0.0089 Score=59.35 Aligned_cols=123 Identities=19% Similarity=0.329 Sum_probs=71.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHhccc
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~~L~eav~~v 410 (516)
||.|+|||+.|.++|..++. .|. ...++++|.+---..+...++.+.. ++... ... .+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~-~~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGG-HSELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEEC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECC-HHHhCC-
Confidence 89999999999999987754 254 2479999985210000000011110 11111 001 23 356776
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 010153 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 473 (516)
Q Consensus 411 kptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGS 473 (516)
+|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||. ....+.+.+.+.-.-+|.+|.
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~---~~~~~~~~~~~~~~rviG~gt 140 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPV---DLLTDLATQLAPGQPVIGSGT 140 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSH---HHHHHHHHHHSCSSCEEECTT
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCch---HHHHHHHHHhCChhcEEeCCc
Confidence 8998865543321 2278888898888888887799996 444444555544455666653
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.87 E-value=0.7 Score=49.15 Aligned_cols=178 Identities=17% Similarity=0.184 Sum_probs=118.4
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHH--HHHHHHc---CC--Cceecc----------CCcchHHHHHHH
Q 010153 255 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT--HLVFND----------DIQGTASVVLAG 317 (516)
Q Consensus 255 g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~iL~ryr---~~--~~~FnD----------DiQGTaaV~LAg 317 (516)
..|-..|-..||..+.+..||..-|-=+|++..-.. -+.+.|+ +. .-|+-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 356667777899999888999999999999876221 1334443 21 122211 123366666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCC-chh-------
Q 010153 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 389 (516)
Q Consensus 318 ll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l-~~~------- 389 (516)
+-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|+... .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 788889999999999999999999999999988764 53 3344789999988764 34 221
Q ss_pred -c-------hhhccc--cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 390 -K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 390 -k-------~~~A~~--~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
| ..|+.. .+.+ +-.+ +-.++.|+|+=+.. ++.+|++-.+.+.+ |.-.+|.--+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i-~~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFF-PGEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEE-ETCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEe-Cchh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 0000 0011 22468999997775 56999999999964 23578988888 65
No 46
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.78 E-value=0.027 Score=55.83 Aligned_cols=87 Identities=23% Similarity=0.257 Sum_probs=57.5
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc
Q 010153 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (516)
Q Consensus 316 Agll~Al~~~g-~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A 394 (516)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++++++|+. .++ .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999998888887754 353 579988874 222 111111111
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEEccCCC
Q 010153 395 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (516)
Q Consensus 395 ~---~~~~~~~L~eav~~vkptvLIG~S~~~ 422 (516)
. ......++.++++. +|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011246666765 99999887765
No 47
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.71 E-value=0.075 Score=57.06 Aligned_cols=110 Identities=17% Similarity=0.244 Sum_probs=78.2
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (516)
|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+.. .|+ +++.+|+... +. +..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~~--~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----CA--LQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----HH--HHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----hH--HHH
Confidence 3333444552 3678999999999999999999999998753 253 6888887421 00 000
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 389 ~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
+...-...+|.|+++. .|+++......++++++.++.|. +..||.=.|...
T Consensus 317 -----~~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 -----AMEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp -----HTTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred -----HHcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0111112479999986 99999998777899999999996 577888788755
No 48
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.69 E-value=0.043 Score=53.55 Aligned_cols=145 Identities=19% Similarity=0.299 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhhC--------CCeeeEeeeCCCchHHHHHH--HHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCccc
Q 010153 262 LDEFMSAVKQNYG--------EKVLIQFEDFANHNAFELLA--KYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 331 (516)
Q Consensus 262 idefv~av~~~fG--------p~~lIq~EDf~~~~af~iL~--ryr~~~~~FnDDiQGTaaV~LAgll~Al~~~g~~L~d 331 (516)
+++|++.++..|. -..++.+=|- ++.|..+=. -...+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 5677777664442 1234555566 666665411 00011 3344442 3677777654 5788
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
+++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.+.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999999888765 364 679999884 233222221 1111 123467788876
Q ss_pred CcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 412 PTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 412 ptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
+|++|-++..+ -.+.++.+ .+..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l------~~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSL------KNLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHH------TTCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeeC
Confidence 99999766433 13444443 25667776653
No 49
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.36 E-value=0.15 Score=52.57 Aligned_cols=159 Identities=14% Similarity=0.119 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhhCCCeeeEeeeCCCchHHHHHHHHcCCCcee-ccC---------CcchHHHHHHHHHHHHHHh-CC
Q 010153 259 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVF-NDD---------IQGTASVVLAGVVAALKLI-GG 327 (516)
Q Consensus 259 ~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~F-nDD---------iQGTaaV~LAgll~Al~~~-g~ 327 (516)
++++..|.+++.+..|+ -|-=+|++..-. .+...-+++.++ --- -.-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677888888887775 466788875432 333333333111 111 1235555555666666664 76
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 010153 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (516)
Q Consensus 328 -~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ea 406 (516)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ . +.+..+.+.|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~----~---~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN----K---AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC----H---HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC----H---HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999998653 63 57788852 1 11222222221 111233343
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
.. .+.|++|=++ ..+.++++.++.| ...+|.--+| |+
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 32 5789999654 4569999988888 3567776776 54
No 50
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.12 E-value=0.1 Score=52.17 Aligned_cols=101 Identities=23% Similarity=0.299 Sum_probs=65.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCC---CCCHHHHhc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~---~~~L~eav~ 408 (516)
||+|+|| |..|..++..|+. .|+ ...++++|.+-. .+...+|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 367999998641 1100012211100 0 0011 136888999
Q ss_pred ccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 409 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 409 ~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
+ +|++|=+.+.+ | ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 99988554433 2 24677888888888898888899997
No 51
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.12 E-value=0.37 Score=50.03 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=83.5
Q ss_pred CCceeccCCc---chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 299 THLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.|.+.|.--- .+|=-+++.+++..|..|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 5666664332 344458999999999999999999999999999999999988642 64 57888763
Q ss_pred CcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc---C-----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 376 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 376 GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
.- . . . ......+|.|+++. .|+++=.- . ..++++++.++.|. +..++.=.|.
T Consensus 149 ~~------~----~--~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A----R--E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H----H--S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h----h--c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 0 0 01123579999886 89887542 1 34688999998886 5678776765
No 52
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.08 E-value=0.062 Score=52.94 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=62.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch---hchhhccccCC--CCCHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAHEHEP--VNNLLDA 406 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~---~k~~~A~~~~~--~~~L~ea 406 (516)
.||.|+|||+.|.++|..|+.. |+ ..+++++|++ .++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDAN----EAKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS----HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCC----HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999998664 54 2579999984 111111110 00011100001 1456 67
Q ss_pred hcccCCcEEEEccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 407 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 407 v~~vkptvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIFaLSNPt 449 (516)
++. +|++|=+...+ |.. -+++++.|.+++.+.+|+-+|||.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~ 125 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPV 125 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcH
Confidence 775 89888554432 211 268888898888888888899997
No 53
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.97 E-value=0.084 Score=53.49 Aligned_cols=96 Identities=19% Similarity=0.283 Sum_probs=64.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHH
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 404 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~----~~~~~L~ 404 (516)
++..+++|+|||.+|.+++..+.. .| | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999988754 35 2 68888874 222 222222232210 0113567
Q ss_pred HHhcccCCcEEEEccCCCCC-----CCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 405 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
+.++. .|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77774 9999998876542 5888888886 45677777754
No 54
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.70 E-value=0.15 Score=49.47 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
.|++.+++..|..+++.+++|+|+|.+|.++|..+... |. +++++|+. .++ .....+.+.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999999888653 42 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 010153 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIFaLSN 447 (516)
.....++.++++. +|++|-+...+ ... ++.+. .....+..+|+-++.
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~-~~~~~~~~i~-~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG-LKDEDPEIFN-YDLIKKDHVVVDIIY 222 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT-SSTTCCCSSC-GGGCCTTSEEEESSS
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC-CCCCCCCCCC-HHHcCCCCEEEEcCC
Confidence 0112367788875 99999776654 221 11221 112234567777776
No 55
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.68 E-value=0.097 Score=52.69 Aligned_cols=120 Identities=18% Similarity=0.259 Sum_probs=76.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc----CCchhchhhccccCCC---CCHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLL 404 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~~A~~~~~~---~~L~ 404 (516)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+- ++-+ .+.+.. .+......+ .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 1399999852 2111 011111 111111122 5788
Q ss_pred HHhcccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--
Q 010153 405 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS-- 463 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt-- 463 (516)
+++++ +|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..- +.+-+.+.+
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~---~t~~~~~~~~~ 148 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC---MVKVMCEASGV 148 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCC
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH---HHHHHHHhcCC
Confidence 89987 99998655333 32 247888889999988888888999732 344454443
Q ss_pred CCcEEEecC
Q 010153 464 KGRAIFASG 472 (516)
Q Consensus 464 ~G~aifAsG 472 (516)
.-.-+|++|
T Consensus 149 ~~~rviG~g 157 (331)
T 1pzg_A 149 PTNMICGMA 157 (331)
T ss_dssp CGGGEEECC
T ss_pred ChhcEEecc
Confidence 233577776
No 56
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.61 E-value=0.12 Score=50.45 Aligned_cols=98 Identities=15% Similarity=0.251 Sum_probs=63.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
..||.|+|+|..|.++|..+... |.. ..+++++|++ .++ +...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~~---~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LDK---LDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SHH---HHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HHH---HHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 642 3478888873 111 22222211 01112578888876
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTS 450 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~ 450 (516)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 78877 34344 4567888887754 45668888887764
No 57
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.38 E-value=0.74 Score=45.94 Aligned_cols=170 Identities=13% Similarity=0.036 Sum_probs=101.2
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhc
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 358 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~----------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~ 358 (516)
..++|.|----. +|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 456666654322 344578888888775 36789999999999999999999988642
Q ss_pred CCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHHHH
Q 010153 359 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 434 (516)
Q Consensus 359 G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~Ma 434 (516)
|+ +++.+|+.. .. . ..+ .+ .-...++.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~~---~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----IR---E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----CH---H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----ch---h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 53 688888631 10 0 000 01 1111379999986 898885432 34688899999986
Q ss_pred cCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCceeeCCEEeccccccceeecccchHH
Q 010153 435 SFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQVYNHNHFAFAKIP 502 (516)
Q Consensus 435 ~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifA-----sGSPf~pv~~~Grt~~p~Q~NN~yiFPGiglg 502 (516)
+..++.-.|.-.---|..-.+|++ +|+.--| .+-|.+ +.-...--+..|+.+-|=+|-.
T Consensus 224 ---~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ga~lDv~~~eP~~----~~~~~~L~~~~nviltPH~~~~ 287 (313)
T 2ekl_A 224 ---DNVIIVNTSRAVAVNGKALLDYIK--KGKVYAYATDVFWNEPPK----EEWELELLKHERVIVTTHIGAQ 287 (313)
T ss_dssp ---TTEEEEESSCGGGBCHHHHHHHHH--TTCEEEEEESCCSSSSCC----SHHHHHHHHSTTEEECCSCTTC
T ss_pred ---CCCEEEECCCCcccCHHHHHHHHH--cCCCcEEEEecCCCCCCC----CcccchHhhCCCEEECCccCcC
Confidence 567888777732112222234443 3443211 233322 1000001235688888877643
No 58
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.38 E-value=0.11 Score=51.42 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=61.0
Q ss_pred HHHHHHHHHH-hhCCCeeeEeeeCCCchHHHHHHHHcC--------CCceeccC--Ccc--hHHHHHHHHHHHHHHhCCC
Q 010153 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD--IQG--TASVVLAGVVAALKLIGGT 328 (516)
Q Consensus 262 idefv~av~~-~fGp~~lIq~EDf~~~~af~iL~ryr~--------~~~~FnDD--iQG--TaaV~LAgll~Al~~~g~~ 328 (516)
+.++++.++. .|.+ ++.--=-...+++++++... +..++++| ..| |- -.|++.+++..|.+
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~ 123 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD---GEGLVQDLLAQQVL 123 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH---HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH---HHHHHHHHHHhCCC
Confidence 5677776653 4533 33322222334555443321 22344444 234 33 46788888888999
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+++.+++|+|||.+|.+++..|.+ .|. ++++++|+.
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999999888888777654 364 689998874
No 59
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.37 E-value=0.1 Score=51.87 Aligned_cols=104 Identities=19% Similarity=0.301 Sum_probs=66.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
.|++.+|+..|.++++.+++|+|||.||.+++..|.+ .|. ++|+++++. .+|.+.|. ..+..
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~~La---~~~~~ 168 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTSEIY---GEFKV 168 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHHHHC---TTSEE
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HhcCc
Confidence 7899999988999999999999999998888887765 364 689998873 22211111 11100
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC---C----CCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 010153 396 EHEPVNNLLDAVKVIKPTILIGSSGVG---R----TFTKEVIEAMASFNEKPLILALS-NPT 449 (516)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~---g----~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (516)
....+|.+ +++|++|-++..+ . .+..+.++ +..+|+=+. ||.
T Consensus 169 --~~~~~l~~----l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 169 --ISYDELSN----LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp --EEHHHHTT----CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred --ccHHHHHh----ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 01112333 2699999877553 1 14444442 467888765 764
No 60
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.32 E-value=0.63 Score=49.89 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=76.5
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCC
Q 010153 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 401 (516)
Q Consensus 323 ~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~ 401 (516)
+..+..+.+.+|+|+|+|..|.++|+.+.. .|. +++.+|+.- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 445668899999999999999999988754 252 688888631 11112221 11124
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
++.++++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 99999998888899999999996 567887777765 4676655443
No 61
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.30 E-value=0.45 Score=49.46 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=86.2
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 298 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
..|.+.|.-- +.+|=-+++.+++..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 4566666543 2445568999999999999999999999999999999999998643 64 6777876
Q ss_pred CCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC--------CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 375 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 375 ~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~--------~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.. . . .. ......+|.|+++. .|+++=.-- ..++|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 21 0 0 00 11223579999987 898874321 34688999999986 677888777
Q ss_pred CCC
Q 010153 447 NPT 449 (516)
Q Consensus 447 NPt 449 (516)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 643
No 62
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.25 E-value=0.11 Score=55.13 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=28.7
Q ss_pred HHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010153 427 KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (516)
Q Consensus 427 ~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~ai 468 (516)
.|+++.|.++++.-+++=.|||. +-+|- -+.++++=++|
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~v 178 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANII 178 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEE
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeE
Confidence 68999999999999999999997 44443 33445443443
No 63
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.25 E-value=0.18 Score=47.93 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=61.9
Q ss_pred hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc--cCCCccCCc-hhchhhcccc--CC
Q 010153 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 399 (516)
Q Consensus 325 ~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi--~~~R~~~l~-~~k~~~A~~~--~~ 399 (516)
...++...||.|+|+|..|.++|..|... | .++++.|++--- .......+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999998763 5 368888874211 000000000 0012233221 12
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHH-HcCCCCcEEEEcCCCC
Q 010153 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 449 (516)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 449 (516)
..++.|+++. +|++| ++.... -..++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999987 89887 444332 334666665 3333677999999974
No 64
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.21 E-value=0.06 Score=53.76 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=75.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHhccc
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~--~~~~~L~eav~~v 410 (516)
||.|+|||..|.++|..|+.. |+ .+.+.++|.+-=..++-.-++.+...+|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 25799999742111100001222111121110 00135 788887
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 010153 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (516)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (516)
+|++|=+.+.+ |- .-+++++.|.+++.+-+|+-.|||. .....-+++.+. -+-+|++|
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv---d~~t~~~~k~~g~p~~rviG~g 143 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKESGKPRNEVFGMG 143 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHHSCCCTTSEEECS
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc---hHHHHHHHHhcCCCHHHEeecc
Confidence 89887444433 32 1256778888999999999999996 455666665531 23455655
No 65
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.11 E-value=0.12 Score=51.08 Aligned_cols=158 Identities=15% Similarity=0.206 Sum_probs=87.2
Q ss_pred HHHHHHHHHH-hhCCCeeeEeeeCCCchHHHHHHHHc---------CCCceeccC-CcchHHHHHHHHHHH-HHHhCCCc
Q 010153 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYG---------TTHLVFNDD-IQGTASVVLAGVVAA-LKLIGGTL 329 (516)
Q Consensus 262 idefv~av~~-~fGp~~lIq~EDf~~~~af~iL~ryr---------~~~~~FnDD-iQGTaaV~LAgll~A-l~~~g~~L 329 (516)
+.++++.++. .|++ ++.--=-...+++++++.. +.+ ++.|+ ..|.-.= -.|++.+ ++..|.++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 5677777653 4544 4433323334555555432 122 33333 3453222 3588888 88888899
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~ 409 (516)
++.+++|+|||.+|.+++..|.+ .|. ++|+++++. .++. ....+.+....-...++.+.-.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~----~~~a---~~la~~~~~~~~~~~~~~~l~~- 179 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD----MAKA---LALRNELDHSRLRISRYEALEG- 179 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC----HHHH---HHHHHHHCCTTEEEECSGGGTT-
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHH---HHHHHHhccCCeeEeeHHHhcc-
Confidence 99999999999888888777755 364 689988873 2221 1111222110000012222111
Q ss_pred cCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEc-CCCC
Q 010153 410 IKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILAL-SNPT 449 (516)
Q Consensus 410 vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaL-SNPt 449 (516)
-++|++|-++..+ -.+..+.+ .+..+|+=+ .||.
T Consensus 180 ~~~DivInaTp~gm~~~~~~i~~~~l------~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 180 QSFDIVVNATSASLTADLPPLPADVL------GEAALAYELAYGKG 219 (272)
T ss_dssp CCCSEEEECSSGGGGTCCCCCCGGGG------TTCSEEEESSCSCC
T ss_pred cCCCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeecCCC
Confidence 4699999877653 12444332 356788877 5664
No 66
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.06 E-value=0.57 Score=50.56 Aligned_cols=179 Identities=18% Similarity=0.241 Sum_probs=118.4
Q ss_pred CChhhhHHHHHHHHHHHHH--hhCCCeeeEeeeCCCchH--HHHHHHHcC---CC------ceeccC---------Ccch
Q 010153 253 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNA--FELLAKYGT---TH------LVFNDD---------IQGT 310 (516)
Q Consensus 253 ~~g~~Y~~~idefv~av~~--~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~~------~~FnDD---------iQGT 310 (516)
.+..|-..+...||+.+.+ ..||..-|-=+|++..-. --+.+.|+. .. ++-..- -.-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 3567788889999999985 788988898999987532 126677752 11 111111 1234
Q ss_pred HHHHHHHHHH------HHHHhCC--CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCC
Q 010153 311 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (516)
Q Consensus 311 aaV~LAgll~------Al~~~g~--~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R 382 (516)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|+...
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4444444443 4456775 58999999999999999999998763 53 4556899999999764
Q ss_pred ccCCchhch-hhccccCCC------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010153 383 KDSLQHFKK-PWAHEHEPV------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (516)
Q Consensus 383 ~~~l~~~k~-~~A~~~~~~------~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (516)
.++..+. .+......+ ..+.+.+-.++.||||=+..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3443221 111111110 001112445789999988876 69999998887 4789999999 54
No 67
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.02 E-value=0.19 Score=50.27 Aligned_cols=120 Identities=16% Similarity=0.263 Sum_probs=73.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav~~v 410 (516)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+...++.. +... -....++ +++++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998653 54 368999998631 1111101221 2111 0111466 77887
Q ss_pred CCcEEEEccCCC--C-----------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 010153 411 KPTILIGSSGVG--R-----------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (516)
Q Consensus 411 kptvLIG~S~~~--g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (516)
+|++|=..+.+ | -.-+++++.|.++++.-+|+-.|||. -+..+-+++.+. -.-+|++|
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~---~~~t~~~~~~~~~p~~rviG~g 150 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPV---EIMTYVTWKLSTFPANRVIGIG 150 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSH---HHHHHHHHHHHCCCGGGEEECT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChH---HHHHHHHHHhcCCCHHHeeCCC
Confidence 99998555442 1 02467888888889999988899997 344455555321 12356665
No 68
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.96 E-value=0.09 Score=52.07 Aligned_cols=100 Identities=14% Similarity=0.313 Sum_probs=64.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccC----CchhchhhccccCCC---CCHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEHEPV---NNLL 404 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~----l~~~k~~~A~~~~~~---~~L~ 404 (516)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++-+. +... ..+......+ .++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 54 2599999852 21110 1000 0111101111 456
Q ss_pred HHhcccCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 405 DAVKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
++++. +|++|=+.+.+. .+.+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 77876 899886554332 134678888888888899999999963
No 69
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.93 E-value=0.18 Score=44.22 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=54.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc-hhchhhcc-ccCCCCCHH
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~~A~-~~~~~~~L~ 404 (516)
+.+...+|+|+|+|..|..+|+.+... | .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 455678999999999999999988652 4 3688898742 2211121 11111111 101111233
Q ss_pred HH-hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 405 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 405 ea-v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
++ ++ ++|++|-+.... ..+..+++.+.+.+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 44 489999776643 333444444443345555555555
No 70
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.80 E-value=0.056 Score=53.97 Aligned_cols=114 Identities=16% Similarity=0.261 Sum_probs=67.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC-CCHHHHhccc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~-~~L~eav~~v 410 (516)
.||.|+|||..|.++|..+... |+ ...++++|.+--..+....++.+. .++......+ .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776543 54 257999998521111000011111 1111100000 134567776
Q ss_pred CCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 411 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 411 kptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
+|++|=+.+.+. ...+++++.|.++++.-++|-.|||. -...+-+++
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv---~~~~~~~~~ 135 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV---DILTYATWK 135 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch---HHHHHHHHH
Confidence 999985544432 23467888888888888888899996 334444544
No 71
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.72 E-value=0.054 Score=54.28 Aligned_cols=111 Identities=13% Similarity=0.066 Sum_probs=66.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC--Ccc--cCCCccCCchhchhhccccCCCCCHHHH
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~--GLi--~~~R~~~l~~~k~~~A~~~~~~~~L~ea 406 (516)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ ..- ..+...+|.+.-.++..+-....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 59999998 9999998887754 243111112479999975 100 0000000111001222221122578999
Q ss_pred hcccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 407 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 407 v~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
+++ .|++|=+.+.+ | ..++++++++.+++ .+.+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 997 89988555543 2 13678889999886 787777789996
No 72
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.70 E-value=0.18 Score=49.77 Aligned_cols=48 Identities=33% Similarity=0.396 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
.|++.+++..|.++++.|++++|||-|+-+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4678889999999999999999999999999877755 364 68999987
No 73
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.66 E-value=0.87 Score=47.75 Aligned_cols=114 Identities=22% Similarity=0.262 Sum_probs=81.0
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCchHHH---HHHHHc---CCC-c---eeccC----------CcchHHH
Q 010153 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 313 (516)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr---~~~-~---~FnDD----------iQGTaaV 313 (516)
+.+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456678889999999998899888888999873 222 334552 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEE-cCCCccc
Q 010153 314 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV-DSKGLIV 379 (516)
Q Consensus 314 ~LAgll~Al~~~g~~-L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lv-Ds~GLi~ 379 (516)
+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-+.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 666788889999999 9999999999999999999988641 253 45444 8877543
No 74
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.62 E-value=0.09 Score=52.87 Aligned_cols=127 Identities=17% Similarity=0.269 Sum_probs=74.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC---CCHHHHhc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~---~~L~eav~ 408 (516)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+-=...+-...+.+...++.. ...+ .++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-----g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-----DL------GDVYMFDIIEGVPQGKALDLNHCMALIGS-PAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECSSTTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCHHHHHHHHHHHHhHhhccCC-CCEEEECCCH-HHHC
Confidence 5899999999999999887653 54 13999998521000000011111111111 1111 466 7888
Q ss_pred ccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecC
Q 010153 409 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (516)
Q Consensus 409 ~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsG 472 (516)
+ +|++|=+.+.+ |. .-+++.+.+.++++.-+|+--|||.+ ...+-+.+.+ .-.-++++|
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~---~~t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD---AMVYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH---HHHHHHHHHHCCCGGGEEESC
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH---HHHHHHHHhcCCChhhEEEeC
Confidence 7 89988554322 21 24677888888888888766799973 2344444433 234577877
Q ss_pred CCCC
Q 010153 473 SPFD 476 (516)
Q Consensus 473 SPf~ 476 (516)
.+.+
T Consensus 157 t~Ld 160 (328)
T 2hjr_A 157 GVLD 160 (328)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 6555
No 75
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.44 E-value=0.2 Score=47.96 Aligned_cols=104 Identities=22% Similarity=0.264 Sum_probs=64.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
.|++.+++..|.++++ +++|+|+|.+|..+|..+... |. +++++|++ .++ .....+.+..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~-----g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREA-----GL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889988889999 999999999999999887542 42 58888874 111 1111111211
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 010153 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIFaLSN 447 (516)
. ..++.++ +. +|++|-+...+ ... ++++. .....+..+|+-++.
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~-~~~~~~~~l~-~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG-LEDPSASPLP-AELFPEEGAAVDLVY 207 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT-TTCTTCCSSC-GGGSCSSSEEEESCC
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC-CCCCCCCCCC-HHHcCCCCEEEEeec
Confidence 1 3467777 54 99999776654 211 01221 112234567777763
No 76
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=92.43 E-value=0.11 Score=54.98 Aligned_cols=106 Identities=16% Similarity=0.276 Sum_probs=66.9
Q ss_pred cccceEEEeCcchH--HHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc---cCCCCCH
Q 010153 329 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---HEPVNNL 403 (516)
Q Consensus 329 L~d~riv~~GAGsA--g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~---~~~~~~L 403 (516)
++..||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- ++-+.+....+.+.+. -....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888752 122 2 3899999751 1100000000011110 0112589
Q ss_pred HHHhcccCCcEEEEccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEEcCC
Q 010153 404 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
.||+++ +|++|=.-.+| |. .-.++++.|.+++.+-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 99888443322 22 13577888889999999999999
Q ss_pred CC
Q 010153 448 PT 449 (516)
Q Consensus 448 Pt 449 (516)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 97
No 77
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.39 E-value=0.12 Score=51.86 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=74.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc----CCchhchhhccccCCC---CCHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLL 404 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~~A~~~~~~---~~L~ 404 (516)
.||.|+|||+.|.++|.+++.. |+- +++|+|.+ .++-+ .+.+.. .+......+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTN-VMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHH-HHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhh-hhcCCCcEEEECCCH-
Confidence 4899999999999999988763 541 39999975 22111 111110 111101111 467
Q ss_pred HHhcccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--
Q 010153 405 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS-- 463 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt-- 463 (516)
+++++ +|++|=+.+.+ |. +-+++.+.|.++++.-+|+-.|||... ..+-+.+.+
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~---~t~~~~~~~g~ 142 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV---MVQLLHQHSGV 142 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH---HHHHHHHHHCC
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH---HHHHHHHhcCC
Confidence 78887 99998554332 31 357788888888888887777999743 244444443
Q ss_pred CCcEEEecCCCC
Q 010153 464 KGRAIFASGSPF 475 (516)
Q Consensus 464 ~G~aifAsGSPf 475 (516)
.-.-+|++|...
T Consensus 143 ~~~rviG~gt~l 154 (322)
T 1t2d_A 143 PKNKIIGLGGVL 154 (322)
T ss_dssp CGGGEEECCHHH
T ss_pred ChHHEEeccCcc
Confidence 234577776443
No 78
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.38 E-value=0.11 Score=52.72 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=60.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc----cCCCCCH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~----~~~~~~L 403 (516)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3788999999999999999988754 352 688888741 11 11111111110 0112357
Q ss_pred HHHhcccCCcEEEEccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 404 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788875 999998876543 46899999996 34566666644
No 79
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.36 E-value=1.6 Score=43.84 Aligned_cols=121 Identities=14% Similarity=0.152 Sum_probs=77.5
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHHh-------------------------CCCcccceEEEeCcchHHHHHHHH
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 349 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~~-------------------------g~~L~d~riv~~GAGsAg~GIA~l 349 (516)
..+++.|----. +|=-+++.+|+..|.. |..|.+.+|.|+|+|..|..+|+.
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 356666654323 3344678888776621 457889999999999999999998
Q ss_pred HHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCC
Q 010153 350 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTF 425 (516)
Q Consensus 350 l~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~F 425 (516)
+... |. +++.+|+.. .. ... ..+ .-...++.++++. +|+++=.-. ..+++
T Consensus 169 l~~~-----G~-------~V~~~d~~~----~~----~~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKGF-----NM-------RILYYSRTR----KE----EVE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHHT-----TC-------EEEEECSSC----CH----HHH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHhC-----CC-------EEEEECCCc----ch----hhH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 8642 53 688888741 11 000 011 0112478898886 898874321 12578
Q ss_pred CHHHHHHHHcCCCCcEEEEcCC
Q 010153 426 TKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSN 447 (516)
+++.++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888885 5667776664
No 80
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.27 E-value=1.1 Score=44.98 Aligned_cols=122 Identities=14% Similarity=0.157 Sum_probs=78.9
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~~---------------------g~~L~d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
..++|.|----. +|=-+++.+|+..|.. |..|.+.+|.|+|+|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 467777764333 3444788888887632 356889999999999999999998753
Q ss_pred HHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHH
Q 010153 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (516)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~ev 429 (516)
.|. +++.+|+.. .+ ....+ .+ ... ..++.|+++. .|+++=.-. ..++++++.
T Consensus 177 ----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~-~~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAE-FVSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSS----CC---HHHHH-TT--TCE-ECCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCC----cc---hhHHH-hc--Cce-eCCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 253 588888631 11 11111 11 001 1278898886 898874432 235788888
Q ss_pred HHHHHcCCCCcEEEEcCC
Q 010153 430 IEAMASFNEKPLILALSN 447 (516)
Q Consensus 430 v~~Ma~~~erPIIFaLSN 447 (516)
++.|. +..++.-.|.
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88885 4567766665
No 81
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=92.25 E-value=0.071 Score=52.90 Aligned_cols=124 Identities=15% Similarity=0.250 Sum_probs=73.6
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC--CCcccCCCccCCchhchhhccccCC-CCCHHHHh
Q 010153 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAV 407 (516)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~~A~~~~~-~~~L~eav 407 (516)
.||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..++.+... +..+..- ..+ .+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHh
Confidence 3899999 99999999887754 243 257999997 21000000001211111 1111000 023 6778
Q ss_pred cccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEec
Q 010153 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFAS 471 (516)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAs 471 (516)
++ +|++|=+.+.+ |. .+++++++|.+++.+.+|+--|||. ....+-+++.+. -+-+|++
T Consensus 69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv---~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV---DLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH---HHHHHHHHHHSSSCGGGEEEC
T ss_pred CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHHcCCCHHHeeec
Confidence 76 99998666544 32 5678889999999999999999996 445555555431 1235555
Q ss_pred C
Q 010153 472 G 472 (516)
Q Consensus 472 G 472 (516)
|
T Consensus 144 g 144 (303)
T 1o6z_A 144 G 144 (303)
T ss_dssp C
T ss_pred c
Confidence 4
No 82
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.23 E-value=0.1 Score=52.08 Aligned_cols=128 Identities=14% Similarity=0.269 Sum_probs=76.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-cccCCCCCHHHHhc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 408 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-~~~~~~~~L~eav~ 408 (516)
...||.|+|||..|..+|-.|+.. |+ ...++++|.+-=...+...++.+. .++. .+..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 457999999999999998876542 54 268999997510001100012222 2332 11000013477788
Q ss_pred ccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 010153 409 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (516)
+ +|++|=+.+.+.. .=+++++.|.+++..-+|+-.|||. -...+-+++.+. -.-+|.+|
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~t~~~~k~~~~p~~rviG~g 148 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV---DILAYATWKFSGLPKERVIGSG 148 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECT
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHhCCCHHHEEecC
Confidence 7 9999855544421 2246777788889999999999996 445555555431 12456665
Q ss_pred C
Q 010153 473 S 473 (516)
Q Consensus 473 S 473 (516)
.
T Consensus 149 t 149 (317)
T 3d0o_A 149 T 149 (317)
T ss_dssp T
T ss_pred c
Confidence 3
No 83
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.18 E-value=0.12 Score=52.24 Aligned_cols=127 Identities=15% Similarity=0.266 Sum_probs=74.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
..||.|+|||+.|..+|-+|+.. ++ ...++|+|.+-=-..+...+|.+. .+|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC-
Confidence 36999999999999998887543 44 268999998410000000012111 1222111000234677887
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 010153 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (516)
Q Consensus 411 kptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (516)
+|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||. -...+-+++.+. -.-+|.+|.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 151 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEEccc
Confidence 9999865554421 2345677788889999999999997 445555555431 124555543
No 84
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.06 E-value=0.16 Score=49.09 Aligned_cols=104 Identities=23% Similarity=0.309 Sum_probs=62.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccC--CCc-----cCCchhchhhc-----
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS--SRK-----DSLQHFKKPWA----- 394 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~--~R~-----~~l~~~k~~~A----- 394 (516)
.+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+=.+ .|. +++-..|..-+
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 92 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLT 92 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHH
Confidence 357789999999999999999998774 75 68999998632111 110 00111111111
Q ss_pred ccc---------CCC--CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 010153 395 HEH---------EPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (516)
Q Consensus 395 ~~~---------~~~--~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (516)
+-. ... .++.+.++. .|++|-++.- .-++..+...+.....|+|.+-
T Consensus 93 ~~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 93 QLNPDIQLTALQQRLTGEALKDAVAR--ADVVLDCTDN--MATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HHCTTSEEEEECSCCCHHHHHHHHHH--CSEEEECCSS--HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHCCCCEEEEEeccCCHHHHHHHHhc--CCEEEECCCC--HHHHHHHHHHHHHhCCCEEEEe
Confidence 000 011 135566665 8999876542 2355666666666678888754
No 85
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.98 E-value=0.14 Score=51.34 Aligned_cols=126 Identities=13% Similarity=0.240 Sum_probs=74.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
.||.|+|||..|..+|-+|+.. ++ ...++|+|.+-=-..+-..+|.+. .+|..+..-..+-.+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 6999999999999988887553 44 268999998310000000012111 1232211000234677887
Q ss_pred CcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 010153 412 PTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (516)
Q Consensus 412 ptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (516)
+|++|=+.+.+ | -.-+++++.|.+++..-+|+-.|||. -...+-+++.+. -+-+|.+|.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 147 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV---DILTYATWKFSGFPKERVIGSGT 147 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEeccc
Confidence 99998555443 2 12345777788889999999999997 445555555431 124566654
No 86
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.92 E-value=0.21 Score=49.73 Aligned_cols=98 Identities=16% Similarity=0.367 Sum_probs=61.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch------hhccccC-CCCCHHH
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK------PWAHEHE-PVNNLLD 405 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~------~~A~~~~-~~~~L~e 405 (516)
||.|+|||+.|.++|..++.. |. ...++++|.+- ++ +..... ++..... ...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999988653 54 24799999851 11 111111 1110000 0124 35
Q ss_pred HhcccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 406 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 406 av~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
+++. +|++|=+...+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 6665 8988855444321 12788889988888878888999974
No 87
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.81 E-value=0.78 Score=43.11 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=55.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ + ......++.++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999998764 420 01368888863 111 0 00012356666665
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
+|++| ++..+ ...+++++.+....+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 67666 33323 356677776665445556666777664
No 88
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.79 E-value=0.084 Score=44.27 Aligned_cols=103 Identities=13% Similarity=0.177 Sum_probs=53.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH-
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 406 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~ea- 406 (516)
++..+|+|+|+|..|..+|+.+.. .| .+++++|++- .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999988865 25 2577888742 111111111001111 11111123332
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 489999665532012223444444445566777677765
No 89
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.73 E-value=0.3 Score=47.36 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 315 LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
-.|++.+++..|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567888888888899999999999998888888887653 4 368888874
No 90
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=91.65 E-value=0.66 Score=46.52 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=67.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc----cCCCCCHHH
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNLLD 405 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~----~~~~~~L~e 405 (516)
...+++|+|+|..|-.+++.+... .+ -++|+++|+. +. ......+... .... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~------~a---~~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FA------LEAILVHDPY------AS---PEILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECTT------CC---HHHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CC------CcEEEEECCc------HH---HHHHHHHHHhcCCeEEEe-CHHH
Confidence 457999999999999988877653 23 3789999986 21 1222222211 1223 8999
Q ss_pred HhcccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHH
Q 010153 406 AVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 459 (516)
Q Consensus 406 av~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectpe~A 459 (516)
+++. +|++|-++... -+|..+++ .+..+|..++. |. +-|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 9997 99999776433 35665443 36789998875 54 589998854
No 91
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.62 E-value=0.21 Score=49.96 Aligned_cols=121 Identities=21% Similarity=0.370 Sum_probs=72.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc----CCchhchhhccccC-CCCCHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHE-PVNNLLDA 406 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~~A~~~~-~~~~L~ea 406 (516)
.||.|+|||..|..+|-+++.. |+ ...++++|.+ .++.+ +|.+.. +|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-----QT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 5899999999999988886542 44 2589999975 22211 011111 1211100 0123 567
Q ss_pred hcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEe
Q 010153 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFA 470 (516)
Q Consensus 407 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifA 470 (516)
+++ +|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||. -.+.+-+++.+ .-.-+|.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~~~~~~k~s~~p~~rviG 146 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV---DIITYMIQKWSGLPVGKVIG 146 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH---HHHHHHHHHHHTCCTTTEEE
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHcCCCHHHEec
Confidence 776 99998555543 21 1268889999889999999999995 44555555543 1124565
Q ss_pred cCC
Q 010153 471 SGS 473 (516)
Q Consensus 471 sGS 473 (516)
+|.
T Consensus 147 ~gt 149 (318)
T 1y6j_A 147 SGT 149 (318)
T ss_dssp CTT
T ss_pred cCC
Confidence 543
No 92
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.50 E-value=0.088 Score=55.62 Aligned_cols=127 Identities=13% Similarity=0.187 Sum_probs=77.8
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc--c-cCC---CCCHH
Q 010153 332 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--E-HEP---VNNLL 404 (516)
Q Consensus 332 ~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~--~-~~~---~~~L~ 404 (516)
.||.|+|||+. +.+++..|+.. ..++. ...++|+|.+-- .++.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 12442 367999998520 0211111111122211 1 111 15788
Q ss_pred HHhcccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 405 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
+++++ +|++|=..+.++. .=+++++.|.+++..-+|+-.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv- 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA- 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH-
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH-
Confidence 99998 9999866665421 1358889999999999999999997
Q ss_pred CCCCCHHHHhcccCCcEEEecC
Q 010153 451 QSECTAEEAYTWSKGRAIFASG 472 (516)
Q Consensus 451 ~~Ectpe~A~~wt~G~aifAsG 472 (516)
-+..+-+++.+.-.-+|.+|
T Consensus 156 --divT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 --GMVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp --HHHHHHHHHHCCCCCEEECC
T ss_pred --HHHHHHHHHhCCCCCEEEeC
Confidence 34555566666433566665
No 93
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.29 E-value=2.3 Score=44.65 Aligned_cols=172 Identities=13% Similarity=0.158 Sum_probs=107.0
Q ss_pred cCCCceeccCCc---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010153 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (516)
Q Consensus 297 r~~~~~FnDDiQ---GTaaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (516)
+..|+|||---- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 357889987533 3455678888888763 25678999999999999999999987543
Q ss_pred hhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHH
Q 010153 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (516)
Q Consensus 356 ~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~ 431 (516)
|+ +++..|+.. + .... -+ ....+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 64 688888741 1 1100 01 123689999987 99988432 123689999999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCC-CC--ceeeCCEEecc-ccccceeecccchHH
Q 010153 432 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFVP-GQVYNHNHFAFAKIP 502 (516)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSP-f~--pv~~~Grt~~p-~Q~NN~yiFPGiglg 502 (516)
.|. +..++.=.|.-..--|-.-.+|++ .|+. .+.|.. |+ |..-+.....| -+..|+.+-|=+|-.
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL~--~g~i-~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~ 301 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVLQ--EGHL-AGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGS 301 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHHH--TTSE-EEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTC
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHHH--cCCc-cEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCC
Confidence 996 678888888755333333345554 4653 333322 21 11100000011 356788888877643
No 94
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.20 E-value=0.2 Score=50.80 Aligned_cols=127 Identities=15% Similarity=0.251 Sum_probs=76.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~ 409 (516)
...||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.....-..+..+++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346899999999999999888764 54 258999998311011000012221 1232111001234567776
Q ss_pred cCCcEEEEccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 010153 410 IKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (516)
Q Consensus 410 vkptvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (516)
+|++|=+.+.+ | +| -+++++.|.+++.+.+|+-.|||. .+..+-+++.+. -+-+|++|
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv---di~t~~~~k~~g~p~~rviG~g 150 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSG 150 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECT
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch---HHHHHHHHHhcCCCHHHeeeec
Confidence 89887444432 2 22 368888999999999999999996 455566655541 13456665
No 95
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.16 E-value=0.25 Score=48.01 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 315 LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
-.|++.+++..|..++..+++|+|||.+|.++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 468888888888899999999999999999888887653 4 478888874
No 96
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.00 E-value=0.058 Score=52.40 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 5899999999999999998763 53 68888874
No 97
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=90.97 E-value=0.15 Score=54.40 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=75.7
Q ss_pred cceEEEeCcchHH--HHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-c--ccCC---CCC
Q 010153 331 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNN 402 (516)
Q Consensus 331 d~riv~~GAGsAg--~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-~--~~~~---~~~ 402 (516)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- ++-+........+. . .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999965 4456666531 122 136899999853 21111111111111 1 1111 257
Q ss_pred HHHHhcccCCcEEEEccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 010153 403 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 442 (516)
Q Consensus 403 L~eav~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~erPII 442 (516)
+.+++++ +|++|=+.+. .|.|. +++++.|.+++..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 9998855532 12332 6899999999999999
Q ss_pred EEcCCCCCCCCCCHHHHhcccCCcEEEecC
Q 010153 443 LALSNPTSQSECTAEEAYTWSKGRAIFASG 472 (516)
Q Consensus 443 FaLSNPt~~~Ectpe~A~~wt~G~aifAsG 472 (516)
+-.|||. -+..+-+.++.. .-+|.+|
T Consensus 149 i~~TNPv---di~t~~~~k~p~-~rviG~c 174 (480)
T 1obb_A 149 LQAANPI---FEGTTLVTRTVP-IKAVGFC 174 (480)
T ss_dssp EECSSCH---HHHHHHHHHHSC-SEEEEEC
T ss_pred EEeCCcH---HHHHHHHHHCCC-CcEEecC
Confidence 9999997 345555555544 4566654
No 98
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.88 E-value=0.37 Score=49.08 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
++.+++.... +....++.|+|+|..|..+++.+... .++ ++++++|+. .++ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555543 34568999999999999988776543 232 678888873 222 2222333321
Q ss_pred c----cCCCCCHHHHhcccCCcEEEEccCCC---CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHH
Q 010153 396 E----HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEE 458 (516)
Q Consensus 396 ~----~~~~~~L~eav~~vkptvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectpe~ 458 (516)
. .....++.|+++. +|++|=++..+ -+|+.+++ .+.-.|+.++. |. +-|+.++-
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHHH
Confidence 0 1124689999986 99999776643 23454333 24458888875 65 67887653
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.83 E-value=0.24 Score=46.98 Aligned_cols=99 Identities=15% Similarity=0.270 Sum_probs=61.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ea 406 (516)
.++...||.|+|+|..|..+|..+... |. +.++++|++ . +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT----E---ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS----H---HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC----H---HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 247778763 1 1111111111 00112467777
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
++. +|++|=+.. .... +++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~av~-~~~~-~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIVSLK-DSAF-AELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEECCC-HHHH-HHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEEecC-HHHH-HHHHHHHHhhcCCCcEEEECCCCC
Confidence 764 898884433 3233 88888887543 567888888754
No 100
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.82 E-value=0.21 Score=43.01 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 599999999999999998763 75 47778763
No 101
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.74 E-value=1.7 Score=44.36 Aligned_cols=171 Identities=16% Similarity=0.078 Sum_probs=103.3
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDI---QGTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Al~~~---------------------g~~L~d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
..|++.|--- +.+|=-+++-+|+..|.. |..|.+.++.|+|.|..|..+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 4566666542 235556788888877642 567899999999999999999999853
Q ss_pred HHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHH
Q 010153 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (516)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~ev 429 (516)
.|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- ..++|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 254 6888887421 110 01111112589999986 899884432 236899999
Q ss_pred HHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCC-CCceeeCCEEeccccccceeecccchHH
Q 010153 430 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FDPFEYNGKVFVPGQVYNHNHFAFAKIP 502 (516)
Q Consensus 430 v~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSP-f~pv~~~Grt~~p~Q~NN~yiFPGiglg 502 (516)
++.|. +..|+.=.|.-..--|-.-.+|++ .|+.-.| |-. |++ +- .....--+..|+.+-|=+|-.
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~gA-~LDVf~~-EP-~~~~pL~~~~nvilTPHia~~ 315 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEALR--SKHLFAA-GLDVFAN-EP-AIDPRYRSLDNIFLTPHIGSA 315 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE-EESCCTT-TT-SCCTTGGGCTTEEECCSCTTC
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCceEE-EecCCCC-CC-CCCchHHhCCCEEEcCccCcC
Confidence 99996 677888777643223333334443 4554322 211 100 00 001111345688888877643
No 102
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=90.71 E-value=0.11 Score=55.29 Aligned_cols=126 Identities=17% Similarity=0.253 Sum_probs=78.2
Q ss_pred cceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-c--ccCC---CCCH
Q 010153 331 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNNL 403 (516)
Q Consensus 331 d~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-~--~~~~---~~~L 403 (516)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+......+. . .... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665441 01442 35799999852 22111111112221 1 1111 1589
Q ss_pred HHHhcccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 404 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
.+++++ +|++|=+.+.++. .=+++++.|.++++.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999997 9999866654321 2358889999999999999999997
Q ss_pred CCCCCCHHHHhcccCCcEEEecC
Q 010153 450 SQSECTAEEAYTWSKGRAIFASG 472 (516)
Q Consensus 450 ~~~Ectpe~A~~wt~G~aifAsG 472 (516)
-+..+-+++.+.-.-+|.+|
T Consensus 175 ---di~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 ---AIVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp ---HHHHHHHHHHSTTCCEEECC
T ss_pred ---HHHHHHHHHhCCCCCEEEeC
Confidence 35555566655443566665
No 103
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=90.53 E-value=1.3 Score=44.72 Aligned_cols=119 Identities=16% Similarity=0.229 Sum_probs=77.8
Q ss_pred CCceeccCCc---chHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 299 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
.|.+.|---- .+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 110 gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~---- 185 (333)
T 3ba1_A 110 GVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA---- 185 (333)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT----
T ss_pred CcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH----
Confidence 4455554322 3344467777776553 2467899999999999999999998754
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (516)
.|+ +++.+|+.. .. .. .+ ....+|.|+++. .|+++=.-- ..++++++.++.
T Consensus 186 -~G~-------~V~~~dr~~----~~---~~----g~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~ 240 (333)
T 3ba1_A 186 -FDC-------PISYFSRSK----KP---NT----NY----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDA 240 (333)
T ss_dssp -TTC-------CEEEECSSC----CT---TC----CS----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHH
T ss_pred -CCC-------EEEEECCCc----hh---cc----Cc----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhc
Confidence 253 578888642 11 11 01 112478998886 898874421 236888999999
Q ss_pred HHcCCCCcEEEEcCCCC
Q 010153 433 MASFNEKPLILALSNPT 449 (516)
Q Consensus 433 Ma~~~erPIIFaLSNPt 449 (516)
|. +..+|.-.|.-.
T Consensus 241 mk---~gailIn~srG~ 254 (333)
T 3ba1_A 241 LG---PKGVLINIGRGP 254 (333)
T ss_dssp HC---TTCEEEECSCGG
T ss_pred CC---CCCEEEECCCCc
Confidence 96 567887777643
No 104
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.51 E-value=0.55 Score=47.80 Aligned_cols=102 Identities=20% Similarity=0.308 Sum_probs=62.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCC-------ccCCchhchhhccc---
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR-------KDSLQHFKKPWAHE--- 396 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R-------~~~l~~~k~~~A~~--- 396 (516)
++|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=+=.++- .+++-..|..-+.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 182 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELL 182 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHH
Confidence 467899999999999999999999876 65 7899999853211110 00111112111110
Q ss_pred --cC---------CCC--C-HHHHhcccCCcEEEEccCCCCCC-CHHHHHHHHcCCCCcEEEE
Q 010153 397 --HE---------PVN--N-LLDAVKVIKPTILIGSSGVGRTF-TKEVIEAMASFNEKPLILA 444 (516)
Q Consensus 397 --~~---------~~~--~-L~eav~~vkptvLIG~S~~~g~F-t~evv~~Ma~~~erPIIFa 444 (516)
.+ .+. + +.+ ++ +.|++|-++. ..- +...|...+.....|.|.+
T Consensus 183 ~~np~v~v~~~~~~i~~~~~~~~-~~--~~DlVvd~~D--n~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 183 KRNSEISVSEIALNINDYTDLHK-VP--EADIWVVSAD--HPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp HHCTTSEEEEEECCCCSGGGGGG-SC--CCSEEEECCC--CSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHCCCCeEEEeecccCchhhhhH-hc--cCCEEEEecC--ChHHHHHHHHHHHHHhCCCEEEE
Confidence 01 111 1 444 55 4888887653 223 6777777777778999875
No 105
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.50 E-value=0.2 Score=49.84 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=65.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc----CCchhchhhccccCC---CCCHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEP---VNNLL 404 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~~A~~~~~---~~~L~ 404 (516)
.||.|+|||..|.++|..++. .|+ . +++++|.+- ++-+ ++.+...+... ... ..++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~----~~~~g~~~dl~~~~~~~~~-~~~i~~t~d~- 65 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVE----GVPQGKALDLYEASPIEGF-DVRVTGTNNY- 65 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSS----SHHHHHHHHHHTTHHHHTC-CCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCc----cHHHHHHHhHHHhHhhcCC-CeEEEECCCH-
Confidence 489999999999999998754 253 1 399999751 1100 11111100111 111 1456
Q ss_pred HHhcccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 405 DAVKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
+++++ +|++|=+.+.+ | ..-+++.+.+.+++++-+|+--|||. -...+-+.+
T Consensus 66 ~a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv---~~~t~~~~~ 131 (309)
T 1ur5_A 66 ADTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL---DAMTYLAAE 131 (309)
T ss_dssp GGGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH---HHHHHHHHH
T ss_pred HHHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch---HHHHHHHHH
Confidence 77887 99998555443 2 12247788888888888888789997 233444444
No 106
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.50 E-value=0.18 Score=49.16 Aligned_cols=105 Identities=14% Similarity=0.271 Sum_probs=61.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc-hhchhhccccC-CC-CCHHHHh
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEHE-PV-NNLLDAV 407 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~~A~~~~-~~-~~L~eav 407 (516)
..||.|+|||+.|..+|..|... |. ..+++++|++---..+ ..++ .+..++..+.. .. .+ .+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDD-PEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESC-GGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCC-HHHh
Confidence 35899999999999999887653 53 1479999985310000 0010 01111111100 00 13 3456
Q ss_pred cccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
+. +|++|=+.+.+.. +-+++++.|++++++.+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 64 8988855443311 11178888888778889999999973
No 107
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=90.40 E-value=0.28 Score=51.31 Aligned_cols=124 Identities=12% Similarity=0.162 Sum_probs=77.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHh-hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccC---CCCCHHHHh
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---PVNNLLDAV 407 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~-~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~---~~~~L~eav 407 (516)
.||.|+|||+. .+..++..+.+ ..++. ...++|+|.+- +|.+.........++... ...++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 55555444443 23442 36899999742 221100111111111111 125788999
Q ss_pred cccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 010153 408 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 453 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~~E 453 (516)
++ +|++|=..++++ ++ =.++++.|.+++ .-+|+-.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999997776653 22 358899999999 99999999997 3
Q ss_pred CCHHHHhcccCCcEEEecC
Q 010153 454 CTAEEAYTWSKGRAIFASG 472 (516)
Q Consensus 454 ctpe~A~~wt~G~aifAsG 472 (516)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 4455566666433566665
No 108
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=90.27 E-value=1.6 Score=43.40 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=78.7
Q ss_pred CCceeccCC---cchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010153 299 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (516)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (516)
.++|.|--- +.+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 89 gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 164 (307)
T 1wwk_A 89 GIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL---- 164 (307)
T ss_dssp TCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT----
T ss_pred CcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC----
Confidence 455555322 23444467888877663 34679999999999999999999988642
Q ss_pred cCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHH
Q 010153 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (516)
Q Consensus 358 ~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (516)
|+ +++.+|+.. .. . .+.. .-...+|.|+++. .|+++=.-- ..++++++.++.
T Consensus 165 -G~-------~V~~~d~~~----~~----~-----~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 221 (307)
T 1wwk_A 165 -GM-------NILLYDPYP----NE----E-----RAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKL 221 (307)
T ss_dssp -TC-------EEEEECSSC----CH----H-----HHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHH
T ss_pred -CC-------EEEEECCCC----Ch----h-----hHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhc
Confidence 53 688888631 10 0 1111 1112379999986 898885421 246889999999
Q ss_pred HHcCCCCcEEEEcCC
Q 010153 433 MASFNEKPLILALSN 447 (516)
Q Consensus 433 Ma~~~erPIIFaLSN 447 (516)
|. +..++.=.|.
T Consensus 222 mk---~ga~lin~ar 233 (307)
T 1wwk_A 222 MK---KTAILINTSR 233 (307)
T ss_dssp SC---TTCEEEECSC
T ss_pred CC---CCeEEEECCC
Confidence 86 5678887776
No 109
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.21 E-value=1.3 Score=42.82 Aligned_cols=81 Identities=21% Similarity=0.208 Sum_probs=55.4
Q ss_pred eeeCCCchHHHHHHHHcC------CCceeccCCcchHHHHHHHHHHHHHHh-CCCcccceEEEeC-cchHHHHHHHHHHH
Q 010153 281 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 352 (516)
Q Consensus 281 ~EDf~~~~af~iL~ryr~------~~~~FnDDiQGTaaV~LAgll~Al~~~-g~~L~d~riv~~G-AGsAg~GIA~ll~~ 352 (516)
++-..-..+.+++++-+. +..+| .|..|.- .--.|++.+++.. +.++++.+++|.| +|.+|.++|..+.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 444444567777776652 23344 3445532 3356777788777 7889999999999 89999999988865
Q ss_pred HHHhhcCCChhcccCeEEEEcCC
Q 010153 353 EISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 353 ~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
. |. +++++|++
T Consensus 142 ~-----G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 E-----GA-------EVVLCGRK 152 (287)
T ss_dssp T-----TC-------EEEEEESS
T ss_pred C-----cC-------EEEEEECC
Confidence 3 52 48888874
No 110
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.21 E-value=0.39 Score=48.12 Aligned_cols=104 Identities=20% Similarity=0.272 Sum_probs=65.1
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhh-ccccCCCCCHHHHhcc
Q 010153 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-AHEHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~-A~~~~~~~~L~eav~~ 409 (516)
.||+|.| +|..|..++..|.+ .|+ ...++++|.+-- .+...+|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888653 353 256999996421 00000011100000 0000011257888987
Q ss_pred cCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 410 IKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 410 vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
+|++|=+.+.+ | ..+++++++|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 89998555443 2 24678888888888888999999997
No 111
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=90.18 E-value=2.2 Score=42.49 Aligned_cols=117 Identities=18% Similarity=0.171 Sum_probs=80.3
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~~---------------------g~~L~d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
..+.+.|----. +|=-+++.+|+..|.. |..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 456666643322 3444678888776532 457899999999999999999998864
Q ss_pred HHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHH
Q 010153 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 429 (516)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~ev 429 (516)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 253 688888641 11 11 1 13579999987 89988652 2246888888
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 010153 430 IEAMASFNEKPLILALSNP 448 (516)
Q Consensus 430 v~~Ma~~~erPIIFaLSNP 448 (516)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88775 67788888874
No 112
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=90.16 E-value=0.14 Score=51.14 Aligned_cols=121 Identities=20% Similarity=0.321 Sum_probs=72.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc----CCchhchhhccccCC-CCCHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEP-VNNLLDA 406 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~~A~~~~~-~~~L~ea 406 (516)
.||.|+|||+.|..+|-+|+.. ++ ...++|+|.+- ++.+ +|.+. .+|.++..- ..+ .++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~----~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a 64 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDR----KLAQAHAEDILHA-TPFAHPVWVWAGS-YGD 64 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSH----HHHHHHHHHHHTT-GGGSCCCEEEECC-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHHHHHh-HhhcCCeEEEECC-HHH
Confidence 3899999999999988876542 43 25899999852 1110 12111 122211000 123 667
Q ss_pred hcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEe
Q 010153 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFA 470 (516)
Q Consensus 407 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifA 470 (516)
+++ +|++|=+.+.+ |. .-+++++.|.+++.+-+|+-.|||. -.+.+-+++.+. -.-+|.
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG 139 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV---DVMTQVAYALSGLPPGRVVG 139 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHTCCGGGEEE
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHHcCCCHHHEEe
Confidence 876 89998544433 32 2356777788889999999999996 444555555431 123556
Q ss_pred cCC
Q 010153 471 SGS 473 (516)
Q Consensus 471 sGS 473 (516)
+|.
T Consensus 140 ~gt 142 (310)
T 2xxj_A 140 SGT 142 (310)
T ss_dssp CTT
T ss_pred cCc
Confidence 543
No 113
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.99 E-value=0.34 Score=47.83 Aligned_cols=98 Identities=22% Similarity=0.340 Sum_probs=57.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch-hhcc----ccCCCCCHHH
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH----EHEPVNNLLD 405 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~~A~----~~~~~~~L~e 405 (516)
+.||.|+|+|+.|..+|..|.++ | .+++++|+.. .+.+.+..... .|-. ......++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----EIVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----HHHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----HHHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 57999999999999999998764 4 3688888741 11000110000 0000 0011145666
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 010153 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 451 (516)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (516)
++. +|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 654 78766 33333 567788877665 55678889997653
No 114
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.98 E-value=0.3 Score=49.84 Aligned_cols=96 Identities=18% Similarity=0.303 Sum_probs=62.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc----cCCCCCH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~----~~~~~~L 403 (516)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+. ..+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~----~~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDIN----IDK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC----HHH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999988754 252 68888874 111 11111111110 0012357
Q ss_pred HHHhcccCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 404 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
.+.++. .|++|.+...+ .+++++.++.|. +.-+|.-+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 788875 99999876544 457899999886 4556666663
No 115
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.95 E-value=2 Score=43.94 Aligned_cols=175 Identities=14% Similarity=0.069 Sum_probs=103.8
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (516)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 354 (516)
..|.+.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 45666654322 3344567778877753 2567999999999999999999998854
Q ss_pred HhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHH
Q 010153 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (516)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv 430 (516)
.|+ +++.+|+... . ....+.. ......+|.|+++. .|+++=.- ...++|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~----~---~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM----A---PELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC----C---HHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc----C---HHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 264 5777776421 0 1111100 01123589999987 89988432 23368999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceee-CCEEeccccccceeecccchHHH
Q 010153 431 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQVYNHNHFAFAKIPI 503 (516)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~-~Grt~~p~Q~NN~yiFPGiglg~ 503 (516)
+.|. +..+|.=.|+-...-|-.-.+|++ .|+.--|.--=|++--. .. ..--+..|+.+-|=+|-..
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~--~pL~~~~nvilTPHia~~t 310 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKD--HPWRYMPNQAMTPHTSGTT 310 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTT--CGGGTSTTBCCCCSCGGGS
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCC--ChhhcCCCEEECCcCCCCC
Confidence 9996 678888888744223333345553 46544332221211100 00 0012456888888776544
No 116
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.89 E-value=0.26 Score=49.81 Aligned_cols=126 Identities=15% Similarity=0.272 Sum_probs=74.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC---CCHHH
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 405 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~---~~L~e 405 (516)
++..||.|+|||..|.++|.+|+.. |+ + .+.++|.+-=..++-..+|.+. ..|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~-----~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK-----EL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 4567999999999999999888653 65 2 6999998421110000012211 1122111111 344 7
Q ss_pred HhcccCCcEEEEccCC---CCC-----C------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 010153 406 AVKVIKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG--RAIF 469 (516)
Q Consensus 406 av~~vkptvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G--~aif 469 (516)
++++ +|++|=+.+. +|. | -+++++.|.+++..-+|+-.|||. .+...-+++.++= +-+|
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv---d~~t~~~~k~sg~p~~rvi 146 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL---DAMVWALQKFSGLPAHKVV 146 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc---HHHHHHHHHhcCCCHHHEE
Confidence 8887 8988754432 332 1 256778888889999999999996 4444455554421 3466
Q ss_pred ecC
Q 010153 470 ASG 472 (516)
Q Consensus 470 AsG 472 (516)
++|
T Consensus 147 G~~ 149 (324)
T 3gvi_A 147 GMA 149 (324)
T ss_dssp ECC
T ss_pred eec
Confidence 666
No 117
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.89 E-value=0.28 Score=47.88 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
...|++.+++..+.++++.+++|.|||.+|.++|..+.+ . - +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~-------G-~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----D-------N-NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----S-------S-EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----C-------C-CEEEEECC
Confidence 678999999988889999999999999777777766543 1 2 68888874
No 118
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.84 E-value=2.5 Score=42.41 Aligned_cols=119 Identities=11% Similarity=0.126 Sum_probs=81.6
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (516)
..|++.|---.. +|=-+++.+|+..|. .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGM-- 168 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 467777753333 344478888887761 23468899999999999999999988642
Q ss_pred hhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHH
Q 010153 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (516)
Q Consensus 356 ~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~ 431 (516)
|+ +++.+|+.. .. . + + .++. ..+|.|+++. .|+++=.- ...++++++.++
T Consensus 169 ---G~-------~V~~~d~~~----~~-~-~---~-~~~~----~~~l~ell~~--aDvV~~~~p~t~~t~~li~~~~l~ 222 (331)
T 1xdw_A 169 ---GA-------TVIGEDVFE----IK-G-I---E-DYCT----QVSLDEVLEK--SDIITIHAPYIKENGAVVTRDFLK 222 (331)
T ss_dssp ---TC-------EEEEECSSC----CC-S-C---T-TTCE----ECCHHHHHHH--CSEEEECCCCCTTTCCSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----cH-H-H---H-hccc----cCCHHHHHhh--CCEEEEecCCchHHHHHhCHHHHh
Confidence 54 588888742 11 1 1 1 1111 2379999986 89988641 234689999999
Q ss_pred HHHcCCCCcEEEEcCC
Q 010153 432 AMASFNEKPLILALSN 447 (516)
Q Consensus 432 ~Ma~~~erPIIFaLSN 447 (516)
.|. +..++.=.|.
T Consensus 223 ~mk---~ga~lin~sr 235 (331)
T 1xdw_A 223 KMK---DGAILVNCAR 235 (331)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 986 5678888885
No 119
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.82 E-value=0.32 Score=48.16 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=60.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCC----chhchhhcccc--CCCCCHHHH
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 406 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l----~~~k~~~A~~~--~~~~~L~ea 406 (516)
||.|+|||..|.++|..+... ++ -.+++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999987652 22 25799999852 211111 11000010110 01145655
Q ss_pred hcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 407 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
++. +|++|=+.+.+ |- .-+++.+.|+++++..+|+-.|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 765 89888554332 22 1157778888888888888899996
No 120
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.74 E-value=0.22 Score=50.23 Aligned_cols=124 Identities=19% Similarity=0.267 Sum_probs=73.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHhccc
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~~L~eav~~v 410 (516)
||.|+|||..|.++|..++.. |+ .+.+.++|.+-=..++-..+|.+. ..+......+ .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 54 258999998531111100012211 1111111111 245677887
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 010153 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (516)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (516)
+|++|=+.+.+ |- +-+++++.+.+++++.+|+-.|||. .....-+++.++ -+-+|++|
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL---DVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH---HHHHHHHHHHHTCCGGGEEECC
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch---hHHHHHHHHhcCCChHHEEeec
Confidence 99887444333 31 2356778888999999999999996 455555555431 13355555
No 121
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.74 E-value=0.37 Score=48.31 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=34.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
++|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 579999999999999999999999886 65 7899999863
No 122
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=89.58 E-value=2.4 Score=42.57 Aligned_cols=91 Identities=15% Similarity=0.163 Sum_probs=61.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ea 406 (516)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ...+..-+. ..+|.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV----NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH----HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch----hhhhhcCce----ecCHHHH
Confidence 67999999999999999999998753 253 688888741 11 111100011 1378898
Q ss_pred hcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 407 VKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 407 v~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
++. +|+++=.-. ..++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 898874322 23578888888885 45 7776664
No 123
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.56 E-value=4 Score=42.37 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=81.9
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
..|+|+|---- .+|=-++|.+|+..|. .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 57888886543 3455578888888764 25679999999999999999999988542
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (516)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 64 5888887421 1010 01 123478888886 88887432 2235888888888
Q ss_pred HHcCCCCcEEEEcCC
Q 010153 433 MASFNEKPLILALSN 447 (516)
Q Consensus 433 Ma~~~erPIIFaLSN 447 (516)
|. +.-++.=.|.
T Consensus 223 mk---~ga~lIN~aR 234 (404)
T 1sc6_A 223 MK---PGSLLINASR 234 (404)
T ss_dssp SC---TTEEEEECSC
T ss_pred cC---CCeEEEECCC
Confidence 86 5667777775
No 124
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.50 E-value=3.5 Score=40.96 Aligned_cols=117 Identities=19% Similarity=0.214 Sum_probs=78.8
Q ss_pred CCCceeccC-Ccc--hHHHHHHHHHHHHHHh-----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010153 298 TTHLVFNDD-IQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (516)
Q Consensus 298 ~~~~~FnDD-iQG--TaaV~LAgll~Al~~~-----------------g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (516)
..+++.|-- ... +|=-+++.+|+..|.. +..|.+.++.|+|.|..|..+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 467777743 322 3334788888876632 236889999999999999999998864
Q ss_pred cCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHH
Q 010153 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (516)
Q Consensus 358 ~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (516)
.|+ +++.+|+..- + . . .....+|.|+++. .|+++=.- ...++++++.++.|
T Consensus 146 ~G~-------~V~~~dr~~~------~---~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 146 LGA-------QVRGFSRTPK------E---G---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp TTC-------EEEEECSSCC------C---S---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCC-------EEEEECCCcc------c---c---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 254 5888886432 0 0 0 1123478888886 89887542 23457888888888
Q ss_pred HcCCCCcEEEEcCC
Q 010153 434 ASFNEKPLILALSN 447 (516)
Q Consensus 434 a~~~erPIIFaLSN 447 (516)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 5678887776
No 125
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.32 E-value=0.98 Score=44.68 Aligned_cols=100 Identities=19% Similarity=0.199 Sum_probs=60.0
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
.|++.+++..| +.|++|+|||.||.+|+..|.+. | .+|+++++. .++.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 88999999999999999888653 4 478888874 33322122 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC----CCCCHHHHH-HHHcCCCCcEEEEcC-CC
Q 010153 396 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS-NP 448 (516)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS-NP 448 (516)
......++. ++|++|-++..+ -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 111122221 599999776654 157888665 454 466887664 44
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.29 E-value=0.42 Score=44.58 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=57.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEE-EcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l-vDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
.||.|+|+|..|..+|..+... |. ++.+ +|++ . +.+....+.+-. ....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~----~---~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG----P---ASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC----G---GGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC----H---HHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988653 53 3444 5542 1 112222222210 111345566765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
+|++| ++..+ ...+++++.++. .+..+|+.++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88887 33333 466777777765 45669999999873
No 127
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.23 E-value=0.57 Score=46.11 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=59.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC--------cccCCCccCCchhchhhccccCCCCCH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 403 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G--------Li~~~R~~~l~~~k~~~A~~~~~~~~L 403 (516)
.||.|+|+|+-|..+|..|.++ | .++.++|+.- +...++ ....++ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 5899999999999999988653 4 4688888753 111110 000000 0 000111456
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 010153 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (516)
.++.+ .+|++| ++... ..++++++.++.. .+..+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 66553 388887 55544 3466899998764 34567888999764
No 128
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.19 E-value=0.25 Score=49.75 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=75.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHh
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 407 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~~L~eav 407 (516)
+..||.|+|||..|.++|..|+. .|+ + .+.++|.+-=...+-..+|.+. ..+......+ .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 355 2 6999998521100000012111 1111111111 1225778
Q ss_pred cccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEEec
Q 010153 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG--RAIFAS 471 (516)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G--~aifAs 471 (516)
++ +|++|=+.+.+ |. .-+++++.+.++++.-+|+-.|||. -...+-+++.++= +-+|++
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~sg~p~~rviG~ 146 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL---DIMVNMLQKFSGVPDNKIVGM 146 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEEEE
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHhcCCCHHHEEee
Confidence 87 89888554433 31 1256778888899888999999996 4455555555421 346776
Q ss_pred C
Q 010153 472 G 472 (516)
Q Consensus 472 G 472 (516)
|
T Consensus 147 ~ 147 (321)
T 3p7m_A 147 A 147 (321)
T ss_dssp C
T ss_pred c
Confidence 6
No 129
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.05 E-value=2.4 Score=43.13 Aligned_cols=167 Identities=14% Similarity=0.122 Sum_probs=90.7
Q ss_pred CCceeccCCc---chHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010153 299 THLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (516)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (516)
.|+|.|---- .+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 116 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~--- 192 (340)
T 4dgs_A 116 NIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA--- 192 (340)
T ss_dssp TCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT---
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH---
Confidence 4555553221 2455567777777653 2467899999999999999999999853
Q ss_pred hhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010153 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (516)
Q Consensus 356 ~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~ 431 (516)
.|+ +++..|+.. ... . .+ ....+|.|+++. .|+++=.-- ..++++++.++
T Consensus 193 --~G~-------~V~~~dr~~----~~~--~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~ 246 (340)
T 4dgs_A 193 --FGM-------SVRYWNRST----LSG--V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQ 246 (340)
T ss_dssp --TTC-------EEEEECSSC----CTT--S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHH
T ss_pred --CCC-------EEEEEcCCc----ccc--c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHh
Confidence 254 578888631 110 0 01 113589999987 999884321 24688899999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCC--CceeeCCEEeccccccceeecccchHHH
Q 010153 432 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQVYNHNHFAFAKIPI 503 (516)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf--~pv~~~Grt~~p~Q~NN~yiFPGiglg~ 503 (516)
.|. +..++.=.|.-..--|-.-.+|++ .|+.-.|.=-=| +|.. + ..--+..|+.+-|=+|-..
T Consensus 247 ~mk---~gailIN~aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~---~~L~~~~nvilTPHia~~t 311 (340)
T 4dgs_A 247 ALG---PEGIVVNVARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-R---SEFHTTPNTVLMPHQGSAT 311 (340)
T ss_dssp HTT---TTCEEEECSCC----------------CCSSEEEESCCSSSSSC-C---SHHHHSSSEEECSSCSSCC
T ss_pred cCC---CCCEEEECCCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-c---cchhhCCCEEEcCcCCcCC
Confidence 997 567888888754334444445553 344322211111 1110 0 0113456888888776543
No 130
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.03 E-value=0.13 Score=52.42 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=76.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHh
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAV 407 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~--~~~~~L~eav 407 (516)
...||.|+|||..|.++|..++.. |+ ...+.++|.+-=..++-..+|.+. ..|.... ....++.+ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988764 55 257999997311000000012211 1232211 01134544 6
Q ss_pred cccCCcEEEEc---cCCCC-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC---cEEEe
Q 010153 408 KVIKPTILIGS---SGVGR-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG---RAIFA 470 (516)
Q Consensus 408 ~~vkptvLIG~---S~~~g-----~------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G---~aifA 470 (516)
++ +|++|=+ ...+| + .-+++++.+.++++..+|+-.|||. .+...-+++.+ | +-+|.
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~s-g~p~~rViG 161 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLS-GLPMHRIIG 161 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH-CCCGGGEEC
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHh-CCCHHHeec
Confidence 65 9998833 33333 1 2356778888899999999999995 56666666655 3 34666
Q ss_pred cC
Q 010153 471 SG 472 (516)
Q Consensus 471 sG 472 (516)
+|
T Consensus 162 ~g 163 (330)
T 3ldh_A 162 SG 163 (330)
T ss_dssp CT
T ss_pred cc
Confidence 65
No 131
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.93 E-value=1.1 Score=44.29 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=69.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
++.+++.... +....+|.|+|+|..|..+++.+... .|. ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3444553332 45667999999999999999888653 243 578888862 111 1112111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCC-CCCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHHHHhcccCCcEEE
Q 010153 396 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAEEAYTWSKGRAIF 469 (516)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~~Ectpe~A~~wt~G~aif 469 (516)
......++.|+++. +|++|=+... ..+|.++ . ..+..+|+.+| +|. .-|+.+ ++.+ .|..++
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~---~---l~~g~~vi~~g~~~p~-~~el~~-~~~~--~g~~~v 247 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE---W---VKPGAHINAVGASRPD-WRELDD-ELMK--EAVLYV 247 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG---G---SCTTCEEEECCCCSTT-CCSBCH-HHHH--HSEEEE
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH---H---cCCCcEEEeCCCCCCC-ceeccH-HHHh--cCEEEE
Confidence 01124689999986 8998855432 2234332 1 23566888885 354 366654 3433 354443
No 132
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.88 E-value=0.27 Score=50.47 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCE
Confidence 67899999999999999999999875 75 7999999863
No 133
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=88.84 E-value=1.8 Score=44.29 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=88.2
Q ss_pred eEeeeCCCchH-HHHHHHHcCCCceeccCC---cchHHHHHHHHHHHHHH--------------------hCCCcccceE
Q 010153 279 IQFEDFANHNA-FELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRF 334 (516)
Q Consensus 279 Iq~EDf~~~~a-f~iL~ryr~~~~~FnDDi---QGTaaV~LAgll~Al~~--------------------~g~~L~d~ri 334 (516)
|+.-..+..|- .+...+.+..|.|.|--- +.+|=-+++.+|+..|. .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 55554444442 122222222566666432 23444468888887762 3678999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcE
Q 010153 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 414 (516)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptv 414 (516)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... . ....+ .+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL----P---KDAEE-KV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC----C---HHHHH-HT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc----c---hhHHH-hc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998753 253 33787876311 0 11111 11 00112478998886 899
Q ss_pred EEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 415 LIGSSGV----GRTFTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 415 LIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
++=.--. .++++++.++.|. +..+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 8854322 2688898888886 57788888874
No 134
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=88.83 E-value=1.4 Score=43.92 Aligned_cols=112 Identities=20% Similarity=0.176 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~ 395 (516)
++.+++..... ....++.|+|+|..|-.+++.+... .+ .++++++|+. .++ .....+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FD------IGEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CC------ccEEEEECCC----HHH---HHHHHHHHHh
Confidence 34455554432 3567999999999999988877653 23 2678888873 222 2222233321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHH
Q 010153 396 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 457 (516)
Q Consensus 396 ---~~~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~~Ectpe 457 (516)
+.. ..++.|++ . .|++|=++..+ -.++.+++ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899998 5 99998766543 23443322 2566899883 455 6788764
No 135
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.83 E-value=0.31 Score=49.00 Aligned_cols=127 Identities=14% Similarity=0.243 Sum_probs=76.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC--cccCCCccCCchhchhhccccCCC--CCHH
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 404 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G--Li~~~R~~~l~~~k~~~A~~~~~~--~~L~ 404 (516)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- -..++...++.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 4567999999999999999988753 54 3789999851 1111111112211 2332211111 1224
Q ss_pred HHhcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEE
Q 010153 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAI 468 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~ai 468 (516)
+++++ .|++|=+.+.+ |- .-+++++.++++++.-+|+-.|||. .....-+++.++ -+-+
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv---d~~t~~~~k~sg~p~~rv 148 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV---DAMTYSVFKEAGFPKERV 148 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGE
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH---HHHHHHHHHhcCCChHHE
Confidence 66776 99887554433 31 2357888888899999999999996 555555555431 1334
Q ss_pred EecC
Q 010153 469 FASG 472 (516)
Q Consensus 469 fAsG 472 (516)
|++|
T Consensus 149 iG~g 152 (315)
T 3tl2_A 149 IGQS 152 (315)
T ss_dssp EECC
T ss_pred Eeec
Confidence 5554
No 136
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.68 E-value=1 Score=41.76 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=26.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+...||.|+|+|..|..+|..+... | .+++++|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 346678999999999999999988653 4 368888763
No 137
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.63 E-value=0.27 Score=49.82 Aligned_cols=127 Identities=16% Similarity=0.222 Sum_probs=76.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCC-CCCHHHHhcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKV 409 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~-~~~L~eav~~ 409 (516)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+-=...+-.-+|++. .+|....-. ..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988763 54 258999997310000000012222 233211000 1123466776
Q ss_pred cCCcEEEEccCC---CCC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 010153 410 IKPTILIGSSGV---GRT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (516)
Q Consensus 410 vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (516)
+|++|=+.+. +|- .-+++++.+.+++.+.+|+-.|||. .+..+-+++.+. -+-+|++|.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---d~~t~~~~k~~g~p~~rviG~gt 148 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---DILTYATWKFSGLPKERVIGSGT 148 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---HHHHHHHHHhcCCCHHHEEeecc
Confidence 8988744433 331 1267778888999999999999996 455666665532 134566653
No 138
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.45 E-value=0.97 Score=44.49 Aligned_cols=111 Identities=12% Similarity=0.156 Sum_probs=64.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCC-CccCCchhc--hhhccc---cCC---CC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE---HEP---VN 401 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~-R~~~l~~~k--~~~A~~---~~~---~~ 401 (516)
..||.|+|+|..|.++|..+.+..... . ....+++++|+..-.... +.+.+.... ..|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 368999999999999999998752110 0 001468888875321100 000011000 001000 001 14
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (516)
++.++++. +|++| ++... ...+++++.+.... +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888875 89877 44433 57789999887653 4678889999654
No 139
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.41 E-value=0.3 Score=48.74 Aligned_cols=105 Identities=18% Similarity=0.370 Sum_probs=66.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc------ccCCC---CCH
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPV---NNL 403 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~------~~~~~---~~L 403 (516)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++ +......+.+ ....+ .+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~~i~~t~d~ 62 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK---PQGEALDLAHAAAELGVDIRISGSNSY 62 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH---HHHHHHHHHHHHHHHTCCCCEEEESCG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh---HHHHHHHHHHhhhhcCCCeEEEECCCH
Confidence 689999999999999777643 44 379999985 222 1111111111 01111 355
Q ss_pred HHHhcccCCcEEEEccCCCC---C-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 404 LDAVKVIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g---~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
+++++ +|++|=+.+.+. - .-+++++.|.++++.-+|+-.|||. -...+-+++
T Consensus 63 -~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k 128 (308)
T 2d4a_B 63 -EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV---DAMTYVMYK 128 (308)
T ss_dssp -GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHH
T ss_pred -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHHH
Confidence 67877 999986655442 1 2457888888888888777789997 344444544
No 140
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.39 E-value=1.2 Score=43.11 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=58.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC--CCcccCCCccCCchhchhhc--------cccCCCC-
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWA--------HEHEPVN- 401 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~~A--------~~~~~~~- 401 (516)
||.|+|+|..|..+|..|.+. | .+++++|+ +.-- ++..++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI-------LKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH-------HHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH-------HHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999998764 4 36888887 3210 111100000 0000113
Q ss_pred -CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 402 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 402 -~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
++.|+++. +|++|= +... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67788875 888773 3333 36788888886633466888898865
No 141
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=88.34 E-value=1.9 Score=46.35 Aligned_cols=99 Identities=15% Similarity=0.252 Sum_probs=57.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc-hhchhhcc-c--cCCCCC-HH
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-E--HEPVNN-LL 404 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~~A~-~--~~~~~~-L~ 404 (516)
-+.||||+|||+.|-++|.+|++. .++. ..+|.+.|+.- .+.+ +. ....++.. . ...... |.
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~~-~~~~~g~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKVD-VAQQYGVSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSCC-HHHHHTCEEEECCCCTTTHHHHTG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhhh-HHhhcCCceeEEeccchhHHHHHH
Confidence 357899999999999999999774 2432 24788888642 1111 11 11112221 1 111112 34
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
..|+. +|++|=+|- ..++.+++++-.+ ..=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s~--~~~~l~Im~acle--aGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVSI--GISSLALIILCNQ--KGALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECCS--SSCHHHHHHHHHH--HTCEEEESSC
T ss_pred HHhcC--CCEEEECCc--cccCHHHHHHHHH--cCCCEEECCC
Confidence 46664 599996553 3577788887654 2334566666
No 142
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.28 E-value=0.96 Score=47.84 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=63.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~ea 406 (516)
.++..+|.|+|+|..|.++|..|.+. |. ++++.|+. .++ .+..++.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~~~---~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----REK---TEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----HHH---HHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----HHH---HHHHHhhCCCCCeEEeCCHHHH
Confidence 35677899999999999999998653 53 57777763 111 1111111100 01123578898
Q ss_pred hccc-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 407 VKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 407 v~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
++.. ++|++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 488877 45545567888998887543 456888899865
No 143
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=88.22 E-value=0.67 Score=46.01 Aligned_cols=124 Identities=18% Similarity=0.273 Sum_probs=74.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC--CCcccCCCccCCchhchhhccccCCC----CCHHH
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEPV----NNLLD 405 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~~A~~~~~~----~~L~e 405 (516)
||+|.|| |..|..++..|+. .|+ ...+.|+|. +---..+-..++.+. .++....-.+ .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDA-LAGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHH-HTTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHh-HHhcCCCeEEEeCCcchHH
Confidence 8999999 9999998888753 243 256899996 210000000012211 1222100011 13788
Q ss_pred HhcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEE
Q 010153 406 AVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIF 469 (516)
Q Consensus 406 av~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aif 469 (516)
++++ +|++|=+.+.+ |. .+++++++|.+++ +.+|+--|||. ....+-+++.+ .-+-+|
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv---~~~t~~~~k~~~~p~~rvi 144 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV---DVMTYKALVDSKFERNQVF 144 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH---HHHHHHHHHHHCCCTTSEE
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH---HHHHHHHHHhhCcChhcEE
Confidence 8987 99988666544 21 4668889999999 99999999996 45555555542 122466
Q ss_pred ecCC
Q 010153 470 ASGS 473 (516)
Q Consensus 470 AsGS 473 (516)
++|.
T Consensus 145 G~gt 148 (313)
T 1hye_A 145 GLGT 148 (313)
T ss_dssp ECTT
T ss_pred EeCc
Confidence 7653
No 144
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.17 E-value=0.16 Score=51.02 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
-.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999998764 64 57888874
No 145
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.12 E-value=0.46 Score=50.06 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhhCCCeeeEeeeCCCchHHHHHHHHc-CCCcee--ccCCcchHHHHHHHHHHHHHHhCC--------Ccc
Q 010153 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TLA 330 (516)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr-~~~~~F--nDDiQGTaaV~LAgll~Al~~~g~--------~L~ 330 (516)
+..+++.+...+ ++ |.++-+......++-++|. ..+|++ |+..-+.+.....-++..+..... .-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 566666667777 43 5555444455667888986 467754 666666676666666666543211 123
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
..+|+|+|||.||+..|..+.+ .|+ ++.++|.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~ 243 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGE 243 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEEC
Confidence 4679999999999999998765 253 5667765
No 146
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.11 E-value=0.38 Score=46.34 Aligned_cols=104 Identities=15% Similarity=0.255 Sum_probs=60.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCC--C-----ccCCchhch-----hhcc
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS--R-----KDSLQHFKK-----PWAH 395 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~--R-----~~~l~~~k~-----~~A~ 395 (516)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-+=.++ | .+++-..|. .+.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~ 96 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR 96 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHH
Confidence 56788999999999999999999875 65 689999987421110 0 000111111 1111
Q ss_pred c---------cCCCC--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 396 E---------HEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 396 ~---------~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
- ..... ++.+.++. .|++|.++.. .-+...+-..+.....|+|.+-.
T Consensus 97 ~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~~~~l~~~~~~~~~p~i~~~~ 154 (249)
T 1jw9_B 97 INPHIAITPVNALLDDAELAALIAE--HDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSGAA 154 (249)
T ss_dssp HCTTSEEEEECSCCCHHHHHHHHHT--SSEEEECCSS--HHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HCCCcEEEEEeccCCHhHHHHHHhC--CCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEeee
Confidence 0 00111 34556664 8998877642 23455555555555688887633
No 147
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.91 E-value=1.7 Score=44.72 Aligned_cols=159 Identities=15% Similarity=0.139 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCe
Q 010153 310 TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 368 (516)
Q Consensus 310 TaaV~LAgll~Al~~---------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~ 368 (516)
+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+ +
T Consensus 134 vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~ 201 (365)
T 4hy3_A 134 VAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------R 201 (365)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------E
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------E
Confidence 455567777776652 2346889999999999999999998743 254 6
Q ss_pred EEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEc----cCCCCCCCHHHHHHHHcCCCCcEEEE
Q 010153 369 ICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILA 444 (516)
Q Consensus 369 i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFa 444 (516)
++..|+.. . ..... ...-...+|.|+++. .|+++=. ....++++++.++.|. +..++.=
T Consensus 202 V~~~d~~~----~----~~~~~----~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN 264 (365)
T 4hy3_A 202 IRVFDPWL----P----RSMLE----ENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFIL 264 (365)
T ss_dssp EEEECSSS----C----HHHHH----HTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEE
T ss_pred EEEECCCC----C----HHHHh----hcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEE
Confidence 77777631 1 00011 111112579999987 9999843 2334689999999997 6778887
Q ss_pred cCCCCCCCCCCHHHHhcccCCcEEEecCCC-C--CceeeCCEEeccccccceeecccchHHHH
Q 010153 445 LSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQVYNHNHFAFAKIPII 504 (516)
Q Consensus 445 LSNPt~~~Ectpe~A~~wt~G~aifAsGSP-f--~pv~~~Grt~~p~Q~NN~yiFPGiglg~i 504 (516)
.|.-..--|-.-.+|++ .|+.- | |.. | +|..-+ ..--+..|+.+-|=+|-...
T Consensus 265 ~aRG~~vde~aL~~aL~--~g~i~-a-aLDV~~~EPl~~~---~pL~~~~nvilTPHia~~t~ 320 (365)
T 4hy3_A 265 LSRADVVDFDALMAAVS--SGHIV-A-ASDVYPEEPLPLD---HPVRSLKGFIRSAHRAGALD 320 (365)
T ss_dssp CSCGGGSCHHHHHHHHH--TTSSE-E-EESCCSSSSCCTT---CGGGTCTTEEECCSCSSCCH
T ss_pred CcCCchhCHHHHHHHHH--cCCce-E-EeeCCCCCCCCCC---ChhhcCCCEEECCccccCHH
Confidence 77643223333334543 46543 3 321 1 111000 01124678888887775443
No 148
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.87 E-value=0.76 Score=46.71 Aligned_cols=100 Identities=22% Similarity=0.178 Sum_probs=59.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc--hhhccc---cCC---CCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWAHE---HEP---VNN 402 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k--~~~A~~---~~~---~~~ 402 (516)
..||.|+|+|+-|.++|..|.+. | .+++++|++-- +.+.++... ..|-.. .+. ..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~----~~~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESD----HVDEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHH----HHHHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHH----HHHHHHHcCCCcccCCCCccCCCeEEECC
Confidence 46899999999999999998653 4 35777777411 000011000 001000 011 257
Q ss_pred HHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010153 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (516)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (516)
+.|+++. +|++| ++... .+.+++++.++.+- +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888876 78777 33332 46778888887643 4567778888653
No 149
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=87.62 E-value=5.4 Score=40.10 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=82.2
Q ss_pred CCCceeccCCcch---HHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (516)
Q Consensus 298 ~~~~~FnDDiQGT---aaV~LAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (516)
..|.|.|---..+ |=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4677777533333 44468888877651 34679999999999999999999988642
Q ss_pred hhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010153 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (516)
Q Consensus 356 ~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~ 431 (516)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 53 588888742 11 1 11 1121 2379999986 899885421 23689999999
Q ss_pred HHHcCCCCcEEEEcCCCC
Q 010153 432 AMASFNEKPLILALSNPT 449 (516)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt 449 (516)
.|. +..++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 996 567888777643
No 150
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.51 E-value=1.8 Score=44.13 Aligned_cols=96 Identities=9% Similarity=0.202 Sum_probs=61.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHh
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav 407 (516)
++..||.|+|.|..|..+|..|... | -+++++|+. .++ . +.++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~~---~----~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VNA---V----QALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HHH---H----HHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HHH---H----HHHHHCCCEEeCCHHHHH
Confidence 4567999999999999999998763 5 357777763 111 1 122221 12236888888
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 863 568877 333333 678888887654 3566888787643
No 151
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=87.50 E-value=6.5 Score=40.01 Aligned_cols=121 Identities=14% Similarity=0.211 Sum_probs=82.1
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcchHHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~----------~----------g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 354 (516)
..|++.|----. +|=-+++-+|+..|. . |..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 367777764333 444568888877651 2 3468899999999999999999988642
Q ss_pred HhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHH
Q 010153 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 430 (516)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv 430 (516)
|+ +++.+|+.. .. . .. ..+ ...+|.|+++. .|+++=.-- ..++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~~-~-~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----NP-E-FE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----CG-G-GT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----hh-h-hh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888742 10 0 10 111 11389999987 999885432 2478999999
Q ss_pred HHHHcCCCCcEEEEcCCCC
Q 010153 431 EAMASFNEKPLILALSNPT 449 (516)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt 449 (516)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9996 677888777643
No 152
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.43 E-value=6.7 Score=39.36 Aligned_cols=139 Identities=15% Similarity=0.121 Sum_probs=89.0
Q ss_pred CCCceeccCCcch---HHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 298 TTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 298 ~~~~~FnDDiQGT---aaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
..|.|.|----.+ |=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~---- 167 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG---- 167 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH----
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH----
Confidence 5677777543333 44478888887762 2356889999999999999999998864
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (516)
.|+ +++.+|+.. . . . . ..++. ...++.|+++. .|+++=.-. ..++++++.++.
T Consensus 168 -~G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 224 (333)
T 1j4a_A 168 -FGA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIAK 224 (333)
T ss_dssp -TTC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHHH
T ss_pred -CCC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHhh
Confidence 264 688888632 1 1 0 1 11221 12379999986 899885422 236788999998
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010153 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (516)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~ai 468 (516)
|. +..++.-.|.-...-|-.-.+|++ +|+.-
T Consensus 225 mk---~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ 255 (333)
T 1j4a_A 225 MK---QDVVIVNVSRGPLVDTDAVIRGLD--SGKIF 255 (333)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 86 577888787743223333334443 35443
No 153
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=87.30 E-value=1.3 Score=44.71 Aligned_cols=122 Identities=15% Similarity=0.129 Sum_probs=79.1
Q ss_pred CCceeccCCc---chHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcC
Q 010153 299 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 359 (516)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Al~~----------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G 359 (516)
.|++.|---- .+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4555554221 2344567777777663 35689999999999999999999998543 6
Q ss_pred CChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHHHc
Q 010153 360 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMAS 435 (516)
Q Consensus 360 ~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~Ma~ 435 (516)
+ +++.+|+.. .. .... .. .....+|.|+++. .|+++=.- ...++++++.++.|.
T Consensus 164 ~-------~V~~~dr~~----~~---~~~~----~~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG----RE---RAGF----DQ-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC----CC---CTTC----SE-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh----HH---hhhh----hc-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 4 688888754 11 1111 11 1123578888886 88887431 224678888887775
Q ss_pred CCCCcEEEEcCCCC
Q 010153 436 FNEKPLILALSNPT 449 (516)
Q Consensus 436 ~~erPIIFaLSNPt 449 (516)
+..++.=.|.-.
T Consensus 222 --~gailIN~aRG~ 233 (324)
T 3hg7_A 222 --PGAILFNVGRGN 233 (324)
T ss_dssp --TTCEEEECSCGG
T ss_pred --CCcEEEECCCch
Confidence 577888777643
No 154
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.12 E-value=1 Score=42.46 Aligned_cols=98 Identities=15% Similarity=0.226 Sum_probs=57.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
.||.|+|+|..|..+|+.+... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 5899999999999999998763 531 12478888873 1 1122221111 11123578888876
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010153 412 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (516)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (516)
+|++|= +..+ ...+++++.+.... +..+|...++-.+
T Consensus 64 aDvVil-av~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILIL-SIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEEE-CSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEEE-EeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 788773 3333 45667777776543 3557776776653
No 155
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=87.10 E-value=1.9 Score=43.52 Aligned_cols=135 Identities=16% Similarity=0.292 Sum_probs=86.5
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
..|++.|--- +.+|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777653 22444467777776642 26679999999999999999999988542
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (516)
|+ +++.+|+..- . .......+ ...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 6788887421 1 11111111 12468888887 89888432 2246899999988
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 433 MASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
|. +..++.=.|.-..--|-.-.+|++
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH
Confidence 86 577888777643223333334443
No 156
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.98 E-value=0.79 Score=46.04 Aligned_cols=110 Identities=9% Similarity=0.142 Sum_probs=61.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCC-CccCCchhc--hhhccc------cCCCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE------HEPVNN 402 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~-R~~~l~~~k--~~~A~~------~~~~~~ 402 (516)
.||.|+|+|..|.++|..|.++.... . .-..+++++|+..-+... +.+.+.... ..|-.. .....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 48999999999999999998753110 0 001468888875321000 000011000 000000 001246
Q ss_pred HHHHhcccCCcEEEEccCCCCCCCHHHHHHHHc----C-CCCcEEEEcCCCCC
Q 010153 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----F-NEKPLILALSNPTS 450 (516)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~----~-~erPIIFaLSNPt~ 450 (516)
+.|+++. +|++| ++... ...+++++.+.. . .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7888876 88777 33322 577888888875 3 34668888998653
No 157
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.78 E-value=1.7 Score=38.17 Aligned_cols=98 Identities=12% Similarity=0.095 Sum_probs=59.6
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~ 408 (516)
..+|+|.|| |-.|..+++.|++. | .++++++++.- +...+...+..+.. +.....++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA-----G-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-----C-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 88888888887652 4 36888877421 10111011111111 1122235778887
Q ss_pred ccCCcEEEEccCCCCC---------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 409 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
. +|++|=+.+.... .+..++++|.+..-+.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 6 8999987765431 2567888887766667888544
No 158
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.75 E-value=0.76 Score=45.12 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.|+..+++..|.. .+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666777766654 56899999999999999888765 364 679988873
No 159
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=86.72 E-value=4.2 Score=41.04 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=88.5
Q ss_pred CCceeccCCc---chHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 299 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
.|++.|---- .+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 5555554222 3455567777777652 36679999999999999999999998642
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (516)
|+ +++.+|+.. . . . . +...-...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 164 --G~-------~V~~~d~~~----~--~-~--~----~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVK----R--E-D--L----KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSC----C--H-H--H----HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCc----c--h-h--h----HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 54 688888642 1 0 0 0 0111112459999987 99888442 2346899999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010153 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (516)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~ai 468 (516)
|. +..|+.=.|.-..--|-.-.+|++ .|+.-
T Consensus 220 mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~ 250 (334)
T 2pi1_A 220 MK---DGVYLINTARGKVVDTDALYRAYQ--RGKFS 250 (334)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHHH--TTCEE
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 96 677888777644223333344543 45544
No 160
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=86.42 E-value=0.85 Score=45.63 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=70.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHhcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~~L~eav~~ 409 (516)
.||.|+|||..|..+|-+|... |+ ...+.|+|.+-=...+-.-+|.+- .++....... .+-.+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~ 69 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC
Confidence 3799999999999999887653 54 357999997521111111113221 1222111111 122356776
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcc
Q 010153 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 462 (516)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~w 462 (516)
.|++|=+.+.+ |- .-+++++++++++.+.||.-.|||. ..+..-+++.
T Consensus 70 --aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv---d~~t~i~~k~ 131 (294)
T 2x0j_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp --CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred --CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc---hhhHHhhHHH
Confidence 89998555543 31 1246778888999999999999996 4555556554
No 161
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.34 E-value=1.2 Score=41.99 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=56.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc---hhhccccCCCCCHHHHhcc
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k---~~~A~~~~~~~~L~eav~~ 409 (516)
||.|+|+|..|..+|..|.+. | .+++++|+.- .+.+.+.... ..+-.. -...+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-eeecC-ccccCC
Confidence 799999999999999998753 4 3688888742 2111111100 000000 01122 466765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 410 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
+|++|= +.... -.+++++.++.. .+..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 898874 33332 358999988764 3456777788865
No 162
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.18 E-value=1.3 Score=42.49 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=56.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
-.||.|+|+|..|..+|..+... |. ..+++++|++. . .+...++.-.. .....++.++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~----~---~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD----R---SRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH----H---HHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH----H---HHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888641 1 11111110000 0012356666765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNP 448 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNP 448 (516)
+|++| ++..+... +++++.+... .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 44433333 7888887654 355676666663
No 163
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.02 E-value=0.91 Score=48.26 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999998764 54 67788863
No 164
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.89 E-value=0.88 Score=46.06 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=26.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
-.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988764 65 5778885
No 165
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.80 E-value=2.3 Score=42.00 Aligned_cols=100 Identities=9% Similarity=0.131 Sum_probs=59.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc-CCCCCHHHHhc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVK 408 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~-~~~~~L~eav~ 408 (516)
+..||.|+|+|..|.++|..|... |.. ...+++++|+. .++ ..+. .+.... .-..+..++++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~----~l~~~G~~~~~~~~e~~~ 83 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVS----ALRKMGVKLTPHNKETVQ 83 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHH----HHHHHTCEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHH----HHHHcCCEEeCChHHHhc
Confidence 345899999999999999998653 531 11468888763 110 0011 111111 11146777777
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 010153 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (516)
. +|++| ++..+ ...+++++.+... .+..+|.-+||..+
T Consensus 84 ~--aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 84 H--SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp H--CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred c--CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 6 78776 33333 4667788777653 34567777888764
No 166
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=85.68 E-value=5.5 Score=40.22 Aligned_cols=147 Identities=14% Similarity=0.057 Sum_probs=82.1
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 010153 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (516)
Q Consensus 326 g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~e 405 (516)
|..|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|+.. .+ ....+ .+ ......++.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAP----AD---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSC----CC---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCC----cc---hhhHh-hc--CcEEeCCHHH
Confidence 5678999999999999999999988522 253 688888642 11 11111 00 0011247888
Q ss_pred HhcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeC
Q 010153 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYN 481 (516)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~ 481 (516)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-..--|-.-.+|++ +|+ |.+.|..+-..+-.
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg~~vd~~aL~~aL~--~~~-i~gaglDv~~~EP~ 288 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARGPVISQDALIAALK--SGK-LLSAGLDVHEFEPQ 288 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHH--TTS-EEEEEESSCTTTTS
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCCchhCHHHHHHHHH--hCC-ceEEEeccCCCCCC
Confidence 8886 898884421 23688888888885 566777666532112222344443 454 33333222111100
Q ss_pred CEEeccccccceeecccchHH
Q 010153 482 GKVFVPGQVYNHNHFAFAKIP 502 (516)
Q Consensus 482 Grt~~p~Q~NN~yiFPGiglg 502 (516)
. ...--+..|+.+-|=+|-.
T Consensus 289 ~-~~~L~~~~nviltPH~~~~ 308 (348)
T 2w2k_A 289 V-SKELIEMKHVTLTTHIGGV 308 (348)
T ss_dssp C-CHHHHTSSSEEECCSCTTC
T ss_pred C-CchhhcCCCEEEcCcCCCC
Confidence 0 0001135678888876643
No 167
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.65 E-value=9.6 Score=37.82 Aligned_cols=151 Identities=11% Similarity=0.064 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEc
Q 010153 310 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (516)
Q Consensus 310 TaaV~LAgll~Al~~~----------------g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (516)
+|=-+++-+|+..|.. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445666677665531 1458899999999999999999998653 64 688888
Q ss_pred CCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 374 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 374 s~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
+.. .. ... + ....+|.|+++. .|+++=.- ...++++++.++.|. +..+|.=.|.-.
T Consensus 153 r~~----~~---~~~-----~---~~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----D---VISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----S---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----c---cccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 742 11 111 1 123589999987 89887432 224688899988886 677888777643
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCC--CceeeCCEEeccccccceeecccch
Q 010153 450 SQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQVYNHNHFAFAK 500 (516)
Q Consensus 450 ~~~Ectpe~A~~wt~G~aifAsGSPf--~pv~~~Grt~~p~Q~NN~yiFPGig 500 (516)
.--|-.-.+|++ +|+.-.|.=--| +|. ..--+..|+.+-|=+|
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHia 257 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVA 257 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCS
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCcccc
Confidence 222333334443 343322211011 111 1123456888888766
No 168
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.38 E-value=0.86 Score=37.90 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=51.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhh----cc-ccCCCCCHHH
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----AH-EHEPVNNLLD 405 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~----A~-~~~~~~~L~e 405 (516)
+.+|+|+|+|..|..+|+.|... | .+++++|++- ++ +...+..+ .. +......|.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-----g-------~~v~~~d~~~----~~---~~~~~~~~~~~~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-----G-------HDIVLIDIDK----DI---CKKASAEIDALVINGDCTKIKTLED 64 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCH----HH---HHHHHHHCSSEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----HH---HHHHHHhcCcEEEEcCCCCHHHHHH
Confidence 35899999999999999888652 4 3688888731 11 11111111 11 1001112332
Q ss_pred H-hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 406 A-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 406 a-v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
+ ++ ++|++|=+.... ..+..+.+...+.+...||.-.+||.
T Consensus 65 ~~~~--~~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~ 106 (140)
T 1lss_A 65 AGIE--DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARISEIE 106 (140)
T ss_dssp TTTT--TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred cCcc--cCCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEecCHh
Confidence 2 33 589988765432 22222333333445566777666664
No 169
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.37 E-value=3.5 Score=42.81 Aligned_cols=144 Identities=11% Similarity=0.025 Sum_probs=83.0
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-c-CCCCCH
Q 010153 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H-EPVNNL 403 (516)
Q Consensus 326 g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~-~~~~~L 403 (516)
+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. . ..+.. . ....+|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~----~~---~-----~~~~~~G~~~~~~l 241 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRHR----LP---E-----SVEKELNLTWHATR 241 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CC---H-----HHHHHHTCEECSSH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCCc----cc---h-----hhHhhcCceecCCH
Confidence 567999999999999999999998753 253 577777631 11 1 11111 0 112478
Q ss_pred HHHhcccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCC--c
Q 010153 404 LDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--P 477 (516)
Q Consensus 404 ~eav~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~--p 477 (516)
.|+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-.---|-.-.+|++ +|+.--|.--=|. |
T Consensus 242 ~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP 314 (393)
T 2nac_A 242 EDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQP 314 (393)
T ss_dssp HHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSS
T ss_pred HHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCC
Confidence 898886 89888542 224688888888886 567888777632112222334443 4553322111111 1
Q ss_pred eeeCCEEeccccccceeecccchHHH
Q 010153 478 FEYNGKVFVPGQVYNHNHFAFAKIPI 503 (516)
Q Consensus 478 v~~~Grt~~p~Q~NN~yiFPGiglg~ 503 (516)
..-+ . .--+..|+.+-|=+|-..
T Consensus 315 ~~~~-~--pL~~~~nvilTPHia~~T 337 (393)
T 2nac_A 315 APKD-H--PWRTMPYNGMTPHISGTT 337 (393)
T ss_dssp CCTT-C--GGGTSTTBCCCCSCTTCS
T ss_pred CCCC-C--hhHcCCCEEECCCCCcCc
Confidence 1000 0 012456888888877543
No 170
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.30 E-value=4.1 Score=40.65 Aligned_cols=122 Identities=15% Similarity=0.173 Sum_probs=78.4
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Al~~---------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
..+.|.|----. +|=-+++.+|+..|. .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 456666654323 344467888877663 2456889999999999999999998753
Q ss_pred HHhhcCCChhcccCeEEEEcC-CCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHH
Q 010153 354 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 428 (516)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvDs-~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~e 428 (516)
.| -+++.+|+ .. . . ...+ .+ ......++.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G-------~~V~~~d~~~~----~--~--~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FD-------MDIDYFDTHRA----S--S--SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TT-------CEEEEECSSCC----C--H--HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CC-------CEEEEECCCCc----C--h--hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 25 36888886 31 0 0 0011 01 00112378898886 898874421 23578888
Q ss_pred HHHHHHcCCCCcEEEEcCC
Q 010153 429 VIEAMASFNEKPLILALSN 447 (516)
Q Consensus 429 vv~~Ma~~~erPIIFaLSN 447 (516)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888885 5678887776
No 171
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=84.98 E-value=0.66 Score=45.89 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=65.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc---ccCCCccCCchhchhhccccCCCCCHHHHh
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL---i~~~R~~~l~~~k~~~A~~~~~~~~L~eav 407 (516)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ...... ++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999988754 24310000137999997420 000000 11111112322211225688889
Q ss_pred cccCCcEEEEccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 86 9999977665431 3566788888875 566778899996
No 172
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.96 E-value=2.3 Score=45.29 Aligned_cols=98 Identities=13% Similarity=0.190 Sum_probs=61.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~~A-~~~~~~~~L~eav~~ 409 (516)
.+|.|+|+|..|.++|..|.+. |. +++++|+. .++ .+...+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~~---~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QSK---VDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SHH---HHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HHH---HHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998763 53 57777763 111 111111 000 011123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 478777 44444456778888776543 356888888754
No 173
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.77 E-value=0.27 Score=43.92 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=53.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~ea 406 (516)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++- ++.+.+......... +......|.++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~~----~~~~~~~~~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIRE----EAAQQHRSEGRNVISGDATDPDFWERI 100 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESCH----HHHHHHHHTTCCEEECCTTCHHHHHTB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECCH----HHHHHHHHCCCCEEEcCCCCHHHHHhc
Confidence 35677999999999999999988542 04 3588888741 111101100000000 10111123443
Q ss_pred --hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 407 --VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 407 --v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
++ ++|++|=++... .-+..++....+.+....|++.+|
T Consensus 101 ~~~~--~ad~vi~~~~~~-~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 101 LDTG--HVKLVLLAMPHH-QGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CSCC--CCCEEEECCSSH-HHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCCC--CCCEEEEeCCCh-HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 33 589998655432 334455555555554445555544
No 174
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.77 E-value=0.5 Score=45.08 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=55.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc------ccCCCCCHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPVNNLLD 405 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~------~~~~~~~L~e 405 (516)
.||.|+|+|..|..+|..|... | .+++++|++.- +.+.+......... ..-...+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999988653 4 36888887421 00001100000000 0000112223
Q ss_pred Hhccc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 010153 406 AVKVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (516)
Q Consensus 406 av~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (516)
+.+.+ ++|++|= +... -..+++++.+++. .+..+|..++|...
T Consensus 68 ~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 33211 3788773 3333 2468888888764 34678888998753
No 175
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.74 E-value=0.74 Score=46.70 Aligned_cols=38 Identities=26% Similarity=0.418 Sum_probs=33.6
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
++|++.||+++|+|..|..||+.|+.+ |+ ++|.++|.+
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 467889999999999999999999886 75 799999975
No 176
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.61 E-value=0.82 Score=44.41 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|.+||..++.+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998763 53 68888874
No 177
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=84.55 E-value=4.6 Score=40.87 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=80.1
Q ss_pred CCceeccCCc---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010153 299 THLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (516)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (516)
.|+|.|---- .+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 5667765322 2444567888887664 2567999999999999999999998753
Q ss_pred cCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 010153 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (516)
Q Consensus 358 ~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (516)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=.- ...++++++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 578888631 1 10 1111 0112479999986 89988542 1235788888888
Q ss_pred HHcCCCCcEEEEcCCC
Q 010153 433 MASFNEKPLILALSNP 448 (516)
Q Consensus 433 Ma~~~erPIIFaLSNP 448 (516)
|. +..++.=.|.-
T Consensus 245 mk---~gailIN~arg 257 (335)
T 2g76_A 245 CK---KGVRVVNCARG 257 (335)
T ss_dssp SC---TTEEEEECSCT
T ss_pred CC---CCcEEEECCCc
Confidence 86 57788878773
No 178
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=84.44 E-value=1.3 Score=45.56 Aligned_cols=96 Identities=20% Similarity=0.322 Sum_probs=54.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-----------ccCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 400 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-----------~~~~~ 400 (516)
.||+|+|||-.|..+|+.|.+ .|- .-.++.++|++ .++ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999999777777776643 231 01478888874 111 2222222211 11112
Q ss_pred CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 401 ~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
.++.++++..++|++|=+++. .+..+++++..+.. ..+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888888889999977653 24566776654433 4444 2544
No 179
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.42 E-value=0.5 Score=47.98 Aligned_cols=129 Identities=18% Similarity=0.236 Sum_probs=77.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 405 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~--~~~~~L~e 405 (516)
+....||.|+|||..|.++|..++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 368999997410001000012211 1232211 0123454
Q ss_pred HhcccCCcEEEEccCC---CC-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 010153 406 AVKVIKPTILIGSSGV---GR-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG--RAIF 469 (516)
Q Consensus 406 av~~vkptvLIG~S~~---~g-----~------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G--~aif 469 (516)
++++ .|++|=+.+. +| + +-+++.+.|+++++.-+|+-.|||. .+..+-+++.+.= +-+|
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---di~t~~~~k~sg~p~~rvi 158 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV---DILTYVAWKISGFPKNRVI 158 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH---HHHHHHHHHHhCCCHHHEE
Confidence 5776 8988744333 33 1 2257788888999999999999996 4556666665421 3466
Q ss_pred ecCC
Q 010153 470 ASGS 473 (516)
Q Consensus 470 AsGS 473 (516)
.+|.
T Consensus 159 G~gt 162 (331)
T 4aj2_A 159 GSGC 162 (331)
T ss_dssp ECTT
T ss_pred eecc
Confidence 6653
No 180
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=84.33 E-value=1.2 Score=46.33 Aligned_cols=97 Identities=18% Similarity=0.255 Sum_probs=52.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChh-cccCeEEEEcCCC-------cccCCCcc--CCchhchhhccccCCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRKD--SLQHFKKPWAHEHEPVN 401 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e-eA~~~i~lvDs~G-------Li~~~R~~--~l~~~k~~~A~~~~~~~ 401 (516)
.||.|+|||+=|+++|..+.+.-.. ...- +-.=++|..|..= .|...|.+ .|+..+.| ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999876321 1000 0012567655420 01122111 12211111 0001125
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN 437 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~ 437 (516)
+|.+++++ +|++|= .. +-.|-+++++.+..+-
T Consensus 110 dl~~al~~--ad~ii~-av-Ps~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF-NI-PHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEEE-CS-CGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEEE-EC-ChhhhHHHHHHhcccc
Confidence 89999987 777762 22 2257788888887543
No 181
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.24 E-value=0.46 Score=43.24 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=58.7
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc---c--ccCCCCCHHHH
Q 010153 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 406 (516)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A---~--~~~~~~~L~ea 406 (516)
||+|+| +|..|..+|+.+.+ .| .+++++|++ .++ ....++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EEK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HHH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999998864 24 368888863 111 111111110 0 011 2468888
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
++. +|++|=+.. . -..+++++.+.+..+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 886 899885443 3 235677776654324678889999764
No 182
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=84.13 E-value=0.71 Score=46.34 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=59.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc----ccCCCCCHHHHh
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAV 407 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~----~~~~~~~L~eav 407 (516)
.||+|+|||-.|-.+|+.|.+ ..++.++|... +.++.. ++++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~-~~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKV-KEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHH-TTTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHH-hccCCcEEEecCCHHHHHHHH
Confidence 379999999999888877632 13577777531 112211 11221 122234688888
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010153 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (516)
++ .|++|-+. |..+..+++++-.+... . ++-+|--......--++|.+
T Consensus 76 ~~--~DvVi~~~--p~~~~~~v~~~~~~~g~-~-yvD~s~~~~~~~~l~~~a~~ 123 (365)
T 3abi_A 76 KE--FELVIGAL--PGFLGFKSIKAAIKSKV-D-MVDVSFMPENPLELRDEAEK 123 (365)
T ss_dssp TT--CSEEEECC--CGGGHHHHHHHHHHHTC-E-EEECCCCSSCGGGGHHHHHH
T ss_pred hC--CCEEEEec--CCcccchHHHHHHhcCc-c-eEeeeccchhhhhhhhhhcc
Confidence 86 89998544 45688889888765443 3 55566433222223345543
No 183
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.11 E-value=0.65 Score=51.27 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 68899999999999999999999875 75 7899999864
No 184
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.01 E-value=1.9 Score=43.29 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=87.4
Q ss_pred CCCceeccCC----cchHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010153 298 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (516)
Q Consensus 298 ~~~~~FnDDi----QGTaaV~LAgll~Al~~----------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (516)
..+++.|--- +.+|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4666665321 34555678888887764 2567899999999999999999998854
Q ss_pred cCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHH
Q 010153 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (516)
Q Consensus 358 ~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (516)
.|+ +++.+|+..- ...... .+ ....+|.|+++. .|+++=.- ...++++++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 264 5777876421 111111 11 011468888886 89887431 22468889988888
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010153 434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (516)
Q Consensus 434 a~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~ai 468 (516)
. +..++.=.|.-..--|-.-.+|++ .|+.-
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~ 249 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLK 249 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCcc
Confidence 6 577888777644223333334443 35543
No 185
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.87 E-value=0.58 Score=51.47 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|++.||+|+|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478899999999999999999999875 75 799999976
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=83.82 E-value=0.82 Score=45.43 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..||||+|+|.||+.+|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999998654 31 1368888875
No 187
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=83.64 E-value=4.1 Score=41.51 Aligned_cols=168 Identities=15% Similarity=0.085 Sum_probs=101.6
Q ss_pred CCceeccCC--cchHHHHHHHHHHHHHH----------------------------hCCCcccceEEEeCcchHHHHHHH
Q 010153 299 THLVFNDDI--QGTASVVLAGVVAALKL----------------------------IGGTLAEHRFLFLGAGEAGTGIAE 348 (516)
Q Consensus 299 ~~~~FnDDi--QGTaaV~LAgll~Al~~----------------------------~g~~L~d~riv~~GAGsAg~GIA~ 348 (516)
.|+|.|.-- ..+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 566666321 23444567777776653 256789999999999999999999
Q ss_pred HHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCC
Q 010153 349 LIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRT 424 (516)
Q Consensus 349 ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~ 424 (516)
.+... |+ +++.+|+.. .. + .... .......+|.|+++. .|+++=.- ...++
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~ell~~--aDiV~l~~Plt~~t~~l 232 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDALFEQ--SDVLSVHLRLNDETRSI 232 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHHHHHH--CSEEEECCCCSTTTTTC
T ss_pred HHHhC-----CC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHHHHhh--CCEEEEeccCcHHHHHh
Confidence 88542 64 688888641 00 0 0000 001123589999987 89988432 23468
Q ss_pred CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCceeeCCEEeccccccceeecccc
Q 010153 425 FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQVYNHNHFAFA 499 (516)
Q Consensus 425 Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifA-----sGSPf~pv~~~Grt~~p~Q~NN~yiFPGi 499 (516)
++++.++.|. +..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++ ...--+..|+.+-|=+
T Consensus 233 i~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~------~~pL~~~~nvilTPHi 301 (352)
T 3gg9_A 233 ITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPILQ------GHTLLRMENCICTPHI 301 (352)
T ss_dssp BCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCCS------CCGGGGCTTEEECCSC
T ss_pred hCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCCC------CChhhcCCCEEECCCC
Confidence 9999999886 678998888744334444456654 3443211 1112210 0011245688888877
Q ss_pred hHH
Q 010153 500 KIP 502 (516)
Q Consensus 500 glg 502 (516)
|-.
T Consensus 302 a~~ 304 (352)
T 3gg9_A 302 GYV 304 (352)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 188
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.62 E-value=0.57 Score=47.79 Aligned_cols=118 Identities=17% Similarity=0.336 Sum_probs=69.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc-CCCCCHHHH
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 406 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~-~~~~~L~ea 406 (516)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999966554 365 247999997311001000012221 121100 011578899
Q ss_pred hcccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCCCCCCCCHHHHhccc
Q 010153 407 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTWS 463 (516)
Q Consensus 407 v~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IFaLSNPt~~~Ectpe~A~~wt 463 (516)
+++ +|++|=+.+.+ | ..-+++++.+.+++.+-+ |+-.|||. .....-|++.+
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv---d~~t~i~~k~s 140 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA---DITGLVTLIYS 140 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH---HHHHHHHHHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch---HHHHHHHHHHc
Confidence 987 89988444332 3 133567777888888885 88899995 44444555443
No 189
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=83.23 E-value=3.3 Score=41.03 Aligned_cols=94 Identities=16% Similarity=0.161 Sum_probs=54.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH-Hhcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKV 409 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~e-av~~ 409 (516)
-.||.|+|+|..|..+|..+... |. ..+++++|++- +.+...++.-+. .....++.+ +++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS 94 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc
Confidence 37999999999999999988763 64 24788888741 111111100000 001245666 6765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLS 446 (516)
+|++| ++.... -.+++++.+... .+.-||.-.+
T Consensus 95 --aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 --PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred --CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77777 444443 346677766543 3455665444
No 190
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=83.04 E-value=8.9 Score=38.31 Aligned_cols=137 Identities=19% Similarity=0.246 Sum_probs=74.4
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc
Q 010153 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 384 (516)
Q Consensus 305 DDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~ 384 (516)
++.++.....++..+.|++..+.+ .+++|+|.|||..|...+.+... .|. ++++.+|+.
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~--------- 216 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ--------- 216 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC---------
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC---------
Confidence 344555445566667777655543 56799999999877776655432 363 578877753
Q ss_pred CCchhchhhccc-------cCCCCCHHHHhcc---c---CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC-
Q 010153 385 SLQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS- 450 (516)
Q Consensus 385 ~l~~~k~~~A~~-------~~~~~~L~eav~~---v---kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~- 450 (516)
+.+..+++. .....++.+.++. . ++|++|=+++.+ ..-++.++.++. .=-|.-+..+..
T Consensus 217 ---~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~~---~G~vv~~G~~~~~ 289 (370)
T 4ej6_A 217 ---ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAKA---GGTVVILGVLPQG 289 (370)
T ss_dssp ---HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECSCCCTT
T ss_pred ---HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhcc---CCEEEEEeccCCC
Confidence 122233332 0112356666654 1 578998877633 233455566553 222333444332
Q ss_pred -CCCCCHHHHhcccCCcEEEec
Q 010153 451 -QSECTAEEAYTWSKGRAIFAS 471 (516)
Q Consensus 451 -~~Ectpe~A~~wt~G~aifAs 471 (516)
..+..+.+.+. ++.-|..+
T Consensus 290 ~~~~~~~~~~~~--~~~~i~g~ 309 (370)
T 4ej6_A 290 EKVEIEPFDILF--RELRVLGS 309 (370)
T ss_dssp CCCCCCHHHHHH--TTCEEEEC
T ss_pred CccccCHHHHHh--CCcEEEEe
Confidence 35666666542 34445443
No 191
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.94 E-value=2.3 Score=38.86 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=60.7
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch-hhcc-ccCCCCCH
Q 010153 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH-EHEPVNNL 403 (516)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~~A~-~~~~~~~L 403 (516)
.+|++.+|+|.|| |-.|..+++.|++. | -++++++++. ++.+.+..... .+.. +.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNK-----G-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhC-----C-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4678899999998 88899998888652 5 3688887741 11110111111 1111 111 567
Q ss_pred HHHhcccCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEEcCCC
Q 010153 404 LDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALSNP 448 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLSNP 448 (516)
.++++. +|++|=+.+.... -+..+++++.+..-+-|||.=|--
T Consensus 79 ~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 79 SHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp GGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred HHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 777875 9999977765421 145678888776667788865533
No 192
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.62 E-value=1 Score=41.81 Aligned_cols=94 Identities=15% Similarity=0.160 Sum_probs=53.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~ 408 (516)
-...||.|+|+|..|..+|+.+... |. +++++|++- ++ .. .++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHh
Confidence 3456899999999999999988652 52 577887631 11 11 11111000126777776
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010153 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (516)
. +|++|=+.. +. ..+++++ ++...+..+|.-+||+..
T Consensus 83 ~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 5 788773332 32 3344543 332224567888888763
No 193
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=82.62 E-value=0.7 Score=47.12 Aligned_cols=118 Identities=21% Similarity=0.224 Sum_probs=66.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc---cccCCCCCHHHH
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 406 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A---~~~~~~~~L~ea 406 (516)
.+.||+|+|||-+|-.+|+.|.+. .++.++|++ .++ +......+. -+.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999999887531 357788773 222 111111111 011122468888
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCC--CHHHHhcccCCcEEEecCCCCCce
Q 010153 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSEC--TAEEAYTWSKGRAIFASGSPFDPF 478 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ec--tpe~A~~wt~G~aifAsGSPf~pv 478 (516)
+++ +|++|-+.. . .+..+++++-.+ ..-.++-+|.-. +|. --++|.+ .|. .+..|+-|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~--~G~~~vD~s~~~--~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIK--SKVDMVDVSFMP--ENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHH--TTCCEEECCCCS--SCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHH--hCCeEEEccCCc--HHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 899997633 2 356667665443 233456677622 233 2344543 353 33455556654
No 194
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.43 E-value=2.3 Score=40.81 Aligned_cols=91 Identities=13% Similarity=0.196 Sum_probs=57.5
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
.||.|+|+ |..|..+|+.+... | -+++++|+. .+ .+...+. ..-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-----g-------~~V~~~~r~----~~---~~~~~~~----~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-----A-------HHLAAIEIA----PE---GRDRLQG----MGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-----S-------SEEEEECCS----HH---HHHHHHH----TTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----C-------CEEEEEECC----HH---HHHHHHh----cCCCcCCHHHHhcC-
Confidence 48999999 99999999998652 5 268888763 11 1111111 11112356777775
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
+|++|= +..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 898884 333323 68888888654 3456777788854
No 195
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.33 E-value=1.3 Score=45.87 Aligned_cols=118 Identities=25% Similarity=0.287 Sum_probs=67.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC--C-CHH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--N-NLL 404 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~-~L~ 404 (516)
.++.+||+|+|.|.+|+++|++|.+ .| .++...|.+-.- .++..+.+....-++ + .-.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~-------~~~~~~~L~~~gi~~~~g~~~~ 66 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFD-------ENPTAQSLLEEGIKVVCGSHPL 66 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGG-------GCHHHHHHHHTTCEEEESCCCG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCccc-------CChHHHHHHhCCCEEEECCChH
Confidence 4678999999999999999988865 36 468888875310 011111111110000 0 111
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEE
Q 010153 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKV 484 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt 484 (516)
+.++. .+|.+|=.++.+ .=++++.++... .-||+= | +|-++...+++.|--||| ||||
T Consensus 67 ~~~~~-~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~~---------~--~e~~~~~~~~~~IaVTGT-------nGKT 124 (451)
T 3lk7_A 67 ELLDE-DFCYMIKNPGIP-YNNPMVKKALEK--QIPVLT---------E--VELAYLVSESQLIGITGS-------NGKT 124 (451)
T ss_dssp GGGGS-CEEEEEECTTSC-TTSHHHHHHHHT--TCCEEC---------H--HHHHHHHCCSEEEEEECS-------SCHH
T ss_pred HhhcC-CCCEEEECCcCC-CCChhHHHHHHC--CCcEEe---------H--HHHHHHhcCCCEEEEECC-------CCHH
Confidence 12221 268888555654 456777776653 456651 2 233444456788888997 7876
Q ss_pred ec
Q 010153 485 FV 486 (516)
Q Consensus 485 ~~ 486 (516)
-.
T Consensus 125 TT 126 (451)
T 3lk7_A 125 TT 126 (451)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 196
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.16 E-value=6.1 Score=39.92 Aligned_cols=120 Identities=17% Similarity=0.261 Sum_probs=62.3
Q ss_pred HHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc
Q 010153 318 VVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 396 (516)
Q Consensus 318 ll~Al~~~g-~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~ 396 (516)
.+.|+.... .--.+++|+|+|||..|...+.+... .|. ++++.+|+. +.+..+++.
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHHHH
Confidence 344444333 34467899999999888776655432 364 578887752 122233321
Q ss_pred -------cCCCCCHHHHhcc----cCCcEEEEccCCCCCCCHHHHHHHH-cCCCCcEEEEcCCCCCCCCCCHHHHh
Q 010153 397 -------HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMA-SFNEKPLILALSNPTSQSECTAEEAY 460 (516)
Q Consensus 397 -------~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma-~~~erPIIFaLSNPt~~~Ectpe~A~ 460 (516)
.....++.+.++. -++|++|-+++......+..++.+. ...+.=-|..+..+....+......+
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~ 332 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQ 332 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHH
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHh
Confidence 0111345555543 3699999877643223445556550 00122233334444433455555443
No 197
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=82.15 E-value=9.7 Score=38.64 Aligned_cols=170 Identities=15% Similarity=0.089 Sum_probs=102.6
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHHh------------------------C-CCcccceEEEeCcchHHHHHHHH
Q 010153 298 TTHLVFNDDIQ---GTASVVLAGVVAALKLI------------------------G-GTLAEHRFLFLGAGEAGTGIAEL 349 (516)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Al~~~------------------------g-~~L~d~riv~~GAGsAg~GIA~l 349 (516)
..|.|.|---- .+|=-+++.+|+..|.. | ..|.+.++.|+|.|..|..+|+.
T Consensus 107 ~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~ 186 (347)
T 1mx3_A 107 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALR 186 (347)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHH
Confidence 46777775332 34445788888877621 1 46889999999999999999998
Q ss_pred HHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCC
Q 010153 350 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTF 425 (516)
Q Consensus 350 l~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~F 425 (516)
+.. .|+ +++.+|++- .. ...+.+ ......+|.|+++. .|+++=.- ...+++
T Consensus 187 l~~-----~G~-------~V~~~d~~~----~~-----~~~~~~--g~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 187 AKA-----FGF-------NVLFYDPYL----SD-----GVERAL--GLQRVSTLQDLLFH--SDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp HHT-----TTC-------EEEEECTTS----CT-----THHHHH--TCEECSSHHHHHHH--CSEEEECCCCCTTCTTSB
T ss_pred HHH-----CCC-------EEEEECCCc----ch-----hhHhhc--CCeecCCHHHHHhc--CCEEEEcCCCCHHHHHHh
Confidence 754 254 578787531 11 001111 01123479999986 89887532 224688
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCceeeCCEEeccccccceeecccch
Q 010153 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQVYNHNHFAFAK 500 (516)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifA-----sGSPf~pv~~~Grt~~p~Q~NN~yiFPGig 500 (516)
+++.++.|. +..++.-.|+=...-|..-.+|++ +|+.--| ..-|+++ .+. .--..+|+.+-|=+|
T Consensus 242 ~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~~~--~L~~~~nvi~tPHia 311 (347)
T 1mx3_A 242 NDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---SQG--PLKDAPNLICTPHAA 311 (347)
T ss_dssp SHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---TSS--TTTTCSSEEECSSCT
T ss_pred HHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---CCc--hHHhCCCEEEEchHH
Confidence 899888885 567888888754223333345543 3544322 2333221 010 012479999999887
Q ss_pred HH
Q 010153 501 IP 502 (516)
Q Consensus 501 lg 502 (516)
-.
T Consensus 312 ~~ 313 (347)
T 1mx3_A 312 WY 313 (347)
T ss_dssp TC
T ss_pred HH
Confidence 53
No 198
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=81.93 E-value=4 Score=39.29 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=62.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh----chhhcc-ccCCCCC
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 402 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~----k~~~A~-~~~~~~~ 402 (516)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... +..+.. +.....+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999999 99999999988764 52 2367777765321 111111110 111111 1122246
Q ss_pred HHHHhcccCCcEEEEccCCCCCC----------------CHHHHHHHHcCCCCcEEEEcC
Q 010153 403 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 446 (516)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999877654211 356788888776666888543
No 199
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=81.88 E-value=1.6 Score=42.99 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=66.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc
Q 010153 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (516)
Q Consensus 308 QGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (516)
++.....++.-+.|++...+- .+++|+|.|||..|..++.+... .|. ++++.+|+. ..| ++
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 203 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LA 203 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HG
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 333333444456667623333 88999999999888877665432 363 478888763 111 11
Q ss_pred hhchhhccc--cCCCCCHHHHhcc---cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH
Q 010153 388 HFKKPWAHE--HEPVNNLLDAVKV---IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTA 456 (516)
Q Consensus 388 ~~k~~~A~~--~~~~~~L~eav~~---vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectp 456 (516)
..++. |.. .....++.+.++. -++|++|=+++.. ...++.++.|+.. =-|.-++.+....+..+
T Consensus 204 ~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~ 272 (343)
T 2dq4_A 204 FARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALIPG---GEARILGIPSDPIRFDL 272 (343)
T ss_dssp GGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEEEE---EEEEECCCCSSCEEECH
T ss_pred HHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHhcC---CEEEEEecCCCCceeCc
Confidence 11221 221 0111356666653 3689998777632 2345666666532 23333444433344554
No 200
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=81.80 E-value=4.9 Score=42.02 Aligned_cols=82 Identities=23% Similarity=0.334 Sum_probs=52.7
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~ 409 (516)
--|++|+|+ |-+|.+.++.+... |.. ..++...|.+= ..+.. + + +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~--------------~---~-~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG--------------P---F-DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS--------------C---C-THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC--------------c---h-hhHhh
Confidence 468999999 99999999887552 541 11455666531 01100 0 1 23444
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.|++||+--. +-++|+|+++.|.+ +--+|.=+|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m~k--~gsVIVDVA 300 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNPNR--RLRTVVDVS 300 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCTTC--CCCEEEETT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcCcC--CCeEEEEEe
Confidence 8999998764 56899999999931 444565555
No 201
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.57 E-value=3.6 Score=39.13 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=56.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
.||.|+|+|..|..+|..+... |. ..+++++|++. .+ +...++.-.. .....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~----~~---~~~~~~~g~~-~~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP----ES---ISKAVDLGII-DEGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH----HH---HHHHHHTTSC-SEEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CC-----CcEEEEEeCCH----HH---HHHHHHCCCc-ccccCCHHHHhcC-C
Confidence 3799999999999999988653 53 13688888641 11 1111100000 0012467777761 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEEcCCCC
Q 010153 412 PTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSNPT 449 (516)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSNPt 449 (516)
+|++| ++... ..++++++.+.+ ..+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 33333 256677777654 23456777777744
No 202
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=81.45 E-value=1.6 Score=42.82 Aligned_cols=94 Identities=14% Similarity=0.160 Sum_probs=53.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 406 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~ea 406 (516)
.+...||.|+|+|..|.++|..|... |. +++++|++ .++ .. .++.. .....++.|+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~~---~~----~~~~~g~~~~~~~~e~ 62 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS----PGK---AA----ALVAAGAHLCESVKAA 62 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HHH---HH----HHHHHTCEECSSHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC----HHH---HH----HHHHCCCeecCCHHHH
Confidence 34567999999999999999998763 53 57777763 111 11 11111 1123577888
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHH--HHHcCCCCcEEEEcCC
Q 010153 407 VKVIKPTILIGSSGVGRTFTKEVIE--AMASFNEKPLILALSN 447 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~--~Ma~~~erPIIFaLSN 447 (516)
++. +|++|=+ .....-.++++. .+....+..||.-+|+
T Consensus 63 ~~~--aDvVi~~-vp~~~~~~~v~~~~~l~~~~~g~ivid~st 102 (306)
T 3l6d_A 63 LSA--SPATIFV-LLDNHATHEVLGMPGVARALAHRTIVDYTT 102 (306)
T ss_dssp HHH--SSEEEEC-CSSHHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred Hhc--CCEEEEE-eCCHHHHHHHhcccchhhccCCCEEEECCC
Confidence 876 7777632 221122333443 2222335667777765
No 203
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=81.41 E-value=3.6 Score=41.40 Aligned_cols=141 Identities=13% Similarity=0.062 Sum_probs=88.0
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 010153 298 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (516)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 354 (516)
..|++.|--- +.+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 3566665432 23445567777776653 2456899999999999999999998743
Q ss_pred HhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHH
Q 010153 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (516)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv 430 (516)
.|+ +++.+|+.. .. ....+ .+ .-...+|.|+++. .|+++=.- ...++++++.+
T Consensus 167 ---~G~-------~V~~~d~~~----~~---~~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKA----LD---TQTEQ-RL---GLRQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSC----CC---HHHHH-HH---TEEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCC----Cc---HhHHH-hc---CceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 354 688888742 01 11111 11 0112479999987 89888542 23468999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010153 431 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (516)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~ai 468 (516)
+.|. +..++.=.|+-...-|-.-.+|++ .|+.-
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~ 256 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAALE--RGQLG 256 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCcc
Confidence 9886 677888888744223333344543 45544
No 204
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=81.40 E-value=1 Score=39.06 Aligned_cols=34 Identities=6% Similarity=0.160 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
...+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 356899999999999999988652 4 468888874
No 205
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=81.29 E-value=6.3 Score=38.65 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999999775 52 478888873
No 206
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.27 E-value=2.4 Score=44.64 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=59.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-----cccCCCCCHHHHh
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 407 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-----~~~~~~~~L~eav 407 (516)
||.|+|+|..|..+|..|... |. +++++|+.. ++ .....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988653 53 577888631 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
+.. ++|++| ++...+...+++++.+... .+..||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 743 488887 4444444567788777543 3456888888865
No 207
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=80.97 E-value=2.1 Score=41.60 Aligned_cols=92 Identities=13% Similarity=0.155 Sum_probs=52.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
.||.|+|+|..|..+|..+... |. +++++|+. .++ +...++. ......++.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 86 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT----AEK---CDLFIQE---GARLGRTPAEVVST-- 86 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----GGG---GHHHHHT---TCEECSCHHHHHHH--
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC----HHH---HHHHHHc---CCEEcCCHHHHHhc--
Confidence 6899999999999999988652 53 57788763 111 1111110 00112467788775
Q ss_pred CcEEEEccCCCCCCCHHHHHHH----HcCCCCcEEEEcCCC
Q 010153 412 PTILIGSSGVGRTFTKEVIEAM----ASFNEKPLILALSNP 448 (516)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~M----a~~~erPIIFaLSNP 448 (516)
+|++|=+...+ .-.++++... ....+..+|+-+||-
T Consensus 87 ~DvVi~av~~~-~~~~~v~~~~~~~~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 87 CDITFACVSDP-KAAKDLVLGPSGVLQGIRPGKCYVDMSTV 126 (316)
T ss_dssp CSEEEECCSSH-HHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred CCEEEEeCCCH-HHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence 78777332211 2344555432 123355677778873
No 208
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=80.65 E-value=2.4 Score=41.81 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=27.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
....||.|+|+|..|.++|..+... |. +++++|+
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcC
Confidence 3457999999999999999998763 53 5777776
No 209
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=80.56 E-value=1.4 Score=42.78 Aligned_cols=22 Identities=27% Similarity=0.320 Sum_probs=19.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (516)
.||+|+|||.||+..|-.|.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~ 23 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH 23 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 4899999999999999988663
No 210
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=80.23 E-value=1.5 Score=41.25 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=56.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~ 408 (516)
+..||+|.|||-.|..+++.|++. | .+++.++++- +.+.+. ..+.. +.....++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----G-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 346899999999999998888653 5 3577777641 112111 11111 2122234556666
Q ss_pred ccCCcEEEEccCCCC-----------CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 409 VIKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 409 ~vkptvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
. ++|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999996654311 12567788777655567887543
No 211
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.19 E-value=2.2 Score=42.18 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998653 51 368888875
No 212
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=79.86 E-value=1.1 Score=44.48 Aligned_cols=102 Identities=13% Similarity=0.172 Sum_probs=58.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc--hhhccccCCCCCHHHHhc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWAHEHEPVNNLLDAVK 408 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k--~~~A~~~~~~~~L~eav~ 408 (516)
..||.|+|+|+.|..+|..|.++ | .++.++|+.--+..-+...+.... ..+........++.+ ++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cC
Confidence 46899999999999999998763 4 357888863110000000010000 000000001145665 44
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
.+|++| ++... ...+++++.++.. .+..+|..++|..
T Consensus 70 --~~D~Vi-lavk~-~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 --EQDVVI-VAVKA-PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp --CCSEEE-ECCCH-HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred --CCCEEE-EeCCc-hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 389887 44433 4667888888754 3567888999994
No 213
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=79.84 E-value=3.9 Score=42.90 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=61.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
..||.|+|+|..|..+|..|... |. ++.++|+. .+ .....++.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999998653 53 57777763 11 12222111100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
. ++|++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 488887 44444456778888776543 456888888865
No 214
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.74 E-value=3.7 Score=43.75 Aligned_cols=98 Identities=15% Similarity=0.214 Sum_probs=62.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~--~~~~~L~eav~~ 409 (516)
.+|.|+|+|..|.++|..|... |. ++++.|+. .++ .+...+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~~---~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VSK---VDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----THH---HHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HHH---HHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999998763 53 57777763 111 111111111110 113688998875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 410 I-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
+ +||++| ++...+.-++++++.+... .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 3 488777 4444445677788887654 4567888888854
No 215
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=79.24 E-value=1.7 Score=42.08 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|+|+|||.||+..|..+.+ .|. .++.++|++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 5689999999999999999865 253 2799999875
No 216
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=79.23 E-value=11 Score=38.05 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=63.4
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 010153 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (516)
Q Consensus 326 g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~e 405 (516)
|..|.+.++.|+|.|..|..+|+.+... |+ +++..|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999987543 54 56777752 11 1 111111 12257999
Q ss_pred HhcccCCcEEEEc----cCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 406 av~~vkptvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
.++. .|+++=. ....++|+++.++.|. +..++.=.|.
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR 231 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR 231 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc
Confidence 9987 8988743 2234799999999996 5667775554
No 217
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=78.97 E-value=2.2 Score=42.85 Aligned_cols=123 Identities=20% Similarity=0.278 Sum_probs=73.5
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCC--CCCHHHHhcc
Q 010153 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (516)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~--~~~L~eav~~ 409 (516)
||.|+| +|..|..+|.+|... .++ ...+.|+|.+-. ..+..-+|.+. ++-..-.. ..+..+++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 899999 799999999887542 133 268999999741 11111012211 11000000 0246788887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHH---Hhccc---CCcEEE
Q 010153 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEE---AYTWS---KGRAIF 469 (516)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~---A~~wt---~G~aif 469 (516)
.|++|=+.+.+ |- .-+++++.+.+++.+-+|+-.|||. .....- +++.+ .-+-+|
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---d~~t~~a~~~~k~sg~~p~~rv~ 144 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV---NTTVAIAAEVLKKAGVYDKNKLF 144 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH---HHHHHHHHHHHHHTTCCCTTSEE
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc---hhHHHHHHHHHHHcCCCCcceEE
Confidence 99988555443 31 2256777888889999999999996 333332 44433 224466
Q ss_pred ecC
Q 010153 470 ASG 472 (516)
Q Consensus 470 AsG 472 (516)
++|
T Consensus 145 G~~ 147 (312)
T 3hhp_A 145 GVT 147 (312)
T ss_dssp ECC
T ss_pred EEe
Confidence 666
No 218
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.93 E-value=2.8 Score=40.19 Aligned_cols=91 Identities=13% Similarity=0.194 Sum_probs=51.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
.||.|+|+|..|..+|..+... | .+++++|++ .++ .+..++. ......++.|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS----PEK---AEELAAL---GAERAATPCEVVES-- 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----GGG---GHHHHHT---TCEECSSHHHHHHH--
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC----HHH---HHHHHHC---CCeecCCHHHHHhc--
Confidence 5899999999999999998763 5 367777763 111 1111110 11123577888776
Q ss_pred CcEEEEccCCCCCCCHHHH---HHHHc-CCCCcEEEEcCC
Q 010153 412 PTILIGSSGVGRTFTKEVI---EAMAS-FNEKPLILALSN 447 (516)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv---~~Ma~-~~erPIIFaLSN 447 (516)
+|++| ++.....-.++++ +.+.+ ..+..+|.-+|+
T Consensus 58 aDvvi-~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 58 CPVTF-AMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp CSEEE-ECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred CCEEE-EEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence 77776 2222112334444 33322 234556666665
No 219
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=78.75 E-value=2.9 Score=39.80 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=49.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
.||.|+|+|..|..+|..+... |. +++++| + .++ .....+. ......++.|+++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~-~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 58 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT-I----GPV---ADELLSL---GAVNVETARQVTEF-- 58 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC-S----SCC---CHHHHTT---TCBCCSSHHHHHHT--
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc-C----HHH---HHHHHHc---CCcccCCHHHHHhc--
Confidence 4899999999999999988652 52 577776 3 111 2111111 11123567777764
Q ss_pred CcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCC
Q 010153 412 PTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSNP 448 (516)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSNP 448 (516)
+|++|=+...+ .-.++++. .+.+ ..+..+|+-+||-
T Consensus 59 ~D~vi~~vp~~-~~~~~v~~~~~~l~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 59 ADIIFIMVPDT-PQVEDVLFGEHGCAKTSLQGKTIVDMSSI 98 (295)
T ss_dssp CSEEEECCSSH-HHHHHHHHSTTSSTTSCCTTEEEEECSCC
T ss_pred CCEEEEECCCH-HHHHHHHhCchhHhhcCCCCCEEEECCCC
Confidence 77776332211 12344554 3322 2234566667765
No 220
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.74 E-value=2.5 Score=40.73 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=52.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav~~v 410 (516)
.||.|+|+|..|.++|..+... |. +++++|+. .++ ++ .++.. .....++.|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~----~~~---~~----~~~~~g~~~~~~~~~~~~~- 59 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV----QSA---VD----GLVAAGASAARSARDAVQG- 59 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS----HHH---HH----HHHHTTCEECSSHHHHHTT-
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC----HHH---HH----HHHHCCCeEcCCHHHHHhC-
Confidence 5899999999999999998763 53 67877763 111 11 11111 1123577787775
Q ss_pred CCcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSNP 448 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSNP 448 (516)
+|++|=+ .....-.++++. .+.+ ..+..+|..+|+-
T Consensus 60 -aDvvi~~-vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~ 99 (302)
T 2h78_A 60 -ADVVISM-LPASQHVEGLYLDDDGLLAHIAPGTLVLECSTI 99 (302)
T ss_dssp -CSEEEEC-CSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCC
T ss_pred -CCeEEEE-CCCHHHHHHHHcCchhHHhcCCCCcEEEECCCC
Confidence 7777632 211123344554 3332 2345577777653
No 221
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.63 E-value=3.1 Score=37.50 Aligned_cols=96 Identities=9% Similarity=0.144 Sum_probs=58.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
.||+|.|| |-.|..+++.|.+ .| .++++++++. ++.+.+.. ...+.. +.....++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 8888888877764 24 4788888852 11111211 111111 22222457788885
Q ss_pred cCCcEEEEccCCCC----------CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|=+.+... ..+..++++|.+..-+.+||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999997765431 12566888888776667888544
No 222
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=78.47 E-value=1.8 Score=39.16 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=58.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh-----chhhcc-ccCCCCCHH
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 404 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~-----k~~~A~-~~~~~~~L~ 404 (516)
.+|+|.|| |-.|..+++.|++. .| -++++++++. + ..+... +..+.. +.....++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 88888888888732 35 3688877741 1 012111 001111 111224577
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++++. +|++|=+.+..+.-++.+++.|.+..-+-||+.=|
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 88875 89999777654333788999998766667887543
No 223
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=78.44 E-value=1.3 Score=46.61 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=33.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 456789999999999999999999875 75 789999976
No 224
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=78.34 E-value=3.6 Score=40.22 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+-.||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34457999999999999999998763 53 67778873
No 225
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=77.87 E-value=1.7 Score=41.17 Aligned_cols=35 Identities=11% Similarity=0.328 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 34689999999999999998865 353 688999864
No 226
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.60 E-value=4.3 Score=42.68 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=59.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~~A-~~~~~~~~L~eav~~ 409 (516)
.||.|+|+|..|..+|..|... |. +++++|+. .++ +...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~----~~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VSK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----THH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988653 53 57788763 111 111111 000 000113578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010153 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (516)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (516)
+ ++|++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488877 44444446777887776533 356888888865
No 227
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=77.42 E-value=1.6 Score=48.39 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 13 ~kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 13 EAVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357889999999999999999999876 76 699999986
No 228
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.34 E-value=1.9 Score=41.30 Aligned_cols=92 Identities=15% Similarity=0.207 Sum_probs=52.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav~~v 410 (516)
.||.|+|+|..|..+|..+... |. +++++|+.. ++ .. .++.. .....++.|+++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~----~~---~~----~~~~~g~~~~~~~~~~~~~- 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLME----AN---VA----AVVAQGAQACENNQKVAAA- 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSSH----HH---HH----HHHTTTCEECSSHHHHHHH-
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCCH----HH---HH----HHHHCCCeecCCHHHHHhC-
Confidence 5899999999999999988642 53 577787631 11 11 11111 0112467777775
Q ss_pred CCcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSNPT 449 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSNPt 449 (516)
+|++|=+...+ .-.++++. .+.+ ..+..+|.-+||-.
T Consensus 61 -~D~vi~~vp~~-~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 61 -SDIIFTSLPNA-GIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp -CSEEEECCSSH-HHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred -CCEEEEECCCH-HHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 78777433211 23445553 2222 23456777777654
No 229
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.94 E-value=2 Score=41.33 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
-|+|+|||.||+..|..|.+. |+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~-----G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCC
Confidence 489999999999999988763 65 45666653
No 230
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=76.76 E-value=7 Score=37.70 Aligned_cols=104 Identities=14% Similarity=0.222 Sum_probs=59.5
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh-chhhcc-ccCCCCCHH
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 404 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~-k~~~A~-~~~~~~~L~ 404 (516)
.++..+|+|.|| |-.|..+++.|++. | .+++.+|++. ....+.+... +..+.. +.....++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLER-----G-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHC-----C-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999995 88888888887652 5 3688887742 1111112110 111111 111223577
Q ss_pred HHhcccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 405 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78877789999987765432 1345777776655567888543
No 231
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.57 E-value=2 Score=42.05 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=58.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc--hhhc-cccCCCCCHHHHhc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWA-HEHEPVNNLLDAVK 408 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k--~~~A-~~~~~~~~L~eav~ 408 (516)
.||.|+|||+-|..+|..|.++ | .++.++|+.-+ ..=+...+.... ..+. ++..-..++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999988653 4 36888887531 000000010000 0000 00001134544 55
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 010153 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (516)
.+|++| ++... ...+++++.++.. .+..+|..+.|--.
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 488887 55544 4567899998764 45678888999864
No 232
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.49 E-value=2.2 Score=39.56 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.||+..|..|.+. | .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----R-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CCEEEEeCC
Confidence 5899999999999999988653 5 368899974
No 233
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=76.47 E-value=1.2 Score=43.51 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=59.2
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc---hh---chhhcc-ccCC
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---HF---KKPWAH-EHEP 399 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~---~~---k~~~A~-~~~~ 399 (516)
+++..+|+|.|| |-.|..|++.|++. | .+++.++++.- .....+. .. ...+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~-----g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA-----H-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 345679999999 99999999888652 4 35887777520 0000010 00 000111 1112
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 010153 400 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 443 (516)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~-erPIIF 443 (516)
..+|.++++..++|++|=+.+..+. -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888986679999988775432 4678899988765 455554
No 234
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=76.36 E-value=1.5 Score=40.38 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=52.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh-chhhcc-ccCCCCCHHHH-hcc
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLLDA-VKV 409 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~-k~~~A~-~~~~~~~L~ea-v~~ 409 (516)
||+|+|+|..|..+|+.|... | .++.++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999988653 4 468888863 1110101100 001111 11111235554 44
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEEcCCC
Q 010153 410 IKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSNP 448 (516)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSNP 448 (516)
++|++|-++... .....+..+++ .+..+-|++.+|-
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 599999766543 22334444443 3566666776653
No 235
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=76.35 E-value=1.2 Score=38.47 Aligned_cols=32 Identities=16% Similarity=0.394 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----D-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 4799999999999999998652 5 368889884
No 236
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.28 E-value=5.3 Score=37.78 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988653 52 68888864
No 237
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=76.25 E-value=10 Score=39.05 Aligned_cols=111 Identities=13% Similarity=0.134 Sum_probs=63.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCC--C-CHHH
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--N-NLLD 405 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~--~-~L~e 405 (516)
++.+||+|+|.|-+|++.|+.+.+ .|. ++...|++-... .+..++ ..... + .-.+
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~---------~~~~l~-~G~~~~~g~~~~~ 60 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPP---------GLDKLP-EAVERHTGSLNDE 60 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCT---------TGGGSC-TTSCEEESSCCHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcc---------hhHHhh-CCCEEEECCCcHH
Confidence 567899999999999999876643 363 567788854211 111122 11111 1 1256
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCceeeCCEE
Q 010153 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKV 484 (516)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Grt 484 (516)
+++ .+|.+|=.++.+ .-.+++..+... ..|++ + | .|-++...+.+.|--||| ||||
T Consensus 61 ~~~--~~d~vV~s~gi~-~~~p~~~~a~~~--~~~v~---~------~--~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 61 WLM--AADLIVASPGIA-LAHPSLSAAADA--GIEIV---G------D--IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp HHH--TCSEEEECTTSC-TTCHHHHHHHHT--TCEEE---C------H--HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred Hhc--cCCEEEeCCCCC-CCCHHHHHHHHC--CCcEE---E------H--HHHHHHhcCCCEEEEECC-------CCHH
Confidence 676 488887555544 235666665432 23433 1 2 223333345678888997 7875
No 238
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=76.13 E-value=3.5 Score=39.55 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|.++|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998765 5 357777763
No 239
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=76.12 E-value=1.1 Score=45.49 Aligned_cols=121 Identities=17% Similarity=0.132 Sum_probs=74.3
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC---cccCCCccCCchhchhhccccCCCCCHHHHh
Q 010153 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (516)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G---Li~~~R~~~l~~~k~~~A~~~~~~~~L~eav 407 (516)
.||+|.| ||..|..+|-+|+. .|+--|+-.-.+.|+|.+. .+.-... +|.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999999988764 2441111111389999853 1111111 13322223333222225688889
Q ss_pred cccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCCCCCCCCHHHHhccc
Q 010153 408 KVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTWS 463 (516)
Q Consensus 408 ~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IFaLSNPt~~~Ectpe~A~~wt 463 (516)
++ .|++|=+.+.+ | ...+++++++.+++.+-+ |+-.|||. .+...-+++.+
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~~ 143 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKSA 143 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTC
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHHc
Confidence 87 99988554432 2 134678888888888774 88899995 66666666655
No 240
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=75.68 E-value=7.1 Score=37.97 Aligned_cols=93 Identities=19% Similarity=0.270 Sum_probs=55.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-----------ccc-CC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----------HEH-EP 399 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-----------~~~-~~ 399 (516)
.||.|+|+|..|..+|..+... | .+++++|++.= + ++..++... ... ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ----R---IKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----H---HHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH----H---HHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999988652 4 35788887410 0 111111100 000 01
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 010153 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 447 (516)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 447 (516)
..++.++++. +|++|=+.. . ...+++++.+++. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2578888875 898774333 2 2458888888654 33556666644
No 241
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=75.59 E-value=2.5 Score=41.61 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=28.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+.+..+|+|+|||.||+..|..|.+. |+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQN-----GW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecCCC
Confidence 34567999999999999999988653 53 6788887543
No 242
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=75.47 E-value=2.4 Score=40.48 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 25 3688999864
No 243
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=75.20 E-value=6.1 Score=38.00 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=58.0
Q ss_pred CCCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHH
Q 010153 326 GGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (516)
Q Consensus 326 g~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ 404 (516)
.++++..+|+|.|| |-.|..+++.|++. | -+++.+|+.. .. ..... +.-+.....++.
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~ 72 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQ-----G-------RTVRGFDLRP----SG-TGGEE----VVGSLEDGQALS 72 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHT-----T-------CCEEEEESSC----CS-SCCSE----EESCTTCHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCC----CC-CCccE----EecCcCCHHHHH
Confidence 34677889999998 89999999888653 5 3577777642 11 11111 111212224577
Q ss_pred HHhcccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 010153 405 DAVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 446 (516)
++++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 73 ~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 73 DAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8887 499999877654211 345788888776678998555
No 244
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=75.19 E-value=2.4 Score=42.47 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
++|||+|||.||+..|..|.+. |.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-----KYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-----CcC-----CCEEEEeCCC
Confidence 5899999999999999998653 542 3799999865
No 245
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=75.11 E-value=7.2 Score=39.55 Aligned_cols=91 Identities=22% Similarity=0.351 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh
Q 010153 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (516)
Q Consensus 311 aaV~LAgll~Al~~~g~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (516)
.-+|-.|++--|+..+.+|+..++|++|.+ -.|.-+|.||... |. .+.+|.|+
T Consensus 159 ~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~-----~A-------TVTi~Hs~-------------- 212 (303)
T 4b4u_A 159 GSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQA-----NA-------TVTICHSR-------------- 212 (303)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred cCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhc-----CC-------EEEEecCC--------------
Confidence 356778999999999999999999999975 4678888777542 43 34555432
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 010153 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (516)
Q Consensus 390 k~~~A~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (516)
..+|.+.++. +|++|...+.++.++.|+|| +.-+|.=.
T Consensus 213 ----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDV 250 (303)
T 4b4u_A 213 ----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDA 250 (303)
T ss_dssp ----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEEC
T ss_pred ----------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEe
Confidence 1368888886 99999999999999999996 44466543
No 246
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.09 E-value=2.5 Score=39.56 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+|+|+|||.||+..|..+.+. |. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46999999999999999988653 53 58999997
No 247
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=75.05 E-value=2 Score=41.13 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----G-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 4899999999999999988652 4 257888763
No 248
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.02 E-value=2.2 Score=43.45 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+||||+|||.||+..|..|.+. +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998653 21 1368888875
No 249
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=74.99 E-value=5.4 Score=38.42 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=60.8
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCc---cCCchhchhhcc-ccCCCC
Q 010153 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 401 (516)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~---~~l~~~k~~~A~-~~~~~~ 401 (516)
++++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .... ..+. +..+.. +.....
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 8888888887754 24 3688888731 1100 0110 111111 111223
Q ss_pred CHHHHhcccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++.++++.+++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57777875579999988775432 0345667776655567888544
No 250
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=74.98 E-value=7.6 Score=37.77 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=25.6
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+| +|..|..+|..+... |. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-----G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-----GY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-----TC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4899999 999999999988642 53 57888753
No 251
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.91 E-value=2.6 Score=39.76 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3689999999999999988765 253 68899886
No 252
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=74.62 E-value=4.8 Score=40.19 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=29.7
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 319 l~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
+.|+.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333444467899999999888877665533 263 57888875
No 253
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=74.37 E-value=2.7 Score=42.19 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=29.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
...+|||+|||.||+..|..|.+. |.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCC
Confidence 357899999999999999998653 542 36888888643
No 254
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.10 E-value=3.9 Score=39.69 Aligned_cols=91 Identities=12% Similarity=0.212 Sum_probs=49.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
..||.|+|+|..|.++|..+... |. +++++|++ .++ .+..++. ......++.|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~-- 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR----IEA---MTPLAEA---GATLADSVADVAA-- 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS----TTT---SHHHHHT---TCEECSSHHHHTT--
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HHHHHHC---CCEEcCCHHHHHh--
Confidence 35899999999999999988653 53 57777863 221 2211111 0111246666665
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 010153 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 447 (516)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 447 (516)
+|++|= +.....-.+++++.+.+. .+.-||.-.|+
T Consensus 71 -aDvvi~-~vp~~~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 71 -ADLIHI-TVLDDAQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp -SSEEEE-CCSSHHHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred -CCEEEE-ECCChHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 666652 222122344555555442 23445555554
No 255
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=73.65 E-value=2.3 Score=40.17 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999998663 53 57888873
No 256
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=73.55 E-value=9.7 Score=34.54 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=59.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~ea 406 (516)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+...+..+.. +-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 45678999996 77888888887663 52 13788888752 111111111111111 11122456677
Q ss_pred hcccCCcEEEEccCCCC-------------CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 407 VKVIKPTILIGSSGVGR-------------TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g-------------~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++ ++|++|=+.+... .-+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 4999998876531 02456777887665567888544
No 257
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=73.42 E-value=6.2 Score=36.99 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.4
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 010153 333 RFLFLGAGEAGTGIAELIAL 352 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~ 352 (516)
||.|+|+|..|..+|..|..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 79999999999999999865
No 258
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=73.33 E-value=2.7 Score=42.80 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=30.7
Q ss_pred HhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 324 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 324 ~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 344445567999999999999999988653 5 35677776543
No 259
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=73.20 E-value=2.7 Score=40.88 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=27.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
++-.|+|+|||.||+..|-.|.+. |+ ++.++|++-
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~-----G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 346899999999999999988663 53 577777764
No 260
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=72.96 E-value=3.3 Score=39.14 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=47.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKP 412 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkp 412 (516)
||.|+|+|..|..+|..+.. |. +++++|+.. .+ ... ++...-...++.|+++. +
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~~----~~---~~~----~~~~g~~~~~~~~~~~~--~ 56 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRTF----EK---ALR----HQEEFGSEAVPLERVAE--A 56 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSST----HH---HHH----HHHHHCCEECCGGGGGG--C
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCCH----HH---HHH----HHHCCCcccCHHHHHhC--C
Confidence 79999999999999988742 42 477777631 11 111 11110000114455554 6
Q ss_pred cEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010153 413 TILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (516)
Q Consensus 413 tvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (516)
|++|=+.. ...-.+++++.+.+. .+..+|+-+||..
T Consensus 57 D~vi~~v~-~~~~~~~v~~~l~~~l~~~~~vv~~s~~~ 93 (289)
T 2cvz_A 57 RVIFTCLP-TTREVYEVAEALYPYLREGTYWVDATSGE 93 (289)
T ss_dssp SEEEECCS-SHHHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred CEEEEeCC-ChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 77663332 212244555555432 2345666667643
No 261
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=72.82 E-value=3.1 Score=41.53 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876221 13 4688888764
No 262
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=72.81 E-value=2.9 Score=39.93 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+|+|+|||.||+..|..+.+. | .++.++|++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-----Q-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-----C-------CcEEEEeCC
Confidence 46899999999999999887652 5 368899987
No 263
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=72.71 E-value=2 Score=45.31 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=50.5
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHH
Q 010153 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLL 404 (516)
Q Consensus 326 g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~ 404 (516)
...|...|++|+|.+.-..++++.|.+ .|+.. +.+.-.. ..+.+... +...- ..+...++
T Consensus 308 ~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le 368 (458)
T 3pdi_B 308 HFMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVPA------RAAALVDS--PLPSVRVGDLEDLE 368 (458)
T ss_dssp HHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEESS------CCSCCTTT--TSSCEEESHHHHHH
T ss_pred HHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEECC------CChhhhhC--ccCcEEeCCHHHHH
Confidence 346788999999999999999998843 48632 2222111 11111110 00000 01112477
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 010153 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (516)
+.++..+||++||-|- .+.+.+.+ .-|.+
T Consensus 369 ~~i~~~~pDllig~~~-----~~~~a~k~----gip~~ 397 (458)
T 3pdi_B 369 HAARAGQAQLVIGNSH-----ALASARRL----GVPLL 397 (458)
T ss_dssp HHHHHHTCSEEEECTT-----HHHHHHHT----TCCEE
T ss_pred HHHHhcCCCEEEEChh-----HHHHHHHc----CCCEE
Confidence 7888899999999654 23444444 46765
No 264
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=72.69 E-value=3.1 Score=41.15 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+.+|+|+|||.||+..|..|.+. |+ ++.++|+..-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-----GH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCCC
Confidence 46899999999999999988653 64 5778887543
No 265
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=72.66 E-value=2.3 Score=41.93 Aligned_cols=99 Identities=18% Similarity=0.262 Sum_probs=55.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC----------CcccCCCccCCchhchhhcccc
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK----------GLIVSSRKDSLQHFKKPWAHEH 397 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~----------GLi~~~R~~~l~~~k~~~A~~~ 397 (516)
.....||.|+|||+-|..+|..|.+. |. ++.++ ++ |+..... ..+ +....
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~~~i~~~g~~~~~~-----~~~--~~~~~ 75 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHVQAIEATGLRLETQ-----SFD--EQVKV 75 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHHHHHHHHCEEEECS-----SCE--EEECC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHHHHHHhCCeEEEcC-----CCc--EEEee
Confidence 35568999999999999999998763 42 45544 32 1111100 000 00000
Q ss_pred CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCCC
Q 010153 398 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTSQ 451 (516)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~~ 451 (516)
....++.+ ++ .+|++| ++... ...+++++.++.. .+..+|..++|.-..
T Consensus 76 ~~~~~~~~-~~--~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 76 SASSDPSA-VQ--GADLVL-FCVKS-TDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp EEESCGGG-GT--TCSEEE-ECCCG-GGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred eeeCCHHH-cC--CCCEEE-EEccc-ccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 00134443 44 488877 44433 3678999998764 345688889998753
No 266
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=72.62 E-value=3.1 Score=41.36 Aligned_cols=31 Identities=39% Similarity=0.580 Sum_probs=26.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
..+|.|+|+|..|.+||..++ + |. +++++|+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~ 42 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDV 42 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECS
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEEC
Confidence 468999999999999999987 6 53 5777776
No 267
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=72.59 E-value=3.2 Score=41.17 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=27.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+..+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 4457899999999999999988763 64 577777753
No 268
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=72.56 E-value=3.6 Score=40.85 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=26.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
...+|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-----GV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEecC
Confidence 457899999999999999988763 54 46667664
No 269
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=72.42 E-value=4.3 Score=40.11 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4689999999999999988755 364 6888998743
No 270
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=72.14 E-value=3.5 Score=41.47 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=29.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
..+++..|||+|||.+|+.+|..|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 335677999999999999999998764 3 147889998
No 271
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=71.97 E-value=3.5 Score=39.36 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999998866 263 68899987
No 272
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=71.87 E-value=3.6 Score=35.93 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
-+++|+|+|.+|+..|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888653 4 468888875
No 273
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=71.81 E-value=3.2 Score=41.28 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999998865 353 678888753
No 274
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=71.77 E-value=7.4 Score=36.97 Aligned_cols=101 Identities=15% Similarity=0.235 Sum_probs=57.7
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCcc--CCchh----chhhcc-ccCCCC
Q 010153 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 401 (516)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~--~l~~~----k~~~A~-~~~~~~ 401 (516)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++. ...+ .+... +..+.. +.....
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 8888888888765 25 3688887642 1100 00000 011111 111123
Q ss_pred CHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCC-CcEEEEcC
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNE-KPLILALS 446 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~e-rPIIFaLS 446 (516)
++.++++.+++|++|=+.+.... -|..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888789999988775421 03345555554443 67888644
No 275
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=71.73 E-value=12 Score=40.02 Aligned_cols=120 Identities=19% Similarity=0.125 Sum_probs=72.1
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010153 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (516)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (516)
..+.|.|---- .+|=-++|-+++..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 35666664332 3444578888877653 2567899999999999999999998754
Q ss_pred hcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 010153 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (516)
.|+ +++.+|+.- .+ ...+ ...-...++.|+++. +|+++=.. ...++++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~----~~a~----~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP----ARAA----QLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH----HHHH----HHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch----hHHH----hcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 253 688888642 11 0000 000011267777775 77766432 2234666666655
Q ss_pred HHcCCCCcEEEEcC
Q 010153 433 MASFNEKPLILALS 446 (516)
Q Consensus 433 Ma~~~erPIIFaLS 446 (516)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 54 455666666
No 276
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=71.58 E-value=3.5 Score=41.67 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=28.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
+.-||||+|||.||+..|+.|. . .| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~----~-~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL----G-KC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT----T-TC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh----C-CC-------CEEEEEECCCCC
Confidence 3468999999999999999981 1 22 479999886543
No 277
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=71.27 E-value=11 Score=35.84 Aligned_cols=93 Identities=12% Similarity=0.203 Sum_probs=58.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
.||+|.|| |-.|..+++.|++. | .+++.+++. .+... +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 89999998888653 4 368888875 22211 22 111111 222 345777787
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988775432 1467888888766666888543
No 278
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=71.17 E-value=3.7 Score=39.88 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=28.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+..|+|+|||.+|+.+|..|.+. | .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~-----G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKE-----N-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEeCCCC
Confidence 46899999999999999998763 5 36899998643
No 279
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=73.82 E-value=0.84 Score=42.50 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=52.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~ 408 (516)
+.+.||.|+|+|..|..+|+.+... | .+++++|+.-- . +.+ +...-...++.++++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 5567899999999999999988653 4 24666665311 1 111 111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010153 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (516)
. +|++| ++..+. -++++++ ++...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 77666 333332 3455552 33223456888888876
No 280
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=70.94 E-value=3.8 Score=41.30 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=29.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
.+|||+|||.||+..|..|.+. |. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-----g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-----GF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-----Cc-----CCeEEEEECCCCC
Confidence 4899999999999999988653 54 2468899886543
No 281
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=70.80 E-value=3.9 Score=40.64 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=25.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|+|+|||.||+..|..|.+. |. ++.+++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecC
Confidence 699999999999999998764 53 57777764
No 282
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=70.79 E-value=16 Score=35.56 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=61.5
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch-hchhhcc-ccC-CCCCH
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 403 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~-~k~~~A~-~~~-~~~~L 403 (516)
+++..||+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999996 99999999888763 13 3688888742 11111111 1111221 111 22357
Q ss_pred HHHhcccCCcEEEEccCCCC----------------CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 404 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.+++++ +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778885 999997665432 23467888888777 78998655
No 283
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=70.69 E-value=3.9 Score=40.77 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=26.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..|.+. |+ +++.++|+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-----G~------~~v~v~E~~ 37 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-----GI------GKVTLLESS 37 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECC
Confidence 46899999999999999988663 64 226677664
No 284
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=70.44 E-value=3.6 Score=38.48 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=20.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 010153 331 EHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
..+|||+|||.||+..|..+.+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~ 26 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG 26 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHC
Confidence 35899999999999999988763
No 285
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=70.44 E-value=3.7 Score=39.03 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-----GF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 46899999999999999888653 53 58889874
No 286
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=70.33 E-value=2.3 Score=45.81 Aligned_cols=39 Identities=18% Similarity=0.289 Sum_probs=33.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+=
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~ 66 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQ 66 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCB
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCE
Confidence 467899999999999999999999875 76 7999999763
No 287
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=70.28 E-value=3.9 Score=39.69 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 5689999999999999988754 25 3688999864
No 288
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=70.25 E-value=3.6 Score=39.17 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|+|+|||.+|+..|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-----G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 4799999999999999998763 64 577888763
No 289
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=70.10 E-value=4.6 Score=32.36 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=51.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch---hhcc-ccCCCCCHHH
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLD 405 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~---~~A~-~~~~~~~L~e 405 (516)
...+|+|+|+|..|..+++.+.. .|. .+++++|++. .+ +...+. .+.. +.....++.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~ 65 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAK 65 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHH
Confidence 34689999999999999988865 241 4688888741 11 111110 1110 1111135667
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcC
Q 010153 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASF 436 (516)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~ 436 (516)
+++. +|++|=+.+ ..++..+++.+.+.
T Consensus 66 ~~~~--~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 66 ALGG--FDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp HTTT--CSEEEECSC--GGGHHHHHHHHHHT
T ss_pred HHcC--CCEEEECCC--chhhHHHHHHHHHh
Confidence 7764 999996663 35677888877653
No 290
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=69.93 E-value=6.3 Score=36.65 Aligned_cols=93 Identities=14% Similarity=0.193 Sum_probs=56.0
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ea 406 (516)
.++..||+|.|| |-.|..+++.|.+. |.. ...+.- .+...+ -+.....++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~-----g~~---~~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADG-----AGL---PGEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTT-----TCC---TTCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhc-----CCc---cccccc--------------ccCcee----cccCCHHHHHHH
Confidence 366789999996 88899998887653 430 000000 000000 011112357888
Q ss_pred hcccCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 407 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888899999988776431 1234688887766667888544
No 291
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=69.86 E-value=16 Score=38.47 Aligned_cols=40 Identities=20% Similarity=0.251 Sum_probs=26.4
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 323 ~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+..++...-.||.|+|+|..|.++|..+.+ | .+++++|.+
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~------G-------~~V~~~D~~ 67 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ------N-------HEVVALDIV 67 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT------T-------SEEEEECSC
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc------C-------CeEEEEecC
Confidence 556667777899999999999999987642 4 357777764
No 292
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=69.69 E-value=4 Score=38.47 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.||+..|..+.+. |. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-----GV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-----CC------CcEEEEcCC
Confidence 3799999999999999988652 53 278899985
No 293
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=69.46 E-value=4.7 Score=39.43 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=28.9
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~-~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.+|+.+|-.|.+ . | ..++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-----G------~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-----G------ITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----C------CCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-----C------CCcEEEEeCCC
Confidence 5689999999999999999876 3 4 14689999875
No 294
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=69.34 E-value=3.9 Score=39.88 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.+|+.+|..|.+. |. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-----G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-----GE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 46899999999999999998763 53 589999874
No 295
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=69.18 E-value=3.6 Score=42.20 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888653 42 23688998754
No 296
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=69.04 E-value=3.6 Score=38.59 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC
Confidence 489999999999999887743 23 467888763
No 297
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=69.02 E-value=4.2 Score=39.56 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
..|+|+|||.+|+.+|-.|.+. | .++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----G-------VKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCCCC
Confidence 5799999999999999988763 5 368899987543
No 298
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=68.98 E-value=5.8 Score=39.46 Aligned_cols=40 Identities=25% Similarity=0.364 Sum_probs=25.6
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010153 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
...++..|||++||..+.. .+ .....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~-s~---p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV-TG---PGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST-HH---HHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc-hH---HHHHHHHHcCCCEEEEecc
Confidence 4567888999999987643 11 1222244457899875555
No 299
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=68.76 E-value=3 Score=39.40 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=26.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
...+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-----NL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-----TC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEccC
Confidence 456899999999999999988652 53 46777753
No 300
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=68.73 E-value=3.9 Score=41.92 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..+|||+|||.||+..|..|.+.. .| .+|.++|++.-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 468999999999999999986641 12 47888888654
No 301
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=68.36 E-value=5.2 Score=40.39 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=30.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999998764 53 1368899987644
No 302
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=68.32 E-value=4.8 Score=39.59 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988764 64 577787654
No 303
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=68.19 E-value=5.5 Score=37.35 Aligned_cols=86 Identities=10% Similarity=0.230 Sum_probs=54.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
||+|.|| |-.|..+++.|. . | .+++.+|++.-... -+.....++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~--------------~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC--------------GDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC--------------CCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc--------------ccCCCHHHHHHHHHhcC
Confidence 7999998 888888888775 2 3 36788876531110 01111135778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 412 ptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988775431 14567777765444 5888544
No 304
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=68.01 E-value=1.9 Score=44.83 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHH
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
....+|+|+|||.||+..|..|.++
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998764
No 305
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=68.00 E-value=4.5 Score=41.32 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-----G-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46899999999999999887652 5 379999986
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=67.82 E-value=14 Score=32.94 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.++..+.+++....--.+++++|.| +|..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 4444455554444444678999999 588888888776542 5 257777763
No 307
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.82 E-value=4.5 Score=39.18 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
..|+|+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999988753 53 68899987543
No 308
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=67.68 E-value=14 Score=34.95 Aligned_cols=95 Identities=13% Similarity=0.200 Sum_probs=54.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
+|+|.|| |-.|..+++.|++. | .++.+++.. ..+...+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~-----g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSES-----N--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT-----S--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHhC-----C--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 78888888777542 3 334444321 11111111111111112233 67888888 4
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 412 ptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|-+.+.... -|..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1234778887766678998655
No 309
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=67.65 E-value=4.3 Score=41.22 Aligned_cols=37 Identities=24% Similarity=0.428 Sum_probs=29.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 35689999999999999998865 3531 3788999863
No 310
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=67.63 E-value=4.5 Score=40.48 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=29.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
+..|||+|||.||+.+|-.|.+. |. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-----G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-----GY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-----CC------CcEEEEeCCCCC
Confidence 45799999999999999888663 64 378899987553
No 311
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=67.51 E-value=7.5 Score=36.92 Aligned_cols=78 Identities=14% Similarity=0.149 Sum_probs=43.9
Q ss_pred CcccceEEEeCcc-h--HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc------ccC
Q 010153 328 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 398 (516)
Q Consensus 328 ~L~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~------~~~ 398 (516)
.+++.++||.||. . .|.++|+.+++ .| -+++++|++- . .+.+...++.+.+ +..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~----~-~~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQ----F-KDRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTT----C-HHHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCch----H-HHHHHHHHHhcCCceEEEeecC
Confidence 4778899999983 4 66667777654 35 3688888864 0 0111111111111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 010153 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (516)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (516)
...++.++++.+ ++|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 112455555554 789999777654
No 312
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=67.49 E-value=4.8 Score=39.62 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=29.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
+..|||+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-----G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-----GH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCCC
Confidence 35799999999999999988763 63 58899987654
No 313
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=67.47 E-value=7.5 Score=36.41 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=57.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~v 410 (516)
||+|.|| |-.|..+++.|.+. .| .++..++++. ++...+......+.. +-.+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88999998886441 13 3577776642 111111111111111 11222468888886
Q ss_pred CCcEEEEccCCCC------CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 411 KPTILIGSSGVGR------TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 411 kptvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.|++|=+++... .-++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 899998776532 12467888888776677888533
No 314
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=67.21 E-value=5 Score=33.94 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=26.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+..+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-----g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-----G-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEECC
Confidence 346899999999999999988653 5 368888873
No 315
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=67.14 E-value=6.7 Score=42.32 Aligned_cols=37 Identities=11% Similarity=0.273 Sum_probs=30.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+++.+|||+|||.||+..|-.|.+. |+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-----G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-----GH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-----CC-------CEEEEcCCCC
Confidence 5678999999999999999888653 53 6889998843
No 316
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=67.03 E-value=3.6 Score=39.16 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
...+|+|+|||.||+..|..|.+. |. ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 456899999999999999988653 53 5778887
No 317
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=66.94 E-value=5.6 Score=38.71 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999998854 25 4789999764
No 318
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=66.78 E-value=5.2 Score=41.58 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=28.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
...+|+|+|+|.||+..|..|.+. |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 457899999999999999998764 53 588888753
No 319
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=66.77 E-value=6.9 Score=37.08 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=55.1
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~ 409 (516)
..||+|.|| |-.|..+++.|++ .|. +++.+++. ...| +. ...++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 8888888887754 242 46666543 1111 21 11357777876
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988775531 2345677776655567888544
No 320
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=66.70 E-value=7.9 Score=38.60 Aligned_cols=88 Identities=11% Similarity=0.116 Sum_probs=52.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHh
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~~~~~L~eav 407 (516)
|+..||.|+|+|..|.++|..+... |. +++++|++. .+ .. ..++. .-...++.+++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~----~~--~~-----~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG----SA--TV-----AKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT----CH--HH-----HHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh----HH--HH-----HHHHHCCCEEccHHHHH
Confidence 4456899999999999999988653 53 477777642 11 00 11111 00112788888
Q ss_pred cccCCcEEEEccCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 010153 408 KVIKPTILIGSSGVGRTFTKEVIE-AMASFN-EKPLIL 443 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~-~Ma~~~-erPIIF 443 (516)
+. +|++| ++..... .+++++ .+..+- +..+|.
T Consensus 71 ~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 85 89887 4444433 377887 765432 344444
No 321
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=66.67 E-value=18 Score=36.83 Aligned_cols=136 Identities=7% Similarity=0.013 Sum_probs=85.9
Q ss_pred HHHHHHHHHhhCCCeeeEeeeCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhC------CCcccceE
Q 010153 263 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRF 334 (516)
Q Consensus 263 defv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Al~~~g------~~L~d~ri 334 (516)
...++ +-.+| .++ |-+-.++ +.+.+.+.+|- ++||.| || +-=-.=+||=++.-.+..| +++++.||
T Consensus 91 ~DTar-vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~v 164 (328)
T 3grf_A 91 QDTAE-VFSRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKF 164 (328)
T ss_dssp HHHHH-HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCE
T ss_pred HHHHH-HHHhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEE
Confidence 33444 33456 443 4455554 45556666764 689998 55 4444556777777777766 47999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc---c---CCCCCHHHHhc
Q 010153 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVK 408 (516)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~---~---~~~~~L~eav~ 408 (516)
+++|-+. + .+|+-++.++.+ .|+ ++.++-.+|+..+-..+ +-..-+.++.. . ....++.|||+
T Consensus 165 a~vGD~~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~~-~~~~~~~~~~~~~~g~~v~~~~d~~eav~ 233 (328)
T 3grf_A 165 AYCGDSM-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIKE-VIDECEEIIAKHGTGGSIKIFHDCKKGCE 233 (328)
T ss_dssp EEESCCS-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCHH-HHHHHHHHHHHHTCCCEEEEESSHHHHHT
T ss_pred EEeCCCC-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCHH-HHHHHHHHHhhccCCCeEEEEcCHHHHhc
Confidence 9999985 2 578888887766 474 68888888885321111 21122233322 1 12368999999
Q ss_pred ccCCcEEEE
Q 010153 409 VIKPTILIG 417 (516)
Q Consensus 409 ~vkptvLIG 417 (516)
+ +||+.-
T Consensus 234 ~--aDvvyt 240 (328)
T 3grf_A 234 G--VDVVYT 240 (328)
T ss_dssp T--CSEEEE
T ss_pred C--CCEEEe
Confidence 8 999973
No 322
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=66.66 E-value=3.5 Score=40.07 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 5899999999999999998763 53 57777864
No 323
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=66.57 E-value=5.6 Score=39.33 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=25.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCC
Confidence 699999999999999998763 5 357777765
No 324
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=66.53 E-value=4.7 Score=41.63 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|+|+|||.||+..|..+.+.. +.|++ ..++.++|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcCC
Confidence 48999999999999999987632 13542 01388998863
No 325
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=66.22 E-value=4.4 Score=41.81 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=29.0
Q ss_pred ccCCcchHHHHHHHHHHHHHH---hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 304 NDDIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 304 nDDiQGTaaV~LAgll~Al~~---~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
|...||-|+.+.---+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|++...
T Consensus 6 ~~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 6 HHHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 344567776655444432211 111222358999999999999999986631 12 478999987543
No 326
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=66.14 E-value=7.8 Score=35.57 Aligned_cols=101 Identities=20% Similarity=0.151 Sum_probs=58.7
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~ea 406 (516)
..-.+|+|.|| |-.|..+++.|++ .| .-++.+++++. ++...+...+..+.. +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G------~~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQ------TIKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CT------TEEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CC------CceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 7788888877754 24 13677777642 111111111111111 11222457788
Q ss_pred hcccCCcEEEEccCCCCC--CCHHHHHHHHcCCCCcEEEEcC
Q 010153 407 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++. .|++|=..+.... -++.++++|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966554322 2577899998766667888555
No 327
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=66.00 E-value=4.5 Score=40.89 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=29.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..+|||+|||.||+..|..|.+..... + +-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 357999999999999999997752110 0 046888988753
No 328
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=65.89 E-value=13 Score=35.21 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=42.2
Q ss_pred hCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCH
Q 010153 325 IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNL 403 (516)
Q Consensus 325 ~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L 403 (516)
...+++++++||-||+. .|.++|+.+++ .| -+++++|++.- .+......+.-+.....++
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~-----~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v 68 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVR-----YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEV 68 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHH-----TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHH
Confidence 34578899999999854 34445555543 36 36888876421 1111111111122222345
Q ss_pred HHHhccc-----CCcEEEEccCCC
Q 010153 404 LDAVKVI-----KPTILIGSSGVG 422 (516)
Q Consensus 404 ~eav~~v-----kptvLIG~S~~~ 422 (516)
.++++.+ ++|+||=..+..
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 69 KEAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcC
Confidence 5555544 799999766643
No 329
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=65.76 E-value=4.7 Score=41.42 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
++.++||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~-----g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQL-----G-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 357899999999999999988552 4 3789999864
No 330
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=65.58 E-value=5 Score=41.39 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+.+|+|+|||.||+..|..+.+. | .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-----G-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988653 5 3688999754
No 331
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=65.47 E-value=13 Score=35.37 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=57.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
.+|+|.|| |-.|..+++.|++. | .+++.+|+.- ....+.+.. +..+.. +.....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDE-----G-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37999986 88888888887652 5 3677777631 110011211 111111 11122357777775
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345677776655567888544
No 332
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=65.34 E-value=30 Score=35.46 Aligned_cols=130 Identities=18% Similarity=0.228 Sum_probs=80.7
Q ss_pred HHhhCCCeeeEeeeCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHH
Q 010153 270 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 347 (516)
Q Consensus 270 ~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA 347 (516)
-.+| .++++ +--++ +.+.+.+.+|- ++||.| || .-=-.=+||=++.-.+..| +|++.||+++|-+. -+|
T Consensus 122 Ls~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~---nva 192 (340)
T 4ep1_A 122 LSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN---NVC 192 (340)
T ss_dssp HHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC---HHH
T ss_pred HHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc---hhH
Confidence 3445 55443 55553 35556666664 689998 44 2333456677766666665 59999999999982 378
Q ss_pred HHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-cC---CCCCHHHHhcccCCcEEEEccCC
Q 010153 348 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HE---PVNNLLDAVKVIKPTILIGSSGV 421 (516)
Q Consensus 348 ~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~~---~~~~L~eav~~vkptvLIG~S~~ 421 (516)
+-++.++.+ .|+ ++.++-.+|+.-.. + +-..-+.+|+. .. ...++.|||++ +||+.-..=+
T Consensus 193 ~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 193 HSLLLASAK-VGM-------HMTVATPVGYRPNE--E-IVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHH-cCC-------EEEEECCcccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 888787766 474 68888887774321 1 11111223332 11 12689999998 9999876543
No 333
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=65.33 E-value=5.1 Score=38.04 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
=-|+|+|||+||+..|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 357999999999999977755 35 367888864
No 334
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=65.21 E-value=19 Score=31.76 Aligned_cols=91 Identities=11% Similarity=0.170 Sum_probs=54.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchh--chhhcc-ccCCCCCHHHHhc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 408 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~--k~~~A~-~~~~~~~L~eav~ 408 (516)
||+|.|| |-.|..+++.|++. | .+++.++++. + .+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~R~~----~---~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-----G-------HEVTAIVRNA----G---KITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESCS----H---HHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHhC-----C-------CEEEEEEcCc----h---hhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 88898888888652 5 3678887741 1 11110 011111 1111112 6776
Q ss_pred ccCCcEEEEccCCCCC-------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 409 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~-------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
. +|++|=+.+.... .++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999987765421 2367888888765567787644
No 335
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=65.18 E-value=5.2 Score=41.13 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 468999986
No 336
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=65.10 E-value=5.2 Score=46.51 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
++|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 468899999999999999999999886 75 799999986
No 337
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=65.04 E-value=11 Score=37.01 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=58.7
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCc-hhchhhcc-ccCCCCCHH
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~~A~-~~~~~~~L~ 404 (516)
+++..+|+|.|| |-.|..+++.|++. | ..+++.+|+.. ......+. ..+..+.. +.....++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLEL-----G------VNQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT-----T------CSEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHc-----C------CceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 466779999997 88888888887652 4 14688887642 11001121 00111111 111112466
Q ss_pred HHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcC-CCCcEEEEcC
Q 010153 405 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 446 (516)
Q Consensus 405 eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 446 (516)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 59999988775421 145567777665 4567887544
No 338
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=65.03 E-value=6.1 Score=39.37 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=25.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|+|+|||.+|+..|-.|.+. | .++.++++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 799999999999999998763 5 357777765
No 339
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=64.89 E-value=6.1 Score=42.03 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 353 588999864
No 340
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.81 E-value=5.9 Score=40.33 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 45799999999999999888663 5 368899986
No 341
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=64.66 E-value=3 Score=39.49 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=58.3
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCc--cCCchhchhhcc-ccCCCCCHHHH
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 406 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~--~~l~~~k~~~A~-~~~~~~~L~ea 406 (516)
..+|+|.|| |-.|..+++.|++. | ..++..++++. ++. ..+......+.. +-....++.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88999999888763 3 13677777641 110 001110111111 11222467888
Q ss_pred hcccCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEEcCC
Q 010153 407 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 447 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 447 (516)
+++ +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 886 8999987653211 3556778887665567888 664
No 342
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=64.53 E-value=5.7 Score=37.39 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=57.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|++. .... +.+ +..+.. +.....++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 889999998886530 12 3677777641 1100 100 111111 11122357788886
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHcCCCCcEEEE
Q 010153 410 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILA 444 (516)
Q Consensus 410 vkptvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFa 444 (516)
.++|++|=+.+.... -|..+++++.+..-+.+||.
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 116 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP 116 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECC
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 679999988775321 13356777776555678874
No 343
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=64.49 E-value=2.9 Score=44.03 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||||+|+|.||+..|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999999877632 12 379999985
No 344
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=64.41 E-value=5.9 Score=40.16 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|||+|||.||+..|..|.+.+.. | -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999999774311 2 3677777754
No 345
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=64.30 E-value=5.5 Score=40.51 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..+|||+|||.||+..|..|.+. +- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999988664 21 147888888653
No 346
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=64.28 E-value=5.3 Score=41.17 Aligned_cols=34 Identities=29% Similarity=0.399 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-----G-------AKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----S-------CCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 457899999999999999988652 5 468999986
No 347
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=64.22 E-value=5.8 Score=40.06 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|||+|||.||+..|..|.+. . .| .++.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999998762 0 12 4788888764
No 348
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=64.11 E-value=5.2 Score=41.11 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+.+|+|+|||.||+..|..+.+. | .++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-----G-------~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-----G-------RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEeCCCC
Confidence 46899999999999999887653 5 36889988654
No 349
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=63.99 E-value=7.3 Score=40.61 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
.||||+|||.||+..|..|.+. |- ..+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988664 21 2478899887543
No 350
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=63.95 E-value=6.2 Score=41.27 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.||.|+|+|..|..+|..+.+. | .+++++|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999998763 5 367888874
No 351
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=63.93 E-value=3.6 Score=45.77 Aligned_cols=37 Identities=27% Similarity=0.462 Sum_probs=32.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 3789999999999999999998764 76 7999999863
No 352
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=63.88 E-value=5.7 Score=42.31 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 353 688999864
No 353
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=63.81 E-value=6.4 Score=38.72 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhh
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW 393 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~ 393 (516)
.++..+.|++..+ - ..++|+|.|||..|..++.++.. .|. ++++.+|+. ..+ ++..++.=
T Consensus 153 ~~~ta~~~l~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~~G 212 (348)
T 2d8a_A 153 PLGNAVDTVLAGP-I-SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS----DFR---RELAKKVG 212 (348)
T ss_dssp HHHHHHHHHTTSC-C-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HHHHHHHT
T ss_pred HHHHHHHHHHhcC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHhC
Confidence 4444456664333 3 88999999999888888766543 363 468877753 111 11111100
Q ss_pred ccc--cCCCCCHHHHhcc----cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH-HHHhcccCCc
Q 010153 394 AHE--HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTA-EEAYTWSKGR 466 (516)
Q Consensus 394 A~~--~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectp-e~A~~wt~G~ 466 (516)
|.. .....++.+.++. -+.|++|=+++.. ...++.++.|+.. =.|.-++.+....+..+ ...+ .++.
T Consensus 213 a~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~~--~~~~ 286 (348)
T 2d8a_A 213 ADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAP-KALEQGLQAVTPA---GRVSLLGLYPGKVTIDFNNLII--FKAL 286 (348)
T ss_dssp CSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCH-HHHHHHHHHEEEE---EEEEECCCCSSCCCCCHHHHTT--TTTC
T ss_pred CCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCH-HHHHHHHHHHhcC---CEEEEEccCCCCcccCchHHHH--hCCc
Confidence 110 0111356655543 2579998777632 2345566666532 23333554443344554 4432 2344
Q ss_pred EEEe
Q 010153 467 AIFA 470 (516)
Q Consensus 467 aifA 470 (516)
-+..
T Consensus 287 ~i~g 290 (348)
T 2d8a_A 287 TIYG 290 (348)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 354
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=63.32 E-value=7.3 Score=40.52 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 456899999999999999988654 21 257999998753
No 355
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=63.18 E-value=6.1 Score=36.55 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=26.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..+.+. | .++.++++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-----g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-----G-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEecC
Confidence 45799999999999999888653 5 368888875
No 356
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=62.83 E-value=5.2 Score=41.24 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
.+|||+|||.||+..|-.|.+... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999999877431 14 36888887643
No 357
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=62.79 E-value=6.3 Score=40.29 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-----G-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 35899999999999999887653 5 3689999873
No 358
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=62.75 E-value=5.7 Score=37.36 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 253 56677653
No 359
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=62.73 E-value=6.1 Score=40.13 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.||+..|-.|.+. |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999888763 64 67788865
No 360
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=62.66 E-value=14 Score=34.93 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=55.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~v 410 (516)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. +.....++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 7899997 7788888877754 25 3577777621 111111110 111111 111123567778766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345667776655567888544
No 361
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=62.62 E-value=16 Score=34.80 Aligned_cols=97 Identities=20% Similarity=0.137 Sum_probs=54.5
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
.||+|.|| |-.|..+++.|++. | .+++.+|++. +..+.+...+..+.. +.....++.+++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAA-----G-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 88899998888652 4 3688887742 111112111111211 11122357778875
Q ss_pred cCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|=+.+..+. -+..+++++.+..-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 9999987765431 1346777777655567888543
No 362
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=62.61 E-value=7.1 Score=39.56 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=20.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 010153 331 EHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
+.-|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45799999999999999998764
No 363
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=62.60 E-value=6.7 Score=36.40 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=27.7
Q ss_pred CCCcccceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 326 g~~L~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..++++.++||.||+ -.|.++|+.+++ .| -+++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecc
Confidence 356889999999984 466667777655 35 368888875
No 364
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=62.60 E-value=7.2 Score=39.69 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-----GW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-----Cc-----CCCEEEEECCCC
Confidence 36899999999999999988653 54 237899987643
No 365
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=62.58 E-value=5.4 Score=38.36 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=26.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
...+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999988653 53 56788853
No 366
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=62.52 E-value=5.2 Score=37.63 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.|+|+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999999977654 353 57788864
No 367
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=62.50 E-value=16 Score=35.93 Aligned_cols=86 Identities=19% Similarity=0.089 Sum_probs=54.7
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~ 409 (516)
+.||+++|+ |..|--+++.+.+. |. +-++.+|.+.- +. + .+ ..+-..|+.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 469999999 99887777765442 53 35677776411 00 0 01 11123679998875
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 010153 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (516)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (516)
.++|+.|=++- + .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI~tP-~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVIYVP-A-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEECCC-G-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEecC-H-HHHHHHHHHHHHCCCCEEE
Confidence 56999884433 3 5889999988876655533
No 368
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=62.43 E-value=8 Score=40.24 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (516)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998761 15 4689999
No 369
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=62.43 E-value=6.1 Score=40.33 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-----G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-----G-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCC
Confidence 45899999999999999887652 5 368899986
No 370
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=62.30 E-value=7.1 Score=40.38 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|||+|||.||+..|..+.+... ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~---------~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYG---------DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHG---------GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCC---------CCCeEEEEECCC
Confidence 4789999999999999999876420 125789999864
No 371
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=62.24 E-value=26 Score=34.47 Aligned_cols=99 Identities=18% Similarity=0.135 Sum_probs=57.6
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHh
Q 010153 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (516)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav 407 (516)
+..+|+|.|| |-.|..+++.|++. | .+++.+|++- .....+...+..+.. +.....++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE-----G-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC-----C-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 88888888887652 4 3688887742 111111111111111 111223577788
Q ss_pred cccCCcEEEEccCCCCC--C---------------CHHHHHHHHcCCCCcEEEEcC
Q 010153 408 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 446 (516)
+ ++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 7 49999988775431 1 235667776655567888543
No 372
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=62.11 E-value=6.5 Score=41.42 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..+|||+|||.||+..|..|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999999877420 14 37889998643
No 373
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=62.09 E-value=8.8 Score=40.50 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=30.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
...+|||+|||.||+..|..|.+.. .| .++.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCCc
Confidence 3579999999999999999987641 12 478899987543
No 374
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=62.02 E-value=7.3 Score=40.97 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=28.9
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
-.+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3456899999999999999998753 54 688898764
No 375
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=61.99 E-value=5.8 Score=39.32 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|||+|||.||+..|..+.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999988754 353 2357778764
No 376
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=61.98 E-value=6.5 Score=41.12 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=26.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+.+|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-----GV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 567899999999999999988763 64 35666654
No 377
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=61.90 E-value=5.9 Score=41.49 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999988653 5 3688999865
No 378
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=61.90 E-value=6.4 Score=40.06 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
-+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----G-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 4799999999999999887653 5 3689999863
No 379
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=61.76 E-value=6.6 Score=41.08 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=28.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999998876310 24 3688999854
No 380
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=61.73 E-value=14 Score=33.21 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=56.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCC-CCCHHHHhcc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 409 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~-~~~L~eav~~ 409 (516)
||+|.|| |-.|..+++.|++ .| -+++.++++. ++...+ .+..+.. +... ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 7899994 7777777777654 24 4688888752 111111 1111111 2122 2356777775
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1567899998776677888555
No 381
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=61.72 E-value=4.6 Score=39.07 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.+|+.+|..|.+.. ..| .++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999999886510 024 368888875
No 382
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=61.47 E-value=36 Score=33.32 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=51.2
Q ss_pred HHHHHhCCCcccceEEEe-CcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc--
Q 010153 320 AALKLIGGTLAEHRFLFL-GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 396 (516)
Q Consensus 320 ~Al~~~g~~L~d~riv~~-GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-- 396 (516)
++++..+ ...++++||. |+|..|..++.++... |. +++.+|+. ..| ++..++.=|..
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~-----Ga-------~Vi~~~~~----~~~---~~~~~~~Ga~~~~ 214 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE-----GF-------RPIVTVRR----DEQ---IALLKDIGAAHVL 214 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH-----TC-------EEEEEESC----GGG---HHHHHHHTCSEEE
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC-----CC-------EEEEEeCC----HHH---HHHHHHcCCCEEE
Confidence 6666655 4445788877 7888888887665432 52 68877752 111 11111110110
Q ss_pred cCCCCCHHHHhcc----cCCcEEEEccCCCCCCCHHHHHHHH
Q 010153 397 HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMA 434 (516)
Q Consensus 397 ~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma 434 (516)
.....++.+.++. -++|++|=+++.. ..++.++.|+
T Consensus 215 ~~~~~~~~~~v~~~~~~~g~D~vid~~g~~--~~~~~~~~l~ 254 (349)
T 3pi7_A 215 NEKAPDFEATLREVMKAEQPRIFLDAVTGP--LASAIFNAMP 254 (349)
T ss_dssp ETTSTTHHHHHHHHHHHHCCCEEEESSCHH--HHHHHHHHSC
T ss_pred ECCcHHHHHHHHHHhcCCCCcEEEECCCCh--hHHHHHhhhc
Confidence 1112356555543 3799999877643 2366666665
No 383
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=61.42 E-value=6.5 Score=37.39 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=24.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.--++|+|||+||+..|-.+.+ .| .++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 3458999999999998865543 35 468888874
No 384
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=61.28 E-value=5.6 Score=40.67 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999998765 24 479999986
No 385
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=61.21 E-value=4.4 Score=41.54 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999988742 3 368888874
No 386
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=61.07 E-value=7 Score=37.83 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=28.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..|.-|+|+|||+||+..|..+.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999988653 1253 67788875
No 387
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=61.03 E-value=5.9 Score=36.81 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=54.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~v 410 (516)
||+|.|| |-.|..+++.|++. ..| .+++.++++. ++.+.+......+.. +..+..++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889998 88888888877541 002 3577777631 111001111111111 11122357788876
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 411 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 411 kptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776421 24678889888766667888543
No 388
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=60.95 E-value=7.6 Score=38.39 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=18.8
Q ss_pred eEEEeCcchHHHHHHHHHHHH
Q 010153 333 RFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~ 353 (516)
+|+|+|||.||+..|-.|.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~ 22 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA 22 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhc
Confidence 699999999999999988763
No 389
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=60.92 E-value=6.6 Score=40.18 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+.++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 45799999999999999988653 5 3689999874
No 390
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=60.92 E-value=13 Score=36.42 Aligned_cols=96 Identities=24% Similarity=0.368 Sum_probs=51.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
+||-|+|-|..|.++|+.|+++ |. +++..|+ +.++.+.+. +.-+ ....|+.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr----~~~~~~~l~---~~G~---~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR----TASKAEPLT---KLGA---TVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC-----------CTTT---TTTC---EECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC----CHHHHHHHH---HcCC---eEeCCHHHHHhc--
Confidence 5899999999999999999764 53 5777775 233222221 1111 123567777775
Q ss_pred CcEEEEccCCCC----CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH
Q 010153 412 PTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALSNPTSQSECTA 456 (516)
Q Consensus 412 ptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectp 456 (516)
.|++|=+-..+. ++..+++..+. +.-||.=+|+=. |+.+-
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~---~~~iiid~sT~~--p~~~~ 105 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLG---KDGVHVSMSTIS--PETSR 105 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHC---TTCEEEECSCCC--HHHHH
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcC---CCeEEEECCCCC--hHHHH
Confidence 677764322111 23333444443 444676677533 44443
No 391
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=60.82 E-value=6.9 Score=39.85 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=28.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
.+|||+|||.||+..|..|.+.. .| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999987641 12 47888988653
No 392
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.74 E-value=8.4 Score=41.93 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999998764 5 3689999863
No 393
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=60.67 E-value=20 Score=33.22 Aligned_cols=77 Identities=13% Similarity=0.198 Sum_probs=41.6
Q ss_pred CCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHH
Q 010153 326 GGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (516)
Q Consensus 326 g~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ 404 (516)
..++++.+++|.||+ -.|..+|+.+++ .| -+++++|++- ++ +.... .+.-+-....++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAA-----DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 346888899999974 344445555543 35 3688888741 11 21111 1111211122355
Q ss_pred HHhccc-----CCcEEEEccCCC
Q 010153 405 DAVKVI-----KPTILIGSSGVG 422 (516)
Q Consensus 405 eav~~v-----kptvLIG~S~~~ 422 (516)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555543 689999777654
No 394
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=60.49 E-value=6.4 Score=37.81 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|++.++||+|+|..|...+++|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999888764 4 368888863
No 395
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=60.43 E-value=10 Score=34.23 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=57.1
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHh
Q 010153 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (516)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav 407 (516)
+..+|+|.|| |-.|..+++.|++. |- ..++++++++. ++.+.+. .+..+.. +.....++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~-----~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEG-----SD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-----TT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhc-----CC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999996 77888888887652 20 14678777642 1100010 0111111 111223577788
Q ss_pred cccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEEcC
Q 010153 408 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 446 (516)
+. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 75 8999977664321 1 467788887665567888543
No 396
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=60.42 E-value=9.9 Score=40.34 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=22.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
++++.+++|.|||.+|.++|..+.+. |. +++++|+.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999997777777666543 52 57888763
No 397
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.32 E-value=6.9 Score=40.12 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999887653 4 379999983
No 398
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=60.28 E-value=12 Score=33.99 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=40.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc-
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v- 410 (516)
+++|.|| |-.|..+++.|++ .| .+++++|++. ++ +.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~---~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----AD---IEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----SS---EEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----hH---ccc---cccCCcccHHHHHHHHHHcC
Confidence 6899988 6677777777654 25 3688888741 11 111 1111111113466666644
Q ss_pred -CCcEEEEccCCC
Q 010153 411 -KPTILIGSSGVG 422 (516)
Q Consensus 411 -kptvLIG~S~~~ 422 (516)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887654
No 399
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=60.23 E-value=7.7 Score=40.55 Aligned_cols=36 Identities=31% Similarity=0.423 Sum_probs=28.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
...+|+|+|||.||+..|..+.+. |+ ++.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~-----G~-------~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL-----GA-------RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-----CC-------eEEEEEeccc
Confidence 356899999999999999888653 63 6888887643
No 400
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=60.16 E-value=7.1 Score=40.56 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+-.|+|+|||.+|+++|..+.+. |+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-----G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-----GL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEECCC
Confidence 45799999999999999988653 64 588999864
No 401
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.07 E-value=6.3 Score=40.13 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL-----G-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 4799999999999999887652 5 378999986
No 402
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=59.99 E-value=6.7 Score=41.00 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=21.8
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHH
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
.-++..|+|+|||.||+..|-.|.+.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~ 33 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA 33 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC
Confidence 34567899999999999999988763
No 403
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.98 E-value=6.5 Score=40.83 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999988652 4 4689999863
No 404
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=59.89 E-value=8.6 Score=35.98 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=55.3
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~ea 406 (516)
+-...||+|.|| |-.|..+++.|++ .| .+++.+|++ ..| +. ...++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~-----------d~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-IT-----------NVLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TT-----------CHHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CC-----------CHHHHHHH
Confidence 345678999987 8888888887754 24 367878774 111 21 11246777
Q ss_pred hcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 407 VKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 407 v~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776679999988775431 13556777766544 7888554
No 405
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=59.88 E-value=18 Score=36.03 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhh
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW 393 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~ 393 (516)
+....+.|++..+....+++|+|.|||..|..++.++.. .|. +++.+|+. .++ +...++.+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~l 231 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVISTS----PSK---KEEALKNF 231 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----GGG---HHHHHHTS
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHhc
Confidence 334445677766655478999999999888887766543 352 57777752 111 11111111
Q ss_pred -cc---ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHh
Q 010153 394 -AH---EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 460 (516)
Q Consensus 394 -A~---~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~ 460 (516)
|. +......+.++.. ++|++|=+++.. ...++.++.|+.. =-|.-++.+....+..+.+.+
T Consensus 232 Ga~~v~~~~~~~~~~~~~~--~~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~ 296 (366)
T 1yqd_A 232 GADSFLVSRDQEQMQAAAG--TLDGIIDTVSAV-HPLLPLFGLLKSH---GKLILVGAPEKPLELPAFSLI 296 (366)
T ss_dssp CCSEEEETTCHHHHHHTTT--CEEEEEECCSSC-CCSHHHHHHEEEE---EEEEECCCCSSCEEECHHHHH
T ss_pred CCceEEeccCHHHHHHhhC--CCCEEEECCCcH-HHHHHHHHHHhcC---CEEEEEccCCCCCCcCHHHHH
Confidence 10 0000011222222 589988777643 3457788888642 234445555433345554443
No 406
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=59.71 E-value=10 Score=37.36 Aligned_cols=58 Identities=21% Similarity=0.134 Sum_probs=36.8
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 305 DDiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
++.++.....++..+.|++..+. -.+++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 34444444455556667755543 35678999999988877765543 2 364 56888875
No 407
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=59.70 E-value=8.3 Score=38.60 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
...|+|+|||.+|+.+|..|.+.. -| .++.++|+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~ 70 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEG 70 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCC
Confidence 368999999999999999887530 04 368888875
No 408
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=59.50 E-value=7.2 Score=36.51 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=24.2
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|++.+++|.|| |-.|..+|+.+++ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVA-----AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 467889999998 4455556665544 35 368888764
No 409
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=59.41 E-value=8.1 Score=39.60 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.||+..|..+.+. | .++.++|++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-----G-------~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-----K-------YNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCC
Confidence 35799999999999999888652 5 3689999654
No 410
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=59.35 E-value=6.2 Score=41.94 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+.+|||+|||.||+..|..|.+ +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999998862 1353 688999864
No 411
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=59.25 E-value=7.8 Score=39.63 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----G-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 45799999999999999988653 5 3689999854
No 412
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=59.23 E-value=6.8 Score=40.78 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=27.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+..|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 35689999999999999988865 364 577888764
No 413
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=59.14 E-value=8.8 Score=37.11 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=27.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.|+|+|||.+|+.+|-.|.+. |.+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECCC
Confidence 689999999999999888764 3100 0014788999863
No 414
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=59.02 E-value=6.1 Score=41.36 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 010153 333 RFLFLGAGEAGTGIAELIALEI 354 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~ 354 (516)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887654
No 415
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=58.92 E-value=8.1 Score=39.27 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987641 13 5789999865
No 416
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=58.74 E-value=8.3 Score=39.15 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999987641 12 57999998653
No 417
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.67 E-value=25 Score=34.17 Aligned_cols=56 Identities=18% Similarity=0.207 Sum_probs=33.1
Q ss_pred CcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 307 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 307 iQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
.++...-.++..+.+.+..+ .-.+++++|.|||..|...+.++ .+ .|. +.++.+|+
T Consensus 138 ~~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 138 EDGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 34444333444444444443 34678999999998887665443 32 363 56676765
No 418
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=58.67 E-value=8.5 Score=39.63 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+..|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----G-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----c-------CEEEEEeCC
Confidence 46899999999999999888653 5 368899984
No 419
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=58.66 E-value=6.4 Score=40.95 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=28.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 35689999999999999988754 364 688888874
No 420
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=58.32 E-value=8.5 Score=39.71 Aligned_cols=35 Identities=14% Similarity=0.341 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..+|+|+|||.||+..|..|.+. | .++.+++++.-
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G-------~~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----G-------LNVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCCC
Confidence 45799999999999999998763 5 35677776543
No 421
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=58.25 E-value=19 Score=35.42 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=36.5
Q ss_pred chHHHHHHHHHHHHHHhCCCccc--ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 309 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d--~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
++-...++..+.|+...++--.+ ++++|.|| |..|..+++++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556667433444456 89999998 9888888776653 353 478888763
No 422
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=58.18 E-value=12 Score=41.61 Aligned_cols=34 Identities=32% Similarity=0.323 Sum_probs=27.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.=.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 346 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASK-----GT-------PILMKDIN 346 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEEECCChhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 345899999999999999998764 64 57888864
No 423
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=58.02 E-value=8.2 Score=38.43 Aligned_cols=23 Identities=26% Similarity=0.436 Sum_probs=20.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALEI 354 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~ 354 (516)
.+|+|+|||.+|+..|..|.++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G 28 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEI 28 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHhc
Confidence 68999999999999999998763
No 424
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=58.00 E-value=9 Score=39.15 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999988764 5 468899986
No 425
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=57.98 E-value=11 Score=39.10 Aligned_cols=119 Identities=13% Similarity=0.019 Sum_probs=66.0
Q ss_pred cceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEc--CCCc---ccCCCccCCchhchhhccccCCCCCHH
Q 010153 331 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (516)
Q Consensus 331 d~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD--s~GL---i~~~R~~~l~~~k~~~A~~~~~~~~L~ 404 (516)
..||.|+| ||..|..+|-.|+.. ++-- |. ..+.|+| .... +.-... +|.+-..+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~-e~-~~l~L~d~d~~~~~~~~~G~am-DL~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFG-QD-QPIALKLLGSERSFQALEGVAM-ELEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTC-TT-CCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCC-CC-ceeEEEecCccchhhhhHHHHH-hHHhhhhhhcCCcEEecCCH
Confidence 36999999 699999998887652 4411 11 1255544 3210 000000 13322223433211124577
Q ss_pred HHhcccCCcEEEEccCC---CCC-----------CCHHHHHHHHcC-CCCcEEEEcCCCCCCCCCCHHHHhcc
Q 010153 405 DAVKVIKPTILIGSSGV---GRT-----------FTKEVIEAMASF-NEKPLILALSNPTSQSECTAEEAYTW 462 (516)
Q Consensus 405 eav~~vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~-~erPIIFaLSNPt~~~Ectpe~A~~w 462 (516)
+++++ .|++|=+.+. +|- .=++++++++++ +..-||+-.|||. .+..--|++.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv---D~~t~ia~k~ 171 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC---NTNALICLKN 171 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHT
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch---hHHHHHHHHH
Confidence 88887 8988744443 331 123455667765 7889999999995 4444445443
No 426
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=57.98 E-value=13 Score=37.65 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999998774 41 14677888753
No 427
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=57.96 E-value=8.9 Score=38.42 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+.+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999988653 53 477777653
No 428
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=57.90 E-value=7.8 Score=40.44 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHh-------hcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~-------~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|||+|||.||...|-.|.+...+ ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999999875410 0243 688888764
No 429
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=57.70 E-value=8.9 Score=38.07 Aligned_cols=91 Identities=18% Similarity=0.103 Sum_probs=51.1
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc--
Q 010153 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 396 (516)
Q Consensus 319 l~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-- 396 (516)
+.|+.....--.+++|+|.|+|..|...+.++.. .|. +++.+|+. +.+..+++.
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~~------------~~~~~~~~~lG 233 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSSS------------REKLDRAFALG 233 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEESC------------HHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEecC------------chhHHHHHHcC
Confidence 3444333444467899999999888777665532 362 57777752 112222221
Q ss_pred -----cCCCCCHHHHhc----ccCCcEEEEccCCCCCCCHHHHHHHHc
Q 010153 397 -----HEPVNNLLDAVK----VIKPTILIGSSGVGRTFTKEVIEAMAS 435 (516)
Q Consensus 397 -----~~~~~~L~eav~----~vkptvLIG~S~~~g~Ft~evv~~Ma~ 435 (516)
.....++.+.++ +.++|++|=+++ +..-++.++.|+.
T Consensus 234 a~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g--~~~~~~~~~~l~~ 279 (363)
T 3uog_A 234 ADHGINRLEEDWVERVYALTGDRGADHILEIAG--GAGLGQSLKAVAP 279 (363)
T ss_dssp CSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT--SSCHHHHHHHEEE
T ss_pred CCEEEcCCcccHHHHHHHHhCCCCceEEEECCC--hHHHHHHHHHhhc
Confidence 111134555444 336888888777 3444566666653
No 430
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=57.57 E-value=7.8 Score=40.07 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999987630 003 3799999874
No 431
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=57.54 E-value=8.5 Score=35.84 Aligned_cols=35 Identities=29% Similarity=0.353 Sum_probs=23.5
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
|++.+++|.|| |-.|..+|+.|++ .| -+++++|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~-----~G-------~~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLAR-----AG-------ANIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 66789999998 4455556666544 35 357887764
No 432
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=57.53 E-value=7.2 Score=39.64 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LG-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CC-------CCEEEEeCCCC
Confidence 4579999999999999988765 25 36889998653
No 433
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=57.41 E-value=24 Score=34.22 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=31.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 316 Agll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
...+.+++..+. -..++++|+|||+.|...+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344567776654 3577999999999887666555432 23 47888876
No 434
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=57.38 E-value=11 Score=36.08 Aligned_cols=97 Identities=12% Similarity=0.073 Sum_probs=59.2
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhh----------cc-ccC
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----------AH-EHE 398 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~----------A~-~~~ 398 (516)
..+|+|.|| |-.|..+++.|++. | .+++++|+.. .+ .....+.+ .. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH-----G-------YDVVIADNLV----NS---KREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCS----SS---CTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC-----C-------CcEEEEecCC----cc---hHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 77888888877652 5 3688887631 11 11111111 11 111
Q ss_pred CCCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 399 ~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
...++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 12357778886689999987765421 1346788888776678998544
No 435
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.34 E-value=14 Score=36.49 Aligned_cols=49 Identities=22% Similarity=0.195 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
.++..+.|++..+. -..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44445566654443 346799999999888877655432 363 57888875
No 436
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=57.22 E-value=6.3 Score=36.79 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=23.8
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|++.+++|.||+ -.|..+|+.+++ .| -+++++|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G-------~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLG-----EG-------AKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 5778899999984 445555555543 35 358888764
No 437
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=57.09 E-value=22 Score=34.54 Aligned_cols=108 Identities=23% Similarity=0.230 Sum_probs=57.6
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc---cCCCccCCchhc------hhhcc-
Q 010153 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHFK------KPWAH- 395 (516)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi---~~~R~~~l~~~k------~~~A~- 395 (516)
.+++..+|+|.|| |-.|..+++.|++.- .| .+++.+|+..-- ...+.+.+.... ..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~---~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENH---PK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHC---TT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhC---CC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 4577889999976 888888888886520 14 478888874210 000000111110 01111
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+.....++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 23479999977764321 124567777665555 888655
No 438
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.09 E-value=6.4 Score=39.24 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4689999999999999988843 12 79999986543
No 439
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=57.01 E-value=9.3 Score=36.18 Aligned_cols=77 Identities=12% Similarity=0.126 Sum_probs=42.9
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-------cccC
Q 010153 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (516)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-------~~~~ 398 (516)
.+|+++++||-||+ -.|.++|+.+++ .| -+++++|++ . +.+....+.+. -+-.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLAR-----AG-------ARVVLADLP----E---TDLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECT----T---SCHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEcCC----H---HHHHHHHHHhCCCeEEEECCCC
Confidence 36788999999984 345555555544 36 368888874 1 12222222211 0111
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 010153 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (516)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (516)
...++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 112455555544 799999776654
No 440
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=56.98 E-value=7 Score=36.49 Aligned_cols=84 Identities=21% Similarity=0.330 Sum_probs=54.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~v 410 (516)
.||+|.|| |-.|..+++.|.+ .| .+++.+++. ..| +. ...++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhc
Confidence 38999997 8888888887754 24 368888871 111 21 113577788877
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
++|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999987765431 13457777766555 4887544
No 441
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=56.97 E-value=7.8 Score=39.37 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=19.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (516)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999888764
No 442
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=56.85 E-value=6.6 Score=37.82 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=27.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
....|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 3578999999999999998875 1 5 3688899874
No 443
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=56.72 E-value=12 Score=36.28 Aligned_cols=101 Identities=13% Similarity=0.200 Sum_probs=58.6
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhch----------hhcc-c
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~----------~~A~-~ 396 (516)
++..+|+|.|| |-.|..+++.|++. | .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL-----D-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 55679999998 88888888887652 5 3688888742 111011111111 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.....++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111235777787 59999988875431 1345667776655566887543
No 444
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=56.60 E-value=9.7 Score=38.78 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=19.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 010153 332 HRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (516)
.+|+|+|||.||+..|..|.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~ 61 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA 61 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 5899999999999999988763
No 445
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=56.40 E-value=9.3 Score=39.32 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+.+|||+|||.||+..|..+.+ .| .++.++|++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EG-------LKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 4589999999999999987755 25 3589999853
No 446
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=56.33 E-value=31 Score=34.07 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=25.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+++|+|.|||..|..++.++... | | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----G-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----T-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC
Confidence 89999999988888877766432 5 2 68888863
No 447
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=56.25 E-value=12 Score=37.98 Aligned_cols=89 Identities=9% Similarity=0.101 Sum_probs=52.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccc-c-CCCCCHHHHhcc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H-EPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~-~-~~~~~L~eav~~ 409 (516)
.||.|+|+|..|..+|..|... | .+++.+|++- +.+. .+.. . ....++.++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAK-----SAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHH-----HHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHH-----HHHHcCCeeeCCHHHHHHh
Confidence 5899999999999999988653 5 3688887631 1111 1111 0 112467776654
Q ss_pred c--CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 I--KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 v--kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
. .+|++| ++... .-++++++.++...+.-||.=.+
T Consensus 65 a~~~aDlVi-lavP~-~~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 65 AAAEDALIV-LAVPM-TAIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HHHTTCEEE-ECSCH-HHHHHHHHHHHHHCTTCCEEECC
T ss_pred cccCCCEEE-EeCCH-HHHHHHHHHHHccCCCCEEEEcC
Confidence 2 367766 44433 24667777766554444554443
No 448
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=56.17 E-value=10 Score=38.79 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 329 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
-...+|+|+|||.||+..|..|.++ | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999998763 5 368888875
No 449
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=56.12 E-value=9.6 Score=38.35 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=26.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.+|+..|..|.+. | .++.++|+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEec
Confidence 46899999999999999988642 4 467777764
No 450
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=56.09 E-value=69 Score=32.22 Aligned_cols=135 Identities=13% Similarity=0.155 Sum_probs=82.6
Q ss_pred HHHHHHHHHHhhCCCeeeEeeeCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCCcc-cceEEEeC
Q 010153 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLG 338 (516)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Al~~~g~~L~-d~riv~~G 338 (516)
+...++.+ .+| .++ |-+-.++ +.+.+.+.+|- ++||.| || +-=-.=+||=++.-.+.. ++++ +.||+++|
T Consensus 81 l~DTarvl-s~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVI-GAM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHH-HHH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEES
T ss_pred HHHHHHHH-HHh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEc
Confidence 33444433 345 443 4455554 45566666765 689998 54 333345566666655544 4799 99999999
Q ss_pred cchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcE
Q 010153 339 AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTI 414 (516)
Q Consensus 339 AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~----~~~~~L~eav~~vkptv 414 (516)
-+. -+|+-++.++.+ .|+ ++.++-.+|+.-.. + +-...+.+|+.. ....++.|||++ +||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP--E-IWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH--H-HHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 963 488888887766 474 68888887774321 1 111112333321 122689999998 999
Q ss_pred EEEcc
Q 010153 415 LIGSS 419 (516)
Q Consensus 415 LIG~S 419 (516)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 97654
No 451
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=56.04 E-value=8.7 Score=40.54 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4689999999999999988865 364 477888753
No 452
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=56.03 E-value=7.9 Score=37.25 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=60.5
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhc----------hhhcc-c
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 396 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k----------~~~A~-~ 396 (516)
++..+|+|.|| |-.|..+++.|++. | .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL-----N-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 56789999996 88999998888652 5 36888877421 1100011111 01111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.....++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 112235777887 59999988875321 1334788888776678998633
No 453
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=55.89 E-value=5.8 Score=39.54 Aligned_cols=97 Identities=15% Similarity=0.126 Sum_probs=53.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav 407 (516)
+....||.|+|+|..|...++.+.. +..|. +-+.++|++ .++ .....+.|-.......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHh
Confidence 3445799999999988776665542 11121 223466752 111 2222222211112247899999
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 010153 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (516)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (516)
+.-++|+++ +++.. .+..++++...+. .++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 987899988 55544 4555665554433 356654
No 454
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=55.43 E-value=9.3 Score=38.46 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+|+|+|||.||+..|..|.+. |.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-----G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-----PCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-----SSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCC-----CcEEEEeCC
Confidence 5899999999999999998653 531 167777764
No 455
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=55.35 E-value=8.7 Score=39.35 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=27.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 456899999999999999988653 5 368899965
No 456
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=55.11 E-value=7.5 Score=36.09 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=43.8
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhc-------cccC
Q 010153 327 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (516)
Q Consensus 327 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A-------~~~~ 398 (516)
.++++.+++|.||+. .|..+|+.+++ .| .+++++|++- +.+...++.+. -+..
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999853 45556666554 35 3688888741 11222222111 1111
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 010153 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (516)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (516)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 123455666655 799999776653
No 457
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=54.89 E-value=5.5 Score=40.56 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=26.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|++-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999988754 353 567777654
No 458
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=54.87 E-value=28 Score=32.27 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=24.0
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.++++.++||-||+ -.|.++|+.+++ .| -+++++|++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~-----~G-------~~V~~~~r~ 40 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQ-----EG-------ATVLGLDLK 40 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 35788899999985 345555555543 36 368888864
No 459
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=54.83 E-value=10 Score=41.70 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~-----G-------~~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES-----G-------YTVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 46899999999999999998652 5 3689999854
No 460
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=54.78 E-value=12 Score=39.33 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=57.7
Q ss_pred ceEEEeCcchHHHH-HHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCC--CCCHHHHhc
Q 010153 332 HRFLFLGAGEAGTG-IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVK 408 (516)
Q Consensus 332 ~riv~~GAGsAg~G-IA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~--~~~L~eav~ 408 (516)
+||.|+|.|-+|++ +|++|.+ .| -++...|.+ .. +....+....-. .+.-.+-+.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~----~~------~~~~~l~~~gi~~~~g~~~~~~~ 80 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLA----PN------SVTQHLTALGAQIYFHHRPENVL 80 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSS----CC------HHHHHHHHTTCEEESSCCGGGGT
T ss_pred CEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECC----CC------HHHHHHHHCCCEEECCCCHHHcC
Confidence 69999999999995 8988765 36 367888864 11 111111111000 011112233
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC-cEEEecCC
Q 010153 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG-RAIFASGS 473 (516)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G-~aifAsGS 473 (516)
. +|++|=.++.+ .=++++.++... .-|||= | +|-++.+.++ +.|--|||
T Consensus 81 ~--~d~vV~Spgi~-~~~p~~~~a~~~--gi~v~~---------~--~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 D--ASVVVVSTAIS-ADNPEIVAAREA--RIPVIR---------R--AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp T--CSEEEECTTSC-TTCHHHHHHHHT--TCCEEE---------H--HHHHHHHHTTSEEEEEECS
T ss_pred C--CCEEEECCCCC-CCCHHHHHHHHC--CCCEEc---------H--HHHHHHHhcCCCEEEEecC
Confidence 3 88888444554 457888777653 346652 2 2333333444 46777887
No 461
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=54.72 E-value=12 Score=38.66 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+|+|+|+|.||+..|..+.+. |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998764 41 2578899876
No 462
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=54.48 E-value=11 Score=36.04 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=28.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
.+..|+|+|||.||+..|..+.+. .| .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCCC
Confidence 356899999999999999887541 14 36888888643
No 463
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=54.46 E-value=9.5 Score=38.92 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCc
Q 010153 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (516)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GL 377 (516)
..|+|+|||.||+..|-.+.+ .| .++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EG-------ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC
Confidence 579999999999999988765 25 36889998653
No 464
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=54.27 E-value=23 Score=33.39 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=49.8
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 010153 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (516)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~ 409 (516)
+.+|+|.|| |-.|..+++.|++ .| .+++.+|+. +.. + . .+.-+.....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 8888888888764 24 367777752 111 0 1 111122223467788887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (516)
.++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999987764321 13456777665443 6777543
No 465
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=54.21 E-value=1.2e+02 Score=30.45 Aligned_cols=129 Identities=14% Similarity=0.156 Sum_probs=81.5
Q ss_pred HHHhhCCCeeeEeeeCCCchHHHHHHHHcCCCceec--c--CCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHH
Q 010153 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--D--DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGT 344 (516)
Q Consensus 269 v~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--D--DiQGTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~ 344 (516)
+-.+| .++ |-+-.++ +.+.+.+.+|-.++||.| | ..|=| =+||=++.-.+..| +|++.||+++|-|.= -
T Consensus 94 vls~~-~D~-iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~g-~l~gl~va~vGD~~~-~ 166 (310)
T 3csu_A 94 VISTY-VDA-IVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQG-RLDNLHVAMVGDLKY-G 166 (310)
T ss_dssp HHTTT-CSE-EEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHHS-CSSSCEEEEESCTTT-C
T ss_pred HHHHh-CCE-EEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHhC-CcCCcEEEEECCCCC-C
Confidence 34456 443 4466665 455667778865799999 4 34544 45666666555554 799999999998631 1
Q ss_pred HHHHHHHHHHHhhc-CCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc-C---CCCCHHHHhcccCCcEEEEcc
Q 010153 345 GIAELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-E---PVNNLLDAVKVIKPTILIGSS 419 (516)
Q Consensus 345 GIA~ll~~~~~~~~-G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~-~---~~~~L~eav~~vkptvLIG~S 419 (516)
-+|+-++.++.+ . |+ ++.++-.+|+--. +.-..+++.. . ...++.||+++ +||+.-..
T Consensus 167 rva~Sl~~~~~~-~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~ 229 (310)
T 3csu_A 167 RTVHSLTQALAK-FDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTR 229 (310)
T ss_dssp HHHHHHHHHHHT-SSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC
T ss_pred chHHHHHHHHHh-CCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECC
Confidence 256777777765 4 64 6888888777332 1112233321 1 23689999998 99999765
Q ss_pred CC
Q 010153 420 GV 421 (516)
Q Consensus 420 ~~ 421 (516)
-+
T Consensus 230 ~q 231 (310)
T 3csu_A 230 VQ 231 (310)
T ss_dssp --
T ss_pred cc
Confidence 43
No 466
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=54.20 E-value=13 Score=38.56 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=26.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (516)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45899999999999999998761 15 3689999
No 467
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=54.05 E-value=11 Score=37.23 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=20.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHH
Q 010153 330 AEHRFLFLGAGEAGTGIAELIAL 352 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~ 352 (516)
+..+|+|+|||.||+..|..|.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~ 27 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ 27 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHh
Confidence 45689999999999999999865
No 468
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=54.00 E-value=14 Score=37.59 Aligned_cols=23 Identities=30% Similarity=0.416 Sum_probs=20.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 010153 331 EHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
..+|+|+|||.+|+..|..|.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~ 55 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA 55 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC
Confidence 46899999999999999998764
No 469
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=53.92 E-value=68 Score=33.11 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=77.4
Q ss_pred CchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCC-cccce--EEEeCc----chHHHHHHHHHHHHHHh
Q 010153 286 NHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT-LAEHR--FLFLGA----GEAGTGIAELIALEISK 356 (516)
Q Consensus 286 ~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Al~~~g~~-L~d~r--iv~~GA----GsAg~GIA~ll~~~~~~ 356 (516)
.+.+.+.+.+|- ++||.| ||.| -.=+||=++.-.+..|++ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~H--PtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETITH--PCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSCC--HHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCCC--cHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 456667777775 699999 7774 445677777777777765 99999 889998 6 3567777777765
Q ss_pred hcCCChhcccCeEEEEcCC-CcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEEEEccC
Q 010153 357 QTKAPVEETRKKICLVDSK-GLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 420 (516)
Q Consensus 357 ~~G~s~eeA~~~i~lvDs~-GLi~~~R~~~l~~~k~~~A~~~----~~~~~L~eav~~vkptvLIG~S~ 420 (516)
.|+ +|.++-.+ |+.-.. + +-..-+.+|+.. ....++.|||++ +||+.-..=
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~--~-~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE--R-YMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH--H-HHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECC
T ss_pred -cCC-------EEEEEcCccccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCc
Confidence 474 68888887 763321 1 111112233321 123689999998 999987653
No 470
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=53.88 E-value=28 Score=33.91 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=50.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~eav~~vk 411 (516)
||+|.|| |-.|..+++.|++. |. -+++.+|+. ....+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 89999998888764 42 257766664 011346667765
Q ss_pred CcEEEEccCCCC------------CCCHHHHHHHHcCCCC-cEEEEcC
Q 010153 412 PTILIGSSGVGR------------TFTKEVIEAMASFNEK-PLILALS 446 (516)
Q Consensus 412 ptvLIG~S~~~g------------~Ft~evv~~Ma~~~er-PIIFaLS 446 (516)
+|++|=+.+... ..+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 888886654321 1246688888765544 6777433
No 471
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=53.78 E-value=36 Score=31.62 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=42.2
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 010153 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (516)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~~~~~~L~e 405 (516)
..+++.+++|.||+ -.|..+|+.+++ .| -+++++|++- ...+.+. +..+.-+- ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQ-----EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHH-----TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 46888999999984 445556665543 35 3688888753 0000010 00111111 235666
Q ss_pred Hhccc-CCcEEEEccCCC
Q 010153 406 AVKVI-KPTILIGSSGVG 422 (516)
Q Consensus 406 av~~v-kptvLIG~S~~~ 422 (516)
+++.+ ++|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66655 799999777643
No 472
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=53.72 E-value=42 Score=31.42 Aligned_cols=95 Identities=15% Similarity=0.180 Sum_probs=53.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010153 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (516)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~ 409 (516)
.||+|.|| |-.|..+++.|++. | .+++.+|+.. ........ ....+.. +..+.. +.++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~~ 63 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-----G-------YEVVVVDNLS---SGRREFVN-PSAELHVRDLKDYS-WGAGIKG 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCS---SCCGGGSC-TTSEEECCCTTSTT-TTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCC---CCchhhcC-CCceEEECccccHH-HHhhcCC
Confidence 37999998 88999998888652 5 3677777631 11111011 1111111 111222 5555553
Q ss_pred cCCcEEEEccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 010153 410 IKPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 410 vkptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 446 (516)
|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 64 ---d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 ---DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp ---SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ---CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999977764321 1 235677776666678888554
No 473
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=53.72 E-value=24 Score=32.25 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=24.6
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..|++.+++|.||+ -.|.++|+.+++ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAA-----HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHH-----CC-------CEEEEEecC
Confidence 35788999999984 344455555543 35 368888874
No 474
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=53.39 E-value=9.6 Score=44.31 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|++.||+++|||.-|+-+++.|+.+ |+... -..+|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 57789999999999999999999887 54211 12689999976
No 475
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=53.22 E-value=15 Score=35.34 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=27.5
Q ss_pred CCCcccceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 326 g~~L~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
..+|++.++||.||+ -.|.+||+.+++ .| -+++++|++
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~ 65 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLS 65 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 346888999999996 355557777765 36 368888875
No 476
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=53.18 E-value=28 Score=34.44 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
.++..+.|+.....--..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 344444455333333457899999999888877665433 253 46888875
No 477
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=53.06 E-value=11 Score=38.70 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
+.+|+|+|||-+|+..|-.|.++ | +++.++|++.-+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~-----G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVD-----G-------KKVLHIDKQDHY 46 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCCCC
Confidence 46899999999999999988653 5 468888887543
No 478
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=53.05 E-value=24 Score=34.05 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=59.1
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCch-----hchhhcc-ccCCCC
Q 010153 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 401 (516)
Q Consensus 329 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~-----~k~~~A~-~~~~~~ 401 (516)
+++.+|+|.|| |-.|..+++.|++. | .+++.+|+.. .+...+.. .+..+.. +.....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM-----G-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 88888888887652 5 3688888742 11111110 0111111 111123
Q ss_pred CHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 010153 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 446 (516)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 446 (516)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988775321 0233566665543 467888655
No 479
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=52.98 E-value=9.9 Score=37.36 Aligned_cols=101 Identities=19% Similarity=0.212 Sum_probs=60.5
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhh-------cc-cc
Q 010153 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-------AH-EH 397 (516)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~-------A~-~~ 397 (516)
..+++.+|+|.|| |..|..+++.|++. .|. ++++++|++-- .+...++.+ .. +-
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECCC
Confidence 4577889999996 89999999888653 142 47888876411 011111111 11 11
Q ss_pred CCCCCHHHHhcccCCcEEEEccCCCCC----C------------CHHHHHHHHcCCCCcEEEEcC
Q 010153 398 EPVNNLLDAVKVIKPTILIGSSGVGRT----F------------TKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~g~----F------------t~evv~~Ma~~~erPIIFaLS 446 (516)
....++.++++. +|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 112356777774 9999988876531 0 234666666665567888544
No 480
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=52.63 E-value=28 Score=34.38 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=29.3
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 319 l~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
+.++......-.+++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333344457899999999888877765533 253 47888875
No 481
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=52.50 E-value=28 Score=34.44 Aligned_cols=45 Identities=16% Similarity=0.049 Sum_probs=29.1
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 319 l~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
+.++.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 180 ~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 3344333333457899999999888877665533 253 47888875
No 482
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=52.28 E-value=5.6 Score=37.09 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=55.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010153 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (516)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~-~~~~~~~L~eav~~v 410 (516)
+|+|.|| |-.|..+++.|++. ..| .+++.++++. .+...+......+.. +-.+..++.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 88888888877542 002 3577777641 111101111111111 11122357788875
Q ss_pred CCcEEEEccCCCC------CCCHHHHHHHHcCCCCcEEEEcC
Q 010153 411 KPTILIGSSGVGR------TFTKEVIEAMASFNEKPLILALS 446 (516)
Q Consensus 411 kptvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIFaLS 446 (516)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998876421 12356777777666567888543
No 483
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=52.03 E-value=12 Score=40.00 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.+|+++|..+.+ .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4679999999999999998865 364 588998764
No 484
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=51.99 E-value=11 Score=43.42 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.||+..|..|.+. |. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-----G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-----GY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-----CC------CcEEEEeCC
Confidence 56899999999999999998653 53 268899886
No 485
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=51.95 E-value=23 Score=35.66 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=47.6
Q ss_pred HHHHHHhCCCccc-ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcccCCCccCCchhchhhcccc
Q 010153 319 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 397 (516)
Q Consensus 319 l~Al~~~g~~L~d-~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~~A~~~ 397 (516)
|+.-.+...++++ .||-|+|+|..|-.-++.+.........+ .+-.+=+-++|++ ..| . +.+|...
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~----~~~---a----~~~a~~~ 79 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD----QAM---A----ERHAAKL 79 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS----HHH---H----HHHHHHH
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC----HHH---H----HHHHHHc
Confidence 3444445555665 69999999988876655554432110011 0111223355652 111 1 2333321
Q ss_pred --C-CCCCHHHHhcccCCcEEEEccCCCCCCCHHH-HHHHH
Q 010153 398 --E-PVNNLLDAVKVIKPTILIGSSGVGRTFTKEV-IEAMA 434 (516)
Q Consensus 398 --~-~~~~L~eav~~vkptvLIG~S~~~g~Ft~ev-v~~Ma 434 (516)
+ -..++.|.++.-++|+++ +++.. .+-.++ +++|.
T Consensus 80 ~~~~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~ 118 (412)
T 4gqa_A 80 GAEKAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIA 118 (412)
T ss_dssp TCSEEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCCeEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHH
Confidence 1 237899999988899887 56655 344444 44454
No 486
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=51.73 E-value=12 Score=37.73 Aligned_cols=23 Identities=30% Similarity=0.463 Sum_probs=20.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 010153 331 EHRFLFLGAGEAGTGIAELIALE 353 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (516)
+.+|+|+|||.||+..|..|.+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~ 29 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ 29 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHh
Confidence 46899999999999999998764
No 487
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=51.72 E-value=8.5 Score=38.13 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=29.8
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 328 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999998764 4 368888764
No 488
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=51.69 E-value=14 Score=39.09 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=30.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCCcc
Q 010153 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (516)
Q Consensus 327 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~GLi 378 (516)
.+..+..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 34456789999999999999988765 363 68889887654
No 489
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=51.65 E-value=11 Score=38.42 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=26.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+..|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-----~G-------~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-----LG-------KKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 3579999999999999988764 25 468899984
No 490
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=51.43 E-value=14 Score=37.20 Aligned_cols=152 Identities=17% Similarity=0.195 Sum_probs=74.7
Q ss_pred CCcccccccccchHHHHHhcCCCCCeeEEEEecCcceecCCCCCCCccccchhhHHHHHHhcCCCCCCeeeEEeecCCCc
Q 010153 157 PQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNN 236 (516)
Q Consensus 157 p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~GKl~LY~a~gGI~P~~~lPI~LDvGTnn 236 (516)
|||.-++--|-++.. -.+..+++||||.+.=| |.--+ .. =||. .+|+.+-.+ +
T Consensus 16 ~~~~~~~~~~~~~~~------~~~~Mki~IvTDSt~dL------------~~e~~---~~-~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQQM------GRGSMNIAVVTDSTAYI------------PKEMR---EQ-HQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHH---HH-HTEE---EECCEEECS--S
T ss_pred cCccccccccchhhh------CcCCCcEEEEEECCCCC------------CHHHH---Hh-CCeE---EEeEEEEEC--C
Confidence 677666555544432 23335899999998633 22111 11 2577 888888875 2
Q ss_pred hhcccCccccccccCCCChhhhHHHHHHHHHHHHH--hhCCCeeeEeeeCCCchHHHHHHHHc---CC---CceeccCCc
Q 010153 237 EQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAFELLAKYG---TT---HLVFNDDIQ 308 (516)
Q Consensus 237 e~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~--~fGp~~lIq~EDf~~~~af~iL~ryr---~~---~~~FnDDiQ 308 (516)
++..++ .+- -.+||.+.++. .. |+ =+.|+--++++-|+ ++ +-+++
T Consensus 69 ~~Y~D~-------------~di--~~~efy~~m~~~~~~-p~-------TSqPs~~~~~~~fe~l~~~~~~Ii~I~---- 121 (315)
T 3fys_A 69 ETYREE-------------IEL--DWKSFYEEVKKHNEL-PT-------TSQPPIGELVALYEELGKSYDAVISIH---- 121 (315)
T ss_dssp CEEEBT-------------TTB--CHHHHHHHHHTTTCC-CE-------EECCCHHHHHHHHHHHTTTCSEEEEEE----
T ss_pred EEEECC-------------CCC--CHHHHHHHHHhCCCC-cc-------cCCCCHHHHHHHHHHHHhcCCcEEEEe----
Confidence 332222 111 14677777664 22 31 23444444444443 22 22222
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHH--HHhhcCC-Chhcc
Q 010153 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALE--ISKQTKA-PVEET 365 (516)
Q Consensus 309 GTaaV~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~--~~~~~G~-s~eeA 365 (516)
=+-.|.|-+++.+.....+.+.+|-++=..+++.|..-++..+ |.+ +|. |.||.
T Consensus 122 --iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~-~G~~s~eeI 178 (315)
T 3fys_A 122 --LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIK-NGASSPEDI 178 (315)
T ss_dssp --SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHHH-TTCCCHHHH
T ss_pred --CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHHH-cCCCCHHHH
Confidence 1223455566666666667777888887777777776666554 444 699 88874
No 491
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=51.40 E-value=9.8 Score=34.81 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=23.7
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.++++.+++|.||. -.|..+|+.|+ + .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~----~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFV----E-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHH----H-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 35778899999984 33444555544 3 35 368888864
No 492
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=51.24 E-value=10 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4679999999999999988765 364 58888876
No 493
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=51.07 E-value=10 Score=38.21 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=25.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
+.+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~-----g~-------~v~v~E~~ 48 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSR-----GT-------DAVLLESS 48 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEEcC
Confidence 35899999999999999988653 53 56666665
No 494
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=51.03 E-value=21 Score=33.13 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=26.2
Q ss_pred CCcccceEEEeCcc-h--HHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 327 GTLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 327 ~~L~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.++++.++||.||+ . .|.++|+.+++ .|. +++++|+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~ 42 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAG 42 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCc
Confidence 35788999999985 3 56667777654 363 58888774
No 495
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=50.93 E-value=25 Score=34.19 Aligned_cols=50 Identities=12% Similarity=-0.073 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.++..+.|++....--.+++++|.|| |..|..+++++.. .| -+++.+|+.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 44445556654444456789999996 9888888877654 35 268888764
No 496
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=50.88 E-value=27 Score=34.84 Aligned_cols=49 Identities=18% Similarity=0.108 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
.++..+.|++. ..--.+++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 170 ~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 34445666663 33345789999999988887765543 2 363 57888876
No 497
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=50.48 E-value=11 Score=40.71 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
..+|||+|+|.||+..|..+.+ .| .++.++|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 4689999999999999988854 24 3689999864
No 498
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=50.46 E-value=15 Score=37.95 Aligned_cols=34 Identities=32% Similarity=0.561 Sum_probs=26.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCC
Q 010153 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (516)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~ 375 (516)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~-----g-------~~v~v~E~~ 61 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS-----G-------QRVLIVDRR 61 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-----C-------CceEEEecc
Confidence 356899999999999999887653 4 357777765
No 499
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=50.36 E-value=12 Score=40.88 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcCCC
Q 010153 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (516)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs~G 376 (516)
+..|+|+|||.||+..|-.|.+...+..|+ ++.++|++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 457999999999999999887622111365 577888753
No 500
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=50.28 E-value=21 Score=35.07 Aligned_cols=48 Identities=21% Similarity=0.082 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhcccCeEEEEcC
Q 010153 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (516)
Q Consensus 314 ~LAgll~Al~~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvDs 374 (516)
.++..+.|++..+. -..++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 153 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 44445566655443 356899999999877777665432 363 3777775
Done!