BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010158
(516 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296086738|emb|CBI32373.3| unnamed protein product [Vitis vinifera]
Length = 613
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/476 (75%), Positives = 406/476 (85%)
Query: 1 MEATLLSSHHFTPQLFTTTPVKLGGGHVLADNRFCHPLCTKTFVSVRLSLLDSKRRQVPL 60
MEATLLSSHHF P+ F+ P K GG V + C P +T VS++L +S R+ L
Sbjct: 35 MEATLLSSHHFNPRFFSPKPFKFPGGQVEHGLQLCCPFYARTNVSLKLISSESSARRFSL 94
Query: 61 LNRPFLSRANKRYSVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDN 120
L+RPFLSRANK+ V S+QLRSDY+N EA+ SVN E P R DD D G +V ++
Sbjct: 95 LSRPFLSRANKKLCVNFSEQLRSDYLNAEATPLQSVNDELFPQRHDDGSDVFGPHNVNNS 154
Query: 121 ETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG 180
ET + + KM++NRFLNF RL SVLNNAAESFFKSEIRRRLFVTAVL+VISR+GYFIPLPG
Sbjct: 155 ETLQPRTKMFRNRFLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVISRVGYFIPLPG 214
Query: 181 FDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL 240
FDRRL+P+DYLSFVSGSVDELGDF ELKLS FQLGISPQI ASILMQVLCH+VPSLV+L
Sbjct: 215 FDRRLMPEDYLSFVSGSVDELGDFAGELKLSLFQLGISPQIAASILMQVLCHVVPSLVKL 274
Query: 241 RKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGA 300
RKEGLDGHEKIKSYIWWISLGFAILEA+++ACYSL YS+YAASH VKHVMVT LVCGA
Sbjct: 275 RKEGLDGHEKIKSYIWWISLGFAILEALVLACYSLTYSVYAASHRVKHVMVTTLFLVCGA 334
Query: 301 MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVF 360
MTM+WICD ISESGFGQGSSLIICVGILTGYT+TLYKML QL G +V WWP++L +LGVF
Sbjct: 335 MTMTWICDKISESGFGQGSSLIICVGILTGYTDTLYKMLVQLSGGAVSWWPYILAVLGVF 394
Query: 361 TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
TIVTMWAVVVTEGCRK+KLQYYGFKLASA R+DSPITEVEPYIPFNINPSGMQPVLTT Y
Sbjct: 395 TIVTMWAVVVTEGCRKIKLQYYGFKLASATRDDSPITEVEPYIPFNINPSGMQPVLTTAY 454
Query: 421 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
LLAFPSILAS+L SPFW+H+KEILNPETS+GA PWVYY+IYAFFVF+FNIFDI ++
Sbjct: 455 LLAFPSILASLLRSPFWEHIKEILNPETSIGAEPWVYYSIYAFFVFVFNIFDIANM 510
>gi|225437006|ref|XP_002272499.1| PREDICTED: preprotein translocase subunit secY-like [Vitis
vinifera]
Length = 668
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/463 (74%), Positives = 395/463 (85%)
Query: 14 QLFTTTPVKLGGGHVLADNRFCHPLCTKTFVSVRLSLLDSKRRQVPLLNRPFLSRANKRY 73
+L + + V+ GG V + C P +T VS++L +S R+ LL+RPFLSRANK+
Sbjct: 103 ELKSVSHVRRTGGQVEHGLQLCCPFYARTNVSLKLISSESSARRFSLLSRPFLSRANKKL 162
Query: 74 SVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNR 133
V S+QLRSDY+N EA+ SVN E P R DD D G +V ++ET + + KM++NR
Sbjct: 163 CVNFSEQLRSDYLNAEATPLQSVNDELFPQRHDDGSDVFGPHNVNNSETLQPRTKMFRNR 222
Query: 134 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 193
FLNF RL SVLNNAAESFFKSEIRRRLFVTAVL+VISR+GYFIPLPGFDRRL+P+DYLSF
Sbjct: 223 FLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVISRVGYFIPLPGFDRRLMPEDYLSF 282
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKS 253
VSGSVDELGDF ELKLS FQLGISPQI ASILMQVLCH+VPSLV+LRKEGLDGHEKIKS
Sbjct: 283 VSGSVDELGDFAGELKLSLFQLGISPQIAASILMQVLCHVVPSLVKLRKEGLDGHEKIKS 342
Query: 254 YIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
YIWWISLGFAILEA+++ACYSL YS+YAASH VKHVMVT LVCGAMTM+WICD ISES
Sbjct: 343 YIWWISLGFAILEALVLACYSLTYSVYAASHRVKHVMVTTLFLVCGAMTMTWICDKISES 402
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
GFGQGSSLIICVGILTGYT+TLYKML QL G +V WWP++L +LGVFTIVTMWAVVVTEG
Sbjct: 403 GFGQGSSLIICVGILTGYTDTLYKMLVQLSGGAVSWWPYILAVLGVFTIVTMWAVVVTEG 462
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
CRK+KLQYYGFKLASA R+DSPITEVEPYIPFNINPSGMQPVLTT YLLAFPSILAS+L
Sbjct: 463 CRKIKLQYYGFKLASATRDDSPITEVEPYIPFNINPSGMQPVLTTAYLLAFPSILASLLR 522
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
SPFW+H+KEILNPETS+GA PWVYY+IYAFFVF+FNIFDI ++
Sbjct: 523 SPFWEHIKEILNPETSIGAEPWVYYSIYAFFVFVFNIFDIANM 565
>gi|147784859|emb|CAN77495.1| hypothetical protein VITISV_011897 [Vitis vinifera]
Length = 1622
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/450 (76%), Positives = 385/450 (85%), Gaps = 3/450 (0%)
Query: 27 HVLADNRFCHPLCTKTFVSVRLSLLDSKRRQVPLLNRPFLSRANKRYSVYSSDQLRSDYV 86
HV + C P +T VS++L +S R+ LL+RPFLSRANK+ V S +SDY+
Sbjct: 854 HVERGLQLCCPFYARTNVSLKLISSESSARRFSLLSRPFLSRANKKLCVNFS---QSDYL 910
Query: 87 NVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNN 146
N EA+ SVN E P R DD D G DV ++ET + + KM++NRFLNF RL SVLNN
Sbjct: 911 NAEATPLQSVNDELFPQRHDDGSDVFGPHDVNNSETLQPRTKMFRNRFLNFARLGSVLNN 970
Query: 147 AAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGA 206
AAE+FFKSEIRRRLFVTAVL+VISR+GYFIPLPGFDRRL+P+DYLSFVSGSVDELGDF
Sbjct: 971 AAETFFKSEIRRRLFVTAVLLVISRVGYFIPLPGFDRRLMPEDYLSFVSGSVDELGDFAG 1030
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
ELKLS FQLGISPQI ASILMQVLCH+VPSLV+LRKEGLDGHEKIKSYIWWISLGFAILE
Sbjct: 1031 ELKLSLFQLGISPQIAASILMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWISLGFAILE 1090
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A+++ACYSL YS+YAASH VKHVMVT LVCGAMTM+WICD ISESGFGQGSSLIICVG
Sbjct: 1091 ALVLACYSLTYSVYAASHRVKHVMVTTLFLVCGAMTMTWICDKISESGFGQGSSLIICVG 1150
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
ILTGYT+TLYKML QL G +V WWP++L +LGVFTIVTMWAVVVTEGCRK+KLQYYGFKL
Sbjct: 1151 ILTGYTDTLYKMLVQLSGGAVSWWPYILAVLGVFTIVTMWAVVVTEGCRKIKLQYYGFKL 1210
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
ASA R+DSPITEVEPYIPFNINPSGMQPVLTT YLLAFPSILAS+L SPFW+HVKEILNP
Sbjct: 1211 ASATRDDSPITEVEPYIPFNINPSGMQPVLTTAYLLAFPSILASLLRSPFWEHVKEILNP 1270
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
ETS+GA PWVYY+IYAFFVF+FNIFDI ++
Sbjct: 1271 ETSIGAEPWVYYSIYAFFVFVFNIFDIANM 1300
>gi|255559472|ref|XP_002520756.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223540141|gb|EEF41718.1| protein translocase secy subunit, putative [Ricinus communis]
Length = 538
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/406 (81%), Positives = 366/406 (90%), Gaps = 5/406 (1%)
Query: 71 KRYSVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMY 130
K++SV SSDQL+SDY N E SA E + PR DD L D + N T +S+PKMY
Sbjct: 2 KKFSVNSSDQLQSDYANAEPMSA-----EPIAPRADDGASFLSLNDASGNITLQSQPKMY 56
Query: 131 KNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY 190
+NRFL+F+R+SSV NNAAESFFKSEIRRRLFVTAVLIVISR+GY+IPLPGFDRRLIPQDY
Sbjct: 57 RNRFLDFVRISSVFNNAAESFFKSEIRRRLFVTAVLIVISRVGYYIPLPGFDRRLIPQDY 116
Query: 191 LSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 250
LSF+SGSVDELGD AELKLSFFQLGISPQI+ASILMQVLCH+VPSLV+LRKEGLDGHEK
Sbjct: 117 LSFISGSVDELGDLTAELKLSFFQLGISPQILASILMQVLCHVVPSLVKLRKEGLDGHEK 176
Query: 251 IKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTI 310
IKSYIWW+SLGFA+LEAV+VACYSLPYSIYAA+H VKHVMVTA LL CGAMT++WICDTI
Sbjct: 177 IKSYIWWLSLGFAMLEAVVVACYSLPYSIYAATHRVKHVMVTALLLTCGAMTVTWICDTI 236
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
SESGFGQGSSLIICVGILTGYT+TLYKML QL GS+V W P+ML +LGVFT+VTMWAVVV
Sbjct: 237 SESGFGQGSSLIICVGILTGYTDTLYKMLCQLSGSAVSWLPYMLAVLGVFTVVTMWAVVV 296
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
TEGCRK+KLQYYGFKLASAAR+DSP+TEVEPYIPFNINPSGMQPVLTTTYLLA PSILA
Sbjct: 297 TEGCRKIKLQYYGFKLASAARDDSPMTEVEPYIPFNINPSGMQPVLTTTYLLAIPSILAG 356
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
ILGSPFW+HVKEILNPETS+GA PWVYY+IY FFVFLFNIFDI ++
Sbjct: 357 ILGSPFWEHVKEILNPETSLGAAPWVYYSIYGFFVFLFNIFDIANL 402
>gi|224066513|ref|XP_002302117.1| SecY protein [Populus trichocarpa]
gi|222843843|gb|EEE81390.1| SecY protein [Populus trichocarpa]
Length = 552
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/456 (73%), Positives = 377/456 (82%), Gaps = 9/456 (1%)
Query: 1 MEATLLSSHHFTPQLFTTTPVKLGGGHVLADNRFCHPLCTKTFVSVRLSLLDSKRRQVPL 60
MEATL FTP++F P+ + C+PLC K S +++L +S RR+ L
Sbjct: 1 MEATL----GFTPRVFGFKPLSFRDQRTGSKLEECYPLCAKNKFSHKMNLAESGRRRFLL 56
Query: 61 LNRPFLSRANKRYSVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDN 120
NRP + RANK+ S+ SSDQ R Y N + S EA+PPR DD L DV +
Sbjct: 57 RNRPIIFRANKKISINSSDQHRPGYANADVSPLH----EAIPPRSDDGAALLNLLDVNNL 112
Query: 121 ETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG 180
+ +S PKM++NRFLNF R++SV+N+AAESFFKSEIRRRLFVTAVLIVI R+GY+IPLPG
Sbjct: 113 NSLQSPPKMFRNRFLNFGRMNSVINSAAESFFKSEIRRRLFVTAVLIVIGRVGYYIPLPG 172
Query: 181 FDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL 240
FDRRLIP+DYLSFV+GSVDEL DF ELKLSFFQLGISPQI+ASILMQVLCH+VPSLV+L
Sbjct: 173 FDRRLIPRDYLSFVTGSVDEL-DFSTELKLSFFQLGISPQILASILMQVLCHVVPSLVKL 231
Query: 241 RKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGA 300
RKEGLDGHEKIKSYIWWISLGFAI EA+IVACYSLPYS+YAAS VKHVMVTA LLVCGA
Sbjct: 232 RKEGLDGHEKIKSYIWWISLGFAIFEAIIVACYSLPYSVYAASQRVKHVMVTALLLVCGA 291
Query: 301 MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVF 360
MTM+WICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL GS+ WWP+M +LGVF
Sbjct: 292 MTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGSAASWWPYMFAVLGVF 351
Query: 361 TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
TIVTMWAVVVTEGCRK+KLQYYGFKLASAAR+DSPITEVEPYIPFNINPSGMQP+LTTTY
Sbjct: 352 TIVTMWAVVVTEGCRKIKLQYYGFKLASAARDDSPITEVEPYIPFNINPSGMQPLLTTTY 411
Query: 421 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWV 456
LLA PSILA ILGSPFW+ +KEILNPETS+GA PW
Sbjct: 412 LLAVPSILAGILGSPFWERIKEILNPETSIGAEPWA 447
>gi|449444663|ref|XP_004140093.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
[Cucumis sativus]
Length = 494
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/391 (78%), Positives = 351/391 (89%)
Query: 86 VNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLN 145
+NV+A+S ++LE +D + T+ + ++ K + ++NRFLN +RL SVLN
Sbjct: 1 MNVKATSEQCLDLETFSQESNDGDAFLTSSNGTNFDIWKPKSRAFRNRFLNLVRLRSVLN 60
Query: 146 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG 205
NAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF
Sbjct: 61 NAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFT 120
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
E+K+SFFQLGISPQI+ASI+MQVLCHI+PSLV+LRKEGLDG EKIKSYIWW+SLGFAIL
Sbjct: 121 TEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYIWWMSLGFAIL 180
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
EA++++CYSLPYS+Y A+H VKHVMVT+FLLVCGAMT++WICDTISESGFGQGSSLIICV
Sbjct: 181 EALVLSCYSLPYSVYVANHRVKHVMVTSFLLVCGAMTITWICDTISESGFGQGSSLIICV 240
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GILTGYTETLYKMLSQL G +V WWP++L LLG+FT+VTMWAVVVTEGCRK+KLQYYGFK
Sbjct: 241 GILTGYTETLYKMLSQLSGGAVVWWPYVLALLGIFTVVTMWAVVVTEGCRKIKLQYYGFK 300
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
LASAAREDSPITEVEPYIPFNINP+GMQP+LTTTYLLAFPSILAS+L S FW+HVKEILN
Sbjct: 301 LASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILN 360
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
PE+S+GA PWVYY IYA FVFLFNIFDI ++
Sbjct: 361 PESSIGAEPWVYYLIYAVFVFLFNIFDIANL 391
>gi|449489752|ref|XP_004158405.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
[Cucumis sativus]
Length = 463
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/391 (78%), Positives = 351/391 (89%)
Query: 86 VNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLN 145
+NV+A+S ++LE +D + T+ + ++ K + ++NRFLN +RL SVLN
Sbjct: 1 MNVKATSEQCLDLETFSQESNDGDAFLTSSNGTNFDIWKPKSRAFRNRFLNLLRLRSVLN 60
Query: 146 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG 205
NAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF
Sbjct: 61 NAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFT 120
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
E+K+SFFQLGISPQI+ASI+MQVLCHI+PSLV+LRKEGLDG EKIKSYIWW+SLGFAIL
Sbjct: 121 TEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYIWWMSLGFAIL 180
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
EA++++CYSLPYS+Y A+H VKHVMVT+FLLVCGAMT++WICDTISESGFGQGSSLIICV
Sbjct: 181 EALVLSCYSLPYSVYVANHRVKHVMVTSFLLVCGAMTITWICDTISESGFGQGSSLIICV 240
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GILTGYTETLYKMLSQL G +V WWP++L LLG+FT+VTMWAVVVTEGCRK+KLQYYGFK
Sbjct: 241 GILTGYTETLYKMLSQLSGGAVVWWPYVLALLGIFTVVTMWAVVVTEGCRKIKLQYYGFK 300
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
LASAAREDSPITEVEPYIPFNINP+GMQP+LTTTYLLAFPSILAS+L S FW+HVKEILN
Sbjct: 301 LASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILN 360
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
PE+S+GA PWVYY IYA FVFLFNIFDI S+
Sbjct: 361 PESSIGAEPWVYYLIYAVFVFLFNIFDIESL 391
>gi|240254559|ref|NP_180711.4| secY protein transport-like protein [Arabidopsis thaliana]
gi|363805540|sp|F4IQV7.1|SCY2_ARATH RecName: Full=Preprotein translocase subunit SCY2, chloroplastic;
AltName: Full=Protein EMBRYO DEFECTIVE 2289; Flags:
Precursor
gi|330253463|gb|AEC08557.1| secY protein transport-like protein [Arabidopsis thaliana]
Length = 575
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 303/442 (68%), Positives = 369/442 (83%), Gaps = 5/442 (1%)
Query: 38 LCTKTFVSVRLSLLDSKRRQ---VPLLNRPFLSRANKRYSVYSSDQLRSDYVNVEASSAL 94
LC++ + +L S+ RQ + + R L + K +S+ SD+ R D ++ E
Sbjct: 33 LCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTD 92
Query: 95 SVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKS 154
++++E +PP D +SQ N +PK ++NRFL+F+R+SSVLN AAE FFKS
Sbjct: 93 ALDVEIIPPDSQDIRNSQN--SAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKS 150
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
EIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV+ELG+FGAE+KLS FQ
Sbjct: 151 EIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQ 210
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSYIWW+S FAI+EA++VA S
Sbjct: 211 LGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTS 270
Query: 275 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 334
L YS++AA+ VKHVM+T+ LLVCGAMTM+W+CDTISESGFG GSSLIICVGILTGYTET
Sbjct: 271 LQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTET 330
Query: 335 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDS 394
L+KML+Q+ GS W P++LGLLG+FT+VTM+AVVVTEGCRK+KLQYYGFKLASA+RE S
Sbjct: 331 LHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGS 390
Query: 395 PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARP 454
PITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILASILGSPF ++KEILNPE++VGA P
Sbjct: 391 PITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPP 450
Query: 455 WVYYTIYAFFVFLFNIFDIVSI 476
WVYY+IYAFFVFLFNIFDI ++
Sbjct: 451 WVYYSIYAFFVFLFNIFDIANL 472
>gi|356503539|ref|XP_003520565.1| PREDICTED: preprotein translocase subunit secY-like [Glycine max]
Length = 546
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/459 (69%), Positives = 361/459 (78%), Gaps = 23/459 (5%)
Query: 1 MEATLLSSHHFTPQLFTTTPVKLGGGHVLADNRFCHPLCTKTFVSVRLSLLDSKRRQVPL 60
MEAT S +HF P F T P + L + R+ C + R+SL +
Sbjct: 1 MEATRFSPNHFYPHRFQTKP------NALRERRYVK--CING-IGARVSLFTNPAFNAS- 50
Query: 61 LNRPFLSRANKRYSVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDD---EVDSQGLRDV 117
NR + N+ SV SD+LR DY V+ E VP D V S
Sbjct: 51 -NRSLFPKLNRTLSVSFSDRLRGDYARVDE--------EVVPATRGDGGEAVISSSSPSA 101
Query: 118 TDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIP 177
+ T + KP M++NRFLNF RL SV+N AAESFFKSEIRRRLFVTA+LIVISR+GYFIP
Sbjct: 102 NSSGTLQLKPLMFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAMLIVISRVGYFIP 161
Query: 178 LPGFDRRLIPQDYLSFVSGS-VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPS 236
LPGFDRRLIP+DYLSFV+GS VDELGDF AELKLS FQLGISPQI+ASI+MQVLCH+VPS
Sbjct: 162 LPGFDRRLIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIIASIIMQVLCHVVPS 221
Query: 237 LVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLL 296
LV+LRKEGLDGHEKIKSYIWW+S GFAILEA+IVACYSLPYSIYAA++ VKHVMVT+ LL
Sbjct: 222 LVKLRKEGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSILL 281
Query: 297 VCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL 356
VCGAMT++WICDTISESGFGQGSSLIICVGILTGY ETLYKML+QL S+V WWP++L +
Sbjct: 282 VCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAV 341
Query: 357 LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL 416
LG+FTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE SPITEVEPYIPFNINP+GMQPVL
Sbjct: 342 LGIFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREHSPITEVEPYIPFNINPAGMQPVL 401
Query: 417 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPW 455
TT+YLLAFPSILAS+L SPFW+H KE+LNPETSVGA PW
Sbjct: 402 TTSYLLAFPSILASLLRSPFWEHAKEMLNPETSVGAEPW 440
>gi|297822899|ref|XP_002879332.1| hypothetical protein ARALYDRAFT_320901 [Arabidopsis lyrata subsp.
lyrata]
gi|297325171|gb|EFH55591.1| hypothetical protein ARALYDRAFT_320901 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/460 (63%), Positives = 357/460 (77%), Gaps = 28/460 (6%)
Query: 30 ADNRFCH-PLCTKTFVSVRLSLLDSKRRQVPLLNRPFLSRANKRYSVYSSDQLRSDYVNV 88
D C+ PL ++ +++ L++ + + + R + K +S+ SD+LR D ++
Sbjct: 20 GDPSLCYQPLQSRKCLTMNLNMSRREGHFIQMNRRHLFIKEKKSFSINYSDKLRDDSMSS 79
Query: 89 EASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRS-----KPKMYKNRFLNFIRLSSV 143
E ++++E PP DSQ + ++ N T S +PK ++NRFL+F+R+SSV
Sbjct: 80 EEMHVDALDVEITPP------DSQDIH-ISQNSTVSSTLQEDRPKSFRNRFLDFVRISSV 132
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
LN AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV E
Sbjct: 133 LNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVGECSH 192
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
FGAE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSY+ +
Sbjct: 193 FGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYMCMV----- 247
Query: 264 ILEAVIVACYSLPYS-------IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
A++ CYS S I++ HVM+TA LLVCGAMTM+W+CDTISESGFG
Sbjct: 248 ---AIVSLCYSGSISGGLHFASIFSFCSHCPHVMMTASLLVCGAMTMTWLCDTISESGFG 304
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
GSSLIICVGILTGYTETL+KML+Q+ GS W P++LGLLG+FT+VTM+AVVVTEGCRK
Sbjct: 305 HGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRK 364
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+KLQYYGFKLASA+RE SPITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILASILGSPF
Sbjct: 365 IKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPF 424
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
HVKEILNPE++VGA PWVYY+IYAFFVFLFNIFDI ++
Sbjct: 425 LVHVKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANL 464
>gi|4582448|gb|AAD24832.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
Length = 556
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/451 (64%), Positives = 352/451 (78%), Gaps = 8/451 (1%)
Query: 31 DNRFCHP--LCTKTFVSVRLSLLDSKRRQ---VPLLNRPFLSRANKRYSVYSSDQLRSDY 85
DN F LC++ + +L S+ RQ + + R L + K +S+ SD+ R D
Sbjct: 6 DNVFAGDPFLCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDS 65
Query: 86 VNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLN 145
++ E ++++E +PP D +SQ N +PK ++NRFL+F+R+SSVLN
Sbjct: 66 MSSEEMHTDALDVEIIPPDSQDIRNSQN--SAVSNTLQDDRPKSFRNRFLDFVRISSVLN 123
Query: 146 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG 205
AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV E FG
Sbjct: 124 TAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVGECSHFG 183
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
AE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSY+ +++ F
Sbjct: 184 AEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYMCMVAIVFLRY 243
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
I SI++ HVM+T+ LLVCGAMTM+W+CDTISESGFG GSSLIICV
Sbjct: 244 SGSISGGLHFS-SIFSFCSHCPHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICV 302
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GILTGYTETL+KML+Q+ GS W P++LGLLG+FT+VTM+AVVVTEGCRK+KLQYYGFK
Sbjct: 303 GILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFK 362
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
LASA+RE SPITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILASILGSPF ++KEILN
Sbjct: 363 LASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILN 422
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
PE++VGA PWVYY+IYAFFVFLFNIFDI ++
Sbjct: 423 PESTVGAPPWVYYSIYAFFVFLFNIFDIANL 453
>gi|357133818|ref|XP_003568519.1| PREDICTED: preprotein translocase subunit secY-like [Brachypodium
distachyon]
Length = 531
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/375 (68%), Positives = 305/375 (81%), Gaps = 2/375 (0%)
Query: 103 PRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFV 162
PR S G + K Y+NRFL+ RL +V AE+FF+SEIRRRL V
Sbjct: 55 PRASLSATSPG-EPAREGSAVARKAGGYRNRFLDLARLGAVAEGVAETFFRSEIRRRLAV 113
Query: 163 TAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIV 222
TAVLIV+SR+GYF+PLPGFDRRLIP YLSF D+L DF +ELKLSFFQLGIS QI
Sbjct: 114 TAVLIVLSRVGYFVPLPGFDRRLIPDSYLSFAPLPADDLVDFSSELKLSFFQLGISHQIS 173
Query: 223 ASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 282
ASI+MQVLCH++PSL ++RKEGLDGHEKIK YIWW+SLGFAI+ A V+CYSL YSIYAA
Sbjct: 174 ASIVMQVLCHVLPSLEKIRKEGLDGHEKIKGYIWWLSLGFAIVAACTVSCYSLQYSIYAA 233
Query: 283 SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL 342
S+ VKHV++T+FLLV GAM+ +WICDTISESGFG GSSLIICVGILTGYT+TL+KML+Q
Sbjct: 234 SYRVKHVVLTSFLLVLGAMSTTWICDTISESGFGHGSSLIICVGILTGYTDTLHKMLTQF 293
Query: 343 LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR-EDSPITEVEP 401
G+ + WP++LG+ G+F +VTM AV+VTEGCRK+KLQYYGFKLAS AR E+SP TEVEP
Sbjct: 294 SGNMYKCWPYILGVAGIFMMVTMGAVLVTEGCRKIKLQYYGFKLASGARNENSPATEVEP 353
Query: 402 YIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIY 461
YIPFNINP+GMQP+LTT+YLLAFPSI+ASI GSPFW ++KEILNP TSVG PWVYY Y
Sbjct: 354 YIPFNINPTGMQPLLTTSYLLAFPSIMASIFGSPFWGNLKEILNPRTSVGGSPWVYYLTY 413
Query: 462 AFFVFLFNIFDIVSI 476
AF VF+FNIFDI ++
Sbjct: 414 AFLVFVFNIFDIANL 428
>gi|46981327|gb|AAT07645.1| unknown protein [Oryza sativa Japonica Group]
gi|51854415|gb|AAU10794.1| unknown protein [Oryza sativa Japonica Group]
Length = 446
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/357 (71%), Positives = 300/357 (84%), Gaps = 1/357 (0%)
Query: 126 KPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL 185
K Y+NRFL+ RL +V +AAE+ F+SEIRRRL VTAVLI++SR+GYF+PLPGFDRRL
Sbjct: 88 KAAGYRNRFLDLARLGAVAESAAEALFRSEIRRRLAVTAVLILLSRVGYFVPLPGFDRRL 147
Query: 186 IPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGL 245
IP YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGL
Sbjct: 148 IPDSYLSFAPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGL 207
Query: 246 DGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSW 305
DGHEKIK YIWW+SLGFA++ A V+CYSL YSIYAAS+ VKHVM+T+ LV GAMTM+W
Sbjct: 208 DGHEKIKGYIWWLSLGFALVAAFTVSCYSLQYSIYAASYRVKHVMITSLFLVLGAMTMTW 267
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
ICDTISESGFG GSSLIICVGILTGYT+TL+KML+Q G+ WP++LG+ G F +VTM
Sbjct: 268 ICDTISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNWYSCWPYILGIAGTFILVTM 327
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
AV+VTEGCRK+KLQYYGFKLAS AR E SP+TEVEPYIPFNINP+GMQP+LTT+YLLAF
Sbjct: 328 GAVLVTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPFNINPTGMQPLLTTSYLLAF 387
Query: 425 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLL 481
PSI+ASI G+ FW+ +KE LNP+TSVG PWVYY YAF VF+FNIFDIVS L+
Sbjct: 388 PSIMASIFGTQFWESLKETLNPKTSVGGGPWVYYLTYAFLVFVFNIFDIVSYFLILI 444
>gi|115463737|ref|NP_001055468.1| Os05g0397700 [Oryza sativa Japonica Group]
gi|113579019|dbj|BAF17382.1| Os05g0397700 [Oryza sativa Japonica Group]
gi|222631509|gb|EEE63641.1| hypothetical protein OsJ_18458 [Oryza sativa Japonica Group]
Length = 542
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/352 (71%), Positives = 298/352 (84%), Gaps = 1/352 (0%)
Query: 126 KPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL 185
K Y+NRFL+ RL +V +AAE+ F+SEIRRRL VTAVLI++SR+GYF+PLPGFDRRL
Sbjct: 88 KAAGYRNRFLDLARLGAVAESAAEALFRSEIRRRLAVTAVLILLSRVGYFVPLPGFDRRL 147
Query: 186 IPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGL 245
IP YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGL
Sbjct: 148 IPDSYLSFAPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGL 207
Query: 246 DGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSW 305
DGHEKIK YIWW+SLGFA++ A V+CYSL YSIYAAS+ VKHVM+T+ LV GAMTM+W
Sbjct: 208 DGHEKIKGYIWWLSLGFALVAAFTVSCYSLQYSIYAASYRVKHVMITSLFLVLGAMTMTW 267
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
ICDTISESGFG GSSLIICVGILTGYT+TL+KML+Q G+ WP++LG+ G F +VTM
Sbjct: 268 ICDTISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNWYSCWPYILGIAGTFILVTM 327
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
AV+VTEGCRK+KLQYYGFKLAS AR E SP+TEVEPYIPFNINP+GMQP+LTT+YLLAF
Sbjct: 328 GAVLVTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPFNINPTGMQPLLTTSYLLAF 387
Query: 425 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
PSI+ASI G+ FW+ +KE LNP+TSVG PWVYY YAF VF+FNIFDI ++
Sbjct: 388 PSIMASIFGTQFWESLKETLNPKTSVGGGPWVYYLTYAFLVFVFNIFDIANL 439
>gi|326512654|dbj|BAJ99682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/348 (72%), Positives = 301/348 (86%), Gaps = 1/348 (0%)
Query: 130 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 189
++NRFL+ RL +V AAE+FF+SEIRRRL VTAVLIV+SR+GYF+PLPGFDRRLIP
Sbjct: 81 FRNRFLDLARLGAVAEGAAEAFFRSEIRRRLAVTAVLIVLSRVGYFVPLPGFDRRLIPDS 140
Query: 190 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 249
YLSF D+L DF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL ++RKEGLDGHE
Sbjct: 141 YLSFAPLPADDLVDFASELKLSFFQLGISHQISASIVMQVLCHVLPSLEKIRKEGLDGHE 200
Query: 250 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 309
KIKSYIWW+SLGFAI+ A V+CYSL YSIYAAS+ VKHV++T+FLLV GAM+ +WICDT
Sbjct: 201 KIKSYIWWLSLGFAIVAACTVSCYSLQYSIYAASYRVKHVILTSFLLVLGAMSTTWICDT 260
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+ESGFG GSSLIICVGILTGYT TL+KML+Q G+ WP++LG+ G+F +VTM AV+
Sbjct: 261 ITESGFGHGSSLIICVGILTGYTNTLHKMLTQFSGNVHTSWPYILGVAGIFMMVTMGAVL 320
Query: 370 VTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
VTEGCRK+KLQYYGFKLAS+AR E+SP+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 321 VTEGCRKIKLQYYGFKLASSARNENSPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 380
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
ASI SPFW+++KEILNP TS G PWVYY YAFFVF+FNIFDI ++
Sbjct: 381 ASIFRSPFWENLKEILNPMTSAGGSPWVYYLTYAFFVFVFNIFDIANL 428
>gi|242090451|ref|XP_002441058.1| hypothetical protein SORBIDRAFT_09g019570 [Sorghum bicolor]
gi|241946343|gb|EES19488.1| hypothetical protein SORBIDRAFT_09g019570 [Sorghum bicolor]
Length = 517
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/348 (69%), Positives = 297/348 (85%), Gaps = 1/348 (0%)
Query: 130 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 189
Y+NRFL+ RL +V +AE+FF+SEIRRRL VTA LIV+SR+GYFIPLPGFDRRLIP
Sbjct: 88 YRNRFLDLARLGAVAEGSAEAFFRSEIRRRLAVTAALIVLSRVGYFIPLPGFDRRLIPDS 147
Query: 190 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 249
YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 148 YLSFSPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 207
Query: 250 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 309
K+K YIWW+SL FA + A V+CYSL YS+YAAS+ VKH+++T+ LLV GAM+M+WICDT
Sbjct: 208 KLKGYIWWLSLCFATVAAFTVSCYSLQYSVYAASYRVKHIIITSLLLVLGAMSMTWICDT 267
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+ESGFG GSSLIICVGILTGYT+TL+KM++Q G+ WP++LG+ G+F I+TM AV+
Sbjct: 268 ITESGFGHGSSLIICVGILTGYTDTLHKMITQFSGNFSYCWPYVLGVAGIFMILTMGAVL 327
Query: 370 VTEGCRKVKLQYYGFKLAS-AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
VTEGCRK+KLQYYGFKLAS A E +P+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 328 VTEGCRKIKLQYYGFKLASGAGNESTPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 387
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
ASI SPFW++++EILNP+TS G PWVYY+ YAF VF+FNIFDI ++
Sbjct: 388 ASIFASPFWENLREILNPKTSTGGTPWVYYSTYAFLVFVFNIFDIANL 435
>gi|125552246|gb|EAY97955.1| hypothetical protein OsI_19872 [Oryza sativa Indica Group]
Length = 518
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/369 (67%), Positives = 296/369 (80%), Gaps = 18/369 (4%)
Query: 126 KPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL 185
K Y+NRFL+ RL +V +AAE+ F+SEIRRRL +TAVLI++SR+GYF+PLPGFDRRL
Sbjct: 47 KAAGYRNRFLDLARLGAVAESAAEALFRSEIRRRLAITAVLILLSRVGYFVPLPGFDRRL 106
Query: 186 IPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVL--------------- 230
IP YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVL
Sbjct: 107 IPYSYLSFAPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLFYPLFGPALLFSNGN 166
Query: 231 --CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKH 288
CH++PSL +LRKEGLDGHEKIK YIWW+SLGFA++ A V+CYSL YSIYAAS+ VKH
Sbjct: 167 VLCHVLPSLEKLRKEGLDGHEKIKGYIWWLSLGFALVAAFTVSCYSLQYSIYAASYRVKH 226
Query: 289 VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVR 348
VM+T+ LV GAMTM+WICDTISESGFG GSSLIICVGILTGYT+TL+KML+Q G+
Sbjct: 227 VMITSLFLVLGAMTMTWICDTISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNWYS 286
Query: 349 WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNI 407
W ++LG+ G F +VTM AV+VTEGCRK+KLQYYGFKLAS AR E SP+TEVEPYIPFNI
Sbjct: 287 CWHYILGIAGTFILVTMGAVLVTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPFNI 346
Query: 408 NPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFL 467
NP+GMQP+LTT+YLLAFPSI+ASI G+ FW+ +KE LNP+TSVG PW YY YAF VF+
Sbjct: 347 NPTGMQPLLTTSYLLAFPSIMASIFGTQFWESLKETLNPKTSVGGGPWAYYLTYAFLVFV 406
Query: 468 FNIFDIVSI 476
FNIFDI ++
Sbjct: 407 FNIFDIANL 415
>gi|239985657|ref|NP_001152011.1| preprotein translocase secY subunit [Zea mays]
gi|195651831|gb|ACG45383.1| preprotein translocase secY subunit [Zea mays]
gi|238006486|gb|ACR34278.1| unknown [Zea mays]
gi|413945260|gb|AFW77909.1| preprotein translocase secY subunit [Zea mays]
Length = 524
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/352 (69%), Positives = 297/352 (84%), Gaps = 1/352 (0%)
Query: 126 KPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL 185
K Y+NRFL+ RL +V AAE+FF+SEIRRRL VTA LIV+SR+GYFIPLPGFDRRL
Sbjct: 70 KSTGYRNRFLDLARLGAVAEGAAEAFFRSEIRRRLAVTAALIVLSRVGYFIPLPGFDRRL 129
Query: 186 IPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGL 245
IP YLSF + D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGL
Sbjct: 130 IPDSYLSFSALPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGL 189
Query: 246 DGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSW 305
DGHEK+K YIWW+SL FA + A V+C+SL YS+YAAS+ VKHV++T+ LLV GAM+M+W
Sbjct: 190 DGHEKLKGYIWWLSLWFATVAAFTVSCFSLQYSVYAASYRVKHVIITSLLLVLGAMSMTW 249
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
ICDTI+E GFG GSSLIICVGILTGYT+TL+KM++Q G+ WP++LG+ G+F I+TM
Sbjct: 250 ICDTITEFGFGHGSSLIICVGILTGYTDTLHKMITQFSGNFSYCWPYILGVAGIFMILTM 309
Query: 366 WAVVVTEGCRKVKLQYYGFKLAS-AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
AV+VTEGCRK+KLQYYGFKLAS A E SP+TEVEPYIPFNINP+GMQP+LTT+YLLAF
Sbjct: 310 GAVLVTEGCRKIKLQYYGFKLASGAGNESSPVTEVEPYIPFNINPTGMQPLLTTSYLLAF 369
Query: 425 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
PSI+ASI SPFW++++EILNP+TS G PWVYY YAF VF+FNIFDI ++
Sbjct: 370 PSIMASIFASPFWENLREILNPKTSTGGSPWVYYLTYAFLVFIFNIFDIANL 421
>gi|356570572|ref|XP_003553459.1| PREDICTED: preprotein translocase subunit secY-like [Glycine max]
Length = 338
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/349 (64%), Positives = 256/349 (73%), Gaps = 20/349 (5%)
Query: 1 MEATLLSSHHFTPQLFTTTPVKLGGGHVLADNRFCHPLCTKTFVSVRLSLLDSKR-RQVP 59
MEAT S +HF P F T P + L + R+ C V R+ L + P
Sbjct: 1 MEATRFSPNHFYPHCFLTKP------NALRERRYVK--CING-VGTRVYLFTNPAFNNAP 51
Query: 60 LLNRPFLSRANKRYSVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDDEVDSQGLRD--- 116
NR + N+ SV SD+LR DYV V+A + E VP + L
Sbjct: 52 --NRSLFPKLNRTLSVSFSDRLRDDYVRVDAPRSK----EVVPATRGGDGGEAILASSPS 105
Query: 117 VTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFI 176
++ T + KP M++NRFLNF RL SV+N AAESFFKSEIRRRLFVTAVLIVISR+GYFI
Sbjct: 106 ADNSGTLQLKPLMFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFI 165
Query: 177 PLPGFDRRLIPQDYLSFVSGS-VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVP 235
PLPGFDRRLIP+DYLSFV+GS VDELGDF AELKLS FQLGISPQI+ I +QVLCH+VP
Sbjct: 166 PLPGFDRRLIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIINHIHVQVLCHVVP 225
Query: 236 SLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFL 295
SLV LRKEGLDGHEKIKSYIWW+S GFAILEA+IVACYSLPYSIYAA++ VKHVMVT+ L
Sbjct: 226 SLVNLRKEGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSVL 285
Query: 296 LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLG 344
LVCGAMT++WICDTISESGFGQGSSLIICVGILTGY ETLYKML+QL G
Sbjct: 286 LVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSG 334
>gi|302804522|ref|XP_002984013.1| hypothetical protein SELMODRAFT_180624 [Selaginella moellendorffii]
gi|300148365|gb|EFJ15025.1| hypothetical protein SELMODRAFT_180624 [Selaginella moellendorffii]
Length = 571
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/387 (42%), Positives = 252/387 (65%), Gaps = 20/387 (5%)
Query: 101 VPPRLD---DEVDSQGLRDVTDNET-----FRSKPKMYKNRFLNFIRLSSVLNNAAESFF 152
+P ++D DEV S+ L + P+ Y N+F+ +++L SV+N+AA +FF
Sbjct: 85 IPSQIDISPDEVSSKNLGGGGGESLLSGESIKHVPRSYSNKFIRWVKLGSVINDAAMAFF 144
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 212
KSE+RRR F+T +L+++ R G F+PLPGF+ R +P ++L + + E G F E K+SF
Sbjct: 145 KSEVRRRTFITIILLMVCRAGQFVPLPGFNHRTMPSNFLGSTALTASE-GAFLKEPKISF 203
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
F LG+SP I AS ++ VLC P ++RKEG +KIKSY WW++L ++++A++++
Sbjct: 204 FHLGLSPYICASTVIHVLCSWYPPFQKMRKEG--EIDKIKSYTWWLTLSCSVIQALLLSY 261
Query: 273 YSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+L Y+ + S KH + TA LL G+M + WI I+ESGFGQGS+LIIC+GIL
Sbjct: 262 ATLQYATAFFFSSRFKHFLFTASLLTSGSMLLEWISRRITESGFGQGSTLIICMGILVSS 321
Query: 332 TETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+++L M+ S+L S +W P +L +GVF +T AV+VTEG R +KLQ+YGF
Sbjct: 322 SQSLCNMVISFSRLDFS--KWGPALLLYVGVFLTMTACAVLVTEGRRIIKLQFYGFDRFP 379
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE- 447
++ D I EVEPYIPF+INP+GM PV ++YL+A PS LA+IL +PF + ++ +LNP
Sbjct: 380 SSGGDG-IPEVEPYIPFDINPNGMLPVYMSSYLMAVPSFLANILKTPFLRQLQVLLNPTL 438
Query: 448 -TSVGARPWVYYTIYAFFVFLFNIFDI 473
+ GARPW+Y+T+ A + F++ D+
Sbjct: 439 PPAPGARPWLYHTLTALLILTFSVLDV 465
>gi|226503621|ref|NP_001140450.1| uncharacterized protein LOC100272509 [Zea mays]
gi|194699564|gb|ACF83866.1| unknown [Zea mays]
Length = 280
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/177 (70%), Positives = 153/177 (86%), Gaps = 1/177 (0%)
Query: 301 MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVF 360
M+M+WICDTI+E GFG GSSLIICVGILTGYT+TL+KM++Q G+ WP++LG+ G+F
Sbjct: 1 MSMTWICDTITEFGFGHGSSLIICVGILTGYTDTLHKMITQFSGNFSYCWPYILGVAGIF 60
Query: 361 TIVTMWAVVVTEGCRKVKLQYYGFKLASAA-REDSPITEVEPYIPFNINPSGMQPVLTTT 419
I+TM AV+VTEGCRK+KLQYYGFKLAS A E SP+TEVEPYIPFNINP+GMQP+LTT+
Sbjct: 61 MILTMGAVLVTEGCRKIKLQYYGFKLASGAGNESSPVTEVEPYIPFNINPTGMQPLLTTS 120
Query: 420 YLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
YLLAFPSI+ASI SPFW++++EILNP+TS G PWVYY YAF VF+FNIFDI ++
Sbjct: 121 YLLAFPSIMASIFASPFWENLREILNPKTSTGGSPWVYYLTYAFLVFIFNIFDIANL 177
>gi|17065028|gb|AAL32668.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
gi|20260012|gb|AAM13353.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
Length = 253
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 167/221 (75%), Gaps = 5/221 (2%)
Query: 38 LCTKTFVSVRLSLLDSKRRQ---VPLLNRPFLSRANKRYSVYSSDQLRSDYVNVEASSAL 94
LC++ + +L S+ RQ + + R L + K +S+ SD+ R D ++ E
Sbjct: 33 LCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTD 92
Query: 95 SVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKS 154
++++E +PP D +SQ N +PK ++NRFL+F+R+SSVLN AAE FFKS
Sbjct: 93 ALDVEIIPPDSQDIRNSQN--SAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKS 150
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
EIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV+ELG+FGAE+KLS FQ
Sbjct: 151 EIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQ 210
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
LG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSY+
Sbjct: 211 LGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYM 251
>gi|302753408|ref|XP_002960128.1| hypothetical protein SELMODRAFT_74191 [Selaginella moellendorffii]
gi|300171067|gb|EFJ37667.1| hypothetical protein SELMODRAFT_74191 [Selaginella moellendorffii]
Length = 565
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 225/353 (63%), Gaps = 20/353 (5%)
Query: 127 PKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI 186
P+ Y N+F+ +++L SV+N+AA +FFKSE+RRR F+T +L+++ R G F+PLPGF+ R +
Sbjct: 121 PRSYSNKFIRWVKLGSVINDAAMAFFKSEVRRRTFITIILLMVCRAGQFVPLPGFNHRTM 180
Query: 187 PQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGL 245
P ++L + + E G F E K+SFF LG+SP I AS ++ V +VPS+ + K
Sbjct: 181 PSNFLGSTALTASE-GAFLKEPKISFFHLGLSPYICASTVIHVPSLFLVPSIPKDAK--- 236
Query: 246 DGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSW 305
G + + ++S A L +++ C+ +++ ++ ++ A LL + +
Sbjct: 237 -GRRNRQDKVIYVSDRIA-LTVLLLTCF-----LHSWWLTLSCSVIQALLLSYATLQYAT 289
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTI 362
D I+ESGFGQGS+LIIC+GIL +++L M+ S+L S +W P +L +GVF
Sbjct: 290 ASDLITESGFGQGSTLIICMGILVSSSQSLCNMVISFSRLDFS--KWGPALLLYVGVFLT 347
Query: 363 VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 422
+T AV+VTEG R +KLQ+YGF ++ D I EVEPYIPF+INP+GM PV ++YL+
Sbjct: 348 MTACAVLVTEGRRIIKLQFYGFDRFPSSGGDG-IPEVEPYIPFDINPNGMLPVYMSSYLM 406
Query: 423 AFPSILASILGSPFWQHVKEILNPE--TSVGARPWVYYTIYAFFVFLFNIFDI 473
A PS LA+IL +PF + ++ +LNP + GARPW+Y+T+ A + F++ D+
Sbjct: 407 AVPSFLANILKTPFLRRLQVLLNPTLPPAPGARPWLYHTLTALLILTFSVLDV 459
>gi|413945259|gb|AFW77908.1| hypothetical protein ZEAMMB73_730962 [Zea mays]
Length = 201
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 107/126 (84%)
Query: 130 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 189
Y+NRFL+ RL +V AAE+FF+SEIRRRL VTA LIV+SR+GYFIPLPGFDRRLIP
Sbjct: 74 YRNRFLDLARLGAVAEGAAEAFFRSEIRRRLAVTAALIVLSRVGYFIPLPGFDRRLIPDS 133
Query: 190 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 249
YLSF + D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 134 YLSFSALPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 193
Query: 250 KIKSYI 255
K+K Y+
Sbjct: 194 KLKGYM 199
>gi|56751892|ref|YP_172593.1| preprotein translocase subunit SecY [Synechococcus elongatus PCC
6301]
gi|81301023|ref|YP_401231.1| preprotein translocase subunit SecY [Synechococcus elongatus PCC
7942]
gi|61242549|sp|P0A4H0.1|SECY_SYNE7 RecName: Full=Protein translocase subunit SecY
gi|61242553|sp|P0A4H1.1|SECY_SYNP6 RecName: Full=Protein translocase subunit SecY
gi|282208|pir||S27155 preprotein translocase secY - Synechococcus sp
gi|47618|emb|CAA48194.1| SecY protein [Synechococcus elongatus PCC 7942]
gi|2446908|dbj|BAA22467.1| preprotein translocase SecY subunit [Synechococcus elongatus PCC
6301]
gi|56686851|dbj|BAD80073.1| preprotein translocase SecY subunit [Synechococcus elongatus PCC
6301]
gi|81169904|gb|ABB58244.1| protein translocase subunit secY/sec61 alpha [Synechococcus
elongatus PCC 7942]
Length = 439
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 166/338 (49%), Gaps = 26/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 376 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + L+P G PW+Y Y + F+ F
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYF 333
>gi|164686547|ref|ZP_02210575.1| hypothetical protein CLOBAR_00114 [Clostridium bartlettii DSM
16795]
gi|164604416|gb|EDQ97881.1| preprotein translocase, SecY subunit [Clostridium bartlettii DSM
16795]
Length = 422
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 180/357 (50%), Gaps = 37/357 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SV 198
+L+ +S+ ++RRR+ T ++I+I RIG IP+PG D +I + VSG ++
Sbjct: 1 MLSKIKQSWKVKDVRRRILYTLMMILIFRIGTTIPVPGVDTSIISK----LVSGNSLLAL 56
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA + F LGI P I ASI++Q+L SL +L+K G +G +K+ Y +
Sbjct: 57 YNMFTGGAFSNFTLFALGIGPYITASIIIQLLTVGFESLKELQKSGEEGRKKMNMYTRYT 116
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+L AI++AV + + ++ S ++ + L+ +M + W+ D I+E G G G
Sbjct: 117 ALVLAIIQAVGITLGVVKGAL--KSDNIFFITTVIITLIAASMILMWMGDRITEKGLGNG 174
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKV 377
SS+II VGI++ + +++ + +++ W ++ +L + ++T+ V + E RK+
Sbjct: 175 SSIIIFVGIISRIPTDIISVVNSVQSGTIKLW--LVIILAIIMLITITLVTFINEAVRKI 232
Query: 378 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+QY G KL +IP +N SG+ P++ + LLAFP +A +G
Sbjct: 233 PVQYAKKVVGRKLYGGQNS---------HIPMKVNQSGVMPIIFASSLLAFPQTIALFMG 283
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
V L+ +G W+Y ++ + F+ F YT TI+ V+D
Sbjct: 284 ENAQNFVSTYLSTSGDIGF--WIYRSLEVLLIVFFSYF------YT---TISFNVDD 329
>gi|126697660|ref|YP_001086557.1| preprotein translocase subunit SecY [Clostridium difficile 630]
gi|254973751|ref|ZP_05270223.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-66c26]
gi|255091141|ref|ZP_05320619.1| preprotein translocase SecY subunit [Clostridium difficile CIP
107932]
gi|255099252|ref|ZP_05328229.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-63q42]
gi|255305035|ref|ZP_05349207.1| preprotein translocase SecY subunit [Clostridium difficile ATCC
43255]
gi|255312795|ref|ZP_05354378.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-76w55]
gi|255515554|ref|ZP_05383230.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-97b34]
gi|255648649|ref|ZP_05395551.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-37x79]
gi|260681866|ref|YP_003213151.1| preprotein translocase SecY subunit [Clostridium difficile CD196]
gi|260685464|ref|YP_003216597.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
gi|306518771|ref|ZP_07405118.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-32g58]
gi|384359419|ref|YP_006197271.1| preprotein translocase SecY subunit [Clostridium difficile BI1]
gi|423081676|ref|ZP_17070278.1| preprotein translocase, SecY subunit [Clostridium difficile
002-P50-2011]
gi|423085170|ref|ZP_17073625.1| preprotein translocase, SecY subunit [Clostridium difficile
050-P50-2011]
gi|423089485|ref|ZP_17077843.1| preprotein translocase, SecY subunit [Clostridium difficile
70-100-2010]
gi|115249097|emb|CAJ66908.1| Preprotein translocase SecY subunit [Clostridium difficile 630]
gi|260208029|emb|CBA60223.1| preprotein translocase SecY subunit [Clostridium difficile CD196]
gi|260211480|emb|CBE01614.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
gi|357550254|gb|EHJ32079.1| preprotein translocase, SecY subunit [Clostridium difficile
002-P50-2011]
gi|357550502|gb|EHJ32316.1| preprotein translocase, SecY subunit [Clostridium difficile
050-P50-2011]
gi|357558095|gb|EHJ39602.1| preprotein translocase, SecY subunit [Clostridium difficile
70-100-2010]
Length = 422
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 171/338 (50%), Gaps = 28/338 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SV 198
+L+ +++ +R+++ T ++IVI RIG IP+PG D +I + V G S+
Sbjct: 1 MLSKLKQAWKIKAVRKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQK----MVGGNSLLSL 56
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA S F LGISP I ASI++Q+L SL +L+K G +G +KI Y +
Sbjct: 57 YNMFTGGAFSNFSLFALGISPYITASIIIQLLTVGFESLAELQKSGEEGKKKINKYTKYT 116
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+L A+++A+ + + ++ S+SV + LV +M + WI D I+E G G G
Sbjct: 117 ALALAVVQALGITLGIVRSALI--SNSVFFITTVVITLVSASMLVMWIGDKITEKGIGNG 174
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKV 377
SS+II GI++ + K+ Q+ V P+++ +L V ++T+ V + E RK+
Sbjct: 175 SSVIIFAGIISRIPTDVIKISQQVKSGEVA--PWVIVILAVVILLTVTGVTFIQEATRKI 232
Query: 378 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+QY G K+ +IP +N SG+ P++ + LLAFP +A +G
Sbjct: 233 PVQYAKRVVGRKMYGGQ---------SSHIPMKVNQSGVMPIIFASSLLAFPQTIAMFMG 283
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V++ L+ T G W Y +I + F+ F
Sbjct: 284 PNAQAFVQKYLSMATEQGF--WTYRSIEILLIIFFSYF 319
>gi|255654182|ref|ZP_05399591.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-23m63]
gi|296449779|ref|ZP_06891548.1| preprotein translocase subunit SecY [Clostridium difficile NAP08]
gi|296877843|ref|ZP_06901865.1| preprotein translocase subunit SecY [Clostridium difficile NAP07]
gi|296261377|gb|EFH08203.1| preprotein translocase subunit SecY [Clostridium difficile NAP08]
gi|296431143|gb|EFH16968.1| preprotein translocase subunit SecY [Clostridium difficile NAP07]
Length = 422
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 171/338 (50%), Gaps = 28/338 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SV 198
+L+ +++ +R+++ T ++IVI RIG IP+PG D +I + V G S+
Sbjct: 1 MLSKLKQAWKIKAVRKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQK----MVGGNSLLSL 56
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA S F LGISP I ASI++Q+L SL +L+K G +G +KI Y +
Sbjct: 57 YNMFTGGAFSNFSLFALGISPYITASIIIQLLTVGFESLAELQKSGEEGKKKINKYTKYT 116
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+L A+++A+ + + ++ S+SV + LV +M + WI D I+E G G G
Sbjct: 117 ALALAVVQALGITLGIVRSALI--SNSVFFITTVVITLVSASMLVMWIGDKITEKGIGNG 174
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKV 377
SS+II GI++ + K+ Q+ V P+++ +L V ++T+ V + E RK+
Sbjct: 175 SSVIIFAGIISRIPTDVIKISQQVKSGQVA--PWVIVILAVVILLTVTGVTFIQEATRKI 232
Query: 378 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+QY G K+ +IP +N SG+ P++ + LLAFP +A +G
Sbjct: 233 PVQYAKRVVGRKMYGGQ---------SSHIPMKVNQSGVMPIIFASSLLAFPQTIAMFMG 283
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V++ L+ T G W Y +I + F+ F
Sbjct: 284 PNAQAFVQKYLSMATEQGF--WTYRSIEILLIIFFSYF 319
>gi|429758185|ref|ZP_19290704.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
181 str. F0379]
gi|429173844|gb|EKY15353.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
181 str. F0379]
Length = 430
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 169/341 (49%), Gaps = 29/341 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A++F ++RR+L T ++ + R+G FIP PG D + + + S+ +L
Sbjct: 1 MLSAFAQAFRTPDLRRKLLFTLFIMAMFRLGSFIPTPGVDSQAVTKCIAQQSDASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQMKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ IL++ + + +++A S+SV ++ ++ G + W+ + I+E
Sbjct: 121 IFLGILQSTTIISLARSGNLFAGCSEKIIPSNSVWTFLLMMIVMTAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVV 370
G G G SL+I +T +M SQLL G S +W + ++G+ +V++ V +
Sbjct: 181 RGIGNGMSLLI-------FTSITARMPSQLLTIGQSGKWGA-VFAIIGLMLVVSIVVVYL 232
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ R++ +QY K R+ T YIP IN SG+ PV+ + LLAFP +LA
Sbjct: 233 EQAQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSLLAFPPMLAQ 287
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GS Q K + + W Y T YA F F
Sbjct: 288 -FGS---QDSKWVQWISANFHQDAWPYLTSYALLTLFFTFF 324
>gi|434391761|ref|YP_007126708.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
7428]
gi|428263602|gb|AFZ29548.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
7428]
Length = 437
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 21/335 (6%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +RRRL VT +++++R+G F+P+PG +R L Q S + L
Sbjct: 9 TAQETFMQMAQAAGLRRRLLVTVGILILARLGVFLPVPGINRALFAQASQSGNNALFGFL 68
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 258
F G L F LGI P I ASI++Q+L +P+L L+K EG G KI ++
Sbjct: 69 DIFSGGGLSTLGVFALGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRKISQITRYV 128
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
SLG+AIL+++ +A + L YA + V TA L G+M + W + I+E G G G
Sbjct: 129 SLGWAILQSIFIAAFWL--QPYAFNPGPIFVAQTAIALTAGSMFIMWASELITERGVGNG 186
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
+SL+I V I+ L ++ S ++ LL VF ++ + V V EG R++
Sbjct: 187 ASLLIFVNIVASLPRALGDTIAFAQTGSREAVGGVVVLLLVFLVMIVGIVFVQEGTRRI- 245
Query: 379 LQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ SA R+ E Y+P +N G+ P++ + +L P+ LAS + F
Sbjct: 246 ------PIISARRQVGRRFFQEQRSYLPLRLNQGGVMPIIFASAVLILPASLASFTRNEF 299
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+P G PWVY Y + F+ F
Sbjct: 300 LLRIANYLSPN---GPTPWVYALAYLVLILFFSYF 331
>gi|262197168|ref|YP_003268377.1| preprotein translocase subunit SecY [Haliangium ochraceum DSM
14365]
gi|262080515|gb|ACY16484.1| preprotein translocase, SecY subunit [Haliangium ochraceum DSM
14365]
Length = 448
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 163/333 (48%), Gaps = 32/333 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 209
E+R+R+ T ++ + RIG F+ LPG +R + L G+ LG F GA +
Sbjct: 13 ELRKRILFTLGMLAVYRIGIFVTLPGVNR--VEMQNLISTGGTGTFLGLFSVFSGGALEQ 70
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
LS F LGI P I ASI++Q+L +VP L QL KEG G +KI Y + ++G +I++AV
Sbjct: 71 LSIFALGIMPYISASIILQLLTVVVPKLDQLNKEGEQGRKKINQYTRYGTIGLSIVQAVF 130
Query: 270 VACY----SLPYSIYAASHSVK------HVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
++ + Y+A V H+M T L G + W+ + I+E G G G
Sbjct: 131 LSSWLVGLGRGGGGYSAGEVVNDPGMWFHIM-TVLTLTTGTAFLMWLGEQITERGIGNGI 189
Query: 320 SLIICVGILTGYTETLYKMLSQ-LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I GI+ G + L ++ + G + +L L+ V TI T+ R++
Sbjct: 190 SLLIFAGIVAGMPDALTQLFGRSSTGDYDLFMLLVLLLIAVGTIATI--CYFERAHRRIP 247
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY + + + ++P IN SG+ P + + +L FP+ +A+++G+P+ Q
Sbjct: 248 VQYTKRMVGRKMYAGT-----QTHLPLKINVSGVIPPIFASSILMFPAQIANMVGTPWMQ 302
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V LNP W Y IY + F F
Sbjct: 303 SVANALNPND------WRYNVIYVGLIVFFTFF 329
>gi|218961413|ref|YP_001741188.1| preprotein translocase secY subunit, essential membrane protein
[Candidatus Cloacamonas acidaminovorans]
gi|167730070|emb|CAO80982.1| preprotein translocase secY subunit, essential membrane protein
[Candidatus Cloacamonas acidaminovorans str. Evry]
Length = 437
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 209
++++++ TA+ +V+ R+G FIPLPG + + + G G G +
Sbjct: 13 DLKKKILFTALFLVLYRLGSFIPLPGVNATALKAFFEGAREGGNTLFGLLDLFVGGNFER 72
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F LGI P I ASI++Q+L I+P +LRKEG DG +K+ + ++ A A+
Sbjct: 73 ASVFALGIMPYITASIVIQLLGSIIPYFEKLRKEGADGQKKLNQITRYGTVALAAFNALT 132
Query: 270 VACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + +L + + + H + LV G M + WI + I+E G G G SLII GI
Sbjct: 133 ITMWLTNLSGGVVPRPNFLFH-LTGIITLVTGTMIVMWIGEQITEHGIGNGISLIIFAGI 191
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ Y E +M+ ++ W + ++ + +VT + VTE RK+ +QY A
Sbjct: 192 IARYPEGFVRMIQKISVDPSYTWKAIAAVV-LMVLVTAAVIFVTEAVRKIPVQY-----A 245
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKEILN 445
YIP +N +G+ P++ +L FP+ +A++LG SPFW +K L+
Sbjct: 246 KRIVGRRVYGGQSTYIPLRVNTAGVIPIIFAQSVLMFPATIAALLGGDSPFWTTLKNWLS 305
Query: 446 P 446
P
Sbjct: 306 P 306
>gi|428320034|ref|YP_007117916.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
nigro-viridis PCC 7112]
gi|428243714|gb|AFZ09500.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
nigro-viridis PCC 7112]
Length = 434
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 20/333 (6%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R R+ VT L+++ R+G +P+PG DR Q+ + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVQNSPLIGFLDL 69
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++SL
Sbjct: 70 FSGGGLSALGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKISQITRYVSL 129
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
G+AIL+++ +A + P+ A S + + TA L G+M + W+ + ++E G G G+S
Sbjct: 130 GWAILQSIGIAIWVSPF---AQSPAPLFIAQTALALTAGSMFVMWVSELVTERGIGNGAS 186
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
L+I + I++ +L + + ++ LL VF + + V V EG R++ +
Sbjct: 187 LLIFINIVSVLPRSLGQTFELAQSGDTQVVGRVVVLLLVFLVTIVGIVFVQEGTRRIPI- 245
Query: 381 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
SA R+ E Y+P +N G+ P++ + +L PS LA L +PF
Sbjct: 246 ------ISARRQVGRKVYRESRSYLPLRLNQGGVMPIIFASSVLIVPSFLAQSLNNPFLV 299
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V +L+P G PW Y Y + F+ F
Sbjct: 300 QVANVLSPN---GPAPWAYALFYLTLILFFSYF 329
>gi|225165493|ref|ZP_03727319.1| preprotein translocase, SecY subunit [Diplosphaera colitermitum
TAV2]
gi|224800270|gb|EEG18674.1| preprotein translocase, SecY subunit [Diplosphaera colitermitum
TAV2]
Length = 520
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 35/357 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
LS+V + A S E+R R+F T L+ ++R+G IPLPG D R + + V+G+
Sbjct: 17 LSAVFSAFANSLKIPELRSRIFYTLALLFVARVGAHIPLPGLDPRPLEAFFADQVTGAGG 76
Query: 200 ELGDF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKS 253
L GA +K + LGI P I ASI+ Q++ +VPSL +L++EG G +K+
Sbjct: 77 ALVGLYNMFTGGALMKGAVCALGIMPYISASIIFQLMTAVVPSLARLQQEGDVGRQKLSQ 136
Query: 254 YIWWISLGFAILE-AVIVACYSLPYSIYAASHSVKH------------VMVTAFLLVCGA 300
Y + ++ +++ A+++ P ++ + + ++ + + G
Sbjct: 137 YTRYATVLICLIQGALLILALENPTQLFGEGYDIARYGEIVLVDRTWFLISSVIFMTAGT 196
Query: 301 MTMSWICDTISESGFGQGSSLIICVGILT---GYTETLYKMLSQLLGS---SVRWWPFML 354
M ++W+ + I++ G G G SL+I +GI++ G TL+ +L +G+ S+ FM+
Sbjct: 197 MLLTWLGEQITQRGIGNGISLLITIGIISDLPGAMGTLWTLLRAPVGTQGISMISLTFMV 256
Query: 355 GLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQP 414
L F VTM ++V +G RK+ +QY A + + ++P +N SG+ P
Sbjct: 257 IL---FFAVTMGIIMVVQGQRKIPVQY-----AKRVVGNKVMGGQNSFLPLKVNYSGVMP 308
Query: 415 VLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V+ + +L FP + LG+ F ++ ++ ++ WVYY + F+ F
Sbjct: 309 VIFASAILLFPQQIFRYLGAAF--NLPFLIEFSNNLMRGHWVYYVTMTLLILFFSYF 363
>gi|334120591|ref|ZP_08494670.1| preprotein translocase, SecY subunit [Microcoleus vaginatus FGP-2]
gi|333456193|gb|EGK84828.1| preprotein translocase, SecY subunit [Microcoleus vaginatus FGP-2]
Length = 434
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 36/341 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 193
A E+F + + +R R+ VT L+++ R+G +P+PG DR Q+ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVENSPLIGFLDL 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
SG G L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 70 FSG--------GGLSALGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
++SLG+AIL++V +A + P++ A + TA L G+M + W+ + ++E
Sbjct: 122 QITRYVSLGWAILQSVGIAIWVSPFAQAPAPLFIAQ---TALALTAGSMFVMWVSELVTE 178
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I + I++ +L + + ++ LL VF + + V V E
Sbjct: 179 RGIGNGASLLIFINIVSVLPRSLGQTFELAQSGDTQVVGRVVVLLLVFLVTIVGIVFVQE 238
Query: 373 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 239 GTRRIPI-------ISARRQVGRKVYRESRSYLPLRLNQGGVMPIIFASSVLIVPSFLAQ 291
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L +PF V +L+P G PW Y Y + F+ F
Sbjct: 292 SLNNPFLVQVANVLSPN---GPAPWAYALFYLTLILFFSYF 329
>gi|289423654|ref|ZP_06425453.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
653-L]
gi|429727991|ref|ZP_19262737.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
VPI 4330]
gi|289155904|gb|EFD04570.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
653-L]
gi|429150848|gb|EKX93742.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
VPI 4330]
Length = 422
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+LN ++ +IR++L T ++I++ R+G IP+PG D +I + + +
Sbjct: 1 MLNKFKQALQIKDIRKKLVFTFLMIIVFRMGTTIPVPGIDTSIIKNMVANNSLLGLYNMF 60
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA + F LGI P I ASI++Q+L SL +L+K G +G +KI Y + +LG
Sbjct: 61 SGGAFSNFTIFALGIGPYITASIIIQLLTAGFESLKELQKSGEEGKKKINKYTRFTALGL 120
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
A+++A+ + + ++ +S + LV +M + W+ D I+E G G GSS++
Sbjct: 121 AVIQAIGITLGIVRRALKV--NSPFFIFTVIITLVAASMMVMWLGDRITEKGLGNGSSVL 178
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY- 381
I VGI++ T +SQ + WP + L+ V I + E RK+ +QY
Sbjct: 179 IFVGIIS-RTPIDIIAISQKTSQGIIKWPAIAVLVVVILITITGVTFINESTRKIPVQYA 237
Query: 382 ---YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
G K+ DS +IP +N SG+ P++ + +LA P +A +LG P Q
Sbjct: 238 KRVVGRKMYGG---DS------SHIPMKVNQSGVMPIIFASSILALPQTVA-LLGGPKMQ 287
Query: 439 H-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V + N T G W Y +I + LF+ F
Sbjct: 288 AIVNNLFNMSTDRGF--WTYRSIEIVLIVLFSYF 319
>gi|227501154|ref|ZP_03931203.1| possible preprotein translocase subunit SecY [Anaerococcus
tetradius ATCC 35098]
gi|227216739|gb|EEI82140.1| possible preprotein translocase subunit SecY [Anaerococcus
tetradius ATCC 35098]
Length = 424
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 165/331 (49%), Gaps = 16/331 (4%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
++ AA+ + EIR+R + T +++V+ R+G IP+P D + + Y + VD L
Sbjct: 4 IIKKAAK---EEEIRKRFYFTLLMLVVYRLGNNIPIPFIDSKALADAYNNIQGTLVDYLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G LS F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLSVVIPRLEELSREGEQGRKTIQKYTRYVTI 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
G AI +A+ + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G+S
Sbjct: 121 GLAIFQAIAITNGLYGAALSSATGFQKIVM--NIVLIGGTMFVTWMGETITEKGLGNGTS 178
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
LII +GI+ + T+ + L + ++ + + + + V+++EG RKV +Q
Sbjct: 179 LIIFMGIIASFPRTIARWKQGLHYDTTSVASIVI-MAVIIVFIVLAVVLISEGERKVPIQ 237
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y A +IP +N G+ P++ + +LA PS ++ G +
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMGGVMPIIFASAVLAIPSTVSLFFGGNGKSSI 292
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
T+VG VY I + +F F
Sbjct: 293 SHFFQG-TTVGF--GVYLLIQTILILVFAYF 320
>gi|291286331|ref|YP_003503147.1| preprotein translocase subunit SecY [Denitrovibrio acetiphilus DSM
12809]
gi|290883491|gb|ADD67191.1| preprotein translocase, SecY subunit [Denitrovibrio acetiphilus DSM
12809]
Length = 436
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 163/339 (48%), Gaps = 26/339 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+ E F E+RRR+ T + + RIG +P PG D + Q F S + LG
Sbjct: 1 MFKKVEEIFSIPELRRRILWTLFFLFVYRIGAHVPTPGIDGEALSQ---FFAQQSGNLLG 57
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F GA KL+ F LGI P I A+I+++++ VP L +L+K G +G +KI Y +
Sbjct: 58 FFDMFTGGALSKLTVFGLGIMPYISAAIILELMTVAVPHLAELKKRGQEGRDKITRYTRY 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISE 312
++ ++++ + +A + S V +VTA L G + + W+ + ISE
Sbjct: 118 GTVAISLVQGMGIAIGLEGMTSPGGSPVVMFPGTGFRIVTAITLTTGTVFLMWLGEKISE 177
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G S+II GI+ G+ + + L+ + V+ ++ +L + VT V +
Sbjct: 178 KGLGNGISVIIFAGIIAGFPSAVSRTLTLVQTGEVQLIT-IIAVLAIILAVTAAIVFMET 236
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + + + Y+P +NP+G+ P++ +LAFPS LAS
Sbjct: 237 SSRRLPIQYV--RKGGGGKGNVATS----YLPLKLNPAGVIPIIFAMSILAFPSTLASFS 290
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q + L+P + WVYY + F+ F F
Sbjct: 291 ENLLVQKISFFLSPSS------WVYYAVTLGFIIFFTYF 323
>gi|210623208|ref|ZP_03293647.1| hypothetical protein CLOHIR_01597 [Clostridium hiranonis DSM 13275]
gi|210153745|gb|EEA84751.1| hypothetical protein CLOHIR_01597 [Clostridium hiranonis DSM 13275]
Length = 422
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 35/356 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SV 198
+L+ +++ EIR++L T +++V+ RIG IP+PG D +I Q V G S+
Sbjct: 1 MLSQIKQAWKLKEIRKKLLYTLMMVVVFRIGTTIPVPGIDTSIIKQ----MVEGNNLLSL 56
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA + F LGI P I ASI++Q+L SL +L+K G +G +K+ Y
Sbjct: 57 YNMFTGGAFSNFTLFALGIGPYITASIIIQLLTVGFESLKELQKSGEEGKKKMDKYTRCT 116
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+L A ++A+ + + ++ S +V + LV +M + WI D I+E G G G
Sbjct: 117 ALALAFVQAIGITLGIVRSAL--KSDNVFFITTVIITLVSASMMVMWIGDRITEKGLGNG 174
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SS+II VGI++ + +Q+ + W +L L+ V + + + E RK+
Sbjct: 175 SSVIIFVGIISRIPIDGIAIANQIKSGATPIWAAIL-LVVVILLTILGVTFIQEATRKIP 233
Query: 379 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY G K+ +IP +N SG+ P++ + +LA P +A +G+
Sbjct: 234 VQYAKRVVGRKMYGGQ---------SSHIPMKVNQSGVMPIIFASSILAMPQTIAMFMGT 284
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
Q V++ L+ T G W+Y +I + F+ F YT TI+ V D
Sbjct: 285 DAQQFVQQWLSGATEQGF--WIYRSIEILLIIFFSYF------YT---TISFNVED 329
>gi|409991903|ref|ZP_11275127.1| preprotein translocase subunit SecY [Arthrospira platensis str.
Paraca]
gi|291567802|dbj|BAI90074.1| preprotein translocase SecY subunit [Arthrospira platensis NIES-39]
gi|409937233|gb|EKN78673.1| preprotein translocase subunit SecY [Arthrospira platensis str.
Paraca]
Length = 438
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 53/351 (15%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 193
A E+F + + +R R+ VT L+++ R+G F+P+PG DR+ Q+ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRQAFSQNIQNTPFIGFLDL 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
SG G F A L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIIMQLMTAALPTLEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++LG+AIL+++ +A + P++ + L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVMWVSELITE 181
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLG----LLGVFTIVT 364
G G G+SL+I + I+ +L Q LGS++ ++G LL +F +
Sbjct: 182 RGIGNGASLLIFINIVA--------VLPQSLGSTIELAQSGDSAIVGRVVILLLIFLAMI 233
Query: 365 MWAVVVTEGCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
+ V V EG R++ + + G KL RE S Y+P +N G+ P++ +
Sbjct: 234 VGIVFVQEGTRRIPIVSARRQVGRKL---YREKS------SYLPLRLNQGGVMPIIFASA 284
Query: 421 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L P+ ++ +P + L+P G PWVY Y + F+ F
Sbjct: 285 VLILPASISQFANNPILVQISTYLSPG---GPAPWVYIAFYLLMILFFSYF 332
>gi|283455386|ref|YP_003359950.1| secY protein translocase subunit secY [Bifidobacterium dentium Bd1]
gi|283102020|gb|ADB09126.1| secY Protein translocase subunit secY [Bifidobacterium dentium Bd1]
Length = 457
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 21/343 (6%)
Query: 141 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 200
S L ++F E+R ++ T +I+I R+G F+P PG D ++ Q S S +
Sbjct: 10 ESQLRTLIQAFKTKELRNKILFTLGIIIIYRVGSFVPTPGVDYTVVQQCVGKMSSTSENF 69
Query: 201 LG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+G GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y
Sbjct: 70 IGLVNLFSGGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYT 129
Query: 256 WWISLGFAILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
++++G A+L++ + A ++ S SV +++V ++ G + W+ +
Sbjct: 130 RYLTIGLAVLQSTTILVTARSGALFNYQCSQVVPDGSVWNLLVMVLIMTGGTGLIMWMAE 189
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G GQG S++I + I +G+ L+++ G+ W F ++GV ++ + V
Sbjct: 190 LITDKGLGQGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWGKFAT-VVGVLLVIMILVV 248
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V R++ +QY + S Y+P IN SG+ P + + +LA P+++
Sbjct: 249 YVELSQRRIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLI 303
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A S Q + +N + W Y +YA + F F
Sbjct: 304 AQFGNSD--QSWVKWINSNLANTTSVW-YIALYALMIVFFCFF 343
>gi|212716591|ref|ZP_03324719.1| hypothetical protein BIFCAT_01520 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|225351025|ref|ZP_03742048.1| hypothetical protein BIFPSEUDO_02607 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|212660295|gb|EEB20870.1| hypothetical protein BIFCAT_01520 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|225158481|gb|EEG71723.1| hypothetical protein BIFPSEUDO_02607 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 445
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 164/335 (48%), Gaps = 21/335 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++ E+R ++ T +I+I RIG FIP PG D +++ Q S S S + +G
Sbjct: 6 QALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYKVVQQCVGSMNSTSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + A ++ S SV +++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELITDKGLG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G+ W F ++GV ++ + + V R+
Sbjct: 186 QGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWAKFA-AVVGVLLVIMILVIYVELSQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGKSD 298
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 299 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFF 331
>gi|313140885|ref|ZP_07803078.1| preprotein translocase SecY subunit [Bifidobacterium bifidum NCIMB
41171]
gi|313133395|gb|EFR51012.1| preprotein translocase SecY subunit [Bifidobacterium bifidum NCIMB
41171]
Length = 444
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 170/338 (50%), Gaps = 27/338 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++F E+R ++ T +I+I RIG FIP PG + + + QD ++ +SGS + L
Sbjct: 6 QAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTV-QDCINTLSGSQENFIGLANLF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 124
Query: 263 AILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + + +++ +SV ++ V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELITDKGI 184
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GQG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R
Sbjct: 185 GQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGI-VTGVLVVILVFVDFVELSQR 243
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LG 433
++ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSG 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + L TSV W Y +YA + F F
Sbjct: 299 QSWVDWINKNLANTTSV----W-YIALYALMIVFFCFF 331
>gi|311064877|ref|YP_003971603.1| protein translocase subunit SecY [Bifidobacterium bifidum PRL2010]
gi|390937431|ref|YP_006394990.1| pre protein translocase subunit [Bifidobacterium bifidum BGN4]
gi|421733538|ref|ZP_16172642.1| preprotein translocase subunit SecY [Bifidobacterium bifidum LMG
13195]
gi|421735492|ref|ZP_16174416.1| preprotein translocase subunit SecY [Bifidobacterium bifidum IPLA
20015]
gi|310867197|gb|ADP36566.1| SecY Protein translocase subunit [Bifidobacterium bifidum PRL2010]
gi|389891044|gb|AFL05111.1| pre protein translocase subunit [Bifidobacterium bifidum BGN4]
gi|407078574|gb|EKE51376.1| preprotein translocase subunit SecY [Bifidobacterium bifidum LMG
13195]
gi|407297225|gb|EKF16683.1| preprotein translocase subunit SecY [Bifidobacterium bifidum IPLA
20015]
Length = 444
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 170/338 (50%), Gaps = 27/338 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++F E+R ++ T +I+I RIG FIP PG + + + QD ++ +SGS + L
Sbjct: 6 QAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTV-QDCINTLSGSQENFIGLVNLF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 124
Query: 263 AILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + + +++ +SV ++ V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELITDKGI 184
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GQG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R
Sbjct: 185 GQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGI-VTGVLVVILVFVDFVELSQR 243
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LG 433
++ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSG 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + L TSV W Y +YA + F F
Sbjct: 299 QSWVDWINKNLANTTSV----W-YIALYALMIVFFCFF 331
>gi|318042546|ref|ZP_07974502.1| preprotein translocase subunit SecY [Synechococcus sp. CB0101]
Length = 438
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 167/331 (50%), Gaps = 35/331 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS-----------FVSGSVDELGD 203
++R R+ +T L+++ R+G +IP+PG DR QD+++ F G + LG
Sbjct: 23 DLRNRVLITLGLLLLVRLGIYIPVPGIDRAAF-QDFIARGGQLIGFLDIFTGGGISTLGV 81
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGF 262
FG LGI P I ASI++Q+L +P L L+K EG G KI Y +++LG+
Sbjct: 82 FG---------LGILPFINASIILQLLTSALPQLEDLQKNEGEAGRRKIAQYTRYVALGW 132
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
IL++V+ A PY+ S V V+ TA LV G+M + WI + I+E G GQG+SL+
Sbjct: 133 GILQSVVFALILRPYATAGTSELV-FVLQTAVALVTGSMVVMWISEVITERGIGQGASLV 191
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 382
I + I+ L + ++ L+ VF I + V V EG R++
Sbjct: 192 IYLNIVATLPRALGSTIELAQSGDRSTVGGIVVLVAVFLITIVGIVCVEEGSRRI----- 246
Query: 383 GFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
+ SA R+ + ++ + Y+P +N G+ P++ + ++ P +A+I P+ ++
Sbjct: 247 --PIVSAKRQVGGATLSARQSYLPLKLNAGGVMPIIFASAVVFLPLTIANITKQPWLINI 304
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P + PW+Y ++ + F+ F
Sbjct: 305 AAALSPNSGT---PWLYALLFFGLIIGFSFF 332
>gi|417002454|ref|ZP_11941837.1| preprotein translocase, SecY subunit [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479122|gb|EGC82219.1| preprotein translocase, SecY subunit [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 424
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 156/300 (52%), Gaps = 23/300 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
++ AA+ + EIR+R + T +++V+ R+G IP+P D + + Y + VD L
Sbjct: 3 EIIKKAAK---EEEIRKRFYFTLLMLVVYRLGNNIPIPFIDTKALADAYQNIQGTLVDYL 59
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
G LS F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y +++
Sbjct: 60 NMLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELSREGEQGRKTIQKYTRYVT 119
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ AI +AV + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G+
Sbjct: 120 IALAIFQAVAITNGLYGAALSSATGFQKVVM--NIVLIGGTMFVTWMGETITEKGLGNGT 177
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVK 378
SLII +GI+ + T+ + L + ++ + V IV +AVV ++EG RKV
Sbjct: 178 SLIIFMGIIASFPRTIARWQQGLHYDTTSILSIIIMAIIVVLIV--FAVVEISEGERKVP 235
Query: 379 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY G K+ +IP +N G+ P++ + +LA PS ++ G
Sbjct: 236 IQYAKRVVGRKMYGGQ---------STHIPIKVNMGGVMPIIFASAVLAIPSTVSLFFGG 286
>gi|171741253|ref|ZP_02917060.1| hypothetical protein BIFDEN_00328 [Bifidobacterium dentium ATCC
27678]
gi|306823548|ref|ZP_07456923.1| preprotein translocase subunit SecY [Bifidobacterium dentium ATCC
27679]
gi|309802966|ref|ZP_07697067.1| preprotein translocase, SecY subunit [Bifidobacterium dentium
JCVIHMP022]
gi|171276867|gb|EDT44528.1| preprotein translocase, SecY subunit [Bifidobacterium dentium ATCC
27678]
gi|304553255|gb|EFM41167.1| preprotein translocase subunit SecY [Bifidobacterium dentium ATCC
27679]
gi|308220433|gb|EFO76744.1| preprotein translocase, SecY subunit [Bifidobacterium dentium
JCVIHMP022]
Length = 445
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 164/335 (48%), Gaps = 21/335 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ T +I+I R+G F+P PG D ++ Q S S + +G
Sbjct: 6 QAFKTKELRNKILFTLGIIIIYRVGSFVPTPGVDYTVVQQCVGKMSSTSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + A ++ S SV +++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLLVMVLIMTGGTGLIMWMAELITDKGLG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G+ W F ++GV ++ + V V R+
Sbjct: 186 QGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWGKFAT-VVGVLLVIMILVVYVELSQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY + S Y+P IN SG+ P + + +LA P+++A G+
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGNSD 298
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 299 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFF 331
>gi|376007809|ref|ZP_09784994.1| preprotein translocase membrane subunit [Arthrospira sp. PCC 8005]
gi|423062916|ref|ZP_17051706.1| preprotein translocase SecY subunit [Arthrospira platensis C1]
gi|375323785|emb|CCE20747.1| preprotein translocase membrane subunit [Arthrospira sp. PCC 8005]
gi|406715495|gb|EKD10649.1| preprotein translocase SecY subunit [Arthrospira platensis C1]
Length = 438
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 170/351 (48%), Gaps = 53/351 (15%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 193
A E+F + + +R R+ VT L+++ R+G F+P+PG DR+ Q+ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRQAFSQNIQNTPFIGFLDL 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
SG G F A L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIIMQLMTAALPTLEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++LG+AIL+++ +A + P++ + L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVMWVSELITE 181
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLG----LLGVFTIVT 364
G G G+SL+I + I+ +L Q LGS++ ++G LL +F +
Sbjct: 182 RGIGNGASLLIFINIVA--------VLPQSLGSTIELAQSGDSAIVGRVVILLLIFLAMI 233
Query: 365 MWAVVVTEGCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
+ V V EG R++ + + G KL RE S Y+P +N G+ P++ +
Sbjct: 234 VGIVFVQEGTRRIPIVSARRQVGRKL---YREKS------SYLPLRLNQGGVMPIIFASA 284
Query: 421 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L P+ ++ +P + L+P G PW+Y Y + F+ F
Sbjct: 285 VLILPASISQFANNPVLVQISTYLSPG---GPAPWLYIAFYLLMILFFSYF 332
>gi|194477040|ref|YP_002049219.1| preprotein translocase SecY [Paulinella chromatophora]
gi|171192047|gb|ACB43009.1| preprotein translocase SecY [Paulinella chromatophora]
Length = 438
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 18/324 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+R R+ T L++I R+G +IP+PG DR Q +L+ + L F G L
Sbjct: 22 KNLRDRVITTIGLLLIIRLGIYIPVPGIDRVAF-QAFLNQGGQLIGFLDIFTGGGLSTLG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q+L ++P L L+K EG G K+ +++ G+ +L++ +
Sbjct: 81 IFALGILPFINASIIIQLLTTVLPQLDDLQKNEGEAGRRKVSQITRYLAFGWGLLQSTVF 140
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A PY++ S + V+ TA LV G++ + WI + I++ G GQG+SL+I + I+
Sbjct: 141 AFILRPYAMSGLSQPI-FVIQTALALVTGSIVVMWISEVITDRGIGQGASLVIFLNIVAT 199
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
L L + ++ L VF I + + V EG R++ + SA
Sbjct: 200 LPRALGSTLELVQTGDRHTLAGIIVLALVFLITILGIIFVQEGSRRI-------PIISAK 252
Query: 391 RE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
R+ + +T + Y+P +N G+ P++ + L+ P +A+I +P+ V LNP
Sbjct: 253 RQIEKTNLLTSRQSYLPLKLNAGGVMPIIFASALVFLPLTIANITKAPWLIIVASYLNPN 312
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
++ PW+Y ++ + F+ F
Sbjct: 313 SNT---PWLYALLFFSLILGFSFF 333
>gi|310288004|ref|YP_003939263.1| protein translocase subunit secY [Bifidobacterium bifidum S17]
gi|309251941|gb|ADO53689.1| Protein translocase subunit secY [Bifidobacterium bifidum S17]
Length = 444
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 170/338 (50%), Gaps = 27/338 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++F E+R ++ T +I+I RIG FIP PG + + + QD ++ +SGS + L
Sbjct: 6 QAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTV-QDCINTLSGSQENFIGLVNLF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 124
Query: 263 AILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + + +++ +SV ++ V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELITDKGI 184
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GQG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R
Sbjct: 185 GQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGI-VTGVLVVILVFVDFVELSQR 243
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LG 433
++ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSG 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + L TSV W Y +YA + F F
Sbjct: 299 QSWVVWINKNLANTTSV----W-YIALYALMIVFFCFF 331
>gi|209527123|ref|ZP_03275637.1| preprotein translocase, SecY subunit [Arthrospira maxima CS-328]
gi|209492463|gb|EDZ92804.1| preprotein translocase, SecY subunit [Arthrospira maxima CS-328]
Length = 438
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 170/351 (48%), Gaps = 53/351 (15%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 193
A E+F + + +R R+ VT L+++ R+G F+P+PG DR+ ++ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRQAFSENIQNTPFIGFLDL 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
SG G F A L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIIMQLMTAALPTLEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++LG+AIL+++ +A + P++ + L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVMWVSELITE 181
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLG----LLGVFTIVT 364
G G G+SL+I + I+ +L Q LGS++ ++G LL +F +
Sbjct: 182 RGIGNGASLLIFINIVA--------VLPQSLGSTIELAQSGDSAIVGRVVILLLIFLAMI 233
Query: 365 MWAVVVTEGCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
+ V V EG R++ + + G KL RE S Y+P +N G+ P++ +
Sbjct: 234 VGIVFVQEGTRRIPIVSARRQVGRKL---YREKS------SYLPLRLNQGGVMPIIFASA 284
Query: 421 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L P+ ++ +P + L+P G PW+Y Y + F+ F
Sbjct: 285 VLILPASISQFANNPVLVQISTYLSPG---GPAPWLYIAFYLLMILFFSYF 332
>gi|270284454|ref|ZP_05966143.2| preprotein translocase, SecY subunit [Bifidobacterium gallicum DSM
20093]
gi|270276914|gb|EFA22768.1| preprotein translocase, SecY subunit [Bifidobacterium gallicum DSM
20093]
Length = 461
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 168/335 (50%), Gaps = 21/335 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP PG D +++ + + + + +G
Sbjct: 19 QAFRTKELRNKILFVLGIIIIYRIGSFIPTPGVDEKVVHDCVANTTNNAENFIGLVNLFS 78
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 79 GGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 138
Query: 264 ILEA--VIVACYSLPYSIYAASH-----SVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ +IV S Y S SV +++V ++ G + W+ + I++ G G
Sbjct: 139 VLQSTTIIVTARSGALFNYQCSQVIPDGSVWNLIVMILIMTGGTGLIMWMAELITDKGIG 198
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G++ W+ F + + GV ++ ++ V V R+
Sbjct: 199 QGMSILIFLSICSGFLPQLWQIGWGTNGTNGDWFKFGV-VTGVLLVIMIFVVYVELSQRR 257
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY + S Y+P +N SG+ P + + +LA P+++A G+
Sbjct: 258 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLIAQ-FGNAE 311
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 312 QSWVKWI-NSNLANTTSVW-YIVLYALMIVFFCFF 344
>gi|15605676|ref|NP_213051.1| preprotein translocase subunit SecY [Aquifex aeolicus VF5]
gi|6226133|sp|O66491.1|SECY_AQUAE RecName: Full=Protein translocase subunit SecY
gi|215794644|pdb|3DL8|G Chain G, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|215794645|pdb|3DL8|H Chain H, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|2982812|gb|AAC06435.1| preprotein translocase SecY [Aquifex aeolicus VF5]
Length = 429
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 168/331 (50%), Gaps = 30/331 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 210
E+R++ T ++ VI R+G IP+PG + + +D+L GSV L D G L +L
Sbjct: 12 KELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNLGRL 70
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 269
+ F LG+ P I ASI+MQ+L +PSL +L KE D G KI Y +++L A ++++
Sbjct: 71 TVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLG 130
Query: 270 VACYSL----PYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+A + P I + + +++T LV G M + WI D I+E G G G+SLII
Sbjct: 131 IAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIF 190
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
GI+ + + + ++ + P L L+ I + +V V E R++ +QY G
Sbjct: 191 AGIVANFPNAVIQFYEKVKTGDI--GPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPG 248
Query: 384 FKLAS---AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
++ A R+ Y+P INP+G+ P++ LL PS L + + +PF + +
Sbjct: 249 RQVGRQLYAGRKT--------YLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVI 300
Query: 441 KEILNPETSVGA--RPWVYYTIYAFFVFLFN 469
++ P GA ++Y T FF + +
Sbjct: 301 ADMFQP----GAIFYNFLYVTFIVFFTYFYT 327
>gi|300867116|ref|ZP_07111782.1| preprotein translocase subunit SecY [Oscillatoria sp. PCC 6506]
gi|300334871|emb|CBN56948.1| preprotein translocase subunit SecY [Oscillatoria sp. PCC 6506]
Length = 435
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 34/339 (10%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
A E+F + + +R R+ VT L+++ R+G +P+PG DR Q+ + +L
Sbjct: 11 AQETFLQMAQAAGLRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVQNSPLIGFLDLF 70
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLG 261
G L F LGI P I ASI++Q+L +PSL +L+K EG G KI +++LG
Sbjct: 71 SGGGLSALGIFALGILPYINASIIIQLLTAALPSLEELQKNEGEAGRRKISQITRYVALG 130
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+A+L++V +A + P++ A + TA L G+M + W+ + ++E G G G+SL
Sbjct: 131 WAVLQSVGIAIWVSPFAQEPAPLFIAQ---TALALTAGSMFVMWVSELVTERGIGNGASL 187
Query: 322 IICVGILTGYTETLYKML-------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
+I + I+ +L + + SQ++G + LL VF ++ + V V EG
Sbjct: 188 LIFINIVAVLPRSLGQTVELAQSGNSQIVGQVIV-------LLLVFLVMIVGIVFVQEGT 240
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ E Y+P +N G+ P++ + +L P+ L
Sbjct: 241 RRI-------PIISARRQVGRKVYREKSSYLPLRLNQGGVMPIIFASAVLILPASLGQFT 293
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P V LNP G+ PW+Y +Y + F+ F
Sbjct: 294 NNPILVQVANALNPN---GSMPWLYALVYLVLILFFSYF 329
>gi|148238752|ref|YP_001224139.1| preprotein translocase subunit SecY [Synechococcus sp. WH 7803]
gi|147847291|emb|CAK22842.1| Preprotein translocase SecY subunit [Synechococcus sp. WH 7803]
Length = 439
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 50/339 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----------FVSGSVDELGDF 204
E+R R+ T L+++ R+G +IP+PG DR Q F G + LG
Sbjct: 23 ELRNRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLG-- 80
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------IFALGILPFINASIILQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++VI A PY++ S +V + TA LV G+M + WI + I+E G GQG+SL+I
Sbjct: 134 LIQSVIFAVILRPYALEGLSDAV-FITQTALALVTGSMIVMWISEVITERGIGQGASLVI 192
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPF--------MLGLLGVFTIVTMWAVVVTEGCR 375
+ I+ L Q LGS++ ++ L+ VF + + + V EG R
Sbjct: 193 FLNIVA--------TLPQALGSTIEKAQTGDRNDVFGIIVLVLVFLVTIVGIIFVQEGAR 244
Query: 376 KVKLQYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
+ + SA R+ + + + Y+P +N G+ P++ + L+ P +A+
Sbjct: 245 R-------LPIVSAKRQVGGSALLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFS 297
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P LNP S PW Y ++ + F+ F
Sbjct: 298 QNPLLITAASALNPSAS---NPWPYALLFFSLILGFSYF 333
>gi|411119499|ref|ZP_11391879.1| protein translocase subunit secY/sec61 alpha [Oscillatoriales
cyanobacterium JSC-12]
gi|410711362|gb|EKQ68869.1| protein translocase subunit secY/sec61 alpha [Oscillatoriales
cyanobacterium JSC-12]
Length = 465
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 48/362 (13%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+A E+F + + +R R+ +T ++++ R+G F+P+P DR+ Q + S ++
Sbjct: 10 SAQETFAQMAQAAGLRGRVLLTVGMLILVRLGIFLPIPDIDRQAFAQSVQNNPVISFLDI 69
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +++L
Sbjct: 70 FAGGGLSALGIFALGILPYINASIILQLLTAALPSLENLQKNEGEAGRRKISQITRYVAL 129
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMV----------------------------- 291
G+A++++V +A + + AA + V+V
Sbjct: 130 GWAVVQSVGLAWWVVNSG--AAQIDGQQVLVQRAANGSFSFVTENGASIGFGSLVPFIAS 187
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 351
TA L G+M + WI + ++E G G G+SL+I V I++G +L + L
Sbjct: 188 TALALTAGSMLVMWIGELVTERGIGNGASLLIVVSIVSGLPRSLGQTLELAQTGDRSLVG 247
Query: 352 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE--PYIPFNINP 409
++ LL VF ++ + V V EG R++ + SA R+ T +E Y+P +N
Sbjct: 248 GIIILLLVFLVMIVGIVFVQEGTRRI-------PIISARRQVGRKTYLERSSYLPLRLNQ 300
Query: 410 SGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN 469
SG+ P++ + +L P +A +P V L+P G PW+Y T Y + F+
Sbjct: 301 SGVMPIIFASAVLFLPVYIAEFTKNPLLSQVASYLSPS---GPTPWLYITFYLLLILFFS 357
Query: 470 IF 471
F
Sbjct: 358 YF 359
>gi|256544526|ref|ZP_05471899.1| preprotein translocase, SecY subunit [Anaerococcus vaginalis ATCC
51170]
gi|256399851|gb|EEU13455.1| preprotein translocase, SecY subunit [Anaerococcus vaginalis ATCC
51170]
Length = 423
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 156/294 (53%), Gaps = 10/294 (3%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ ++ + EIR++ + T V+++I R+G IP+P D + + Y VD L
Sbjct: 1 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G LS F LG+ P I ASI+MQ+L ++P L +L KEG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTKEGEAGRKTIQKYTRYMTI 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
AI +A+ + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G S
Sbjct: 121 FLAIFQAIAITNGLYGAALSSATPFQKIVM--NVVLIGGTMLVTWMGETITEKGIGNGVS 178
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
+II +GI+ +TL + L +++ W ++ L V + ++ V +TEG RK+ +Q
Sbjct: 179 IIIFMGIIANVPKTLKTWKTGLHYNTITWISILIMAL-VVIFIVVFTVKITEGERKIPVQ 237
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
Y A +IP +N SG+ P++ + +LA PS ++ +G+
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTISLFMGN 286
>gi|88807903|ref|ZP_01123414.1| preprotein translocase SecY [Synechococcus sp. WH 7805]
gi|88787942|gb|EAR19098.1| preprotein translocase SecY [Synechococcus sp. WH 7805]
Length = 439
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 50/339 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----------FVSGSVDELGDF 204
E+R R+ T L+++ R+G +IP+PG DR Q F G + LG
Sbjct: 23 ELRNRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLG-- 80
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------IFALGILPFINASIILQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++VI A PY++ S V + TA LV G+M + WI + I+E G GQG+SL+I
Sbjct: 134 LIQSVIFAVILRPYALEGLSDGV-FITQTALALVTGSMIVMWISEVITERGIGQGASLVI 192
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPF--------MLGLLGVFTIVTMWAVVVTEGCR 375
+ I+ L Q LGS++ ++ L+ VF + + + V EG R
Sbjct: 193 FLNIVA--------TLPQALGSTIEKAQTGDRSDVFGIIVLVLVFLVTIVGIIFVQEGAR 244
Query: 376 KVKLQYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
+ + SA R+ + + + Y+P +N G+ P++ + L+ P +A+
Sbjct: 245 R-------LPIVSAKRQVGGSALLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFS 297
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P LNP S PW Y ++ + F+ F
Sbjct: 298 QNPLLITAASALNPSAS---NPWPYALLFFSLILGFSYF 333
>gi|225376428|ref|ZP_03753649.1| hypothetical protein ROSEINA2194_02070 [Roseburia inulinivorans DSM
16841]
gi|225211804|gb|EEG94158.1| hypothetical protein ROSEINA2194_02070 [Roseburia inulinivorans DSM
16841]
Length = 443
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 19/303 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F +IR+R+ T +++V+ RIG +P+PG D + F S + D +G
Sbjct: 1 MLETLRNAFKIKDIRKRIIFTFLMLVVIRIGSQLPIPGVDSEVFAN---WFASQTADGMG 57
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F G+ L LS F L I+P I +SI+MQ+L +P L +++++G DG +KI +
Sbjct: 58 FFDAVTGGSFLNLSIFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEDGRKKIAEITRY 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHS----VKHVMVTAFLLVCGAMTMSWICDTISES 313
+++ A++EA+ +A S S V ++++ F L G+ + WI + I+E
Sbjct: 118 LTVALALIEAIAMAIGFSRGGYLEQSDSTAVYVMNIIMVIFTLTAGSAVLMWIGERITEK 177
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM--WAVVVT 371
G G G S+++ + I++ + + Q + + ++ + IV M + V++
Sbjct: 178 GVGNGISIVLTINIISRMPNDIGTLYQQFISGKTVPKGILAAVIILAIIVAMVVFVVLLQ 237
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+G RK+ +QY + + + +IP +N SG+ PV+ LL P I+AS+
Sbjct: 238 DGVRKIPVQY-----SKKIQGRKQVGGQSTHIPLKVNTSGVIPVIFAQSLLQTPVIIASL 292
Query: 432 LGS 434
LG
Sbjct: 293 LGK 295
>gi|325848885|ref|ZP_08170395.1| preprotein translocase, SecY subunit [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480529|gb|EGC83591.1| preprotein translocase, SecY subunit [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 423
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 154/293 (52%), Gaps = 10/293 (3%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ ++ + EIR++ + T V+++I R+G IP+P D + + Y VD L
Sbjct: 1 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G LS F LG+ P I ASI+MQ+L ++P L +L KEG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTKEGEAGRKTIQKYTRYMTI 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
AI +A +A + Y +S + +V +L+ G M ++W+ +TI+E G G G S
Sbjct: 121 FLAIFQA--IAITNGLYGAALSSATPFQKLVMNVVLIGGTMLVTWMGETITEKGIGNGVS 178
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
+II +GI+ +TL + L +++ W ++ + V + ++ V +TEG RK+ +Q
Sbjct: 179 IIIFMGIIANVPKTLKTWKTGLHYNTISWLSILV-MAIVVIFIVVFTVRITEGERKIPVQ 237
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
Y A +IP +N SG+ P++ + +LA PS ++ +G
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTISLFMG 285
>gi|260655363|ref|ZP_05860851.1| preprotein translocase, SecY subunit [Jonquetella anthropi E3_33
E1]
gi|424845175|ref|ZP_18269786.1| preprotein translocase, SecY subunit [Jonquetella anthropi DSM
22815]
gi|260629811|gb|EEX48005.1| preprotein translocase, SecY subunit [Jonquetella anthropi E3_33
E1]
gi|363986613|gb|EHM13443.1| preprotein translocase, SecY subunit [Jonquetella anthropi DSM
22815]
Length = 432
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 17/330 (5%)
Query: 144 LNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDEL 201
+ N+ FK E++RR+ T +++++ RIG IP PG D + + + V G +D
Sbjct: 1 MANSFRDVFKLPELKRRIIFTLMMLLVFRIGAHIPTPGIDTAAMSHAFAGNGVLGFLDMF 60
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA + S F LG++P I ASI+MQ+ C I P+L +++KEG G +K+ Y W ++
Sbjct: 61 AG-GALRRFSVFSLGVAPYINASIVMQLACVIFPTLERMQKEGPQGQKKLTQYTRWGAIL 119
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
F +A+ + + +++ V + +V G++ + W+ + IS+ G G G S+
Sbjct: 120 FGFAQAIGLVFWLRRLGVFSGGSMDFFVAICT--VVAGSIAVMWLGEEISDHGIGNGISV 177
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
II GI+ + E + + L V ML L + V AV++ EG R++ +QY
Sbjct: 178 IIYAGIVARFPEGVIRTFGLLRDGQVGLIT-MLVALAIMVGVLAGAVLLQEGQRRLPVQY 236
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
A + +IP IN G+ P++ + LL FP + S
Sbjct: 237 -----AKRVVGNRVYGGQSTFIPLRINQGGVMPIIFASSLLIFPYTILKFFDSQSVNRAA 291
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
E L P + W+Y +Y + F F
Sbjct: 292 EALAPGS------WLYSVLYVILIVFFTYF 315
>gi|428217357|ref|YP_007101822.1| protein translocase subunit SecY [Pseudanabaena sp. PCC 7367]
gi|427989139|gb|AFY69394.1| protein translocase subunit secY/sec61 alpha [Pseudanabaena sp. PCC
7367]
Length = 435
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 170/337 (50%), Gaps = 28/337 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+A E+F + + +R RL VT ++V+ R+G +IPLPG DR ++ + L+ S ++ L
Sbjct: 10 SAQETFMQMAQAAGLRSRLLVTIGMLVLIRLGMYIPLPGIDRSVL--ETLARSSNTLGFL 67
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 258
F G L F LGI P I ASI+MQ+L +PSL L+K EG G KI Y ++
Sbjct: 68 NTFAGGGFTLLGVFALGILPFINASIIMQILAAALPSLENLQKNEGEAGRRKISQYTRYV 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAAS---HSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
+L FA+L+ + ++ + + +I A + + + TA LV G+M + W + I+E G
Sbjct: 128 ALFFAVLQGIGISLFLI--NINATTIPDPGFQFIFETAIALVAGSMFVMWAGELITERGV 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ +L +S L +L LL +F + + V V EG R
Sbjct: 186 GNGASLLIFINIVAVLPSSLGDTIS-LTQQDSAMLGGVLLLLVIFLAMIVGIVFVQEGER 244
Query: 376 KVKLQYYGFKLASAA-REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
++++ Y ++ RE S Y+P +N G+ P++ + + P+IL+ + S
Sbjct: 245 RIQIIYARRQVGRKMYREQS------SYLPLKLNQGGVMPIIFASSVFFLPAILSDVFSS 298
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q V L P + W Y Y + F+ F
Sbjct: 299 VAMQRVSSFLTPGS------WGYVVTYLVLILAFSYF 329
>gi|338734005|ref|YP_004672478.1| preprotein translocase subunit secY [Simkania negevensis Z]
gi|336483388|emb|CCB89987.1| preprotein translocase subunit secY [Simkania negevensis Z]
Length = 457
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 170/344 (49%), Gaps = 41/344 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF---GAELK 209
E+++++ T ++++ RIG +IP+PG + + Q + G + +L D GA K
Sbjct: 13 ELKQKIVFTLAMLLVCRIGAYIPVPGINGDEVVQIFRQMTGGGQNLLQLVDVFSGGAFAK 72
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLV-QLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
++ LG+ P I ASI+MQVL +VPS+ ++R+ G G K+ I ++ A+ ++
Sbjct: 73 MTIIALGVMPYISASIIMQVLVAVVPSMQREIRENGEAGKRKMGKMIRIATVFLALFQSA 132
Query: 269 IVACYSLPYSIYAASHSVKHV-------------MVTAFLLVCGAMTMSWICDTISESGF 315
++A Y+L ++ V + +V F + G + + W+ + I+E G
Sbjct: 133 LLAKYALSLNVAHPGVIVDQLINVQIGGFPWLFYLVIMFAMSAGTLFLMWVGEQITERGI 192
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVT 371
G G SLII +GIL TL ++SQL S + ++ L VF ++ + ++V
Sbjct: 193 GNGISLIITIGILASLPMTLGSIVSQLNLDSQEPGQLTFSSIVILSIVFVLIIIGTILVI 252
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+G RK+ LQY AR E + +IP +N +G+ PV+ + LL FP+ +
Sbjct: 253 QGTRKIPLQY--------ARRVVGRHETQGGSSHIPLKVNYAGVIPVIFASSLLMFPATI 304
Query: 429 ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A +G W +V L+P + WVY T++ + F F
Sbjct: 305 AQFIGRGNWLSNVVMWLSPGS------WVYTTLFVLLIMFFTYF 342
>gi|319789258|ref|YP_004150891.1| preprotein translocase, SecY subunit [Thermovibrio ammonificans
HB-1]
gi|317113760|gb|ADU96250.1| preprotein translocase, SecY subunit [Thermovibrio ammonificans
HB-1]
Length = 444
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 157/326 (48%), Gaps = 22/326 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+RRR T L+ + R+G IP+PG + + D+ G+V + D GA KL+
Sbjct: 15 ELRRRFLFTLALLAVFRLGAHIPVPGINVEAL-VDFFQRAQGTVFGMMDIFSGGALRKLT 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 270
F LG+ P I +SI+MQ+L +PS+ +L KE G G KI Y + ++ A ++A+ +
Sbjct: 74 IFALGVMPYISSSIIMQLLTVAIPSIEKLAKEEGEYGRRKINQYTRYGAVLLAFIQALGI 133
Query: 271 A----CYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
A + P + + + VT L G+ + W+ + I+E G G G SL+I
Sbjct: 134 AIGLESMTSPTGVPIVPNPGFTFLFVTVTTLTAGSTFLMWLGEKITEKGIGNGMSLLIFA 193
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GI+ + ++L+ + + + +L ++ + ++ V + E R+V LQY
Sbjct: 194 GIVASIPSAVIRVLTMVKSGDMSLFK-LLTVVAIIVLMIAAIVYIQEAERRVPLQY---- 248
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A + Y+P +NP+G+ P++ +L FP+ + + +P Q + E L
Sbjct: 249 -ARRTVGRQAVGRYTSYLPIKLNPAGVIPIIFAASILMFPATVVRFIHNPIAQSIYEALQ 307
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIF 471
P T+ +Y +Y +F F F
Sbjct: 308 PGTT------LYLVVYGALIFFFTYF 327
>gi|11465439|ref|NP_045170.1| preprotein translocase subunit SecY [Cyanidium caldarium]
gi|14195685|sp|P46249.2|SECY_CYACA RecName: Full=Protein translocase subunit SecY
gi|6466342|gb|AAF12924.1|AF022186_46 unknown [Cyanidium caldarium]
Length = 410
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 145/273 (53%), Gaps = 16/273 (5%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 212
++ +R RLF T I + R+G F+P+PG D++L DY + ++ + D KLS
Sbjct: 4 ENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSV 63
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLR-KEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I A+I +Q+L P+L +L+ +EG G +K+ ++S FA +E++ +
Sbjct: 64 FALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIV 123
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L YA ++ ++ T +L+ GAM + W+ D IS G G G+S+II V I + +
Sbjct: 124 ---LRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF 180
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ L L+QL S+++ F L VF+I + V V E RKV + +++
Sbjct: 181 AKFL---LNQLFVHSIKFLDFASYFALIVFSIACI--VFVQEAIRKVPI------ISAKQ 229
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 423
+ + + ++P IN G+ P++ + LLA
Sbjct: 230 LDSTSFYSNDYFLPLRINQGGVMPIILASSLLA 262
>gi|159904201|ref|YP_001551545.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9211]
gi|159889377|gb|ABX09591.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 439
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 158/329 (48%), Gaps = 24/329 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGA 206
E+R R+ +T ++++ R+G +IP+PG DR + + F+ +G G
Sbjct: 20 LNKELRGRVLITLGMLLLVRLGIYIPVPGIDR----EAFKEFIQQGGQLIGFLDIFTGGG 75
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAIL 265
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++
Sbjct: 76 ISTLGIFALGILPFINASIIIQLLTAALPQLEDLQKNEGEAGRRKIAQITRYLALGWGLM 135
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
++++ A YSI + S V V TA LV G+M + W+ + I+E G GQG+SL+I +
Sbjct: 136 QSLVFALILRQYSIESLSE-VSFVFQTAIALVTGSMIVMWLSEIITERGIGQGASLVIFL 194
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
I+ + L + + ++ LL VF I + + V EG R+
Sbjct: 195 NIVATLPKALSSTIEKAQTGDRNDVVGIIVLLVVFLITIVGIIFVQEGARR-------LP 247
Query: 386 LASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A+ +PF
Sbjct: 248 IVSAKRQIGGTALLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPFLIRAAG 307
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP S PW Y + + F F
Sbjct: 308 ALNPSAS---NPWPYALTFFALILGFAYF 333
>gi|294055201|ref|YP_003548859.1| preprotein translocase subunit SecY [Coraliomargarita akajimensis
DSM 45221]
gi|293614534|gb|ADE54689.1| preprotein translocase, SecY subunit [Coraliomargarita akajimensis
DSM 45221]
Length = 502
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 31/341 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 209
E+R+R+F T L+ I+R+G IPLPGFD I + +G F GA L
Sbjct: 13 ELRQRIFFTLALLFIARVGANIPLPGFDPGPIKDFFREQADAGGGLVGMFNMFTGGALLN 72
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 267
+ F LGI P I ASI+MQ++ + P++ +L++EG G +KI Y +++L +++
Sbjct: 73 GALFALGIMPHISASIIMQLMGAVFPAIARLQQEGDVGRQKINQYTRYLTLIICVVQGLL 132
Query: 268 VIVACYSLPYSIYAA------------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++VA S P SI + ++ + ++ L G M M W+ + I+ G
Sbjct: 133 LLVALSSNPASIVGSGFNPAEYGNVVIANKFQFLVTGTIFLTAGTMIMVWLGEQITARGI 192
Query: 316 GQGSSLIICVGILTGY---TETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVV 370
G G SL+I V I++G + Y+M +GS G +L + VT V +
Sbjct: 193 GNGISLLITVSIISGLPGAVASAYQMFVAPVGSDTPQLGVPQGVLMLALLFAVTAGLVAI 252
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
T+G RK+ +QY A ++P +N +G+ PV+ + +L FP+ +
Sbjct: 253 TQGQRKIPVQY-----AKRVVGRKVYGGQSSFLPLKVNYAGVMPVIFGSAILMFPTQILY 307
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LG ++ + S+ YY ++ +F+F+ F
Sbjct: 308 TLGKA--TNMNFLNEFADSLQRGEAAYYILFGLLIFVFSYF 346
>gi|392389852|ref|YP_006426455.1| protein translocase subunit secY/sec61 alpha [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520930|gb|AFL96661.1| protein translocase subunit secY/sec61 alpha [Ornithobacterium
rhinotracheale DSM 15997]
Length = 455
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 175/362 (48%), Gaps = 50/362 (13%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------G 205
E+R +L +T L+++ R G +IPLPG D I D L+ G+ +E G G
Sbjct: 15 EELRNKLIITLSLLLVYRFGSYIPLPGIDLSNINTDVLN-ARGADNENGLLSLLNAFTGG 73
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S LG+ P I ASI++Q++ VP L +L+KEG G +KI W+++ ++
Sbjct: 74 GFSRASILALGVMPYISASIVVQLMGMAVPYLQKLQKEGESGRKKITQITRWLTIAICLV 133
Query: 266 EA----VIVACYSLPYSIYAASHSVKHVMVTAF--------LLVCGAMTMSWICDTISES 313
+A V + LPY A + + V T+F +L+ G + + W+ + I++
Sbjct: 134 QAPAYLTSVTNFFLPYGDPAIAPAYV-VSPTSFWFWLPSIVILITGTIFIMWLGEKITDK 192
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SLII VGI+ + LSQ G FML + F VTM+ V++ +G
Sbjct: 193 GIGNGISLIIMVGIMANLPSAFFAELSQQSGI------FMLFTILGFLAVTMYCVLLVKG 246
Query: 374 CRKVKLQYYGFKLASAAREDSPIT---EVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R+V +QY G A R + T V YIP +N +G+ P++ ++ P +LA
Sbjct: 247 VRQVPVQYVG--RAQGGRSNYMKTFTNTVRQYIPLKVNAAGVMPIIFAQAIMFLPGLLAR 304
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN-IFDIVSILYTLLFT-ITLGV 488
+ KE G P + ++ F F + +F I+ +L+T +T +T+ V
Sbjct: 305 AV-------YKE--------GNMPSFFQSMSDPFSFWYCVVFGILIVLFTFFYTAVTIPV 349
Query: 489 ND 490
N
Sbjct: 350 NQ 351
>gi|310821014|ref|YP_003953372.1| preprotein translocase subunitSecY [Stigmatella aurantiaca DW4/3-1]
gi|309394086|gb|ADO71545.1| Preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 448
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 161/353 (45%), Gaps = 49/353 (13%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 201
LN A F +E+R RL T VL+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLVLLAVYRIGIFINTPGVDRAAMNAFMDAQKQSGGLVSLF 62
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + S
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGASGRQKINQYTRYGS 122
Query: 260 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
+ ++++ + ++ + SL S I S +T L G + W+ +
Sbjct: 123 IVLSVVQGIGISRWLASLGRSDAGQSGFNQIVVPDDSAWFTFMTVISLTAGTAFIMWLGE 182
Query: 309 TISESGFGQGSSLIICVGILTGY---TETLYKMLSQ-------LLGSSVRWWPFMLGLLG 358
I+E G G G SLII GI+ G +TL M +Q L+G +V FML ++
Sbjct: 183 RITERGIGNGISLIIFAGIVAGLLPNGKTLLDMTAQGAIEAAALVGLAV----FMLFIIA 238
Query: 359 VFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTT 418
V V V G R++ +QY A Y P +N SG+ P +
Sbjct: 239 V-------VVYVERGMRRIPVQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFA 286
Query: 419 TYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LL+FP+ L + PF Q ++ L PW+Y ++ V F F
Sbjct: 287 GALLSFPATLGTWF--PFLQTFRQGLE------GNPWLYNGLFVLLVIFFAYF 331
>gi|227485505|ref|ZP_03915821.1| possible preprotein translocase subunit SecY [Anaerococcus
lactolyticus ATCC 51172]
gi|227236504|gb|EEI86519.1| possible preprotein translocase subunit SecY [Anaerococcus
lactolyticus ATCC 51172]
Length = 424
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 171/333 (51%), Gaps = 20/333 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
++ AA+ + EIR++ + T +++VI R+G IP+P D + + Y + VD L
Sbjct: 4 IIKRAAK---EEEIRKKFYFTLMMLVIYRLGNNIPIPFIDTKALANAYSNIEGTLVDYLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G LS F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTREGEQGRKTIQKYTRYVTI 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
AI +A+ + ++ +A+ K VM +L+ G M ++W+ +T++E G G G+S
Sbjct: 121 ALAIFQAIAITNGLYGAALSSATGFQKIVM--NVVLIGGTMFVTWMGETMTEKGLGNGTS 178
Query: 321 LIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
L+I +GI+ + T+ + L +SV M+ +L VF ++ + V+++EG R++
Sbjct: 179 LLIFMGIIASFPRTISRWKEGLHYNTTSVLAIAIMV-ILIVFIVIAV--VLISEGERRIP 235
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY A +IP +N + P++ + +LA PS ++ G
Sbjct: 236 IQY-----AKRVVGRKMYGGQSTHIPVKVNMGNVMPIIFASAVLAIPSTVSLFFGGGGQS 290
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ N +T+ G VY TI + + +F F
Sbjct: 291 GLTAFFN-KTAFGFA--VYLTIQSALILIFAYF 320
>gi|33241143|ref|NP_876085.1| preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238673|gb|AAQ00738.1| Preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 439
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 157/329 (47%), Gaps = 24/329 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGA 206
E+R R+ +T +++ R+G +IP+PG DR + + F+ +G G
Sbjct: 20 LNKELRGRVLITLGMLLFVRLGIYIPVPGIDR----EAFKEFIQQGGQLIGFLDIFTGGG 75
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAIL 265
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++
Sbjct: 76 ISTLGIFALGILPFINASIIIQLLTAALPQLEDLQKNEGEAGRRKISQITRYVALGWGLM 135
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
++++ A Y+I + S + V TA LV G+M + W+ + I+E G GQG+SL+I +
Sbjct: 136 QSLVFALILRQYAIESLSET-AFVFQTAIALVTGSMIVMWLSEIITEKGIGQGASLVIFL 194
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
I+ + L + + ++ LL VF I + + V EG R+
Sbjct: 195 NIVATLPKALSSTIEKAQTGDRNDVFGIIVLLIVFLITIVGIIFVQEGARR-------LP 247
Query: 386 LASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A+ +P
Sbjct: 248 IVSAKRQIGGTALLPTRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIQAAS 307
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP + A PW Y + + F F
Sbjct: 308 ALNPSS---ANPWPYAITFFALILGFAYF 333
>gi|296126885|ref|YP_003634137.1| preprotein translocase subunit SecY [Brachyspira murdochii DSM
12563]
gi|296018701|gb|ADG71938.1| preprotein translocase, SecY subunit [Brachyspira murdochii DSM
12563]
Length = 446
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 167/342 (48%), Gaps = 34/342 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----- 197
+L + A F E+R R+ T + I++ RIG IP PG D P L F+S S
Sbjct: 1 MLKSLANIFKVQELRSRILFTIIAILVYRIGSHIPTPGID----PAALLGFLSSSQGGAG 56
Query: 198 ---VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
+ +L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y
Sbjct: 57 LLTIMDLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQY 116
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
+ +++L I+++ +A + + A + + +++ G M + W+ D I+
Sbjct: 117 VRYLTLVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQIT 176
Query: 312 ESGFGQGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
E G G G S+II GI+ G + + K S+ L S V + L + + ++
Sbjct: 177 ERGLGNGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFC 230
Query: 368 VVVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
VV E G R++ +QY A +IPF INPSG+ P++ + L+A P+
Sbjct: 231 VVYEESGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPA 285
Query: 427 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+AS+ W+ + +L S G+ W Y +Y V +F
Sbjct: 286 QIASLTRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMF 324
>gi|336315940|ref|ZP_08570845.1| preprotein translocase, SecY subunit [Rheinheimera sp. A13L]
gi|335879786|gb|EGM77680.1| preprotein translocase, SecY subunit [Rheinheimera sp. A13L]
Length = 442
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 162/330 (49%), Gaps = 27/330 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ + GA +
Sbjct: 16 SELKTRLLFVLLAIIVFRLGSFVPIPGIDAAVLAQLFEQ-QKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +LG AI++A+ +
Sbjct: 75 SVFALGIMPYISASIIVQLLTVVHPTLAELKKEGEAGKRKINQYTRYGTLGLAIVQAIGI 134
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + + + LV G M + W+ + I+E G G G SL+I GI+
Sbjct: 135 ST-GLPNLMPGLVVNPGIGFTITAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 387
G+ + + + Q + + +L +G + W VV E G R++ + Y A
Sbjct: 194 AGFPSAIGQTIEQARQGDLHF--LLLLAIGAIVVAVTWFVVFFERGQRRIVVNY-----A 246
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP------FWQHVK 441
+ ++P +N +G+ P + + ++ FP +AS GS F Q V
Sbjct: 247 KRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGMVANFLQEVA 306
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P +P +Y +YA + F F
Sbjct: 307 LTLSP-----GQP-LYMVLYAAAIIFFCFF 330
>gi|119025359|ref|YP_909204.1| preprotein translocase subunit SecY [Bifidobacterium adolescentis
ATCC 15703]
gi|118764943|dbj|BAF39122.1| preprotein translocase SecY subunit [Bifidobacterium adolescentis
ATCC 15703]
Length = 457
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 161/335 (48%), Gaps = 21/335 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++ E+R ++ T +I+I RIG FIP PG D ++ Q + S + +G
Sbjct: 18 QALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYTVVQQCVGKMNNASENFIGLVNLFS 77
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 78 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 137
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + A ++ S SV +++V ++ G + W+ + +++ G G
Sbjct: 138 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGLG 197
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G+ W F ++G ++ + + V R+
Sbjct: 198 QGMSILIFMSICSGFLPQLWEIGWGTNGTDGNWGKFA-AVVGTLLVIMILVIYVELAQRR 256
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY + S Y+P IN SG+ P + + +LA P+++A S
Sbjct: 257 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQFGNSD- 310
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q + +N + W Y +YA + F F
Sbjct: 311 -QSWVKWINSNLANTTSVW-YIALYALMIVFFCFF 343
>gi|212697274|ref|ZP_03305402.1| hypothetical protein ANHYDRO_01842 [Anaerococcus hydrogenalis DSM
7454]
gi|212675723|gb|EEB35330.1| hypothetical protein ANHYDRO_01842 [Anaerococcus hydrogenalis DSM
7454]
Length = 423
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 153/293 (52%), Gaps = 10/293 (3%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ ++ + EIR++ + T V+++I R+G IP+P D + + Y VD L
Sbjct: 1 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G LS F LG+ P I ASI+MQ+L ++P +L KEG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRFEELTKEGEAGRKTIQKYTRYMTI 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
AI +A +A + Y +S + +V +L+ G M ++W+ +TI+E G G G S
Sbjct: 121 FLAIFQA--IAITNGLYGAALSSATPFQKLVMNVVLIGGTMLVTWMGETITEKGIGNGVS 178
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
+II +GI+ +TL + L +++ W ++ + V + ++ V +TEG RK+ +Q
Sbjct: 179 IIIFMGIIANVPKTLKTWKTGLHYNTISWLSILV-MAIVVIFIVVFTVRITEGERKIPVQ 237
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
Y A +IP +N SG+ P++ + +LA PS ++ +G
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTISLFMG 285
>gi|113954766|ref|YP_729649.1| preprotein translocase subunit SecY [Synechococcus sp. CC9311]
gi|113882117|gb|ABI47075.1| preprotein translocase, SecY subunit [Synechococcus sp. CC9311]
Length = 439
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 157/331 (47%), Gaps = 34/331 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---------DYLS-FVSGSVDELGDF 204
E+R R+ T L+++ R+G +IP+PG DR Q +L F G + LG
Sbjct: 23 ELRGRVLTTLGLLMLVRLGIYIPMPGIDRVAFEQFIEQGGTLIGFLDIFTGGGISTLG-- 80
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------VFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++VI A Y++ S V V TA LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 134 TIQSVIFAMILRQYAVEGLSDVV-FVFQTALALVTGSMIVMWLSEVITERGIGQGASLVI 192
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I+ + L + + ++ L+ VF I + + V EG R+
Sbjct: 193 FLNIVATLPKALGSTIEKAQTGDRGDVVGIIILVLVFLITIVGIIFVQEGARR------- 245
Query: 384 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A++ +P
Sbjct: 246 LPIVSAKRQVGGTALLPSRQSYLPLKLNAGGVMPIIFASALIFLPITIANVTNNPILIRA 305
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP A PW Y ++ + F+ F
Sbjct: 306 ASALNPSA---ANPWPYAILFFSLILGFSYF 333
>gi|154486767|ref|ZP_02028174.1| hypothetical protein BIFADO_00592 [Bifidobacterium adolescentis
L2-32]
gi|154084630|gb|EDN83675.1| preprotein translocase, SecY subunit [Bifidobacterium adolescentis
L2-32]
Length = 445
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 162/335 (48%), Gaps = 21/335 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++ E+R ++ T +I+I RIG FIP PG D ++ Q + S + +G
Sbjct: 6 QALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYTVVQQCVGKMNNASENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + A ++ S SV +++V ++ G + W+ + +++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGLG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G+ W F ++G ++ + + V R+
Sbjct: 186 QGMSILIFMSICSGFLPQLWEIGWGTNGTDGNWGKFA-AVVGTLLVIMILVIYVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY + S Y+P IN SG+ P + + +LA P+++A G+
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQ-FGNSD 298
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 299 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFF 331
>gi|410727982|ref|ZP_11366175.1| preprotein translocase, SecY subunit [Clostridium sp. Maddingley
MBC34-26]
gi|410597542|gb|EKQ52153.1| preprotein translocase, SecY subunit [Clostridium sp. Maddingley
MBC34-26]
Length = 433
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 172/349 (49%), Gaps = 40/349 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F EIR+R+ T +L+ + R+G +PLPG I DYLS +S S LG
Sbjct: 1 MLQTLRNAFKVPEIRKRILWTILLVAVFRMGSHVPLPG-----INSDYLSKLSQSGGLLG 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIIQLLTVAIPQLEQLSKEGDTGRKKIQNATRY 115
Query: 258 ISLGFAILEAVIVACYSLPYSIYA---------ASHSVKHVMVTAFLLVCGAMTMSWICD 308
+SLG A + L Y IYA +S++ V+V F LV G W+ D
Sbjct: 116 VSLGIAFI---------LAYGIYATISSSGATVGLNSIQKVIVV-FALVVGTTFCMWLGD 165
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWA 367
++ G G G+S++I V I++ T+ M++ Q GS+ + G+ V + T+
Sbjct: 166 QLTVKGIGNGTSVLIFVNIISRVPTTIASMMTLQQAGSASIIEIVLFGVFIVLLLATILY 225
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
++E R++ +QY G K AS + + +IP +I S + ++ + ++ FP
Sbjct: 226 FSLSE--RRIPVQYAG-KFAS-GNSNMVKAQSATHIPLSIIGSAVLAIIFSMSVMDFPKT 281
Query: 428 LASILGSPFWQHVKE-----ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+A++ G + KE + NP + + W+Y +YA FN F
Sbjct: 282 IATLFGG-IGESQKEWAKWILSNPTSVFNQKSWMYVVLYAILTIFFNWF 329
>gi|78780017|ref|YP_398129.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9312]
gi|78713516|gb|ABB50693.1| protein translocase subunit secY/sec61 alpha [Prochlorococcus
marinus str. MIT 9312]
Length = 439
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 40/355 (11%)
Query: 134 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 193
F+N R S ++ F E+R R+ T L+++ R+G +IP+PG DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSF 57
Query: 194 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 247
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAG 117
Query: 248 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 307
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILRQYAIQGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 359
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 360 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 416
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGNATLLPTRQSYLPLKLNAGGVMPII 281
Query: 417 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+ P +A++ G+PF + LNP +S PW Y + + F+ F
Sbjct: 282 FASALIFLPITIANVTGNPFLIKIASSLNPGSS---NPWPYALTFFALILGFSFF 333
>gi|184200281|ref|YP_001854488.1| preprotein translocase subunit SecY [Kocuria rhizophila DC2201]
gi|183580511|dbj|BAG28982.1| preprotein translocase SecY subunit [Kocuria rhizophila DC2201]
Length = 437
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 159/344 (46%), Gaps = 28/344 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 200
+L+ A +F E+R +L T +IVI R+G FIP PG D + Q + G+ D
Sbjct: 1 MLSAFARAFTTPELRNKLLFTLGIIVIYRLGTFIPAPGVDYGNVQQCLAMGNTTGGAYDL 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ F GA L+LS F LG+ P I ASI++Q+L ++P +L +EG G K+ Y ++
Sbjct: 61 VNLFSGGALLQLSVFALGVMPYITASIIVQLLRVVIPRFQELHEEGAQGQTKLTQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
++G A L A V + ++ S+ ++V + G + W+ + I+
Sbjct: 121 TIGLAALNATTVISLARSGNLLGNCPLPVIPDDSLFVLVVMIITMTAGTTVIMWLGERIT 180
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
+ G G G SL+I I + L ++L R W LG+ + +V V V
Sbjct: 181 DRGVGNGMSLLIFTSIAATFPSALGEIL------RTRGWGIFLGVCAIGLVVITCVVFVE 234
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+ R++ +QY A I YIP +N +G+ P++ + +L P++LA
Sbjct: 235 QSQRRIPVQY-----AKRMVGRRTIGGTSTYIPLKVNMAGVIPIIFASSMLMLPTMLAQF 289
Query: 432 L----GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GSP V I N + G P VY T+Y + F F
Sbjct: 290 AMPDDGSPVPGWVNWI-NTYLARGDHP-VYMTVYFLLIVAFTYF 331
>gi|339626645|ref|YP_004718288.1| preprotein translocase subunit SecY [Sulfobacillus acidophilus TPY]
gi|379006097|ref|YP_005255548.1| preprotein translocase subunit SecY [Sulfobacillus acidophilus DSM
10332]
gi|339284434|gb|AEJ38545.1| preprotein translocase, SecY subunit [Sulfobacillus acidophilus
TPY]
gi|361052359|gb|AEW03876.1| preprotein translocase, SecY subunit [Sulfobacillus acidophilus DSM
10332]
Length = 425
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 153/292 (52%), Gaps = 13/292 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS-GSVDELGD 203
NA + S + RRL T +++V+ R+G IP+PG + ++ +L S ++ L
Sbjct: 3 QNAISALQASALTRRLGFTLLMLVVFRLGAHIPIPGVNAGVVQSLFLHGASIFALLNLFS 62
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA LS F L I P I ASI+MQ++ ++P++ + KEG DG +K+ + W+S+G
Sbjct: 63 GGATATLSIFALSIVPYINASIIMQLMTVVLPTVEEWTKEGEDGQKKMTQWTRWLSIGLG 122
Query: 264 ILEAVIVACYSLPYS-----IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
L+A+ V+ Y YS +Y H+V + +T +L+ G+ + W+ + IS+ G G G
Sbjct: 123 FLQALGVSYYLYNYSSNGQYVY-THHTVGSIFLTTLMLLTGSTVLMWVGEQISDRGVGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL++ GI++ ++ +L+Q + + V WP ++ V I+ V V EG RK+
Sbjct: 182 ISLLVLFGIVSRLPYGVH-VLAQYVSAGVLSWPKLIIFAVVAVIIIAAVVYVNEGLRKIP 240
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+QY + + + ++P +N +G+ PV+ LL P +A
Sbjct: 241 VQYPKRVVGRRLYQGT-----NTHLPIRVNQAGVIPVIFAISLLILPYTVAQ 287
>gi|284042824|ref|YP_003393164.1| preprotein translocase subunit SecY [Conexibacter woesei DSM 14684]
gi|283947045|gb|ADB49789.1| preprotein translocase, SecY subunit [Conexibacter woesei DSM
14684]
Length = 423
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 39/342 (11%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
LS++LN +F EIR++L TA+L+ + R+G IP PG + + + +F +G +
Sbjct: 2 LSTILN----AFTVPEIRKKLAFTALLLALYRLGSHIPAPGINSEAVEEIQRNFSNGGIL 57
Query: 200 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
+ G +++ F LGI P + ASI++Q+L +VPSL +L++EG G ++I Y
Sbjct: 58 NFLNLFSGGGLSRIALFALGIMPYVTASIILQLLTVVVPSLERLQREGEVGQQRITQYTR 117
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTIS 311
++++G A +++ + A + +++ VM+ A L G M + W+ + I+
Sbjct: 118 YLTVGLAFAQSIAYVFLFRSFQQSAGASVIENFTLAKVMLIAICLTAGCMLVMWMGELIT 177
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLGLLGVFTIVTMWA 367
+ G G G SL+I I+ G+ + + WW P ++ + + A
Sbjct: 178 QRGIGNGISLMIMASIVAGFPQGVRA-----------WWTSPDPVFKVMMPFLALAIIAA 226
Query: 368 VV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+V V EG R++ +QY + + + Y+P +N +G+ PV+ ++AFP
Sbjct: 227 IVFVQEGQRRIPVQYARRVIGQRMTQGG-----QTYLPLRVNMAGVIPVIFAASIMAFPP 281
Query: 427 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ ++ SP+ + +P W Y A F+ LF
Sbjct: 282 TIGQLINSPWANDMANFFSPSG------WAYLVGEAVFIILF 317
>gi|407474693|ref|YP_006789093.1| preprotein translocase subunit SecY [Clostridium acidurici 9a]
gi|407051201|gb|AFS79246.1| preprotein translocase subunit SecY [Clostridium acidurici 9a]
Length = 425
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 14/320 (4%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDFGAELKLSF 212
E+R+++ T +++ I R+G IP+PG + +I Q + S G +D L GA +
Sbjct: 13 ELRKKMIFTLMMLFIYRVGSSIPVPGINGSVIAQMFDSQAGGLLDFINLMAGGAFKNFTI 72
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
F L I P I ASI++Q+L +PSL +L +EG +G +KI Y ++++ +L A+ A
Sbjct: 73 FALNIYPYITASIILQLLTIAIPSLEELSREGEEGRKKISQYTKYLTI---VLAAIQAAG 129
Query: 273 YSLPYSIYA-ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + A + V +L G + W+ + I+E G G G SL+I VGI++
Sbjct: 130 ISIGFFRQALIKDDFLSIAVVIIVLTAGTAFLMWLGEQITEKGVGNGISLLIFVGIVSRA 189
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
E L KM S + + L+ I+ + +++ EG RK+ +QY A
Sbjct: 190 PEGLIKMFSAVKAGQANIIAVIAFLIIALAII-VGVIMIQEGQRKIPVQY-----AKRVV 243
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 451
+IP + +G+ PV+ +T LL FP I+A F V + L+ +VG
Sbjct: 244 GRKVYGGQSTHIPMKVLMAGVIPVIFSTSLLQFPQIIALFFKGGFADFVNKYLSLNGTVG 303
Query: 452 ARPWVYYTIYAFFVFLFNIF 471
W+Y + + F F
Sbjct: 304 V--WIYSILNVLLIIFFTYF 321
>gi|225621047|ref|YP_002722305.1| preprotein translocase subunit SecY [Brachyspira hyodysenteriae
WA1]
gi|384209992|ref|YP_005595712.1| preprotein translocase subunit SecY [Brachyspira intermedia PWS/A]
gi|189031319|gb|ACD74830.1| putative preprotein SecY translocase [Brachyspira hyodysenteriae
WA1]
gi|225215867|gb|ACN84601.1| preprotein translocase subunit SecY [Brachyspira hyodysenteriae
WA1]
gi|343387642|gb|AEM23132.1| preprotein translocase subunit SecY [Brachyspira intermedia PWS/A]
Length = 446
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 34/337 (10%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VD 199
A F E+R R+ T + I++ RIG IP PG D P L F+S S +
Sbjct: 6 ANIFRVQELRSRILFTVIAILVYRIGSHIPTPGID----PTALLGFLSSSQGGGGLLTIM 61
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++
Sbjct: 62 DLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLT 121
Query: 260 LGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
L I+++ +A + + A + + +++ G M + W+ D I+E G G
Sbjct: 122 LVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQITERGLG 181
Query: 317 QGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G S+II GI+ G + + K S+ L S V + L + + ++ VV E
Sbjct: 182 NGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFCVVYEE 235
Query: 373 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
G R++ +QY A +IPF INPSG+ P++ + L+A P+ +AS+
Sbjct: 236 SGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASL 290
Query: 432 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
W+ + +L S G+ W Y +Y V +F
Sbjct: 291 TRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMF 324
>gi|150015063|ref|YP_001307317.1| preprotein translocase subunit SecY [Clostridium beijerinckii NCIMB
8052]
gi|149901528|gb|ABR32361.1| preprotein translocase, SecY subunit [Clostridium beijerinckii
NCIMB 8052]
Length = 432
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 174/347 (50%), Gaps = 37/347 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L + +F E+R+++ T +L+ + R+G IPLPG I D+L +S S LG
Sbjct: 1 MLQTLSNAFKVPELRKKILWTVLLVAVFRMGSHIPLPG-----INSDFLKNLSQSGGLLG 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIIQLLTVAIPQLEQLSKEGDTGRKKIQNATRY 115
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA-SHSVKHVMVTA-------FLLVCGAMTMSWICDT 309
+SLG A + L Y I+A S S V +TA F LV G W+ D
Sbjct: 116 VSLGIAFI---------LAYGIFATISSSGATVGLTAIQKTIVVFALVVGTTFCMWLGDQ 166
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++ G G G+S++I V I++ T+ M++ Q GS+ + G+ VF + T+
Sbjct: 167 LTVKGIGNGTSILIFVNIISRVPATIASMMTLQQAGSASIVEIVLFGVFTVFLLATILYF 226
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
++E R++ +QY G K AS + + +IP +I S + ++ + ++ FP +
Sbjct: 227 SLSE--RRIPVQYAG-KFASG--NSNMVKSQSTHIPLSIIGSAVLAIIFSMSVMDFPKTI 281
Query: 429 ASI---LGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF 471
A++ +G + K +LN TS+ + W+Y +YA FN F
Sbjct: 282 ATLFGGVGESQKEWAKWVLNNPTSIFNNKSWMYMVLYAVLTIFFNWF 328
>gi|257067040|ref|YP_003153296.1| preprotein translocase subunit SecY [Anaerococcus prevotii DSM
20548]
gi|256798920|gb|ACV29575.1| preprotein translocase, SecY subunit [Anaerococcus prevotii DSM
20548]
Length = 424
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 155/298 (52%), Gaps = 21/298 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
++ AA+ + EIR+R + T +++V+ R+G IP+P D + + Y + VD L
Sbjct: 4 IIKKAAK---EEEIRKRFYFTLLMLVVYRLGNNIPIPFIDTKALADAYNNIQGTLVDYLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G LS F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLSVVIPRLEELSREGEQGRKTIQKYTRYVTI 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
AI +A+ + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G+S
Sbjct: 121 ALAIFQAIAITNGLYGAALSSATGFQKVVM--NIVLIGGTMFVTWMGETITEKGLGNGTS 178
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
LII +GI+ + T+ + Q L ++ + + ++ + V ++EG RKV +Q
Sbjct: 179 LIIFMGIIASFPRTIARW-KQGLHYDTTSIVSIIIMAIIVVLIVLAVVEISEGERKVPIQ 237
Query: 381 Y----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
Y G K+ +IP +N G+ P++ + +LA PS L+ + G
Sbjct: 238 YAKRVVGRKMYGGQ---------STHIPVKVNMGGVMPIIFASAVLAIPSTLSLLFGG 286
>gi|406881747|gb|EKD29730.1| hypothetical protein ACD_78C00300G0002 [uncultured bacterium (gcode
4)]
Length = 439
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 30/343 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR--LIPQDYLSFVSGSVDE 200
+L NA+ + +++ ++ VT LI++ + IP+PG + L +D+L+ G
Sbjct: 2 ILKNASRIWKSKDVKSKIIVTLALIILYKFLSIIPIPGVNTEALLSIKDFLAANQGLAFF 61
Query: 201 LGDFGAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
G L+ S +G++P I A I+MQ+L ++P L L+KEG G +KI +Y WI+
Sbjct: 62 SSLMGGGLEHFSIVLMGLAPYINAVIIMQLLAVVIPQLESLKKEGEQGQKKINNYTRWIT 121
Query: 260 --LGFAILEAVIVACYSL---PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
L FA +I+ +L I S+ V+ + G M + W+ + I+ESG
Sbjct: 122 VPLAFAQSYGMIILLNTLIGGGGKIMDTSNFWGAVLPAMLFITAGTMFLMWLGEVINESG 181
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 373
G GSS+II G+L+G + + +S +G+ +L LL V T+ ++ ++ TEG
Sbjct: 182 IGNGSSMIIFAGVLSGIPSHIMQYIS--VGNYT-----LLALLTVMTLGVVYIIIKFTEG 234
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 432
RK+ L Y R++ + Y P +N +GM P++ ++ FP+++ IL
Sbjct: 235 YRKIPLIY-----TRTGRDE------KSYFPIRVNQAGMIPIIFAVSIVTFPALIGQILS 283
Query: 433 --GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDI 473
GS + + L S+ W+Y IY V F+ F I
Sbjct: 284 NRGSGRSVQIGQFLLEYFSMNNPSWLYIAIYFLLVLGFSFFYI 326
>gi|195952663|ref|YP_002120953.1| preprotein translocase subunit SecY [Hydrogenobaculum sp. Y04AAS1]
gi|195932275|gb|ACG56975.1| preprotein translocase, SecY subunit [Hydrogenobaculum sp. Y04AAS1]
Length = 430
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 158/313 (50%), Gaps = 17/313 (5%)
Query: 144 LNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+NN + F+ E +R+R+ T ++ I R+G IP+PG D + D++S + GS+ L
Sbjct: 1 MNNFLKEIFELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVAL-ADFMSNLKGSLFSLY 59
Query: 203 DF--GAEL-KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWI 258
D G L +++ F LG+ P I ASI+MQ+L +P L +L KE D G +KI Y +I
Sbjct: 60 DIFSGGNLSRMTLFALGVMPYISASIVMQLLSSAIPELQKLAKEEGDYGRQKINEYTKYI 119
Query: 259 SLGFAILEAVIVACY----SLPYSIYAASHS-VKHVMVTAFLLVCGAMTMSWICDTISES 313
++ A +++ +A + + P+ H + V+V +V M + W+ D I+E
Sbjct: 120 TVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVVAVLGMVASTMILVWLGDMITEK 179
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S++I GI+ + E + +S L + + F +G + + V V+ E
Sbjct: 180 GIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAF-VGAILIIIAVIAAIVIFQEA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY R++ Y+P +NP+G+ P++ LL PS + +
Sbjct: 239 ERRIPIQY---PRRQVGRQE--FVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIK 293
Query: 434 SPFWQHVKEILNP 446
+P Q + + NP
Sbjct: 294 NPIAQSIHDAFNP 306
>gi|429123840|ref|ZP_19184372.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30446]
gi|426280409|gb|EKV57424.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30446]
Length = 446
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 34/337 (10%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VD 199
A F E+R R+ T + I++ RIG IP PG D P L F+S S +
Sbjct: 6 ANIFRVQELRSRILFTVIAILVYRIGSHIPTPGID----PAALLGFLSSSQGGGGLLTIM 61
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++
Sbjct: 62 DLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLT 121
Query: 260 LGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
L I+++ +A + + A + + +++ G M + W+ D I+E G G
Sbjct: 122 LVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQITERGLG 181
Query: 317 QGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G S+II GI+ G + + K S+ L S V + L + + ++ VV E
Sbjct: 182 NGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFCVVYEE 235
Query: 373 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
G R++ +QY A +IPF INPSG+ P++ + L+A P+ +AS+
Sbjct: 236 SGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASL 290
Query: 432 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
W+ + +L S G+ W Y +Y V +F
Sbjct: 291 TRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMF 324
>gi|428305853|ref|YP_007142678.1| protein translocase subunit SecY [Crinalium epipsammum PCC 9333]
gi|428247388|gb|AFZ13168.1| protein translocase subunit secY/sec61 alpha [Crinalium epipsammum
PCC 9333]
Length = 447
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 26/342 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDE 200
A E+F + + +R RL VT L+++ R+G IP+PG DR QD S V G +D
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTIGLLILVRLGVHIPIPGIDRARFAQDIQNSPVIGFLDI 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G + F LGI P I ASI++Q+L +P L L+K EG G KI +S
Sbjct: 70 FSGGGIS-AVGIFALGILPYINASIILQLLTAALPYLENLQKNEGEAGRRKISQITRIVS 128
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
L +A+++++ ++ + Y+ S + V TA L G+M + W+ + ++E G G G+
Sbjct: 129 LVWALVQSIGISLWVQRYA--TGSGGLIFVAQTALALTAGSMFVMWVSELVTERGIGNGA 186
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I + I++ +L + L ++ LL VF ++ + V V EG R++
Sbjct: 187 SLLIFINIVSVLPRSLGQTLELAQTGDREILGRVIILLLVFLVMIVGIVFVQEGTRRI-- 244
Query: 380 QYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI----LG 433
+ SA R+ E Y+P +N G+ P++ + +L P+ LA
Sbjct: 245 -----PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPASLAQFTQNSAN 299
Query: 434 SPFWQHVKEILNPETS----VGARPWVYYTIYAFFVFLFNIF 471
+PF + + N + G PW+Y Y F + F+ F
Sbjct: 300 NPFLGGLHQFFNQAANYLSPTGQTPWLYVAFYVFLIVFFSYF 341
>gi|336322771|ref|YP_004602738.1| preprotein translocase subunit SecY [Flexistipes sinusarabici DSM
4947]
gi|336106352|gb|AEI14170.1| preprotein translocase, SecY subunit [Flexistipes sinusarabici DSM
4947]
Length = 438
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 20/325 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+RRR+ T L+++ RIG +P PG + + Q + + SG++ + D GA +L+
Sbjct: 13 ELRRRILFTLALLIVYRIGTHVPTPGINSDAL-QQFFAQQSGNILGMVDMFTGGALSRLT 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L +VP L +L+K+G +G EKI Y + ++G + ++ + +A
Sbjct: 72 VFGLGIMPYISASIIIQLLTVVVPHLAELKKQGSEGQEKITKYTRYGTVGISAVQGLGIA 131
Query: 272 CYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ + V +VTA L G + + W+ + I+E G G G SLII G
Sbjct: 132 IGLEAMNSPTGTAVVMFPGWGFRLVTALTLTTGTVFLMWLGERITEKGIGNGISLIIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ + + + ++ ++ +L + VT V V R++ +QY +
Sbjct: 192 IVARFPAAVANTFRMMQTGELQIITLIV-VLAIILGVTAAIVYVEISSRRLPIQY--VRK 248
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A A ++ Y+P +NP+ + P++ +++FPS L++ + + + +P
Sbjct: 249 AGAGTRGGNVSN--SYLPLKLNPANVIPIIFAASIMSFPSTLSTFSQNSIFSQIGVWFSP 306
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
+ VYY +Y + F F
Sbjct: 307 SSP------VYYILYVVLIVFFTYF 325
>gi|445062100|ref|ZP_21374535.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30599]
gi|444506495|gb|ELV06822.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30599]
Length = 446
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 34/337 (10%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VD 199
A F E+R R+ T + I++ RIG IP PG D P L F+S S +
Sbjct: 6 ANIFRVQELRSRILFTVIAILVYRIGSHIPTPGID----PTALLGFLSSSQGGGGLLTIM 61
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++
Sbjct: 62 DLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLT 121
Query: 260 LGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
L I+++ +A + + A + +++ G M + W+ D I+E G G
Sbjct: 122 LVLCIVQSAAMASWIQSINEGAMIFMDPGIGFILLVVVTATAGTMFLMWLGDQITERGLG 181
Query: 317 QGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G S+II GI+ G + + K S+ L S V + L + + ++ VV E
Sbjct: 182 NGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFCVVYEE 235
Query: 373 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
G R++ +QY A +IPF INPSG+ P++ + L+A P+ +AS+
Sbjct: 236 SGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASL 290
Query: 432 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
W+ + +L S G+ W Y +Y V +F
Sbjct: 291 TRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMF 324
>gi|427714140|ref|YP_007062764.1| protein translocase subunit SecY [Synechococcus sp. PCC 6312]
gi|427378269|gb|AFY62221.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp. PCC
6312]
Length = 436
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 169/338 (50%), Gaps = 29/338 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+A E+F + + +R R+ VT L+++ R+G ++P+PG DR++ + + SV
Sbjct: 10 SAQETFMQMAQAAGLRSRVLVTLGLLILVRLGIYLPVPGIDRQVFAA---AVQNNSVIRF 66
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWW 257
D G L F LGI P I ASI+MQ++ +PSL +L+K EG G KI +
Sbjct: 67 LDIFSGGGISALGIFALGILPYINASIIMQLMTAALPSLERLQKDEGEAGRRKISQITRY 126
Query: 258 ISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++LG+AI+++ +A + S+P + A + + TA L G+M + W+ + I+E G
Sbjct: 127 VALGWAIIQSTGIAIFVNSIPGA--ALTPGSLFLAETALALTAGSMFVMWVSELITERGI 184
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ ++ + ++ L S ++ L VF ++ + V V EG R
Sbjct: 185 GNGASLLIFLSIVAYLPSSVGQTIA--LAESGGSIGGIIVLALVFLVMIVGIVFVQEGTR 242
Query: 376 KVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 243 RI-------PIVSARRQVGRRLYREQTSYLPLRLNQGGVMPIIFASAMLILPSTLAQFSQ 295
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V L+P G PWVY Y + F+ F
Sbjct: 296 NAVVAQVAAYLSPG---GPTPWVYVMFYLVLILFFSYF 330
>gi|386866609|ref|YP_006279603.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. animalis ATCC 25527]
gi|385700692|gb|AFI62640.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. animalis ATCC 25527]
Length = 449
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 166/337 (49%), Gaps = 25/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP PG D +++ + + + + +G
Sbjct: 6 QAFRTKELRNKILFVLGIIIIYRIGSFIPTPGVDYKVVNDCVANTTNNAENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVVQLLRAVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 264 ILEA--VIVACYSLPYSIYAASH-----SVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ ++V S Y S+ S+ +++V ++ G + W+ + I+E G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSNVIPDASIWNMVVMIMVMTGGTGLIMWMAELITEKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G+ W F + + V ++ ++ V R+
Sbjct: 186 QGMSILIFLSICSGFLPQLWQIGWGTNGADGNWTKFAI-VTVVLLVIMIFVNYVELSQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ +QY + S Y+P IN SG+ P + + +LA P++ A S
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLFAQFGNSQQ 299
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q V + L TSV W Y +YA + F F
Sbjct: 300 SWVQWVNKYLANTTSV----W-YICLYALMIVFFTFF 331
>gi|330444131|ref|YP_004377117.1| preprotein translocase subunit SecY [Chlamydophila pecorum E58]
gi|328807241|gb|AEB41414.1| preprotein translocase SecY subunit [Chlamydophila pecorum E58]
Length = 457
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 42/356 (11%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--EL 201
+ + F SE+R++LF T L+ R+G FIP+PG + + + S + +L
Sbjct: 1 MTTLKQIFSISELRQKLFYTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQL 60
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLV-QLRKEGLDGHEKIKSYIWW 257
D GA +++ LG+ P I ASI++Q+L +PSL +LR+ G +I
Sbjct: 61 ADIFSGGAFAQMTVIALGVVPYISASIIVQLLLVFMPSLQRELRESPDQGKRRIGRLTRM 120
Query: 258 ISLGFAILEAVIVACYSLPYSI--------YAASHSVKHV-----MVTAFLLVCGAMTMS 304
++G AI+++++ A ++L ++ S + V M T ++ G + +
Sbjct: 121 FTVGLAIVQSLLFAKFALRMNLTIPGIVLPILVSPQIFGVPLLFYMTTVIVMTTGTLLLM 180
Query: 305 WICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLL------ 357
WI + IS+ G G G SLII +GIL + L ++++L LGS P LGL+
Sbjct: 181 WIGEQISDKGIGNGISLIIALGILASFPSVLGSIVNKLHLGSQ---DPSDLGLVSILLLC 237
Query: 358 GVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLT 417
VF V + +++ EG RK+ +QY R + P Y+P +N +G+ PV+
Sbjct: 238 AVFVFVLIATILIIEGVRKIPVQY---ARRVIGRREVP--GGGSYLPLKVNYAGVIPVIF 292
Query: 418 TTYLLAFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ LL FP+ + + S + + V +L+P + WVY +Y F + F F
Sbjct: 293 ASSLLMFPATIGQFMSSESSWIKRVASMLSPGS------WVYSLLYVFLIIFFTYF 342
>gi|33864017|ref|NP_895577.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9313]
gi|33635601|emb|CAE21925.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 439
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 18/323 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E+R R+ T L++ R+G +IP+PG DR Q +L + L F G L
Sbjct: 23 ELRGRVLTTLGLLLFIRLGIYIPMPGIDRVAF-QSFLQQGGQLIGFLDIFTGGGISTLGI 81
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++++VI A
Sbjct: 82 FALGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVIFA 141
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
Y++ S V V+ TA LV G+M + W+ + I++ G GQG+SL+I + I+
Sbjct: 142 LILRQYAVEGLSEVV-FVVQTALALVTGSMIVMWMSEIITDRGIGQGASLVIFLNIVATL 200
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ L + + ++ L+ VF + + + V EG R+ + SA R
Sbjct: 201 PKALASTIEKAQTGDRGDVVGIIVLVMVFLMTIVGIIFVQEGSRR-------LPIVSAKR 253
Query: 392 E---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+ + + + Y+P +N G+ P++ + L+ P +A+ +P LNP
Sbjct: 254 QIGGTNLLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIRAASTLNPSA 313
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
A PW Y ++ + F+ F
Sbjct: 314 ---ANPWPYALVFFALIVGFSYF 333
>gi|378787335|gb|AFC39966.1| preprotein translocase subunit SecY [Porphyra umbilicalis]
Length = 411
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 170/332 (51%), Gaps = 42/332 (12%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T L++++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIVFTLFLLILARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L I+P+L +L+K EG G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIIPTLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + P Y + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSSAISIWVKP---YVFNWNFAFVCESILALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ANYNNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A P+ L + +P
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNPLVLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + P S +Y +Y+ + F+ F
Sbjct: 281 ILYLFCPNGS------LYLVLYSALILFFSYF 306
>gi|354565812|ref|ZP_08984986.1| preprotein translocase, SecY subunit [Fischerella sp. JSC-11]
gi|353548685|gb|EHC18130.1| preprotein translocase, SecY subunit [Fischerella sp. JSC-11]
Length = 440
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 176/346 (50%), Gaps = 39/346 (11%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R RL VT ++++ R+G IP+PG DR Q + + ++ S +++
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILIRLGIHIPIPGIDR----QAFAAAIN-SNNQV 63
Query: 202 GDF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSY 254
F G L F LGI P I ASI++Q+L +P L L+K EG G +I
Sbjct: 64 FSFLDIFSGGGLSALGVFALGILPYINASIIIQLLTAAIPYLENLQKNEGEAGRRRISQI 123
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++SLG+AIL++V +A + L +A + V+ TA LV G+M + W + I+E G
Sbjct: 124 TRYVSLGWAILQSVFLAAFWL--RPFALNFGPVFVIETAVALVAGSMFVMWASEVITERG 181
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSV-----RWWP-FMLGLLGVFTIVTMWAV 368
G G+SL+I V I+ ++L ++ + GS R P +L L+ +FTIV + V
Sbjct: 182 VGNGASLLIFVNIVATLPKSLSDTIAYIQGSGQEIVRERVGPVIVLVLVFLFTIVGI--V 239
Query: 369 VVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
V E R++ + SA R+ E Y+P +N G+ P++ +L+ P
Sbjct: 240 FVQEAIRRI-------PIISARRQVGRRIFAEQRSYLPLRLNQGGVMPIIFAAAILSLPL 292
Query: 427 ILASILGSPFWQHVKEILNPETS-VGARPWVYYTIYAFFVFLFNIF 471
+A+ +P + I+N S G++ WVY +Y + F+ F
Sbjct: 293 FIANFTKNP---ELANIINTYLSPGGSQSWVYALVYLVSIIFFSYF 335
>gi|197122359|ref|YP_002134310.1| preprotein translocase subunit SecY [Anaeromyxobacter sp. K]
gi|196172208|gb|ACG73181.1| preprotein translocase, SecY subunit [Anaeromyxobacter sp. K]
Length = 447
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 42/345 (12%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
AA F +E+R+RL T ++ + R+G F+ PG DRR + QD ++ GS+ L
Sbjct: 3 AASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAM-QDVVA-QQGSLLGLL 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+F GA +LS F LGI P + ASI++Q+L +VPSL +++KEG G KI Y + +
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHV--------MVTAFLLVCGAMTMSWICDTIS 311
+ + ++ +A Y A + V V ++T L G + W+ + I+
Sbjct: 121 VILSAIQGYGIATY---LESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQIT 177
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G SLII GI+ +Y + QL S + L +L +V + A+V
Sbjct: 178 ERGVGNGISLIIFAGIVARIPAAIYTTVRQLGASGSQLSALGLLVLTALMVVVIGAIVYV 237
Query: 372 E-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
E G R++ +QY G KL ++P +N SG+ P + + LL P+
Sbjct: 238 ERGQRRIPIQYAKRMVGRKLYGGQ---------STHLPLKVNTSGVIPPIFASSLLLLPA 288
Query: 427 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+A PF Q + ++ A W+Y TIY + F F
Sbjct: 289 TMAGWF--PFLQRMSN------AIQAGSWIYNTIYVALIIFFAYF 325
>gi|260914660|ref|ZP_05921126.1| preprotein translocase [Pasteurella dagmatis ATCC 43325]
gi|260631259|gb|EEX49444.1| preprotein translocase [Pasteurella dagmatis ATCC 43325]
Length = 441
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E++ RL + +++ RIG FIP+PG D ++ Q +D F GA + S
Sbjct: 17 GELKNRLLFVLIALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRAS 76
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV +A
Sbjct: 77 IFALGIMPYISASIIIQLLTTVHPALAELKKEGETGRRKISKYTRYSTLVLATLQAVGIA 136
Query: 272 CYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
LP + + + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 137 T-GLPNMLPGLVPNLDIWFYITAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + P +L L+ V VT + V V G R++K++Y A
Sbjct: 196 GLPSAIGQTIEQARQGQMH--PLVLLLIAVIVFAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ LA LG + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|150392140|ref|YP_001322189.1| preprotein translocase subunit SecY [Alkaliphilus metalliredigens
QYMF]
gi|149952002|gb|ABR50530.1| preprotein translocase, SecY subunit [Alkaliphilus metalliredigens
QYMF]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 167/325 (51%), Gaps = 25/325 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
++R ++ T +++VI R+G IP+PG D ++ + S+ +L GA ++ F
Sbjct: 13 DLRGKILYTMMMLVIFRLGSVIPVPGIDIEVVRNIVGNAQLFSLLDLFSGGAFGNMTIFA 72
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
L I+P I ASI+MQ+L +P+L +L KEG +G +KI Y + ++ A+++A ++
Sbjct: 73 LSITPYITASIIMQLLTIAIPALEELSKEGEEGRKKIAQYQRYGTVVLALIQATGISIGL 132
Query: 275 LPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
+ I + S+ V++T L G + W+ + I+E G G G SL+I GI++ +
Sbjct: 133 FRQALIQTDAFSIIVVILT---LTAGTAFLMWLGEQITEKGIGNGISLLIFAGIVSRVPD 189
Query: 334 TLYK--MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLA 387
++Y+ +L+Q S+ ++ L + +V V++TEG RK+ +QY G K+
Sbjct: 190 SVYRTYVLAQQGEISIIS---IIAFLAIAVLVIAAVVLITEGVRKIPVQYAKRVVGRKMY 246
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNP 446
+IP +N +G+ PV+ LL+FP I+ S GS F V L P
Sbjct: 247 GGQSS---------HIPLKVNQAGVIPVIFAMSLLSFPQIVGSFFPGSGFEGFVNRFLTP 297
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
T +G ++Y + A + F F
Sbjct: 298 STGMGT--FIYVMMQAVLIIFFTYF 320
>gi|329893619|ref|ZP_08269753.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [gamma
proteobacterium IMCC3088]
gi|328923546|gb|EGG30858.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [gamma
proteobacterium IMCC3088]
Length = 443
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 146/288 (50%), Gaps = 19/288 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
E+ RL V ++I RIG IP+PG D + Q + G++ L + GA ++
Sbjct: 16 GELFARLRFVLVALIIYRIGTHIPVPGIDPAQL-QALFNSNQGTILGLANMFSGGALERM 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--- 267
S LGI P I ASI+MQ++ + PSL QL+KEG G KI Y ++++G AI++A
Sbjct: 75 SILALGIMPYISASIIMQLMSAVTPSLEQLKKEGESGRRKISQYTRYLTVGLAIIQATGM 134
Query: 268 -VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
V +A + YS+ + + +T+ LV GA+ M W+ + I+E G G G SL+I G
Sbjct: 135 TVGMANQGMAYSVSPVFYVIA---ITS--LVTGAIFMMWLGEQITERGVGNGISLLIFAG 189
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + L Q + +LG+L + +V + + G R++ + Y
Sbjct: 190 IVAGLPSAIGQSLEQARQGELNIL-VLLGILALAIVVIYLIIFIERGQRRITVNY----- 243
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A R + ++P +N +G+ P + + +L FP+ +A GS
Sbjct: 244 AKQQRGNRMYQAQSSHLPLKVNMAGVIPAIFASSILLFPASIAQWFGS 291
>gi|434383102|ref|YP_006704885.1| preprotein translocase SecY [Brachyspira pilosicoli WesB]
gi|404431751|emb|CCG57797.1| preprotein translocase SecY [Brachyspira pilosicoli WesB]
Length = 446
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 34/330 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VDELGDFGA 206
E+R R+ T + I++ RIG IP PG D P L F+S + + +L GA
Sbjct: 13 ELRSRILFTVLAILVYRIGSHIPTPGID----PTALLGFLSSAQGGGGLLTIMDLFSGGA 68
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+ S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++LG +++
Sbjct: 69 LFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLTLGLCVVQ 128
Query: 267 AVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ +A + + A + +++ G M + W+ D I+E G G G S+II
Sbjct: 129 SAAMASWIQSINEGAMIFMRPGLGFILLVVITATTGTMFLMWLGDQITERGLGNGISVII 188
Query: 324 CVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 378
GI+ G+ + + K + L S V + L + + ++ VV E G R++
Sbjct: 189 FAGIVARIPAGFYDVIQKKDTDYLNSLV------IVLFFIIFAIVIFCVVYEESGQRRIP 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY A +IPF INPSG+ P++ + L+A P+ +AS+ W+
Sbjct: 243 VQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWR 297
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ +L S G+ W Y +Y V +F
Sbjct: 298 WLDALLR-FFSYGS--WAYIILYCLLVIMF 324
>gi|220917141|ref|YP_002492445.1| preprotein translocase subunit SecY [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954995|gb|ACL65379.1| preprotein translocase, SecY subunit [Anaeromyxobacter dehalogenans
2CP-1]
Length = 447
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 42/345 (12%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
AA F +E+R+RL T ++ + R+G F+ PG DRR + QD ++ GS+ L
Sbjct: 3 AASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAM-QDVVA-QQGSLLGLL 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+F GA +LS F LGI P + ASI++Q+L +VPSL +++KEG G KI Y + +
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHV--------MVTAFLLVCGAMTMSWICDTIS 311
+ + ++ +A Y A + V V ++T L G + W+ + I+
Sbjct: 121 VILSAIQGYGIATY---LESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQIT 177
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G SLII GI+ +Y + QL S + L +L +V + A+V
Sbjct: 178 ERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYV 237
Query: 372 E-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
E G R++ +QY G KL ++P +N SG+ P + + LL P+
Sbjct: 238 ERGQRRIPIQYAKRMVGRKLYGGQ---------STHLPLKVNTSGVIPPIFASSLLLLPA 288
Query: 427 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+A PF Q + ++ A W+Y TIY + F F
Sbjct: 289 TMAGWF--PFLQRMSN------AIQAGSWIYNTIYVALIIFFAYF 325
>gi|87124981|ref|ZP_01080828.1| preprotein translocase SecY subunit [Synechococcus sp. RS9917]
gi|86167301|gb|EAQ68561.1| preprotein translocase SecY subunit [Synechococcus sp. RS9917]
Length = 439
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 157/331 (47%), Gaps = 34/331 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----------FVSGSVDELGDF 204
E+R R+ T L+++ R+G +IP+PG DR Q F G + LG
Sbjct: 23 ELRSRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFLQQGGQLIGFLDIFTGGGISTLG-- 80
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------VFALGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++++ A Y++ S +V V+ TA LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 134 LIQSIVFAMILRQYAVEGLSDTV-FVVQTALALVTGSMVVMWLSEVITERGIGQGASLVI 192
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I+ + L + + ++ L+ VF + + + V EG R+
Sbjct: 193 FLNIVATLPQALGATIEKAQTGDRNDVVGIIVLVLVFLVTIVGIIFVQEGARR------- 245
Query: 384 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A++ +P
Sbjct: 246 LPIVSAKRQVGGTALLPSRQSYLPLKLNAGGVMPIIFASALIFLPLTIANVTKNPLLIRA 305
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP A PW Y ++ + F F
Sbjct: 306 ASALNPSA---ANPWPYALLFFALILGFAYF 333
>gi|300870627|ref|YP_003785498.1| preprotein translocase SecY [Brachyspira pilosicoli 95/1000]
gi|404475025|ref|YP_006706456.1| preprotein translocase SecY [Brachyspira pilosicoli B2904]
gi|431808545|ref|YP_007235443.1| preprotein translocase SecY [Brachyspira pilosicoli P43/6/78]
gi|300688326|gb|ADK30997.1| preprotein translocase, SecY [Brachyspira pilosicoli 95/1000]
gi|404436514|gb|AFR69708.1| preprotein translocase SecY [Brachyspira pilosicoli B2904]
gi|430781904|gb|AGA67188.1| preprotein translocase SecY [Brachyspira pilosicoli P43/6/78]
Length = 446
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 34/330 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VDELGDFGA 206
E+R R+ T + I++ RIG IP PG D P L F+S + + +L GA
Sbjct: 13 ELRSRILFTVLAILVYRIGSHIPTPGID----PTALLGFLSSAQGGGGLLTIMDLFSGGA 68
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+ S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++LG +++
Sbjct: 69 LFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLTLGLCVVQ 128
Query: 267 AVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ +A + + A + +++ G M + W+ D I+E G G G S+II
Sbjct: 129 SAAMASWIQSINEGAMIFMRPGLGFILLVVITATTGTMFLMWLGDQITERGLGNGISVII 188
Query: 324 CVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 378
GI+ G+ + + K + L S V + L + + ++ VV E G R++
Sbjct: 189 FAGIVARIPAGFYDVIQKKDTDYLNSLV------IVLFFIIFAIVIFCVVYEESGQRRIP 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY A +IPF INPSG+ P++ + L+A P+ +AS+ W+
Sbjct: 243 VQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWR 297
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ +L S G+ W Y +Y V +F
Sbjct: 298 WLDALLR-FFSYGS--WAYIILYCLLVIMF 324
>gi|124024014|ref|YP_001018321.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9303]
gi|123964300|gb|ABM79056.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 439
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 18/323 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E+R R+ T L++ R+G +IP+PG DR Q +L + L F G L
Sbjct: 23 ELRGRVLTTLGLLLFIRLGIYIPMPGIDRVAF-QSFLQQGGQLIGFLDIFTGGGISTLGI 81
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++++VI A
Sbjct: 82 FALGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVIFA 141
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
Y++ S V V+ TA LV G+M + W+ + I++ G GQG+SL+I + I+
Sbjct: 142 LILRQYAVEGLSEVV-FVVQTALALVTGSMIVMWMSEIITDRGIGQGASLVIFLNIVATL 200
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ L + + ++ L+ VF + + + V EG R+ + SA R
Sbjct: 201 PKALASTIEKAQTGDRGDVVGIIVLVMVFLMTIVGIIFVQEGSRR-------LPIVSAKR 253
Query: 392 E---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+ + + + Y+P +N G+ P++ + L+ P +A+ +P LNP
Sbjct: 254 QIGGTNLLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIRAASTLNPGA 313
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
A PW Y ++ + F+ F
Sbjct: 314 ---ANPWPYALVFFALIVGFSYF 333
>gi|418327360|ref|ZP_12938521.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
14.1.R1.SE]
gi|365233091|gb|EHM74058.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
14.1.R1.SE]
Length = 430
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 159/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEQSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ +I NP +++G +V I +A+F
Sbjct: 298 NIADIANPSSNIGMIIYVVLIIAFAYF 324
>gi|294675879|ref|YP_003576494.1| preprotein translocase subunit SecY [Rhodobacter capsulatus SB
1003]
gi|294474699|gb|ADE84087.1| preprotein translocase, SecY subunit [Rhodobacter capsulatus SB
1003]
Length = 456
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 29/330 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 210
+++R R+F T L++I R+G +IP+PG D + +D++ S G + + GA ++
Sbjct: 21 TDLRARIFFTIGLLIIYRLGTYIPVPGIDADAL-RDFMERASQGIGGMLSMFTGGALGRM 79
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q++ +VP+L Q++KEG G +KI + ++G A +A
Sbjct: 80 GVFALGIMPYISASIIVQLMTALVPALEQMKKEGEQGRKKINQITRYSTVGLATFQA--- 136
Query: 271 ACYSLPYSIY---AASHSVKH---VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+ L S+Y A+ +V H ++ LV G M + W+ + I+ G G G SLII
Sbjct: 137 --WGLATSLYNGGMATDAVPHLFFIVSVVVTLVGGTMFLMWLGEQITARGIGNGVSLIIF 194
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
VGI+ +Q + P +G+L + V + V + RK+ +QY
Sbjct: 195 VGIVAEIPAAAASFFAQGRAAGNSSIPVTIGVLVMMIAVIAFVVFMERALRKIHIQYPRR 254
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVK 441
++ + S ++P +NP+G+ P + + LL P+ +++ G P +
Sbjct: 255 QVGMKIYDGS-----SSHLPIKVNPAGVIPAIFASSLLLLPTTISTFSGDNTGPIMSTIL 309
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P +P +Y YA + F F
Sbjct: 310 AYFGP-----GQP-LYLAFYAGMIVFFAYF 333
>gi|196228474|ref|ZP_03127341.1| preprotein translocase, SecY subunit [Chthoniobacter flavus
Ellin428]
gi|196227877|gb|EDY22380.1| preprotein translocase, SecY subunit [Chthoniobacter flavus
Ellin428]
Length = 504
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 171/354 (48%), Gaps = 43/354 (12%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS----GSVDELGD 203
+ +F E+R R+ T +L+V+ R+G I PG + ++ + + + VS G+ L +
Sbjct: 6 SNTFKIPELRSRIIFTLILLVVVRVGAVITCPGVNAAVLQEWFSTQVSNDTGGNAAALFN 65
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + F LG+ P I ASI++Q+L +VPSL +L KE G +KI Y + ++
Sbjct: 66 IFSGGALENCAVFSLGVMPYISASIMLQLLTAVVPSLGKLSKED-GGRQKIMQYTRYATI 124
Query: 261 GFAILEAVIVA-CYSLPYS---IYAASHSVKHV-------------MVTAFLLVCGAMTM 303
I + ++A + P + ++ ++K + ++T L G M +
Sbjct: 125 ALCIFQGYLLALTFENPANNPFLHGIMDTIKKMGIPLVSDPGIAFRVMTVLTLTAGTMFL 184
Query: 304 SWICDTISESGFGQGSSLIICVGILTGYTETL---YKMLSQLLGSSVRWWPFMLGLLGVF 360
W+ D I++ G G G S+II VGI+ L ++ G + P +L + F
Sbjct: 185 MWVGDQITDRGVGNGMSMIITVGIVARLPAGLMQAWRTFVPTAGKGAQVQPIVLVAMLAF 244
Query: 361 TIVTMWAVV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTT 419
I+ + AV+ VT+ RK+ +QY K + T+ Y+P +N +G+ P++
Sbjct: 245 LIIVIAAVICVTQAQRKISVQYA--KRVVGQKVYGGQTQ---YMPLKVNYAGVMPIIFAQ 299
Query: 420 YLLAFPSILASIL--GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LL FPS +AS SP Q++ L W++YT+YA +F F+ F
Sbjct: 300 ALLVFPSTIASTAFKTSPLAQNIAAALT-------HGWIHYTVYAAMIFFFSYF 346
>gi|124026690|ref|YP_001015805.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
NATL1A]
gi|123961758|gb|ABM76541.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
NATL1A]
Length = 439
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 18/327 (5%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 205
F E+R R+F T L++I R+G +IP+PG DR + + +F+ +G G
Sbjct: 19 FSNEELRGRVFTTLGLLLIVRLGIYIPMPGIDR----EAFKNFIDQGGQLIGFLDIFTGG 74
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 264
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ +
Sbjct: 75 GISTLGVFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGL 134
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+++ + A Y+I S S + V+ T+ LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 135 VQSTVFALILRQYAIEGISES-EFVIQTSLALVTGSMIVMWLSEIITEKGIGQGASLVIF 193
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
+ I+ + L + + ++ LL VF I + + V EG R++ +
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRADVLGIIILLIVFLITIVGIIFVQEGARRIPIVSAKS 253
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
++ A S + Y+P +N G+ P++ + L+ P +A+ +P L
Sbjct: 254 QMGGGALLPSR----QSYLPLKLNAGGVMPIIFASALIFLPITIANFTQNPLLIKAASSL 309
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
NP +S PW Y + + F F
Sbjct: 310 NPGSS---NPWPYAITFFALILGFAYF 333
>gi|86158349|ref|YP_465134.1| preprotein translocase subunit SecY [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774860|gb|ABC81697.1| protein translocase subunit secY/sec61 alpha [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 447
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 165/345 (47%), Gaps = 42/345 (12%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
AA F +E+R+RLF T ++ + R+G F+ PG DRR + QD ++ GS+ L
Sbjct: 3 AASGLFNIFRIAELRKRLFFTLGMLAVYRLGIFVTTPGVDRRAM-QDVVA-QQGSLLGLL 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+F GA +LS F LGI P + +SI++Q+L +VPSL +++KEG G KI Y + +
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSSSIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHV--------MVTAFLLVCGAMTMSWICDTIS 311
+ + ++ +A Y A + V V ++T L G + W+ + I+
Sbjct: 121 VVLSAIQGYGIATY---LESLRAGNGVAVVGEPGWGFRLLTMVSLAAGTAFIMWMGEQIT 177
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G SLII GI+ +Y + QL S + L +L +V + A+V
Sbjct: 178 ERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLTGLGLLVLTALMVVVIGAIVYV 237
Query: 372 E-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
E G R++ +QY G KL ++P +N SG+ P + + LL P+
Sbjct: 238 ERGQRRIPIQYAKRMVGRKLYGGQ---------STHLPLKVNTSGVIPPIFASSLLLLPA 288
Query: 427 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LA PF Q + ++ A W+Y TIY + F F
Sbjct: 289 TLAGWF--PFLQRMSN------AIQAGSWIYNTIYVALIIFFAYF 325
>gi|352096503|ref|ZP_08957330.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8016]
gi|351676153|gb|EHA59307.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8016]
Length = 439
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 157/331 (47%), Gaps = 34/331 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---------DYLS-FVSGSVDELGDF 204
E+R R+ T L+++ R+G +IP+PG DR Q +L F G + LG
Sbjct: 23 ELRGRVLTTLGLLMLVRLGIYIPMPGIDRVAFEQFIEQGGTLIGFLDIFTGGGISTLG-- 80
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------VFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++VI A Y++ S V V+ TA LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 134 TVQSVIFAMILRQYAVEGLSDVV-FVVQTALALVTGSMIVMWLSEVITERGIGQGASLVI 192
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I+ + L + + ++ L+ VF I + + V EG R+
Sbjct: 193 FLNIVATLPKALGSTIEKAQTGDRGDVVGIIVLVLVFLITIVGIIFVQEGARR------- 245
Query: 384 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A++ +P
Sbjct: 246 LPIVSAKRQVGGTALLPSRQSYLPLKLNAGGVMPIIFASALIFLPITIANVTNNPILIRA 305
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP A PW Y ++ + F F
Sbjct: 306 ASALNPGA---ANPWPYAIVFFSLILGFAYF 333
>gi|183601964|ref|ZP_02963333.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis HN019]
gi|219682877|ref|YP_002469260.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis AD011]
gi|241190453|ref|YP_002967847.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195859|ref|YP_002969414.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384190685|ref|YP_005576433.1| SecY protein [Bifidobacterium animalis subsp. lactis BB-12]
gi|384191827|ref|YP_005577574.1| SecY protein [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384193453|ref|YP_005579199.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BLC1]
gi|384195009|ref|YP_005580754.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis V9]
gi|387820320|ref|YP_006300363.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis B420]
gi|387821987|ref|YP_006301936.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis Bi-07]
gi|423678975|ref|ZP_17653851.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BS 01]
gi|183218849|gb|EDT89491.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620527|gb|ACL28684.1| preprotein translocase SecY subunit [Bifidobacterium animalis
subsp. lactis AD011]
gi|240248845|gb|ACS45785.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250413|gb|ACS47352.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|289178177|gb|ADC85423.1| SecY [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793440|gb|ADG32975.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis V9]
gi|340364564|gb|AEK29855.1| SecY [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282312|gb|AEN76166.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BLC1]
gi|366042164|gb|EHN18645.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BS 01]
gi|386653021|gb|AFJ16151.1| Preprotein translocase secY subunit [Bifidobacterium animalis
subsp. lactis B420]
gi|386654595|gb|AFJ17724.1| Preprotein translocase secY subunit [Bifidobacterium animalis
subsp. lactis Bi-07]
Length = 449
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 166/337 (49%), Gaps = 25/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP PG D +++ + + + + +G
Sbjct: 6 QAFRTKELRNKILFVLGIIIIYRIGSFIPTPGVDYKVVNDCVANTTNNAENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVVQLLRAVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 264 ILEA--VIVACYSLPYSIYAASH-----SVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ ++V S Y ++ S+ +++V ++ G + W+ + I+E G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCNNVIPDASIWNMVVMIMVMTGGTGLIMWMAELITEKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G+ W F + + V ++ ++ V R+
Sbjct: 186 QGMSILIFLSICSGFLPQLWQIGWGTNGTDGNWTKFAI-VTVVLLVIMIFVNYVELSQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ +QY + S Y+P IN SG+ P + + +LA P++ A S
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLFAQFGNSQQ 299
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q V + L TSV W Y +YA + F F
Sbjct: 300 SWVQWVNKYLANTTSV----W-YICLYALMIVFFTFF 331
>gi|90994487|ref|YP_536977.1| preprotein translocase subunit SecY [Pyropia yezoensis]
gi|122194692|sp|Q1XDJ1.1|SECY_PORYE RecName: Full=Protein translocase subunit SecY
gi|90819051|dbj|BAE92420.1| Preprotein translocase subunit [Pyropia yezoensis]
Length = 411
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 168/332 (50%), Gaps = 42/332 (12%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L IVP+L +L+K EG G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + P Y + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKP---YVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ASYSNASLKFGLF----IAIFLLMIIITICVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A PS L I+ +
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + P S +Y +Y + F+ F
Sbjct: 281 ILYLFCPNGS------LYLLLYCALILFFSYF 306
>gi|119484814|ref|ZP_01619296.1| preprotein translocase SecY [Lyngbya sp. PCC 8106]
gi|119457632|gb|EAW38756.1| preprotein translocase SecY [Lyngbya sp. PCC 8106]
Length = 435
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 161/342 (47%), Gaps = 38/342 (11%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--------- 192
A E+F + + +R R+ VT L+++ R+G F+P+PG DR + +
Sbjct: 10 TAQETFLQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRAAFSANIQNSPVIGFLDL 69
Query: 193 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 251
FV G + LG F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FVGGGLSALG---------IFALGILPFINASIIMQLMTAALPTLEDLQKNEGEAGRRKI 120
Query: 252 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
+++ G+++L+++ +A + P++ + V++ L GAM + W+ + I+
Sbjct: 121 SQITRYVAFGWSVLQSIGLALWVSPFAESPGPLFMAEVVLA---LSAGAMFVMWVSELIT 177
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G+SL+I V I+ +L + ++ LL +F + + V V
Sbjct: 178 ERGIGNGASLLIFVNIVAVLPRSLGNTIELAQSGDRAIVGRVIILLLIFLAMIVGIVFVQ 237
Query: 372 EGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
EG R++ + SA R+ E Y+P +N G+ P++ + +L P+ L+
Sbjct: 238 EGTRRI-------PIVSARRQVGRKLYREKTSYLPLRLNQGGVMPIIFASAVLILPASLS 290
Query: 430 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + L+P G PW+Y Y + F+ F
Sbjct: 291 QFTNNPILVQIATALSPS---GPTPWLYAAFYLVLILFFSYF 329
>gi|320526888|ref|ZP_08028078.1| preprotein translocase, SecY subunit [Solobacterium moorei F0204]
gi|320132856|gb|EFW25396.1| preprotein translocase, SecY subunit [Solobacterium moorei F0204]
Length = 427
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 164/335 (48%), Gaps = 32/335 (9%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAEL 208
S FK+ E R R+F T +++I R+G +P+PG + + Q + S+ + GA
Sbjct: 7 SLFKNKETRNRIFFTLAMLLIYRVGAALPVPGVNTETLAQSLANNSLLSIMNMLGGGALE 66
Query: 209 KLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS F +G++P I ASI++Q+L ++PSL ++ K G G KI+ ++ + A ++A
Sbjct: 67 RLSIFAMGVTPYITASIIIQLLSMDVIPSLTEMTKSGQTGRMKIERITRYLGVVLAFVQA 126
Query: 268 VIVACYSLPYSI-----YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
YSL Y + ++ + TA ++ G+M + WI D IS G G G S+I
Sbjct: 127 -----YSLVYGFDKQYRVLTNANLSGYLYTATVMTAGSMFLIWIGDRISMKGIGNGLSII 181
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG------VFTIVTMWAVVVTEGCRK 376
I GI++ ++ L G + + F G+L ++ V ++ +++ RK
Sbjct: 182 IFAGIVSNMPAAFMQVYQILAGGTTQGELFN-GILQFALYCVLYLTVVVFVIIMETAVRK 240
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY +SAAR S IT ++P IN + + PV+ ++ P I+ S + +
Sbjct: 241 IPIQYTN---SSAARSGSDIT----FLPLKINSASVIPVIFAQSIMMVPQIVISFINTDL 293
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + L+ T G +YA LF F
Sbjct: 294 YNKLSQWLSLSTPTG------LGLYALLTILFTFF 322
>gi|443313550|ref|ZP_21043161.1| protein translocase subunit secY/sec61 alpha [Synechocystis sp. PCC
7509]
gi|442776493|gb|ELR86775.1| protein translocase subunit secY/sec61 alpha [Synechocystis sp. PCC
7509]
Length = 437
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 170/344 (49%), Gaps = 39/344 (11%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---------DYLS 192
A E+F + + +R RLFVT +++++R+G F+P+PG +R Q +L
Sbjct: 9 TAQETFMQMAQTAGLRGRLFVTIGILILARLGVFLPIPGINREQFTQAVQNNNAIIGFLD 68
Query: 193 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 251
SG G L F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 69 IFSG--------GGLSTLGIFALGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRKI 120
Query: 252 KSYIWWISLGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTI 310
++S G+A+L+++ I A + P++I V+ TA L+ G+M + W + I
Sbjct: 121 SQITRYVSFGWAVLQSIFIAAIWVRPFAIVPGPA---FVVQTAIALIAGSMFIMWASELI 177
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
+E G G G+SL+I V I+ ++L + +Q G + +L L+ + TIV + V
Sbjct: 178 TERGVGNGASLLIFVNIVAALPKSLGDTVTFAQTGGRAAVGRVVVLLLVFLVTIVGI--V 235
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V E RK+ + ++ +E E Y+P + G+ P++ + +L P+ L
Sbjct: 236 FVQEASRKIPILSARRQVGRKVQE-----ERRSYLPLQLIQGGVMPIIFASSILILPAFL 290
Query: 429 ASILGSPFWQHVK-EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A+ G+ ++ L+P G+ PW Y +Y + F+ F
Sbjct: 291 ANATGNATISNIATNYLSPG---GSAPWAYALVYLVSIVFFSYF 331
>gi|152978161|ref|YP_001343790.1| preprotein translocase subunit SecY [Actinobacillus succinogenes
130Z]
gi|150839884|gb|ABR73855.1| preprotein translocase, SecY subunit [Actinobacillus succinogenes
130Z]
Length = 441
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 165/356 (46%), Gaps = 37/356 (10%)
Query: 125 SKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR 184
+K Y+NR S N E KS R LFV LIV RIG FIP+PG D
Sbjct: 2 AKKPGYQNR--------STQNGGNE--LKS---RLLFVLGALIVF-RIGSFIPVPGIDAA 47
Query: 185 LIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK 242
++ Q +D F GA + S F LGI P I ASI++Q+L + P+L +LRK
Sbjct: 48 VLSQLIEQQKGTIIDMFNMFSGGALSRASIFALGIMPYISASIIIQLLATVSPTLGELRK 107
Query: 243 EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGA 300
EG G KI Y + +LG A L+A+ ++ LP + + LV G
Sbjct: 108 EGESGRRKISKYTRYATLGLATLQAIGIST-GLPNMLPGLVPNLGFGFYFTAVVSLVTGT 166
Query: 301 MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLL-GV 359
M + W+ + I+E G G G SLII GI+ G + + + Q + P +L L+ V
Sbjct: 167 MFLMWLGEQITERGIGNGISLIIFAGIVAGLPSAIGQTIEQ--ARQGQMHPLVLLLIAAV 224
Query: 360 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTT 419
VT + V V G R++K++Y A + + ++P +N + + P + +
Sbjct: 225 VFAVTYFVVFVERGQRRIKVEY-----AKRQQGRQILGGHSTHLPLKVNMASVMPAIFAS 279
Query: 420 YLLAFPSILASILGS----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++ FP+ L S G + ++ +L P +P +Y +YA + F+ F
Sbjct: 280 SIILFPATLVSWFGESSSLEWLTNLSMMLQP-----GQP-IYLIVYAIAIMFFSFF 329
>gi|182412032|ref|YP_001817098.1| preprotein translocase subunit SecY [Opitutus terrae PB90-1]
gi|177839246|gb|ACB73498.1| preprotein translocase, SecY subunit [Opitutus terrae PB90-1]
Length = 500
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 29/339 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---DYLSFVSGSVDELGDF---GAEL 208
E+R R+F T L+ ++R+G IPLPG D + + D + GS+ L + GA
Sbjct: 13 ELRSRIFYTLALLFVARVGANIPLPGIDPGPLQKFFADQTASGGGSLVGLYNMFTGGALT 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE-A 267
K + LGI P I ASI+ Q++ +VP L +L++EG G +K+ Y + ++ I++ A
Sbjct: 73 KGAVCALGIMPYISASIIFQLMTAVVPMLSRLQQEGDVGRQKLTQYTRYATVAICIVQGA 132
Query: 268 VIVACYSLP-----------YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+++ P Y + ++ + + G + + W+ + I++ G G
Sbjct: 133 LLILALENPGRLFPGYDIGTYGSIVIVSKLSFLITSVVFMTAGTLVLMWLGEQITQRGIG 192
Query: 317 QGSSLIICVGILT---GYTETLYKMLSQLLGSSVRW-WPFMLGLLGVFTIVTMWAVVVTE 372
G SL+I VGIL G Y++ + +G+ P + ++ +F V M ++V +
Sbjct: 193 NGVSLLITVGILADIPGAAAQTYQLFFKPVGTGPNLGLPQAVIMIALFVAVVMGIIMVVQ 252
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
G RK+ +QY A + + ++P +N SG+ PV+ + +L FP + S L
Sbjct: 253 GQRKIPVQY-----AKRVVGNKVMGGQSSFLPLKVNYSGVMPVIFASAILLFPQQIFSQL 307
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G+ F ++K ++ ++ W YY IY + F+ F
Sbjct: 308 GAAF--NIKFLIEFSQNLLRGHWTYYAIYTTLILFFSYF 344
>gi|434404997|ref|YP_007147882.1| protein translocase subunit secY/sec61 alpha [Cylindrospermum
stagnale PCC 7417]
gi|428259252|gb|AFZ25202.1| protein translocase subunit secY/sec61 alpha [Cylindrospermum
stagnale PCC 7417]
Length = 437
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 173/340 (50%), Gaps = 33/340 (9%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
A E+F + + +R RL VT ++++ R+G F+P+PG +R + + +SG+ G
Sbjct: 10 AQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----ERFSEAISGNNSIFG 65
Query: 203 DF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 66 LLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++++G+AI+++V A +L +A + V TA L G+M + W + I+E G G
Sbjct: 126 YVTVGWAIVQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I V I+ ++L L Q+ G + +L L+ + TI+ + V V EG
Sbjct: 184 NGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIIGI--VFVQEGI 241
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 242 RRI-------PIISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFT 294
Query: 433 GSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + V L+P G+ PWVY +Y + F+ F
Sbjct: 295 KNPDLANIVNTYLSPS---GSAPWVYALVYLTSIVFFSYF 331
>gi|325288597|ref|YP_004264778.1| protein translocase subunit secY/sec61 alpha [Syntrophobotulus
glycolicus DSM 8271]
gi|324963998|gb|ADY54777.1| protein translocase subunit secY/sec61 alpha [Syntrophobotulus
glycolicus DSM 8271]
Length = 430
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 29/342 (8%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
++L +++ IR+++ T +++++ R+G IP+P DR + Q S G D
Sbjct: 2 ALLETLKDAWQVPTIRKKIAFTLLMLLVFRVGAHIPIPFMDRNTLQQMMGS--GGIFDFF 59
Query: 202 GDF-GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW-- 257
F G LK S F L I P I ASI++Q+L +VP L +L KEG DG +KI Y+ +
Sbjct: 60 NTFSGGSLKRFSVFSLSIMPYITASIIIQLLTVVVPYLERLSKEGEDGRKKIMQYVRYAT 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVCGAMTMSWICDTIS 311
+ LGF + + L + + A S + A +L G + W+ + I+
Sbjct: 120 VVLGF-------IQGFGLTFGLRGALISTSTALKVPLYFTVAIVLTAGTAFLMWLGEQIT 172
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G SLII GI+ G + + + S L V W +LG+L + IV V +
Sbjct: 173 EKGIGNGISLIIFAGIVAGIPDAIKHLYSLLSVGEVSWLA-ILGILLLCVIVIAGVVFIQ 231
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
EG R++ +QY A +IP +N +G+ P++ L+AFPS +A+
Sbjct: 232 EGQRRIPVQY-----AKRVVGRRVYGGQSTHIPLKVNQAGVMPIIFGVSLMAFPSTIATW 286
Query: 432 L--GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S F V + ++ S + P Y +YA + F F
Sbjct: 287 MPQTSGFAVFVHKYMSISGSFTSIP--YMILYAGLIIFFTYF 326
>gi|317968834|ref|ZP_07970224.1| preprotein translocase subunit SecY [Synechococcus sp. CB0205]
Length = 438
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 23/305 (7%)
Query: 175 FIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQV 229
+IP+PG DR Q + +F + LG G L F LGI P I ASI++Q+
Sbjct: 43 YIPVPGIDR----QAFQAFAAQGGSLLGFLDIFTGGGISALGVFALGILPFINASIIIQL 98
Query: 230 LCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKH 288
L +P L L+K EG G KI Y +++LG+ + ++++ A PY++ + +
Sbjct: 99 LTSALPQLEDLQKNEGEAGRRKIAQYTRYVALGWGLFQSIVFALILRPYAL-PGTPDLVF 157
Query: 289 VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVR 348
V+ TA LV G+M + W+ + I+E G GQG+SL+I + I+ L +
Sbjct: 158 VVQTAIALVTGSMVVMWLSEVITERGIGQGASLVIYLNIVATLPRALGSTIELAQTGGRE 217
Query: 349 WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFN 406
++ L+ VF I + V V EG R++ + SA R+ + I+ + Y+P
Sbjct: 218 AVGGIVVLVAVFLITIVGIVCVEEGSRRI-------PIVSAKRQVGGAGISARQSYLPLK 270
Query: 407 INPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVF 466
+N G+ P++ + ++ P +A+ +P V L+P +S PWVY ++ +
Sbjct: 271 LNAGGVMPIIFASAVVFLPLQIANFSKNPTLIQVASFLSPNSST---PWVYALLFFGLII 327
Query: 467 LFNIF 471
F+ F
Sbjct: 328 GFSFF 332
>gi|116266128|gb|ABJ91302.1| preprotein translocase subunit [Pyropia yezoensis]
Length = 411
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 162/329 (49%), Gaps = 36/329 (10%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L IVP+L +L+K EG G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + P Y + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGTISIWVKP---YVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYY 382
I++G + + +S GL + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQ---SFFDASYSNASLKFGLSIAIFLLMIIITICVQEGTRRIKI--- 226
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
+++ S I + Y+P +N G+ P++ + +A PS L I+ + +
Sbjct: 227 ---ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQILY 283
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ P S +Y +Y + F+ F
Sbjct: 284 LFCPNGS------LYLLLYCALILFFSYF 306
>gi|282898339|ref|ZP_06306330.1| SecY protein [Raphidiopsis brookii D9]
gi|281196870|gb|EFA71775.1| SecY protein [Raphidiopsis brookii D9]
Length = 437
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVDE 200
A E+F + + +R RL VT ++++ R+G F+P+PG DR Q + + G +D
Sbjct: 10 AQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRERFAQAISGNNAIFGLLDI 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++S
Sbjct: 70 FSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVS 128
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
LG+AIL++ A +L +A + V TA L G+M + W + I+E G G G+
Sbjct: 129 LGWAILQST--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGA 186
Query: 320 SLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
SL+I V I+ ++L L Q+ G + +L L+ V TI+ + V V EG R++
Sbjct: 187 SLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFVATIIGI--VFVQEGIRRI 244
Query: 378 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+ SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 245 -------PIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLIAN----- 292
Query: 436 FWQHVK--EILNPETS-VGARPWVYYTIYAFFVFLFNIF 471
F ++V+ I+N S G+ WVY +Y + F+ F
Sbjct: 293 FTKNVELANIVNTYLSPSGSSSWVYALVYMVSIIFFSYF 331
>gi|307244783|ref|ZP_07526884.1| preprotein translocase, SecY subunit [Peptostreptococcus stomatis
DSM 17678]
gi|306491881|gb|EFM63933.1| preprotein translocase, SecY subunit [Peptostreptococcus stomatis
DSM 17678]
Length = 422
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 152/325 (46%), Gaps = 24/325 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
+IR++L T +I++ R+G IP+PG + +I + + GA + F
Sbjct: 12 KDIRKKLLFTFFMIIVFRLGTTIPVPGINTSVIKNMVEKNSLLGLYNMFSGGAFSNFTIF 71
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
LGI P I ASI++Q+L SL +L+K G +G +KI Y +LG AI++AV
Sbjct: 72 ALGIGPYITASIIIQLLTAGFESLKELQKSGEEGKKKINKYTRMTTLGLAIIQAV----- 126
Query: 274 SLPYSIYAASHSVKH---VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
+ I ++ V + + LV +M + W+ D I+E G G GSS++I +GI++
Sbjct: 127 GITLGIVRSALKVNNPFFIFTVIITLVAASMMVMWLGDRITEKGLGNGSSVLIFIGIISR 186
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 386
+ ++Q + + WP + + V I + E RK+ +QY G K+
Sbjct: 187 LPIDI-GAIAQRVNIGLLKWPAITIFIVVVLITITGVTFINESTRKIPVQYAKRVVGRKM 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
E S +IP +N SG+ P++ + +LA P +A + GS V N
Sbjct: 246 YGG--ESS-------HIPMKVNQSGVMPIIFASSILALPQTIALLGGSKMQAAVNAFFNL 296
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
T G W Y I + LF+ F
Sbjct: 297 STDKGF--WTYRIIEIVLIVLFSYF 319
>gi|417908321|ref|ZP_12552079.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU037]
gi|341656198|gb|EGS79918.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU037]
Length = 337
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|415726182|ref|ZP_11470683.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Dmash]
gi|388064055|gb|EIK86623.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Dmash]
Length = 446
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 165/338 (48%), Gaps = 27/338 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSKENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEA--VIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ ++V S Y + ++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCGQVIPDGGFWSLVVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ GS+ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGSNGDWTKFSI-VGGVLLVILVFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LGS 434
+ +QY + S Y+P IN SG+ P + + +LA P+++A
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQFGDKSK 299
Query: 435 PFWQHVKEILNPETSVGARPW--VYYTIY-AFFVFLFN 469
P+ Q ++E L TS W +YT+ FF F +
Sbjct: 300 PWVQWIEENLANSTS----AWYIAFYTVMIVFFCFFYT 333
>gi|336430405|ref|ZP_08610352.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336018214|gb|EGN47966.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 437
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 156/305 (51%), Gaps = 13/305 (4%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F E+R+++F T ++V+ R+G +P+PG DR + + + + +
Sbjct: 1 MLTTLKNAFKMKELRKKIFYTFAMLVVIRLGSQLPVPGVDRTYFSRWFAAQTGDAFNFFD 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F G+ L +S F L I+P I +SI++Q+L +P L +++K+G DG +K+ + ++++
Sbjct: 61 AFTGGSFLNMSLFALNITPYITSSIIIQLLTIAIPKLEEMQKDGEDGRKKLTAITRYVTV 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
G A++E+ +A S S + +V+ L G+ + WI + I+E+G G G S
Sbjct: 121 GLALIESTAMAI-GFGRSGLLESFNALNVITVVAALTAGSAFLMWIGERITENGVGNGIS 179
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM--WAVVVTEGCRKVK 378
+++ + I++ + L + +Q + + L+ + IV M +++ + RK+
Sbjct: 180 IVLTINIVSRMPQDLAGLYNQFVKGKPVATAVLAALIILAVIVAMVILVIILNDATRKIP 239
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSP 435
+QY A + + IP +N +G+ PV+ + ++ FP I+ ++ G+
Sbjct: 240 VQY-----AKKVQGRKMVGGQSSNIPLKVNTAGVIPVIFASSIMQFPVIICQLIGYKGTG 294
Query: 436 FWQHV 440
W H+
Sbjct: 295 VWSHI 299
>gi|341820692|emb|CCC56991.1| preprotein translocase subunit SecY [Weissella thailandensis
fsh4-2]
Length = 435
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 31/343 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
L +VLN+ E +IR++L T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLLFTLWILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ W+
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRWL 116
Query: 259 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++G A ++++ I A ++ L + + + ++ F+L G M W+ + I+E G G
Sbjct: 117 TIGLAFVQSIGITAGFNQLSQVNLVKTPNTETYLLIGFILTAGTMLSVWLGEMITERGLG 176
Query: 317 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 373
QG S++I GI+ +Y++ + L G R W F++GL+ +F +V + +
Sbjct: 177 QGVSMLIFAGIIARLPAGIYQLFKEHILQGDDPARGWAFLVGLMIIFVVVIAFVTWFNQA 236
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
RKV +QY S + Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKVPMQY---------TRRSVGSGSSSYLPLRINIAGVIPVIFASSLLVTPQTILQAFA 287
Query: 434 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S F + V + L+ ET G +Y + LF F
Sbjct: 288 SKFADASWYNTVMQYLSIETMQGG------IVYTLLIVLFTFF 324
>gi|338211184|ref|YP_004655237.1| preprotein translocase subunit SecY [Runella slithyformis DSM
19594]
gi|336305003|gb|AEI48105.1| preprotein translocase, SecY subunit [Runella slithyformis DSM
19594]
Length = 437
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 164/326 (50%), Gaps = 32/326 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E++ R+ T +LI + R+GY+I LPG D + D SG + L F GA K S
Sbjct: 16 ELKNRILYTLLLIAVYRLGYYIVLPGVDSSKLNID----TSGLLGLLDTFLGGAFSKASI 71
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
F LGI P I ASI +Q+L +P +++KEG G +K+ +++ I +++
Sbjct: 72 FALGIMPYISASIAIQLLTMALPYFQKMQKEGESGRKKLNQITRVLTIFVTIAQSISYLQ 131
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
++ S + + + F+L G + W+ + I++ G G G+S++I +GI++ +
Sbjct: 132 TTISTDALLISRTA-FTISSVFILTAGTIFCMWLGERITDRGIGNGTSMLIMIGIVSRFP 190
Query: 333 ETLYK-MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLA 387
+Y+ +S+ G ++ F+L ++ +F +V M+AV +T+ R+V +QY G K+
Sbjct: 191 RAIYQEAVSRGTGEAL---IFVLEIVALF-LVVMFAVALTQAVRRVPIQYAKQVVGNKVM 246
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKEILN 445
R+ Y+P +N SG+ P++ L+ PS++A + S F V N
Sbjct: 247 GGQRQ---------YLPLKLNTSGVMPIIFAQALMFIPSLIAGLFAEKSDFASSVATTFN 297
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIF 471
T+ W Y ++A + +F F
Sbjct: 298 DYTT-----WQYNGLFATLIIVFTFF 318
>gi|428220882|ref|YP_007105052.1| protein translocase subunit SecY [Synechococcus sp. PCC 7502]
gi|427994222|gb|AFY72917.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp. PCC
7502]
Length = 434
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 43/344 (12%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + S +R RL VT ++++ R+G F+PLPG +R + + ++L
Sbjct: 10 SAQETFMQMAQASGLRGRLLVTIGMLILVRLGIFLPLPGINRAIFAEAVKNNSVVNFLDI 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
SG G L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG--------GGLSALGIFALGIIPYINASIIMQLMTTALPTLENLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
Y +++LG+A+L++ ++ + + + + + + T L G+M + W + ++E
Sbjct: 122 QYTRYVALGWALLQSFGISIW-VQGTGAVVNPGIGFSLETMVALTAGSMFVMWAGELVTE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I V I++G +L ++ S R +L LL +F ++ + V V E
Sbjct: 181 RGVGNGASLLIFVSIVSGLPRSLGSTIALAQADSSRVGGVLL-LLSIFLVMIVCIVFVQE 239
Query: 373 GCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
G R++ + + G KL RE S Y+P +N G+ P++ + +L PS +
Sbjct: 240 GTRRIPIISARRQVGRKL---YREQS------SYLPLKLNQGGVMPIIFASSVLILPSFI 290
Query: 429 ASILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S V L P T W Y Y + F+ F
Sbjct: 291 GQTFASNQIVASVTSFLAPNT------WGYVLFYLVLILGFSYF 328
>gi|404416705|ref|ZP_10998520.1| preprotein translocase subunit SecY [Staphylococcus arlettae
CVD059]
gi|403490909|gb|EJY96439.1| preprotein translocase subunit SecY [Staphylococcus arlettae
CVD059]
Length = 430
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 29/332 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
SFFK+ E+R ++F T ++VI +IG +IP PG + S G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSQQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ ++ + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEAGRKKLNNFTRYFAIILAFV 124
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMS-----WICDTISESGFGQGSS 320
+++ +A ++ Y + +T++LL+ +T W+ + I++ G G G S
Sbjct: 125 QSIGMA---FQFNNYLKGQLIMDQSITSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGIS 181
Query: 321 LIICVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
+II GIL+ +L + Q +G W ++GLL ++T+ A+ V + RK+
Sbjct: 182 IIIFAGILSTLPSSLIQFYQQAFVGQDDVTMAWLKVIGLLVGMVLLTVGAIFVLQAVRKI 241
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
+QY K +A R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDADW 295
Query: 438 -QHVKEILNPETSVGARPWVYYTI-----YAF 463
Q V ++ NP ++G +V I YAF
Sbjct: 296 AQKVSDVANPSNNIGMIVYVVLIIAFTYFYAF 327
>gi|415721825|ref|ZP_11468758.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Bmash]
gi|415725169|ref|ZP_11470172.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703C2mash]
gi|388060530|gb|EIK83222.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Bmash]
gi|388061974|gb|EIK84610.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703C2mash]
Length = 446
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 18/294 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFKTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCGQVIPDGSMWSLIVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G + W F + + GVF ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGLNGDWTKFSI-VAGVFLVILIFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ +QY + S Y+P +N SG+ P + + +LA P++LA
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ 293
>gi|90020626|ref|YP_526453.1| protein translocase subunit secY/sec61 alpha [Saccharophagus
degradans 2-40]
gi|89950226|gb|ABD80241.1| protein translocase subunit secY/sec61 alpha [Saccharophagus
degradans 2-40]
Length = 447
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 18/323 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E+ RL + I I R+G IP+PG D I Q + + L F GA ++S
Sbjct: 16 GELWARLKFLLLAIFIYRLGTHIPVPGIDPEQIAQMFNRNQGTFLGMLNMFSGGAWERMS 75
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-VIV 270
LGI P I ASI+MQ++ + PSL L+KEG G KI Y ++++ A+++A V+V
Sbjct: 76 ILALGIMPYISASIIMQMMAAVTPSLEALKKEGESGRRKISQYTRYLTVALALIQAFVMV 135
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A + YA + ++ LV GA+ M W+ + ++E G G G S++I GI+ G
Sbjct: 136 AGLAGQGMAYAGLAPLSFYVIAVTSLVTGAVFMMWLGEQVTERGIGNGISMLIFAGIVAG 195
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLASA 389
+ + + P L +G+ + +W VV E G R++ +QY
Sbjct: 196 LPGAVGQAFESARQGDLH--PIALLAIGLAAVAIVWFVVRMERGQRRITIQY-------- 245
Query: 390 AREDS---PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
AR S + ++P IN +G+ PV+ + +L FP+ +A G+ IL
Sbjct: 246 ARRQSGRQAYSAQTSHLPLKINMAGVIPVIFASSILLFPASIAQWFGNASEGKTAVILQE 305
Query: 447 -ETSVGARPWVYYTIYAFFVFLF 468
++G W+ + ++ + LF
Sbjct: 306 IALALGPGQWLNFVVFGALIILF 328
>gi|239636213|ref|ZP_04677217.1| preprotein translocase, SecY subunit [Staphylococcus warneri
L37603]
gi|239598229|gb|EEQ80722.1| preprotein translocase, SecY subunit [Staphylococcus warneri
L37603]
Length = 431
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 26/330 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
SFFK+ E+R ++F T ++VI +IG +IP PG + Q G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPNAFDQAAKG-SQGVTDLLNTFGGGA 65
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 66 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDVGRRKINNVTRYFAIILAFI 125
Query: 266 EAVIVACYSLPYS-IYAA----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+++ S ++ +Y SHSV ++ A L G + W+ D I++ G G G S
Sbjct: 126 QSI---GMSFQFNNLYGGRLIVSHSVYSYLLIALTLTAGTAFLIWLGDQITQFGVGNGIS 182
Query: 321 LIICVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
LII GIL+ ++ + Q +S+ W ++ L+ ++T+ A+ V E RK
Sbjct: 183 LIIFAGILSTLPSSIIQAGQQAFVGQEDTSLAWLK-IVALIVALVLLTIGAIFVLEAKRK 241
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 242 IPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAE 295
Query: 437 W-QHVKEILNPETSVGARPWVYYTI-YAFF 464
W Q + + NP +++G ++ I +A+F
Sbjct: 296 WAQQIADTANPSSNIGMVIYIVLIIAFAYF 325
>gi|379707079|ref|YP_005262284.1| preprotein translocase subunit SecY [Nocardia cyriacigeorgica
GUH-2]
gi|374844578|emb|CCF61640.1| preprotein translocase subunit SecY [Nocardia cyriacigeorgica
GUH-2]
Length = 440
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 38/342 (11%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-------ELG 202
+F ++RR++ T L+ + R G +P PG D R + Q+ + VSG + L
Sbjct: 8 AFRTPDLRRKILFTLGLVALYRAGAALPSPGVDYRAV-QECVDLVSGGENAGIYQLINLF 66
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 67 SGGALLQLSVFAIGIMPYITASIIIQLLTVVIPRFEELRKEGQAGQTKMTQYTRYLSIAL 126
Query: 263 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L+A + + + A S+ +++ ++ GA + W + I+E G
Sbjct: 127 AVLQATGLVALAARGQLLQGCQQDILADTSIFGMIIIVLVMTAGAALVMWFGEQITERGI 186
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGC 374
G G SL+I GI +L G + GL+ V + AV+ V +G
Sbjct: 187 GNGMSLLIFAGIAARIPVEGKAILDSRGG-------LVFGLVCVAAFAIIVAVIFVEQGQ 239
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + LL P+++A + GS
Sbjct: 240 RRIPVQYAKRVVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTGS 294
Query: 435 ------PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + K ++NP V +Y+ + FF + +
Sbjct: 295 QNNPDPSWWQELIQKYLVNPSNPV--YIAIYFGMIVFFTYFY 334
>gi|254487369|ref|ZP_05100574.1| preprotein translocase, SecY subunit [Roseobacter sp. GAI101]
gi|214044238|gb|EEB84876.1| preprotein translocase, SecY subunit [Roseobacter sp. GAI101]
Length = 473
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R R+ T L+++ R+G FIP+PG D + Q S G + F GA ++
Sbjct: 40 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGTALRQFMESAGQGIGGMVSMFTGGALGRMG 99
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L+A +A
Sbjct: 100 IFALGIMPYISASIIVQLMTSMVPALEQLKKEGEQGRKKINQYTRFGTVALATLQAYGLA 159
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL AA + M LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 160 V-SLEAGDIAADPGMYFRMACMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 218
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ + S G S P ++G+L + + M+ V + RK+ +QY ++
Sbjct: 219 PAAIAQFFSS--GRSGAISPAVIVGVLVMVIVTIMFVVFMERALRKIHIQYPRRQVGQKM 276
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G+
Sbjct: 277 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGN 315
>gi|311115147|ref|YP_003986368.1| preprotein translocase subunit SecY [Gardnerella vaginalis ATCC
14019]
gi|415705924|ref|ZP_11461063.1| preprotein translocase subunit SecY [Gardnerella vaginalis 0288E]
gi|417557048|ref|ZP_12208100.1| preprotein translocase, SecY subunit [Gardnerella vaginalis 315-A]
gi|310946641|gb|ADP39345.1| preprotein translocase subunit SecY [Gardnerella vaginalis ATCC
14019]
gi|333601689|gb|EGL13129.1| preprotein translocase, SecY subunit [Gardnerella vaginalis 315-A]
gi|388055349|gb|EIK78262.1| preprotein translocase subunit SecY [Gardnerella vaginalis 0288E]
Length = 446
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 18/294 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ +QY + S Y+P +N SG+ P + + +LA P++LA
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ 293
>gi|385801224|ref|YP_005837627.1| preprotein translocase subunit SecY [Gardnerella vaginalis HMP9231]
gi|415703900|ref|ZP_11459651.1| preprotein translocase subunit SecY [Gardnerella vaginalis 284V]
gi|333393952|gb|AEF31870.1| preprotein translocase, SecY subunit [Gardnerella vaginalis
HMP9231]
gi|388051206|gb|EIK74231.1| preprotein translocase subunit SecY [Gardnerella vaginalis 284V]
Length = 446
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 18/294 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ +QY + S Y+P +N SG+ P + + +LA P++LA
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ 293
>gi|415712858|ref|ZP_11465016.1| preprotein translocase subunit SecY [Gardnerella vaginalis 55152]
gi|388056755|gb|EIK79614.1| preprotein translocase subunit SecY [Gardnerella vaginalis 55152]
Length = 446
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 18/294 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ +QY + S Y+P +N SG+ P + + +LA P++LA
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ 293
>gi|359410090|ref|ZP_09202555.1| preprotein translocase, SecY subunit [Clostridium sp. DL-VIII]
gi|357168974|gb|EHI97148.1| preprotein translocase, SecY subunit [Clostridium sp. DL-VIII]
Length = 428
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 170/337 (50%), Gaps = 21/337 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F E+R+++ T +L+ R+G IPLPG I DYL +S S LG
Sbjct: 1 MLQTLRNAFKVPELRKKILWTILLVAAFRLGSHIPLPG-----INSDYLKNLSNSGGLLG 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S LG+ P I ASI+MQ+L +P + QL+KEG G +KI+S +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIMQLLTVAIPQMEQLQKEGDTGRKKIQSATRY 115
Query: 258 ISLGFA-ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+SLG + IL I+A S + + K ++V F LV G W+ D I+ G G
Sbjct: 116 VSLGISFILAYGILATISSSGATNGINLMQKLIIV--FALVVGTTFCMWLGDQITVKGIG 173
Query: 317 QGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G+S++I + I++ T+ M++ Q GS+ + G V + T+ ++E R
Sbjct: 174 NGTSILIFINIISRVPMTIGSMMTMQEAGSASIVEIILFGAFIVLLLGTILYFSLSE--R 231
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+V +QY G K +S + + +IP +I S + ++ + ++ FP +A++ G
Sbjct: 232 RVTVQYAG-KFSSG--NSNMVKSQSTHIPLSIIGSAVLAIIFSMSVMDFPRTIATLFGGD 288
Query: 436 FWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF 471
+ K IL TS+ ++ W+Y +YA FN F
Sbjct: 289 -KEWAKWILTNNTSIFNSKSWMYLVLYAVLTIFFNWF 324
>gi|415704840|ref|ZP_11460111.1| preprotein translocase subunit SecY [Gardnerella vaginalis 75712]
gi|388051562|gb|EIK74586.1| preprotein translocase subunit SecY [Gardnerella vaginalis 75712]
Length = 446
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 18/294 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ +QY + S Y+P +N SG+ P + + +LA P++LA
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ 293
>gi|242243967|ref|ZP_04798410.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
W23144]
gi|416125862|ref|ZP_11596209.1| preprotein translocase subunit secY [Staphylococcus epidermidis
FRI909]
gi|418631112|ref|ZP_13193582.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU128]
gi|420175801|ref|ZP_14682231.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM061]
gi|420176622|ref|ZP_14683030.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM057]
gi|420181224|ref|ZP_14687428.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM053]
gi|420191488|ref|ZP_14697404.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM023]
gi|420199195|ref|ZP_14704875.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM031]
gi|242232600|gb|EES34912.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
W23144]
gi|319400605|gb|EFV88830.1| preprotein translocase subunit secY [Staphylococcus epidermidis
FRI909]
gi|374835880|gb|EHR99476.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU128]
gi|394242488|gb|EJD87879.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM061]
gi|394246924|gb|EJD92175.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM053]
gi|394252465|gb|EJD97499.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM057]
gi|394266521|gb|EJE11153.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM023]
gi|394272351|gb|EJE16813.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM031]
Length = 430
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEQSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|283782774|ref|YP_003373528.1| preprotein translocase subunit SecY [Gardnerella vaginalis 409-05]
gi|415709554|ref|ZP_11463179.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6420B]
gi|283441921|gb|ADB14387.1| preprotein translocase, SecY subunit [Gardnerella vaginalis 409-05]
gi|388056226|gb|EIK79102.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6420B]
Length = 447
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 165/335 (49%), Gaps = 22/335 (6%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D +++ + S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVVHACTVKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIVACYSLPYSIYA--------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
IL++ + + +++ S+ ++V ++ G + W+ + I++ G
Sbjct: 126 ILQSTTILVTARTGALFNYQCGNNIIPDGSMWSLIVMVLIMTGGTGLIMWMAELITDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GQG S++I + I +G+ L+++ GS+ W F + + GV ++ ++ V R
Sbjct: 186 GQGMSVLIFMSICSGFLPKLWEIGWGTNGSNGDWNKFAI-VGGVLIVILIFVDFVELAQR 244
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-S 434
++ +QY + S Y+P +N SG+ P + + +LA P+++A S
Sbjct: 245 RIPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAVPTLIAQFGDKS 299
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIY-AFFVFLF 468
W + E N S A +YT+ FF F +
Sbjct: 300 KAWVNWIE-ANLANSTSAWYIAFYTVMIVFFCFFY 333
>gi|72382949|ref|YP_292304.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
NATL2A]
gi|72002799|gb|AAZ58601.1| protein translocase subunit secY/sec61 alpha [Prochlorococcus
marinus str. NATL2A]
Length = 439
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 18/327 (5%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 205
F E+R R+F T L++I R+G +IP+PG DR + + +F+ +G G
Sbjct: 19 FSNEELRGRVFTTLGLLLIVRLGIYIPMPGIDR----EAFKTFIDQGGQLIGFLDIFTGG 74
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 264
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ +
Sbjct: 75 GISTLGVFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGL 134
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+++ + A Y++ S + + V+ T+ LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 135 VQSTVFALILRQYAVEGISET-EFVIQTSLALVTGSMIVMWLSEIITEKGIGQGASLVIF 193
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
+ I+ + L + + ++ LL VF I + + V EG R++ +
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRADVLGIIILLIVFLITIVGIIFVQEGARRIPIVSAKS 253
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
++ A S + Y+P +N G+ P++ + L+ P +A+ +P L
Sbjct: 254 QMGGGALLPSR----QSYLPLKLNAGGVMPIIFASALIFLPITIANFTQNPLLIKAASSL 309
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
NP +S PW Y + + F F
Sbjct: 310 NPGSS---NPWPYAITFFALILGFAYF 333
>gi|417644063|ref|ZP_12294082.1| preprotein translocase, SecY subunit [Staphylococcus warneri
VCU121]
gi|445059046|ref|YP_007384450.1| preprotein translocase subunit SecY [Staphylococcus warneri SG1]
gi|330685127|gb|EGG96791.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU121]
gi|443425103|gb|AGC90006.1| preprotein translocase subunit SecY [Staphylococcus warneri SG1]
Length = 431
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 26/330 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
SFFK+ E+R ++F T ++VI +IG +IP PG + Q G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPNAFDQAAKG-SQGVTDLLNTFGGGA 65
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 66 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDVGRRKINNVTRYFAIILAFI 125
Query: 266 EAVIVACYSLPYS-IYAA----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+++ S ++ +Y SHSV ++ A L G + W+ D I++ G G G S
Sbjct: 126 QSI---GMSFQFNNLYGGRLIVSHSVYSYLLIALTLTAGTAFLIWLGDQITQFGVGNGIS 182
Query: 321 LIICVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
LII GIL+ ++ + Q +S+ W ++ L+ ++T+ A+ V E RK
Sbjct: 183 LIIFAGILSTLPSSIIQAGQQAFVGQEDTSLAWLK-IVALIVALVLLTVGAIFVLEAKRK 241
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 242 IPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAE 295
Query: 437 W-QHVKEILNPETSVGARPWVYYTI-YAFF 464
W Q + + NP +++G ++ I +A+F
Sbjct: 296 WAQQIADTANPSSNIGMVIYIVLIIAFAYF 325
>gi|255081925|ref|XP_002508181.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226523457|gb|ACO69439.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 423
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 148/293 (50%), Gaps = 21/293 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDELGDFGA 206
F S++ ++ +L+++SR+G +IP+ G DR + V G VD L G+
Sbjct: 2 NDFMNSKLPGKIGTVLLLLILSRVGTYIPISGVDRDAFAESLQGGGNVLGYVDTLTG-GS 60
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAIL 265
KL F LGI P I +SI+ Q+L + PSL +L+K EG G K + Y + +LGFA++
Sbjct: 61 ISKLGIFSLGIVPYINSSIIFQLLTSVFPSLKKLQKEEGEAGRRKFQQYQRYGALGFAVV 120
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+AV Y P + ++ ++ ++ +L GAM + +I + ++E G G+SL+I
Sbjct: 121 QAVGQCLYVRP---FVEDFNLGWLVESSAVLTAGAMILLYIGEVLTELKLGNGTSLLIFT 177
Query: 326 GILTGYTETLYKMLSQL--LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
I++ + + LSQ G + P G F + T+ V V E RK+ + Y
Sbjct: 178 NIISSLPSSFGQTLSQASEKGDAATVLPV---FFGAFFLTTLGIVYVQEAERKIPMNYST 234
Query: 384 -FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
F+ A+ Y+PF +N +G+ P++ + LLA P+ LA +P
Sbjct: 235 RFQAGGLAKSS--------YLPFKVNSAGVMPIIFASSLLALPATLARFAPNP 279
>gi|340028932|ref|ZP_08664995.1| preprotein translocase subunit SecY [Paracoccus sp. TRP]
Length = 454
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 13/285 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+E+R+R++ T L++I R+G +IP+PG D R + Q G + + GA +
Sbjct: 21 TELRQRIWFTLGLLIIYRLGTYIPVPGIDGAALRNFMDQAQAGL--GGILSMFTGGALGR 78
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A+ +A
Sbjct: 79 MGIFALGIMPYISASIIVQLLASMVPALEQLKKEGEQGRKKINQYTRYGTVALALFQAWG 138
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+A SL + A + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLEHGNLAHEPGMFFRASVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVA 197
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
L + L+Q ++ P +LG++ + V + V + RK+ +QY ++
Sbjct: 198 EIPAHLAQFLAQGRSGAIS-TPVILGVIVMVAAVIAFVVFMERALRKIHIQYPRRQVGMK 256
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G+
Sbjct: 257 IYDGQ-----SSHLPIKVNPAGVIPAIFASSLLLLPVTISTFSGN 296
>gi|158337828|ref|YP_001519004.1| preprotein translocase subunit SecY [Acaryochloris marina
MBIC11017]
gi|359457962|ref|ZP_09246525.1| preprotein translocase subunit SecY [Acaryochloris sp. CCMEE 5410]
gi|158308069|gb|ABW29686.1| preprotein translocase, SecY subunit [Acaryochloris marina
MBIC11017]
Length = 435
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 165/341 (48%), Gaps = 36/341 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + + +R R+F+T L+++ R+G +P+PG +R +L F
Sbjct: 10 SAQETFMQMAQAAGLRGRVFITLGLLILVRLGIRLPVPGINRAAFTSTFAGNPVFGFLDF 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
SG G F A L F LGI P I ASI++Q+L +PSL +L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGIIPFINASIILQLLTAALPSLERLQKDEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++LG+AI+++ A + + ++ L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAIIQSTGFAILINSAEGVVFNPGIVFIVQMVVALTAGSMFVMWVGELITE 181
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I + I++G TL L V ++ L+ VF ++ + V V E
Sbjct: 182 RGVGNGASLLIFLSIVSGLPSTLGNALQIAEQGEVSK---VIILISVFILMIVGIVFVQE 238
Query: 373 GCRKVKLQYYGFKLASAAREDSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + Y A R+ T E + Y+P +N G+ P++ + +L P LA
Sbjct: 239 GTRRIPIVY-------ARRQVGRRTYQEQKSYLPLRLNSGGVMPIIFASAMLILPGTLAG 291
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + L+P +S+ PWVY Y + F+ F
Sbjct: 292 LTNNATIIEFAGYLSPNSSL---PWVYVIFYLSMIVFFSYF 329
>gi|452943498|ref|YP_007499663.1| protein translocase subunit secY/sec61 alpha [Hydrogenobaculum sp.
HO]
gi|452881916|gb|AGG14620.1| protein translocase subunit secY/sec61 alpha [Hydrogenobaculum sp.
HO]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 157/313 (50%), Gaps = 17/313 (5%)
Query: 144 LNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+NN + + E +R+R+ T ++ I R+G IP+PG D + D++S + GS+ L
Sbjct: 1 MNNFLKEILELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVAL-SDFMSNLKGSLFSLY 59
Query: 203 DF--GAEL-KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWI 258
D G L +++ F LG+ P I ASI+MQ+L +P L +L KE D G +KI Y +I
Sbjct: 60 DIFSGGNLSRMTLFALGVMPYISASIVMQLLSSAIPELQRLAKEEGDYGRQKINEYTKYI 119
Query: 259 SLGFAILEAVIVACY----SLPYSIYAASHSVKHVMVTAFL-LVCGAMTMSWICDTISES 313
++ A +++ +A + + P+ H +V A L +V M + W+ D I+E
Sbjct: 120 TVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVLAVLGIVASTMILVWLGDMITEK 179
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S++I GI+ + E + +S L + + F +G + + V V+ E
Sbjct: 180 GIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAF-VGAILIVIAVIAAIVIFQEA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY R++ Y+P +NP+G+ P++ LL PS + +
Sbjct: 239 ERRIPIQY---PRRQVGRQE--FVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIK 293
Query: 434 SPFWQHVKEILNP 446
+P Q + + NP
Sbjct: 294 NPIAQSIHDAFNP 306
>gi|417656438|ref|ZP_12306123.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU028]
gi|418664348|ref|ZP_13225831.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU081]
gi|329736444|gb|EGG72712.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU028]
gi|374410646|gb|EHQ81389.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU081]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 25/328 (7%)
Query: 151 FFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG-- 205
FF S E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG
Sbjct: 8 FFTSKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGG 63
Query: 206 AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
A + S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A
Sbjct: 64 ALKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAF 123
Query: 265 LEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
++++ +A Y SV ++ A +L G + W+ D I++ G G G SLI
Sbjct: 124 IQSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
I GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+
Sbjct: 184 IFAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIP 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW- 437
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 243 IQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWA 296
Query: 438 QHVKEILNPETSVGARPWVYYTI-YAFF 464
Q++ + NP +++G +V I +A+F
Sbjct: 297 QNIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|418614966|ref|ZP_13177922.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU118]
gi|418634539|ref|ZP_13196933.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU129]
gi|420191171|ref|ZP_14697106.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM037]
gi|420205068|ref|ZP_14710603.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM015]
gi|374818721|gb|EHR82868.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU118]
gi|374837069|gb|EHS00642.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU129]
gi|394257980|gb|EJE02879.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM037]
gi|394271148|gb|EJE15646.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM015]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEQSVMGYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|254449308|ref|ZP_05062753.1| preprotein translocase, SecY subunit [gamma proteobacterium
HTCC5015]
gi|198261067|gb|EDY85367.1| preprotein translocase, SecY subunit [gamma proteobacterium
HTCC5015]
Length = 449
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 14/303 (4%)
Query: 139 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 198
R +N A +E+R R+ ++I R+G +I +PG + R++ D SG +
Sbjct: 3 RPGGQMNPTANLGQLTEVRNRILFLLFALLIYRVGTYITVPGINPRVM-ADLFESQSGGI 61
Query: 199 DELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+ D GA ++S F LG+ P I ASI++Q++ H+ P V+LRKEG G K+ Y
Sbjct: 62 LGMVDVFAGGALGRMSLFALGVMPYITASIIIQMMGHVHPPFVELRKEGQQGQRKLTQYT 121
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTIS 311
++++ A +++V ++ + S + V LV G M + W+ + I+
Sbjct: 122 RYLTVLLATVQSVGISVALQNPEVAGPSLVTNPGISFVFTATITLVTGTMFLMWLGEQIT 181
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G S++I GI+ G + + +L +P +LG+L V +VT + +V+
Sbjct: 182 ERGIGNGISMLIFAGIVAGLPTAIANVF-ELTSEGQMSYPLLLGVLVVAALVTYFVIVME 240
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
G R++ + + K R+ + + ++P +N +G+ P + ++ FP +AS
Sbjct: 241 RGQRRITINFA--KRQQGRRQYAAHSS---HLPLKLNAAGVIPAIFAQAIILFPGTIASF 295
Query: 432 LGS 434
G+
Sbjct: 296 AGN 298
>gi|126697069|ref|YP_001091955.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9301]
gi|126544112|gb|ABO18354.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9301]
Length = 439
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 173/355 (48%), Gaps = 40/355 (11%)
Query: 134 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 193
F+N R S ++ F E+R R+ T L+++ R+G +IP+PG DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSF 57
Query: 194 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 247
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAG 117
Query: 248 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 307
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILKQYAIQGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 359
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 360 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 416
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGTSTLLPTRQSYLPLKLNAGGVMPII 281
Query: 417 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+ P +A++ G+P + LNP +S PW Y + + F+ F
Sbjct: 282 FASALIFLPITIANVTGNPVLIKLASSLNPGSS---NPWPYALTFFSLILGFSYF 333
>gi|357589453|ref|ZP_09128119.1| preprotein translocase subunit SecY [Corynebacterium nuruki S6-4]
Length = 444
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 166/344 (48%), Gaps = 39/344 (11%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGD 203
+F +++R+++ T +I++ RIG IP PG D I + S S+ +
Sbjct: 7 AFRDADLRKKILFTIAMIILFRIGSQIPTPGVDYEEITEQVRSLTEDGQTSMYSLINMFS 66
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 67 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEQLKKEGQSGQAKMTEYTRYLTVALA 126
Query: 264 ILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + + + + V H +++ ++ GA+ + W+ + I++ G G
Sbjct: 127 LLQSAGIVALADRKQLLGSGVRVLHEDTGVFGLVMMVVIMTAGAVLVMWMGELITDRGVG 186
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVVTEGCR 375
G SL+I GI T ++ SQ + F+ G++ I+ + + + +G R
Sbjct: 187 NGMSLLIFAGIAT-------QLPSQGMNILRNSGGFVFAGVIVALLILVVGVIFIEQGQR 239
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+V +QY K R+ E Y+P +N +G+ PV+ + +L P ++ I+ S
Sbjct: 240 RVPVQYA--KRMVGRRQYG---ETSTYLPLKVNQAGVIPVIFASSMLTVPILVTQIIQSG 294
Query: 436 -------FW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+W ++V IL + W+Y I+A + F+ F
Sbjct: 295 DSAQNDNWWNRNVMRILTDPSD-----WIYIVIFALLIIFFSFF 333
>gi|157414144|ref|YP_001485010.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9215]
gi|254525969|ref|ZP_05138021.1| preprotein translocase, SecY subunit [Prochlorococcus marinus str.
MIT 9202]
gi|157388719|gb|ABV51424.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9215]
gi|221537393|gb|EEE39846.1| preprotein translocase, SecY subunit [Prochlorococcus marinus str.
MIT 9202]
Length = 439
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 173/355 (48%), Gaps = 40/355 (11%)
Query: 134 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 193
F+N R S ++ F E+R R+ T L+++ R+G +IP+PG DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSF 57
Query: 194 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 247
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAG 117
Query: 248 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 307
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILRQYAIQGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 359
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 360 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 416
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGNSTLLPTRQSYLPLKLNAGGVMPII 281
Query: 417 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+ P +A++ G+P + LNP +S PW Y + + F+ F
Sbjct: 282 FASALIFLPITIANVTGNPILIKLASSLNPGSS---NPWPYALTFFSLILGFSYF 333
>gi|54022761|ref|YP_117003.1| preprotein translocase subunit SecY [Nocardia farcinica IFM 10152]
gi|54014269|dbj|BAD55639.1| putative preprotein translocase subunit [Nocardia farcinica IFM
10152]
Length = 440
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 36/341 (10%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-------ELG 202
+F ++RR++ T L+ + R G +P PG D + + Q+ + VSG + L
Sbjct: 8 AFRTPDLRRKILFTLGLVALYRAGASLPSPGVDYKAV-QECVDLVSGGENAGIYQLINLF 66
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 67 SGGALLQLSVFAIGIMPYITASIIIQLLTVVIPRFEELRKEGQSGQTKMTQYTRYLSIAL 126
Query: 263 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
AIL+A + + + A S+ +++ ++ GA + W + I+E G
Sbjct: 127 AILQATGLVALAARGQLLQGCQQDILADTSIFGMIIIVLVMTAGAALVMWFGEQITERGV 186
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G SL+I GI T K + G V F L + F I+ + + V +G R
Sbjct: 187 GNGMSLLIFAGI-AARIPTEGKAILDSRGGMV----FALVCVAAFLII-VAVIFVEQGQR 240
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
++ +QY + S Y+P +N +G+ PV+ + LL P+++A + GS
Sbjct: 241 RIPVQYAKRVVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTGSQ 295
Query: 435 -----PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + K ++NP + +Y+ + FF + +
Sbjct: 296 TATDPSWWQEIIQKYLVNPSNPI--YIAIYFGLIVFFTYFY 334
>gi|393763747|ref|ZP_10352362.1| preprotein translocase subunit SecY [Alishewanella agri BL06]
gi|392605363|gb|EIW88259.1| preprotein translocase subunit SecY [Alishewanella agri BL06]
Length = 442
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 28/339 (8%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
+ AA+ F SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ +
Sbjct: 8 SRAAKGGF-SELKSRLLFVLLAIIVFRLGSFVPIPGIDATVLAQLFEQ-QRGTIVEMFNM 65
Query: 205 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA + S F LGI P I ASI++Q+L + P++ +L+KEG G KI Y + +L
Sbjct: 66 FSGGALERASVFALGIMPYISASIIVQLLTVMHPAMAELKKEGEAGKRKINQYTRYGTLA 125
Query: 262 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
AIL+++ +A LP + + LV G M + W+ + I+E G G G
Sbjct: 126 LAILQSIGIAT-GLPNMMPGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGI 184
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 378
SL+I GI+ G+ + + + Q + + +L +GV I W VV E G R++
Sbjct: 185 SLLIFTGIVAGFPSAIGQTIEQARQGDLHF--LLLVAIGVIVIAITWFVVFFERGQRRIV 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--- 435
+ Y A + ++P +N +G+ P + + ++ FP +AS GS
Sbjct: 243 VNY-----AKRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGM 297
Query: 436 ---FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
F Q + L+P +P +Y +Y+ + F F
Sbjct: 298 LANFLQELSLTLSP-----GQP-LYMMLYSAAIIFFCFF 330
>gi|27468721|ref|NP_765358.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
ATCC 12228]
gi|57867681|ref|YP_189374.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
RP62A]
gi|251812067|ref|ZP_04826540.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875362|ref|ZP_06284235.1| accessory Sec system translocase SecY2 [Staphylococcus epidermidis
SK135]
gi|293368453|ref|ZP_06615077.1| type I general secretory pathway preprotein translocase SecY
[Staphylococcus epidermidis M23864:W2(grey)]
gi|417658761|ref|ZP_12308381.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU045]
gi|417912363|ref|ZP_12556057.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU105]
gi|417913241|ref|ZP_12556910.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU109]
gi|418326223|ref|ZP_12937414.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU071]
gi|418413200|ref|ZP_12986443.1| preprotein translocase subunit secY [Staphylococcus epidermidis
BVS058A4]
gi|418605544|ref|ZP_13168862.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU041]
gi|418610814|ref|ZP_13173921.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU065]
gi|418612889|ref|ZP_13175912.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU117]
gi|418617806|ref|ZP_13180695.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU120]
gi|418621728|ref|ZP_13184494.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU123]
gi|418623808|ref|ZP_13186507.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU125]
gi|418627185|ref|ZP_13189765.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU126]
gi|418628260|ref|ZP_13190814.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU127]
gi|419768288|ref|ZP_14294415.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771544|ref|ZP_14297596.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|420164307|ref|ZP_14671038.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM095]
gi|420166444|ref|ZP_14673129.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM088]
gi|420169126|ref|ZP_14675730.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM087]
gi|420170714|ref|ZP_14677273.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM070]
gi|420173547|ref|ZP_14680039.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM067]
gi|420183524|ref|ZP_14689652.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM049]
gi|420185865|ref|ZP_14691942.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM040]
gi|420188219|ref|ZP_14694230.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM039]
gi|420195290|ref|ZP_14701084.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM021]
gi|420198136|ref|ZP_14703853.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM020]
gi|420203057|ref|ZP_14708642.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM018]
gi|420207126|ref|ZP_14712618.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM008]
gi|420209952|ref|ZP_14715385.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM003]
gi|420212707|ref|ZP_14718054.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM001]
gi|420214701|ref|ZP_14719977.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05005]
gi|420217020|ref|ZP_14722207.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05001]
gi|420221061|ref|ZP_14726015.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04008]
gi|420223450|ref|ZP_14728347.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH08001]
gi|420223898|ref|ZP_14728760.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH06004]
gi|420228375|ref|ZP_14733127.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05003]
gi|420229966|ref|ZP_14734666.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04003]
gi|420232417|ref|ZP_14737055.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051668]
gi|420235070|ref|ZP_14739622.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051475]
gi|421607944|ref|ZP_16049176.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
AU12-03]
gi|68723610|sp|Q8CNF3.1|SECY_STAES RecName: Full=Protein translocase subunit SecY
gi|81673636|sp|Q5HM19.1|SECY_STAEQ RecName: Full=Protein translocase subunit SecY
gi|27316269|gb|AAO05444.1|AE016750_49 preprotein translocase SecY subunit [Staphylococcus epidermidis
ATCC 12228]
gi|57638339|gb|AAW55127.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
RP62A]
gi|251804401|gb|EES57058.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296127|gb|EFA88648.1| accessory Sec system translocase SecY2 [Staphylococcus epidermidis
SK135]
gi|291317411|gb|EFE57833.1| type I general secretory pathway preprotein translocase SecY
[Staphylococcus epidermidis M23864:W2(grey)]
gi|329737055|gb|EGG73310.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU045]
gi|341650937|gb|EGS74746.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU105]
gi|341656334|gb|EGS80053.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU109]
gi|365226195|gb|EHM67417.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU071]
gi|374401992|gb|EHQ73038.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU041]
gi|374403651|gb|EHQ74651.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU065]
gi|374817620|gb|EHR81799.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU117]
gi|374817690|gb|EHR81868.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU120]
gi|374828406|gb|EHR92241.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU123]
gi|374829542|gb|EHR93342.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU125]
gi|374830048|gb|EHR93837.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU126]
gi|374838312|gb|EHS01859.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU127]
gi|383360202|gb|EID37605.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|383361268|gb|EID38646.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|394231928|gb|EJD77549.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM095]
gi|394232020|gb|EJD77640.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM087]
gi|394233655|gb|EJD79252.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM088]
gi|394239766|gb|EJD85199.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM070]
gi|394239902|gb|EJD85334.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM067]
gi|394248698|gb|EJD93929.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM049]
gi|394253219|gb|EJD98232.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM040]
gi|394255148|gb|EJE00107.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM039]
gi|394263487|gb|EJE08218.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM021]
gi|394264870|gb|EJE09539.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM020]
gi|394268771|gb|EJE13325.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM018]
gi|394275600|gb|EJE19973.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM008]
gi|394277384|gb|EJE21708.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM003]
gi|394279091|gb|EJE23401.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM001]
gi|394283093|gb|EJE27270.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05005]
gi|394285291|gb|EJE29374.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04008]
gi|394287473|gb|EJE31433.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH08001]
gi|394290791|gb|EJE34637.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05001]
gi|394294959|gb|EJE38619.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05003]
gi|394296960|gb|EJE40574.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH06004]
gi|394298438|gb|EJE42008.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04003]
gi|394301279|gb|EJE44741.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051668]
gi|394303598|gb|EJE47016.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051475]
gi|406656365|gb|EKC82772.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
AU12-03]
gi|410879288|gb|EKS27138.1| preprotein translocase subunit secY [Staphylococcus epidermidis
BVS058A4]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|417645736|ref|ZP_12295629.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU144]
gi|329731201|gb|EGG67571.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU144]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNITRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|444913354|ref|ZP_21233506.1| Preprotein translocase secY subunit [Cystobacter fuscus DSM 2262]
gi|444715974|gb|ELW56834.1| Preprotein translocase secY subunit [Cystobacter fuscus DSM 2262]
Length = 448
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 159/348 (45%), Gaps = 39/348 (11%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
LN A F +E+R RL T +L+ + RIG FI PG DR + +F+ G
Sbjct: 3 LNAFANVFRIAELRSRLIYTLMLLAVYRIGIFINTPGVDRAAMN----AFMDAQRQSGGL 58
Query: 204 F--------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
F GA ++S F LGI P + ASI++Q+L +VPSL +L+KEG G +KI Y
Sbjct: 59 FSLFNLFSGGALNQMSIFGLGIMPYVSASIIIQLLAVVVPSLERLQKEGAGGRQKINQYT 118
Query: 256 WWISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMV----------TAFLLVCGAMTM 303
+ ++ + ++ + ++ + SL S A V+V T L G +
Sbjct: 119 RYGTIVLSTIQGIGISRWLASLGRS-DAGQSGFNQVVVPNDNLWFTFMTVISLTAGTAFI 177
Query: 304 SWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV 363
W+ + I+E G G G SLII GI+ G + K L L+ V +L LL V
Sbjct: 178 MWLGERITERGIGNGISLIIFAGIVAGLLPS-GKTLLDLVQQEVVSMAAVLALLVFMVGV 236
Query: 364 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 423
V V G R++ +QY A Y P +N +G+ P + +L+
Sbjct: 237 VAVVVYVERGMRRIPVQY-----AKRMAGRRMFAGQATYFPMKVNTAGVIPPIFAGAILS 291
Query: 424 FPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
FP+ L + PF Q ++ S+ + PWVY ++ F+ F F
Sbjct: 292 FPATLGTWF--PFLQGLQR------SIESSPWVYNGLFVLFIVFFAFF 331
>gi|33862096|ref|NP_893657.1| preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33634314|emb|CAE19999.1| preprotein translocase SecY subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 439
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 165/338 (48%), Gaps = 40/338 (11%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 205
F E+R R+ T L+++ R+G +IP+PG DR + SF+ +G G
Sbjct: 19 FLNKELRNRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSFIDQGGQLIGFLDIFTGG 74
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 264
L F LGI P I ASI++Q+L +P L L+K EG G KI ++SLG+
Sbjct: 75 GISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGF 134
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
L+++I + Y+I S + V+ T+ LV G+M + W + I+E G GQG+SL+I
Sbjct: 135 LQSIIFSLILRQYAIEGISETA-FVLQTSIALVTGSMIVMWFSEIITEKGIGQGASLVIF 193
Query: 325 VGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
+ I+ + L + + +LG +V LLGVF + + + V EG R+
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRGDVLGIAV--------LLGVFLLTIVGIIFVQEGARR 245
Query: 377 VKLQYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ + SA R+ S + + Y+P +N G+ P++ + L+ P +A++ G
Sbjct: 246 I-------PIVSAKRQIGNSSLLPTRQSYLPLKLNAGGVMPIIFASALIFLPITVANVTG 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + LNP +S PW Y + + F+ F
Sbjct: 299 NPILIKIAGSLNPGSS---NPWPYALTFFALILGFSYF 333
>gi|375110351|ref|ZP_09756576.1| preprotein translocase subunit SecY [Alishewanella jeotgali KCTC
22429]
gi|397171443|ref|ZP_10494847.1| preprotein translocase subunit SecY [Alishewanella aestuarii B11]
gi|374569593|gb|EHR40751.1| preprotein translocase subunit SecY [Alishewanella jeotgali KCTC
22429]
gi|396086906|gb|EJI84512.1| preprotein translocase subunit SecY [Alishewanella aestuarii B11]
Length = 442
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 28/339 (8%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
+ AA+ F SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ +
Sbjct: 8 SRAAKGGF-SELKSRLLFVLLAIIVFRLGSFVPIPGIDATVLAQLFEQ-QRGTIVEMFNM 65
Query: 205 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA + S F LGI P I ASI++Q+L + P++ +L+KEG G KI Y + +L
Sbjct: 66 FSGGALERASVFALGIMPYISASIIVQLLTVMHPAMAELKKEGEAGKRKINQYTRYGTLA 125
Query: 262 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
AIL+++ +A LP + + LV G M + W+ + I+E G G G
Sbjct: 126 LAILQSIGIAT-GLPNMMPGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGI 184
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 378
SL+I GI+ G+ + + + Q + + +L +GV I W VV E G R++
Sbjct: 185 SLLIFTGIVAGFPSAIGQTIEQARQGDLHF--LLLVAIGVIVIAITWFVVFFERGQRRIV 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--- 435
+ Y A + ++P +N +G+ P + + ++ FP +AS GS
Sbjct: 243 VNY-----AKRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGM 297
Query: 436 ---FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
F Q + L+P +P +Y +Y+ + F F
Sbjct: 298 VANFLQELALTLSP-----GQP-LYMMLYSAAIIFFCFF 330
>gi|116075749|ref|ZP_01473008.1| preprotein translocase SecY [Synechococcus sp. RS9916]
gi|116067064|gb|EAU72819.1| preprotein translocase SecY [Synechococcus sp. RS9916]
Length = 435
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 31/335 (9%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 202
+++ E+R R+ T L+++ RIG +IP+PG DR + F+ G + +G
Sbjct: 16 SQAVTSPELRNRILTTIGLLLLVRIGIYIPMPGIDRV----RFQEFLQGGGNLIGFLDIF 71
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLG 261
G L F LGI P I ASI+MQ+L +P L L+K EG G KI +++LG
Sbjct: 72 TGGGVSSLGVFALGILPFINASIIMQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALG 131
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+ ++++V+ A Y+ S V V+ TA LV GAM + WI + I+E G GQG+SL
Sbjct: 132 WGLIQSVVFALILKQYATEGLSEVV-FVIQTALALVTGAMVVMWISEVITERGIGQGASL 190
Query: 322 IICVGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKL 379
+I + I+ TL +SQ LG R L L + + T+ +V V E R+
Sbjct: 191 VIFLNIVATLPSTLGNAISQAQLGG--RQAVIGLATLTLVFLATIVGIVFVQEASRR--- 245
Query: 380 QYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ SA R+ + + Y+P +N G+ P++ + +L P+ LA + +
Sbjct: 246 ----LPIVSAKRQIGGTGTLPSRQSYLPMKLNAGGVMPIIFASAMLFLPATLAQVTKQEW 301
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ P + YY +Y + F+ F
Sbjct: 302 LAQAVGAIQPGKT------AYYVLYFALILGFSYF 330
>gi|108757580|ref|YP_631518.1| preprotein translocase subunit SecY [Myxococcus xanthus DK 1622]
gi|108461460|gb|ABF86645.1| preprotein translocase, SecY subunit [Myxococcus xanthus DK 1622]
Length = 448
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 158/344 (45%), Gaps = 31/344 (9%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 201
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 62
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + +
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGT 122
Query: 260 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
+ ++++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 123 IALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGE 182
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I+E G G G SLII GI+ G ++L L V +L L+ VF ++ + AV
Sbjct: 183 RITERGIGNGISLIIFAGIVAGLLPGAKQLLD-LTRQDVISMAEVLALV-VFMLIIIAAV 240
Query: 369 VVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V E G R++ +QY A Y P +N SG+ P + +L+FP+
Sbjct: 241 VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPAT 295
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L + PF Q + + W+Y ++ V F F
Sbjct: 296 LGTWF--PFLQGFQRAIEGNL------WIYNGLFVVMVIFFAYF 331
>gi|383809644|ref|ZP_09965159.1| preprotein translocase, SecY subunit [Rothia aeria F0474]
gi|383447460|gb|EID50442.1| preprotein translocase, SecY subunit [Rothia aeria F0474]
Length = 435
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 157/334 (47%), Gaps = 31/334 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++RR+L T +IVI R+G FIP PG + Q + +GS + D GA
Sbjct: 12 ADLRRKLLFTLGMIVIYRMGTFIPAPGISYGTVQQCIAN--NGSNHGIYDIVNLFSGGAL 69
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
L+LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L
Sbjct: 70 LQLSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNG 129
Query: 268 VIVACYSLPYSIYAASHSVK------HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+ + ++ ++ HV++ L G + W+ + I+E G G G SL
Sbjct: 130 TTIVSMARSGALIGNCPNIIPVDDIWHVLLIIITLCAGTTVIMWMGEQITERGVGNGMSL 189
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I I + + L + Q G+ V W + GV +V + V V + R+V +QY
Sbjct: 190 LIFTSIASSFPNALGAIERQ-QGAMVFW-----AVCGVGLVVMLAVVYVEQSVRRVPVQY 243
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI----LGSPFW 437
A I YIP +N +G+ P++ + LL+ P I+A + GSP
Sbjct: 244 -----AKRMIGRRTIGGTSTYIPLKVNMAGVIPLIFASSLLSLPGIIAQLNTPNNGSPPP 298
Query: 438 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V I N G P +Y T+Y F + F F
Sbjct: 299 EWVSWI-NTYLVRGDHP-LYITLYFFLILGFTYF 330
>gi|297621702|ref|YP_003709839.1| Preprotein translocase subunit SecY [Waddlia chondrophila WSU
86-1044]
gi|297377003|gb|ADI38833.1| Preprotein translocase subunit SecY [Waddlia chondrophila WSU
86-1044]
Length = 456
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 153/310 (49%), Gaps = 36/310 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
E+R+++ T +++V+ RIG FIP+PG + + Q YL ++G L GA
Sbjct: 13 ELRQKISFTLLMLVVCRIGAFIPVPGINGEVAIQ-YLRHLTGGEQNLFRMVDTFTGGAFS 71
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLV-QLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+++ LG+ P I ASI+MQ+ ++PSL ++++ G K+ ++L A +++
Sbjct: 72 QMTVIALGVVPYISASIMMQLFTALIPSLQREIQENPTLGRRKVNRLTRLVTLILAFIQS 131
Query: 268 VIVACYSLPYSIYAAS-------------HSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+ A Y++ +I H V V F + G + + WI + I+E+G
Sbjct: 132 AMFAKYAIQMNITKPGIIAGDLLNIQMFGHPVLFYAVMIFTMTTGTLFLMWIGEQITENG 191
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG----LLGVFTIVTMWAVVV 370
G G SLII +GI++ + + + QL S ++ VF +VT+ +++
Sbjct: 192 IGNGMSLIITLGIISSFPTAIGMIFQQLNLDSQEAGQLNFAIVAVIMAVFVLVTIGTILI 251
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSI 427
+G R++ LQY AR EV+ YIP +N +G+ PV+ + LL FP+
Sbjct: 252 VQGHRRIPLQY--------ARRVVGRKEVQGGNSYIPLKVNYAGVIPVIFASSLLMFPAT 303
Query: 428 LASILGSPFW 437
+A+ +G W
Sbjct: 304 IATFIGQGTW 313
>gi|428314351|ref|YP_007125328.1| protein translocase subunit SecY [Microcoleus sp. PCC 7113]
gi|428255963|gb|AFZ21922.1| protein translocase subunit secY/sec61 alpha [Microcoleus sp. PCC
7113]
Length = 448
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 169/345 (48%), Gaps = 31/345 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS-FVSGSVDE 200
A E+F + + +R RL VT L++++R+G F+PLPG DR D + V G +D
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTIGLLIVARMGIFLPLPGIDRARFSADIQNNSVLGFLDI 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G + F LGI P I ASI++Q+L +PSL L+K EG G KI +++
Sbjct: 70 FSGGGIS-AVGIFALGILPFINASIILQLLTAAIPSLENLQKNEGEAGRRKISQLTRYVA 128
Query: 260 LGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
G+A++++V I A PY++ + TA L G+M + W+ + ++E G G G
Sbjct: 129 AGWAVIQSVGITAGLLRPYALDGGGP--LFIAETALALTAGSMFVMWLSELVTERGIGNG 186
Query: 319 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
+SL+I V I+ +TL + L+Q G +L L+ + IV + V V EG R+
Sbjct: 187 ASLLIFVNIVAVLPKTLGQTIELAQTGGRETVGKVVILLLVFLVMIVGI--VFVQEGTRR 244
Query: 377 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG- 433
+ + SA R+ E Y+P +N G+ P++ + +L P+ LA G
Sbjct: 245 I-------PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPASLAQFTGG 297
Query: 434 -------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q + ++ N + G PW+Y +Y + F+ F
Sbjct: 298 SANKGFFAQVHQGLVQVSNYLSPNGPTPWLYVLVYLVLIVFFSYF 342
>gi|338534515|ref|YP_004667849.1| preprotein translocase subunit SecY [Myxococcus fulvus HW-1]
gi|337260611|gb|AEI66771.1| preprotein translocase subunit SecY [Myxococcus fulvus HW-1]
Length = 462
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 158/344 (45%), Gaps = 31/344 (9%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 201
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 17 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 76
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + +
Sbjct: 77 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGT 136
Query: 260 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
+ ++++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 137 IALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGE 196
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I+E G G G SLII GI+ G ++L L V +L L+ VF ++ + AV
Sbjct: 197 RITERGIGNGISLIIFAGIVAGLLPGAKQLLD-LTRQDVISVAEVLALV-VFMLIIIAAV 254
Query: 369 VVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V E G R++ +QY A Y P +N SG+ P + +L+FP+
Sbjct: 255 VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPAT 309
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L + PF Q + + W+Y ++ V F F
Sbjct: 310 LGTWF--PFLQGFQRAIEGNL------WIYNGLFVLMVIFFAYF 345
>gi|111023116|ref|YP_706088.1| preprotein translocase subunit SecY [Rhodococcus jostii RHA1]
gi|226365615|ref|YP_002783398.1| preprotein translocase subunit SecY [Rhodococcus opacus B4]
gi|384106898|ref|ZP_10007802.1| preprotein translocase subunit SecY [Rhodococcus imtechensis
RKJ300]
gi|397736536|ref|ZP_10503218.1| preprotein translocase subunit secY [Rhodococcus sp. JVH1]
gi|419961195|ref|ZP_14477204.1| preprotein translocase subunit SecY [Rhodococcus opacus M213]
gi|424851604|ref|ZP_18276001.1| preprotein translocase, SecY subunit [Rhodococcus opacus PD630]
gi|432336131|ref|ZP_19587661.1| preprotein translocase subunit SecY [Rhodococcus wratislaviensis
IFP 2016]
gi|110822646|gb|ABG97930.1| preprotein translocase [Rhodococcus jostii RHA1]
gi|226244105|dbj|BAH54453.1| preprotein translocase SecY subunit [Rhodococcus opacus B4]
gi|356666269|gb|EHI46340.1| preprotein translocase, SecY subunit [Rhodococcus opacus PD630]
gi|383833349|gb|EID72812.1| preprotein translocase subunit SecY [Rhodococcus imtechensis
RKJ300]
gi|396927726|gb|EJI94953.1| preprotein translocase subunit secY [Rhodococcus sp. JVH1]
gi|414573516|gb|EKT84200.1| preprotein translocase subunit SecY [Rhodococcus opacus M213]
gi|430776899|gb|ELB92292.1| preprotein translocase subunit SecY [Rhodococcus wratislaviensis
IFP 2016]
Length = 437
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 162/336 (48%), Gaps = 36/336 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 208
++RR++ + L+ + RIG IP PG D R + Q +G S+ L GA L
Sbjct: 13 DLRRKILIALGLVALYRIGAVIPSPGVDYGNVRACVDQLSGGDSAGIYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+A
Sbjct: 73 QLSIFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQAT 132
Query: 269 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
IVA S + A S+ +++ ++ GA + W + I+E G G G SL
Sbjct: 133 GIVALASRGQLLQGCQEEIIADKSIFGLVIIVLVMTAGAALVMWFGEVITERGVGNGMSL 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 380
+I GI + +L G + ++ V + + VV V +G R++ +Q
Sbjct: 193 LIFSGIASRLPSEGKAILDSRGG-------LIFAIICVAALAIIAGVVFVEQGQRRIPVQ 245
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------ 434
Y + S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 246 YAKRMVGRKMYGGS-----STYLPLKVNQAGIIPVIFASSLLYLPNLIAQLTGATSSADP 300
Query: 435 PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + + ++NP V +Y+ + FFVF +
Sbjct: 301 SWWQRIINEYLVNPNNPV--YIVIYFALIVFFVFFY 334
>gi|119383532|ref|YP_914588.1| preprotein translocase subunit SecY [Paracoccus denitrificans
PD1222]
gi|119373299|gb|ABL68892.1| protein translocase subunit secY/sec61 alpha [Paracoccus
denitrificans PD1222]
Length = 457
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 13/285 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+E+R+R++ T L++I R+G +IP+PG D R + Q G + + GA +
Sbjct: 21 TELRQRIWFTLGLLIIYRLGTYIPVPGIDGAALRNFMDQAQAGI--GGILSMFTGGALGR 78
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q+L +VP+L Q++KEG G +KI Y + ++ A+ +A
Sbjct: 79 MGVFALGIMPYISASIIVQLLASMVPALEQMKKEGEQGRKKINQYTRYGTVALALFQAWG 138
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+A SL + A + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLEHGNLAHEPGMFFRASVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVA 197
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
L + L+Q +V P +LG++ + V + V + RK+ +QY ++
Sbjct: 198 EIPGHLAQFLAQGRSGAVS-TPVILGVMIMVAAVIAFVVFMERALRKIHIQYPRRQVGMK 256
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G+
Sbjct: 257 VYDGQ-----SSHLPIKVNPAGVIPAIFASSLLLLPVTISTFSGN 296
>gi|154507844|ref|ZP_02043486.1| hypothetical protein ACTODO_00326 [Actinomyces odontolyticus ATCC
17982]
gi|153797478|gb|EDN79898.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
ATCC 17982]
Length = 430
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 162/339 (47%), Gaps = 25/339 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESEASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ IL+A + ++ + SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCNHDIIKDRSVMTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P +A+
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPP-MAAQF 288
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GSP + V+ I + + G+ Y TIYA F F
Sbjct: 289 GSPNDKWVQWI-SAHFTQGSS--FYLTIYALMTLFFTFF 324
>gi|405351431|ref|ZP_11022914.1| Preprotein translocase secY subunit [Chondromyces apiculatus DSM
436]
gi|397093322|gb|EJJ24045.1| Preprotein translocase secY subunit [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 462
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 158/344 (45%), Gaps = 31/344 (9%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 201
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 17 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 76
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + +
Sbjct: 77 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGT 136
Query: 260 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
+ +I++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 137 IALSIVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGE 196
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I+E G G G SLII GI+ G ++L L V +L L+ VF ++ + AV
Sbjct: 197 RITERGIGNGISLIIFAGIVAGLLPGAKQLLD-LTRQDVISVAEVLALV-VFMLIIIAAV 254
Query: 369 VVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V E G R++ +QY A Y P +N SG+ P + +L+FP+
Sbjct: 255 VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPAT 309
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L + PF Q + + W+Y ++ V F F
Sbjct: 310 LGTWF--PFLQGFQRAIEGNL------WIYNGLFVVMVIFFAYF 345
>gi|149279644|ref|ZP_01885773.1| protein translocase subunit SecY [Pedobacter sp. BAL39]
gi|149229680|gb|EDM35070.1| protein translocase subunit SecY [Pedobacter sp. BAL39]
Length = 444
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 143/275 (52%), Gaps = 8/275 (2%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
E++ R+ T +++++ R + LPG D L+ ++ S + G +D G+ ++S
Sbjct: 15 QELKERIVFTLMILLVYRFVSHVVLPGVDATLLGENEKSGLLGLLDMFAG-GSFSRVSIL 73
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
LG+ P I ASI++Q+L VPS +++KEG G +K+ ++++ ++AV
Sbjct: 74 ALGVMPYISASIVVQLLGIAVPSFQKMQKEGESGRKKLNQITRYLTVAITAVQAVGYVKT 133
Query: 274 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
+P H++ VM T F+L G + + W+ + I++ G G G SLII VGI+
Sbjct: 134 QVPMEAIVIDHTLFFVMAT-FVLAAGTLFVMWLGEKITDKGIGNGISLIIMVGIIARLPI 192
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
LY+ ++ + S +L ++ +F +V M+ +++ +G RKV +QY A +
Sbjct: 193 ALYQEITSRIVSDGGLIALVLEIVALFAVV-MFTIMIVQGVRKVPVQY-----AKRIVGN 246
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V YIP +N +G+ P++ L+ P+ L
Sbjct: 247 RQFGGVRQYIPLKVNAAGVMPIIFAQALMFIPATL 281
>gi|358051316|ref|ZP_09145526.1| preprotein translocase subunit SecY [Staphylococcus simiae CCM
7213]
gi|357259136|gb|EHJ08983.1| preprotein translocase subunit SecY [Staphylococcus simiae CCM
7213]
Length = 430
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
SFFK+ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLTNITRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 ILAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + S +G +S+ W +LGL+ ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQSAFVGQEDTSLAWLK-VLGLIVSLILLTIGAIYVLEAK 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP +++G IY + LF F
Sbjct: 293 AEWAQNIANTANPSSNIG------MVIYIVLIILFTYF 324
>gi|168004573|ref|XP_001754986.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694090|gb|EDQ80440.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 543
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 154/330 (46%), Gaps = 33/330 (10%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE---LGDF--- 204
FFK ++ + + +++SRIG +IPL G DR S GS+D LG
Sbjct: 123 FFKGKLPEKFLILLGWLILSRIGTYIPLWGVDR--------SAFQGSIDTNSLLGTLNTF 174
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G+ +L LGI P I A I++Q+L + P L L +KEG G +K+ + W S+G
Sbjct: 175 SGGSIGRLGLASLGIVPFINAQIVVQLLGTVFPKLQDLQKKEGEAGRKKVLRWTKWASVG 234
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
F +++AV Y PY + SV+ + L GA+ I + IS+ G G+SL
Sbjct: 235 FGVIQAVGQVTYIRPYVM---DFSVEWAISAVAALTLGAVITMSIGEKISDLKLGNGTSL 291
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I I++ ++ + ++Q + +P + G +G F ++ + V V E RK+ + Y
Sbjct: 292 LIFTNIVSYLPSSIGQTVAQAINDGN--YPGLAGSIGAFLLLVLGIVYVQEAERKIPINY 349
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
AS + S Y+PF +N SG+ P++ ++ LLA P+ A G F +
Sbjct: 350 -----ASRFKASSKGLGKSAYLPFKVNSSGVMPIIFSSSLLALPASAARFTGLSFLKDAA 404
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P S +Y + FN F
Sbjct: 405 VAFYPNGS------LYLPANVLLIAFFNYF 428
>gi|293190239|ref|ZP_06608735.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
F0309]
gi|292821055|gb|EFF80008.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
F0309]
Length = 430
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 162/339 (47%), Gaps = 25/339 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESEASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ IL+A + ++ + SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCNHDIIKDRSVMTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P +A+
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPP-MAAQF 288
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GSP + V+ I + + G+ Y TIYA F F
Sbjct: 289 GSPDDKWVQWI-SAHFTQGSS--FYLTIYALMTLFFTFF 324
>gi|389795115|ref|ZP_10198250.1| preprotein translocase subunit SecY [Rhodanobacter fulvus Jip2]
gi|388431248|gb|EIL88332.1| preprotein translocase subunit SecY [Rhodanobacter fulvus Jip2]
Length = 440
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 32/347 (9%)
Query: 140 LSSVLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS- 197
+++ NA K +E+R+R+F +V+ R+G FIP+PG + P S V+G+
Sbjct: 1 MAAAKGNALGKLGKLTELRQRIFFVIGALVVFRLGSFIPVPGVN----PAAMTSLVNGNG 56
Query: 198 -VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
+D F GA + S F LG+ P I ASI++Q++ +VPSL LRKEG G K+ Y
Sbjct: 57 LMDMFNMFSGGALERFSVFALGVIPYISASIVIQMMGSVVPSLQALRKEGESGKRKMTMY 116
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICD 308
+ ++G A+ ++ +A +L + A V + +M + L G M + W+ +
Sbjct: 117 TRFGTVGLALFQSFGIAV-ALQKQVAAGGAPVVYHPGFGFIMASVIGLTAGTMFLMWLGE 175
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++E G G G SL+I GI+ G E + L + ++ + G+ VT + V
Sbjct: 176 QMTERGIGNGISLLIFAGIVAGLPEAVVHTLGMANNGELTVLKLLM-VFGLVLAVTAFVV 234
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ R++ + Y A + ++P IN SG+ P + + LL FP+
Sbjct: 235 FMERAQRRITVNY-----ARRGGGQNAYQNQSSHLPLKINMSGVIPPIFASSLLMFPATA 289
Query: 429 ASILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ G S + Q + + LNP P +Y +Y+ V F F
Sbjct: 290 ITWFGTGHQSRWLQELTQSLNP-----GEP-LYDIVYSILVIGFAFF 330
>gi|289548522|ref|YP_003473510.1| preprotein translocase subunit SecY [Thermocrinis albus DSM 14484]
gi|289182139|gb|ADC89383.1| preprotein translocase, SecY subunit [Thermocrinis albus DSM 14484]
Length = 431
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 165/339 (48%), Gaps = 24/339 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ ++ + R+RL T ++ I R+G IPLPG D + + + SF G++ L
Sbjct: 1 MLDYLKQALSLEDFRKRLVYTLFMLAIYRLGSHIPLPGVDTSALEEFFKSF-QGTIFYLY 59
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWI 258
D G +++ F LG+ P I ASI+MQ+L +P L +L KE D G KI Y ++
Sbjct: 60 DIFSGGNLARMTLFALGVMPYISASIMMQLLTVSIPELQRLAKEEGDYGRYKINQYTRYL 119
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISES 313
++ A ++++ VA + + + V V+ T LV M + W+ D I+E
Sbjct: 120 TILVAFVQSMGVALWLQGQASPKGTPIVPEGGPLFVVTTVVTLVASTMFLVWVGDRITEK 179
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTE 372
G G G S++I GI+ G+ + +M L SS PF +LG + V ++ V + E
Sbjct: 180 GIGNGMSILIFAGIVAGFPNAVIRMYQML--SSGDITPFKVLGAIIFVIGVVVFTVFIQE 237
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY R++ + Y+P INP+G+ P++ LL PS + +
Sbjct: 238 AERRIPIQY---PRRQVGRQE--VVGGSTYLPIKINPAGVIPIIFAQSLLIIPSTVLGFI 292
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P Q + + NP + ++Y +Y F+ F F
Sbjct: 293 KHPIAQALHDAFNPAS------FLYNFLYVLFIIFFTYF 325
>gi|415718735|ref|ZP_11467541.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1500E]
gi|415727950|ref|ZP_11471553.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6119V5]
gi|388059777|gb|EIK82495.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1500E]
gi|388065476|gb|EIK87958.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6119V5]
Length = 446
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 27/338 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVISDCTTKLASSKENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEA--VIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ ++V S Y + ++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCGQVIPDGGFWSLVVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
QG S++I + I +G+ L+ + GS W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWDIGWGTNGSDGDWTKFSI-VGGVLLVILVFVDFVELAQRR 244
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LGS 434
+ +QY + S Y+P IN SG+ P + + +LA P+++A
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQFGDKSK 299
Query: 435 PFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFN 469
P+ Q ++ L TS W +Y + FF F +
Sbjct: 300 PWVQWIENNLANSTS----AWYIALYTVMIVFFCFFYT 333
>gi|405980212|ref|ZP_11038552.1| preprotein translocase, SecY subunit [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390664|gb|EJZ85731.1| preprotein translocase, SecY subunit [Actinomyces turicensis
ACS-279-V-Col4]
Length = 430
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 168/341 (49%), Gaps = 29/341 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A++F ++RR+L T ++ + R+G +IP PG D I Q ++ +L
Sbjct: 1 MLSAFAQAFRTPDLRRKLLFTLFIMAMFRLGSYIPTPGVDSTAIQQCLAQQEEANLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ +L+A + +++ A S ++ +++ G + W+ + I+E
Sbjct: 121 IFLGVLQATTTLTLARTGRMFSGCSANVLADDSWWMFLIMIIIMMAGTGVVMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVV 370
G G G SL+I +T + ++ SQ+L G S +W + LL +F VT+ V +
Sbjct: 181 RGIGNGMSLLI-------FTSIIARLPSQMLAIGQSGKWGAVIAILLLLFA-VTLAVVFI 232
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ R++ +QY K R+ T YIP IN SG+ PV+ + +LA P ++A
Sbjct: 233 EQAQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPLMIAQ 287
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G+ V+ I ++ WVY TIYA + F F
Sbjct: 288 -FGTQTDGWVQWI---SANLHQGSWVYLTIYALLILFFAFF 324
>gi|119718105|ref|YP_925070.1| preprotein translocase subunit SecY [Nocardioides sp. JS614]
gi|119538766|gb|ABL83383.1| protein translocase subunit secY/sec61 alpha [Nocardioides sp.
JS614]
Length = 437
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 29/305 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++RR+L ++I + R+G +P PG D + GS +L
Sbjct: 1 MLSAFANAFRTPDLRRKLLFVVLIIGVFRLGSQVPTPGVDVGNVQACVDIATEGSNADLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SLVNMFSGGALLQLTIFALGIMPYITASIILQLLVVVIPRLEALKKEGQSGQTKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA----------SHSVKHVMVTAFLLVCGAMTMSWI 306
+++LG A+L+A + + ++ + +V + G + W+
Sbjct: 121 YLTLGLAVLQATGIVALARSGNLLQGCDPNTFPLLHDNGTSTFLVMVVTMTAGTAVIMWL 180
Query: 307 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 366
+ I+E G G G SL+I I+ G+ +L+ + SS WW F G++ V +V +
Sbjct: 181 GELITEHGIGNGMSLLIFTQIIAGFPSSLWS-----VQSSKGWWIF--GIVMVTGLVIVA 233
Query: 367 AVV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
AV+ V + R++ +QY + S YIP +N +G+ PV+ + LL P
Sbjct: 234 AVIFVEQAQRRIPVQYARRMVGRKMFGGS-----STYIPLKVNQAGVIPVIFASSLLYLP 288
Query: 426 SILAS 430
++L S
Sbjct: 289 AMLVS 293
>gi|255081923|ref|XP_002508180.1| SecY protein [Micromonas sp. RCC299]
gi|226523456|gb|ACO69438.1| SecY protein [Micromonas sp. RCC299]
Length = 487
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 148/293 (50%), Gaps = 21/293 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDELGDFGA 206
F S++ ++ +L+++SR+G +IP+ G DR + V G VD L G+
Sbjct: 66 NDFMNSKLPGKIGTVLLLLILSRVGTYIPISGVDRDAFAESLQGGGNVLGYVDTL-TGGS 124
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAIL 265
KL F LGI P I +SI+ Q+L + PSL +L+K EG G K + Y + +LGFA++
Sbjct: 125 ISKLGIFSLGIVPYINSSIIFQLLTSVFPSLKKLQKEEGEAGRRKFQQYQRYGALGFAVV 184
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+AV Y P + ++ ++ ++ +L GAM + +I + ++E G G+SL+I
Sbjct: 185 QAVGQCLYVRP---FVEDFNLGWLVESSAVLTAGAMILLYIGEVLTELKLGNGTSLLIFT 241
Query: 326 GILTGYTETLYKMLSQL--LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
I++ + + LSQ G + P G F + T+ V V E RK+ + Y
Sbjct: 242 NIISSLPSSFGQTLSQASEKGDAATVLPV---FFGAFFLTTLGIVYVQEAERKIPMNYST 298
Query: 384 -FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
F+ A+ Y+PF +N +G+ P++ + LLA P+ LA +P
Sbjct: 299 RFQAGGLAKSS--------YLPFKVNSAGVMPIIFASSLLALPATLARFAPNP 343
>gi|255282625|ref|ZP_05347180.1| preprotein translocase, SecY subunit [Bryantella formatexigens DSM
14469]
gi|255266918|gb|EET60123.1| preprotein translocase, SecY subunit [Marvinbryantia formatexigens
DSM 14469]
Length = 437
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 151/289 (52%), Gaps = 14/289 (4%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 208
F +IR+RL T ++V+ R+G +P+PG +R I Q + G+ + F G+
Sbjct: 9 FRVKDIRKRLLYTFGMLVVIRLGSQLPVPGVNREYISQFFAQQTDGAFNFFSAFTGGSFE 68
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
++S F L I+P I +SI+MQ+L +P L ++ K+G +G +KI + ++++ A++EA
Sbjct: 69 RMSIFALNITPYITSSIIMQLLTIAIPQLEEMHKDGEEGRKKITAITRYVTVALALIEAT 128
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ + + +K + V A G+ + W+ + I+E G G G S+++ + IL
Sbjct: 129 AMTVAFGRNGMIPDMNILKGITVVA-AWTAGSAFLMWVGERITEKGVGNGISIVLVINIL 187
Query: 329 TGYTE---TLYKMLSQLLGSSV-RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
+ TLY+ Q G S+ R + +L V I ++ +++++ R++ +QY
Sbjct: 188 SRIPSDIGTLYETFIQ--GKSLARGALAAVIILAVIAITIVFVIILSDAVRRIPVQY--- 242
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
A + + YIP +N +G+ PV+ L + PS++AS+LG
Sbjct: 243 --AKKMQGRKMMGGQSTYIPLKVNTAGVIPVIFAQSLFSMPSMIASVLG 289
>gi|148243233|ref|YP_001228390.1| preprotein translocase subunit SecY [Synechococcus sp. RCC307]
gi|147851543|emb|CAK29037.1| Preprotein translocase SecY subunit [Synechococcus sp. RCC307]
Length = 439
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 146/308 (47%), Gaps = 28/308 (9%)
Query: 175 FIPLPGFDRRLIPQDYLS----------FVSGSVDELGDFGAELKLSFFQLGISPQIVAS 224
+IP+PG DR Q F G + LG F LGI P I AS
Sbjct: 43 YIPIPGIDREAFQQFIQQGGQLIGFLDIFTGGGISALG---------IFALGILPFINAS 93
Query: 225 ILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAAS 283
I++Q+L +PSL L+K EG G KI +++LG+ +L++++ A PY++ +
Sbjct: 94 IILQLLTAALPSLEDLQKNEGEAGRRKIAQITRYVALGWGVLQSIVFAMILRPYALESVP 153
Query: 284 HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLL 343
V V TA LV G+M + WI + I+E G GQG+SL+I + I+ L +
Sbjct: 154 QVV-FVAQTALALVTGSMVVMWISEVITERGIGQGASLVIFLNIVATLPRALGSTVELAQ 212
Query: 344 GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYI 403
++ L+ VF I + V V EG R++ + ++ + A + E + Y+
Sbjct: 213 SGDRGTIAGIIVLVLVFLITILGIVCVQEGSRRIPIVSAKRQVGAGAM----LPERQSYL 268
Query: 404 PFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAF 463
P +N G+ P++ + ++ P +A++ S V LNP +S PW+Y ++
Sbjct: 269 PLKLNAGGVMPIIFASAVIFLPLTIANLTKSELLVRVAGYLNPNSST---PWLYALVFFG 325
Query: 464 FVFLFNIF 471
+ F+ F
Sbjct: 326 LICGFSFF 333
>gi|123966955|ref|YP_001012036.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9515]
gi|123201321|gb|ABM72929.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9515]
Length = 439
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 24/330 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 205
F E+R R+ T L+++ R+G +IP+PG DR + SF+ +G G
Sbjct: 19 FLNKELRNRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSFIDQGGQLIGFLDIFTGG 74
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 264
L F LGI P I ASI++Q+L +P L L+K EG G KI ++SLG+
Sbjct: 75 GISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGF 134
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
L+++I + Y++ S S V+ T+ LV G+M + W + I+E G GQG+SL+I
Sbjct: 135 LQSIIFSLILRQYAVEGISESA-FVLQTSIALVTGSMIVMWFSEIITEKGIGQGASLVIF 193
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
+ I+ + L + + ++ LLGVF + + + V EG R++
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRGDVLGIVVLLGVFLLTIVGIIFVQEGARRI------- 246
Query: 385 KLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
+ SA R+ S + + Y+P +N G+ P++ + L+ P +A++ G+P +
Sbjct: 247 PIVSAKRQIGSSSLLPTRQSYLPLKLNAGGVMPIIFASALIFLPITVANVTGNPVLIKLA 306
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +S PW Y + + F+ F
Sbjct: 307 GSLNPGSS---NPWPYALTFFALILGFSYF 333
>gi|374308531|ref|YP_005054962.1| preprotein translocase subunit SecY [Filifactor alocis ATCC 35896]
gi|291166859|gb|EFE28905.1| preprotein translocase, SecY subunit [Filifactor alocis ATCC 35896]
Length = 423
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 162/323 (50%), Gaps = 19/323 (5%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQL 215
+R+R+ TA+++V+ RIG IP G D LI S+ ++ GA + + F L
Sbjct: 14 LRKRILFTAMMLVVFRIGASIPTAGMDTSLIKNQLSKSNVLSLYDMMSGGALSQFTLFAL 73
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
G++P I +SI+MQ+L +PSL +L+K G DG +KI Y ++S+ A+ ++ +SL
Sbjct: 74 GVTPYITSSIVMQLLTVAIPSLEELQKSGEDGRKKISEYTRYLSVALALFQS-----FSL 128
Query: 276 PYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
Y ++ S + V L G + W+ + ++E G G G S+II GI++ Y
Sbjct: 129 VYGMFRGALLSQDLLPVFTIVITLTAGTTFLMWLGEIVTEKGIGNGVSMIIYAGIISRYP 188
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASAAR 391
++ + L L + P + + V +I + V+ V EG RK+ +QY A
Sbjct: 189 ISVKQTLE--LSKTGAINPIQIIVFLVVSIAIIIGVIMVLEGVRKIPVQY-----AKRVI 241
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH-VKEILNPETSV 450
+ +IP +N +G+ PV+ + ++ P ++ + + +Q+ V++ L+ +
Sbjct: 242 GKNTYGGQSSHIPLKVNQAGVIPVIFASSVMMLPEMMRFFVRNQEYQNFVQKYLSSNGNP 301
Query: 451 GARPWVYYTIYAFFVFLFNIFDI 473
G +++ I VF F+ F I
Sbjct: 302 GI--YIFSIIQFVLVFAFSYFYI 322
>gi|228474808|ref|ZP_04059539.1| preprotein translocase, SecY subunit [Staphylococcus hominis SK119]
gi|314935852|ref|ZP_07843204.1| preprotein translocase, SecY subunit [Staphylococcus hominis subsp.
hominis C80]
gi|418620259|ref|ZP_13183065.1| preprotein translocase, SecY subunit [Staphylococcus hominis
VCU122]
gi|228271471|gb|EEK12839.1| preprotein translocase, SecY subunit [Staphylococcus hominis SK119]
gi|313656417|gb|EFS20157.1| preprotein translocase, SecY subunit [Staphylococcus hominis subsp.
hominis C80]
gi|374822867|gb|EHR86879.1| preprotein translocase, SecY subunit [Staphylococcus hominis
VCU122]
Length = 430
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 25/329 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
SFFK+ E+R ++F T ++VI +IG +IP PG + P + G L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPE--PFEQQGSDQGVAALLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEVGKRKLSNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMS-----WICDTISESGFGQGSS 320
+++ +A ++ Y + H V ++LL+ +T W+ D I++ G G G S
Sbjct: 125 QSIGMA---FQFNNYLGGKLIIHQSVMSYLLIAVVLTTGTAFLIWLGDQITQFGVGNGIS 181
Query: 321 LIICVGILTGYTETLYKMLSQ-LLGS--SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
+II GIL+ ++ + + Q +G+ + W ++GL+ ++T+ A+ V E RK+
Sbjct: 182 IIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLILLTIGAIYVLEAKRKI 241
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADW 295
Query: 438 -QHVKEILNPETSVGARPWVYYTI-YAFF 464
Q++ E NP + G +V I +A+F
Sbjct: 296 AQNIAEYANPSNTYGMIVYVILIIAFAYF 324
>gi|373455322|ref|ZP_09547158.1| preprotein translocase, SecY subunit [Dialister succinatiphilus YIT
11850]
gi|371934962|gb|EHO62735.1| preprotein translocase, SecY subunit [Dialister succinatiphilus YIT
11850]
Length = 420
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 21/328 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A F E++ R+ T ++ VI R+G IP+PG D +I F SG++ D
Sbjct: 6 ANFFANKELKDRILFTFLMFVIFRLGVHIPVPGVDSSVIES---LFTSGNLFGFLDLFAG 62
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA K S F + I+P I +SI+MQ+L ++P+L + RK+G +G+++I+ + ++ A
Sbjct: 63 GALSKFSIFAMSITPYINSSIIMQLLTAVIPTLEEWRKDGAEGYKRIQKVTRYFTIFLAA 122
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++A Y+L + +S + +L G + WI D I+E G G G SLII
Sbjct: 123 VQA-FGMTYALRINNALVDNSWLYFFFVIVVLTAGTCLLMWIGDKITEHGIGNGISLIIF 181
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
GI+ + + + ++ L ++ PF L L V + + V+ V EG R++ +QY
Sbjct: 182 CGIVARFPQAISTVVDYLKVGTIS--PFQLLLFLVIALAMILMVIEVNEGQRRIPIQY-- 237
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
A Y+P +N +G+ P++ + +L P LA + HV +
Sbjct: 238 ---AKRVIGRRMYGGHSTYLPLKVNQAGVIPIIFASSILMLPITLAQFI------HVSWV 288
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ G W Y F +F+F F
Sbjct: 289 QSIGNFFGWGTWPNTICYGFLIFIFTYF 316
>gi|375337681|ref|ZP_09779025.1| preprotein translocase subunit SecY [Succinivibrionaceae bacterium
WG-1]
Length = 443
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 31/334 (9%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAE 207
KSE+ R+ +VI R+G +IP+PG + ++ F S + LG F GA
Sbjct: 14 KSELMNRILFVIFGLVIFRLGSYIPVPGINTNVLEN---MFDSEGGNVLGMFNMFSGGAL 70
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+ S LGI P I ASI++Q+ +VP L +L+KEG G I Y W +L +++A
Sbjct: 71 SRASILALGIMPYISASIIIQLASVVVPRLAELKKEGESGRRTITKYTRWGTLILGLVQA 130
Query: 268 VIVACYSLPYSIYA----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+A Y LP I A+ + ++V L G M + W+ + I+E G G G SL+I
Sbjct: 131 TGIA-YGLPNMIPGLVDEANMGWQFIVVATISLTTGTMFLMWLGEQITERGIGNGISLLI 189
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
GI+ G + Q + ++ +L + VT + V V G R++ + Y
Sbjct: 190 FAGIVAGLPHAIAATFEQTRQGELNVIGLLI-ILAIVVAVTYFVVFVERGQRRITVNY-- 246
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFW 437
K + R SP + ++P +N SG+ P + + ++ FPS +A+ G +
Sbjct: 247 MKRQNGNRVYSPPST---HLPLKLNMSGVIPAIFASSIILFPSTIAAWFGKGQGTFASIL 303
Query: 438 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ IL+P +P +Y +YA + F F
Sbjct: 304 SEISSILSP-----GQP-LYEILYAVAIIFFCFF 331
>gi|399528221|ref|ZP_10767875.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM39]
gi|398361273|gb|EJN45048.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM39]
Length = 430
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 25/339 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ IL+A + ++ + SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCQYDIIKDRSVLTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P +A+
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPP-MAAQF 288
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G P Q V+ I + + G+ Y TIYA F F
Sbjct: 289 GKPDDQWVQWI-SAHFTQGST--FYLTIYALMTLFFTFF 324
>gi|238922849|ref|YP_002936362.1| preprotein translocase subunit SecY [Eubacterium rectale ATCC
33656]
gi|238874521|gb|ACR74228.1| preprotein translocase subunit SecY [Eubacterium rectale ATCC
33656]
Length = 439
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R R+ T +++++ RIG +P+PG + Q +L+ S S D LG
Sbjct: 1 MLKTLRNAFKIKDVRNRILFTFMMLIVIRIGSELPIPGVKGSVF-QSWLN--SKSADGLG 57
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
G+ ++S F L I+P I +SI+MQ+L +P L +++++G DG +KI +
Sbjct: 58 FVDAITGGSFSQMSVFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEDGRKKIVEITRY 117
Query: 258 ISLGFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
+++ +LE+V ++ Y Y +V V+ + L G+ + WI + I+E G
Sbjct: 118 LTIALGLLESVMMVIGFYRQNYLTEKTPLTVIMVVTS---LTAGSAVLMWIGERITEKGV 174
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRW-WPFMLGLLGVFTIVTM--WAVVVTE 372
G G S+++ + I++ E L + SQ + S+ + GL+ V I M + V++ +
Sbjct: 175 GNGISIVLTINIISRIPEDLSTLWSQFIASAANIPKAIVAGLIIVAIIAAMVVFVVLLQD 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
RK+ +QY +S R + + + IP +N SG+ PV+ L+ P I+AS L
Sbjct: 235 AQRKIPVQY-----SSKIRGNKQMGGQQTCIPLKVNTSGVIPVIFAQSLMQTPVIIASFL 289
Query: 433 GS 434
G
Sbjct: 290 GK 291
>gi|380300442|ref|ZP_09850135.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
squillarum M-6-3]
Length = 434
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 160/342 (46%), Gaps = 27/342 (7%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELG 202
+N+ + E+R ++ T L+ + R+G FIP PGFD ++ S +GS LG
Sbjct: 1 MNSFVRALRTPELRNKILFTLGLLAVYRLGVFIPTPGFDYTNVMTCSDQSQAAGSSSVLG 60
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y +
Sbjct: 61 MVSLFSGGALLQLSIFSLGVMPYITASIIIQLLRVVIPRFEALHKEGQSGTAKLTQYTRY 120
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++G AIL++ + + + S+ +++ + G + + W+ + I
Sbjct: 121 LTIGLAILQSTTIITLVRSGNFFPGCTLELIPDQSIPALVLMVLTMTVGTVLIMWMGEMI 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
+E G G G SL+I I + L ++ +L G W F L +L + +V + V V
Sbjct: 181 TERGIGNGMSLLIFTSIAASFPVALGQIF-ELQG----WLTFSLVIL-IALLVMLGVVFV 234
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ R++ +QY A YIP +N +G+ PV+ + +LA P++ AS
Sbjct: 235 EQSQRRIPVQY-----AKRMVGRRMYGGTSTYIPIKVNQAGVIPVIFASSILALPTMAAS 289
Query: 431 ILGSPFWQHVKEILNPETSVGAR-PWVYYTIYAFFVFLFNIF 471
G P V I N +GA W+Y +Y + F F
Sbjct: 290 -FGEPGEPWVDWI-NTHLVMGASFSWIYALVYVALIIFFAFF 329
>gi|291523750|emb|CBK89337.1| protein translocase subunit secY/sec61 alpha [Eubacterium rectale
DSM 17629]
gi|291528784|emb|CBK94370.1| protein translocase subunit secY/sec61 alpha [Eubacterium rectale
M104/1]
Length = 439
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R R+ T +++++ RIG +P+PG + Q +L+ S S D LG
Sbjct: 1 MLKTLRNAFKIKDVRNRILFTFMMLIVIRIGSELPIPGVKGSVF-QSWLN--SKSTDGLG 57
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
G+ ++S F L I+P I +SI+MQ+L +P L +++++G DG +KI +
Sbjct: 58 FVDAITGGSFSQMSVFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEDGRKKIVEITRY 117
Query: 258 ISLGFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
+++ +LE+V ++ Y Y +V V+ + L G+ + WI + I+E G
Sbjct: 118 LTIALGLLESVMMVIGFYRQNYLTEKTPLTVIMVVTS---LTAGSAVLMWIGERITEKGV 174
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRW-WPFMLGLLGVFTIVTM--WAVVVTE 372
G G S+++ + I++ E L + SQ + S+ + GL+ V I M + V++ +
Sbjct: 175 GNGISIVLTINIISRIPEDLSTLWSQFIASAANVPKAIVAGLIIVAIIAAMVVFVVLLQD 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
RK+ +QY +S R + + + IP +N SG+ PV+ L+ P I+AS L
Sbjct: 235 AQRKIPVQY-----SSKIRGNKQMGGQQTCIPLKVNTSGVIPVIFAQSLMQTPVIIASFL 289
Query: 433 GS 434
G
Sbjct: 290 GK 291
>gi|428777699|ref|YP_007169486.1| protein translocase subunit SecY [Halothece sp. PCC 7418]
gi|428691978|gb|AFZ45272.1| protein translocase subunit secY/sec61 alpha [Halothece sp. PCC
7418]
Length = 450
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 55/358 (15%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
NA E+F + + +R RL +T LI++ R+G IP+PG DR + +L+F
Sbjct: 10 NAQETFMQMAQAAGLRSRLLITVGLILLVRLGVRIPVPGIDRASFAEAVQNSPISGFLNF 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+SG G + F LGI P I ASI+MQ+L +P L L+K EG G KI
Sbjct: 70 LSG--------GGLSAVGIFALGILPFINASIIMQLLTAGLPYLENLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++L A+ + +A + PY A + ++ T L G+M + W+ + I+E
Sbjct: 122 QITRYVALASAVFNSFGLASFVQPY---AYNPGPIFLLKTVIALTAGSMFVIWLSELITE 178
Query: 313 SGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
G G G SL+I V I+ TL + +Q G +L L VF ++ + V V
Sbjct: 179 RGIGNGPSLLIFVNIVAVLPRTLGNTIEFAQTGGREAVAQVLILAL--VFLVMIVGIVFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
EG R++ + SA R+ E Y+P +N G+ P++ + LL PS L
Sbjct: 237 QEGTRRI-------PIVSARRQVGRRLYRERTSYLPLRVNQGGVLPIIFASTLLILPSSL 289
Query: 429 ASILG---------------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A + + +NP G PW+Y TIY + F+ F
Sbjct: 290 AQFTQGGGGEEEAAGIGATINDILVQISTYMNPS---GPTPWLYVTIYLLLILFFSYF 344
>gi|53803437|ref|YP_114768.1| preprotein translocase subunit SecY [Methylococcus capsulatus str.
Bath]
gi|53757198|gb|AAU91489.1| preprotein translocase, SecY subunit [Methylococcus capsulatus str.
Bath]
Length = 441
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 160/332 (48%), Gaps = 30/332 (9%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
+E+R+RL FV LIV RIG IP+PG D + + + S +D + F GA +L
Sbjct: 16 TELRQRLLFVVGALIVF-RIGAHIPIPGVDPKALAAMFNQQGSSILDMVNMFSGGALKRL 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A V
Sbjct: 75 SIFALGIMPYISASIILQLMTIVVPKLEQLKKEGESGRKKINQYTRYATVVLASFQATGV 134
Query: 271 ACYSLPYSIYAA----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A S A S + V +TA LV G M + W+ + ++E G G G S+II G
Sbjct: 135 AMALQNQSAGGAPIVVSPGFQFVALTAISLVTGTMFLMWLGEQVTERGLGNGISIIIFAG 194
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFK 385
I+ G + L L + F + + + W VV V +G R++ + Y
Sbjct: 195 IVAGLPSAVGGTLE--LARTGELGAFSIIGIAAIAVAVTWLVVFVEKGQRRITINY---- 248
Query: 386 LASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---FW-QH 439
A R++ + ++P +N SG+ P + + ++ FP+ LA G+ W Q
Sbjct: 249 ---AKRQEGRRMYAAQKSFLPLKLNMSGVIPPIFASSIILFPATLAGWFGNSEKLIWLQD 305
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+P +P +Y YA + F F
Sbjct: 306 IASTLSP-----GQP-LYVLCYAAAIMFFCFF 331
>gi|418607973|ref|ZP_13171191.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU057]
gi|374403134|gb|EHQ74143.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU057]
Length = 430
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILVFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>gi|392406865|ref|YP_006443473.1| protein translocase subunit secY/sec61 alpha [Anaerobaculum mobile
DSM 13181]
gi|390620001|gb|AFM21148.1| protein translocase subunit secY/sec61 alpha [Anaerobaculum mobile
DSM 13181]
Length = 430
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 160/318 (50%), Gaps = 23/318 (7%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQ 214
R LFV +L+V R+G IP PG D + + F G V L D GA + S F
Sbjct: 17 RILFVLGILLVF-RLGAHIPTPGVDAKAMAS---LFEQGGVLNLFDLFAGGALRRFSIFA 72
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG++P I ASI+MQ+L ++P++ +++KEG +G KI Y ++ F+ ++AV + +
Sbjct: 73 LGVTPYINASIVMQLLAVVIPAVEKMQKEGEEGRRKIVQYTRISTILFSAIQAVGMVLWL 132
Query: 275 LPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
+ IY SV +VT LV G++ + W+ + IS+ G G G SL+I GI+ E
Sbjct: 133 RSMNVIYVGGISVFVAIVT---LVAGSIAVMWLGEMISDHGIGNGISLLIFAGIVARIPE 189
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
++ + +LL + +L L + IV +++ EG R++ +QY + +
Sbjct: 190 SITRTF-KLLRTGELNLITLLLALIIMVIVIAGCILLQEGQRRLPVQYAKRVVGTKVYGG 248
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 453
+IP +N +G+ P++ + +L FPS +A F Q + ++L+P +
Sbjct: 249 Q-----TTFIPLRVNSAGVIPIIFASSVLLFPSTIARFFSGGFAQAISKLLSPSSP---- 299
Query: 454 PWVYYTIYAFFVFLFNIF 471
+Y +Y + F F
Sbjct: 300 --LYMVLYVLLIIFFTYF 315
>gi|414076527|ref|YP_006995845.1| preprotein translocase subunit SecY [Anabaena sp. 90]
gi|413969943|gb|AFW94032.1| preprotein translocase subunit SecY [Anabaena sp. 90]
Length = 437
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 172/341 (50%), Gaps = 33/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R RL VT ++++ R+G F+P+PG DR + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDR----PKFAEAISGNNSIF 64
Query: 202 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTSALPSLENLQKNEGEAGRRKISQIT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++++ +AI+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVIWAIIQSV--AFSALFLQQFAKTPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 316 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G+SL+I V I+ ++L L Q+ G + +L ++ +FTIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVVVFMFTIVGI--VFVQEG 240
Query: 374 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 241 MRRI-------PIISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLVANF 293
Query: 432 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + V L+P G+ PWVY +Y + F+ F
Sbjct: 294 TKNPELANIVNTYLSPG---GSAPWVYALVYLTSIVFFSYF 331
>gi|345303858|ref|YP_004825760.1| preprotein translocase subunit SecY [Rhodothermus marinus
SG0.5JP17-172]
gi|345113091|gb|AEN73923.1| preprotein translocase, SecY subunit [Rhodothermus marinus
SG0.5JP17-172]
Length = 438
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 163/326 (50%), Gaps = 25/326 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
E+R+R+ T L+V+ R+G ++ LPG D ++ + + ++ L D GA +
Sbjct: 15 EELRQRVLYTLGLLVVYRLGTYVTLPGVDAHILAEVNRQAGTNNLFGLIDLFVGGAFSQA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q++ +VP +L++EG +G KI ++++G L+AV
Sbjct: 75 GIFALGIMPYITASIIIQLMGAVVPYFQKLQREGEEGRRKITQLTRYLTVGITALQAVGY 134
Query: 271 ACYSLPYSIYAASHSVK---HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
A +L Y + V +++ +L G + + W+ + I+E+G G G SLII V I
Sbjct: 135 AI-NLRYGATGQAIVVSPAFFMLIAVIVLTAGTVFVMWLGERITENGIGNGISLIIMVSI 193
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ + +Y +++ F++ L L VF ++T V+VT+G R++ +QY K
Sbjct: 194 IAFLPQAVYNEF------TLKDNLFIVLLELAVFVVITAGVVLVTQGTRRIPVQYA--KR 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILN 445
R +T+ Y+P +N +G+ P++ ++ P+ +A+ GS F Q +
Sbjct: 246 VVGRRVYGGVTQ---YLPLRVNAAGVMPIIFAQSIMFVPATIATFFPGSDFMQQFGSFFS 302
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIF 471
+ W Y +++ V F F
Sbjct: 303 DISG-----WGYSSLFFLLVVFFTYF 323
>gi|254430806|ref|ZP_05044509.1| preprotein translocase, SecY subunit [Cyanobium sp. PCC 7001]
gi|197625259|gb|EDY37818.1| preprotein translocase, SecY subunit [Cyanobium sp. PCC 7001]
Length = 439
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 154/306 (50%), Gaps = 24/306 (7%)
Query: 175 FIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCH 232
+IP+PG DR QD+LS + L F G L F LGI P I ASI++Q+L
Sbjct: 43 YIPVPGIDRVAF-QDFLSRGGQLIGFLDIFTGGGLSTLGVFALGILPFINASIIIQLLTA 101
Query: 233 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 291
+P L L+K EG G KI +++LG+ IL++ + A Y+ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGILQSTVFALILRQYATEGLSEPV-FVLQ 160
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 351
TA LV G+M + WI + I+E G GQG+SL+I V I+ L + +L S R
Sbjct: 161 TALALVTGSMIVMWISEVITERGIGQGASLVIFVNIVATLPRALGSTI-ELAQSGDRSTV 219
Query: 352 FMLGLLGVFTIVTMWAVV-VTEGCRKV-----KLQYYGFKLASAAREDSPITEVEPYIPF 405
+ +L + ++T+ ++ V EG R++ K Q G L AAR+ Y+P
Sbjct: 220 GGIVVLVLVFLLTIVGIIFVQEGNRRIPIVSAKRQVGGVNLL-AARQS--------YLPL 270
Query: 406 NINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFV 465
+N G+ P++ + ++ P +A++ SP+ V LNP +S PW+Y ++ +
Sbjct: 271 KLNAGGVMPIIFASAVVFLPLTIANLTRSPWLIQVAGYLNPNSST---PWLYALVFFGLI 327
Query: 466 FLFNIF 471
F+ F
Sbjct: 328 VGFSFF 333
>gi|399525055|ref|ZP_10765534.1| preprotein translocase, SecY subunit [Atopobium sp. ICM58]
gi|398373587|gb|EJN51503.1| preprotein translocase, SecY subunit [Atopobium sp. ICM58]
Length = 430
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 45/349 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A++F ++RR+L T ++ + R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAVFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ IL+A + ++ A SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQACSEDVIRDRSVMTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P ++A
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPPMIAQF- 288
Query: 433 GSPFWQHVKEILNPETSVGARPWV----------YYTIYAFFVFLFNIF 471
+T G W+ Y TIYA F F
Sbjct: 289 -------------GKTEDGWVQWISAHFTQGSSFYLTIYALMTLFFTFF 324
>gi|442321573|ref|YP_007361594.1| preprotein translocase subunit SecY [Myxococcus stipitatus DSM
14675]
gi|441489215|gb|AGC45910.1| preprotein translocase subunit SecY [Myxococcus stipitatus DSM
14675]
Length = 448
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 158/346 (45%), Gaps = 35/346 (10%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 201
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRAAMNAFMDAQKQSGGLVSLF 62
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA ++S F LGI P + ASI+MQ+L ++PSL +L+KEG G +KI Y + +
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVIPSLERLQKEGAAGRQKINQYTRYGT 122
Query: 260 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
+ ++++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 123 IVLSVIQGIGISRWLASLGRSDAGQSGFNQVVVPDDSVWFTFMTVISLTAGTAFIMWLGE 182
Query: 309 TISESGFGQGSSLIICVGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
I+E G G G SLII GI+ G TL +M Q + + ++ +L + +V
Sbjct: 183 RITERGIGNGISLIIFAGIVAGVLPGANTLLEMTQQEVIAVAEVLALLVFMLLIIAVV-- 240
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V V G R++ +QY A Y P +N +G+ P + +L+FP
Sbjct: 241 --VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTAGVIPPIFAGAVLSFP 293
Query: 426 SILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L + PF Q + + ++ W+Y ++ V F F
Sbjct: 294 ATLGTWF--PFLQ------DAQRAIEGNLWIYNGLFVLLVIFFAYF 331
>gi|332712150|ref|ZP_08432078.1| protein translocase subunit secY/sec61 alpha [Moorea producens 3L]
gi|332348956|gb|EGJ28568.1| protein translocase subunit secY/sec61 alpha [Moorea producens 3L]
Length = 446
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 170/351 (48%), Gaps = 47/351 (13%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY--------LSFV 194
A E+F + + +R RL VT L++++R+G F+P+PG DR + L F
Sbjct: 11 AQETFMQMAQAAGLRGRLLVTVGLLILARLGVFLPVPGIDRARFSAELQNSPFVGLLDFF 70
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKS 253
SG G F A L F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 71 SG-----GGFSA---LGIFALGILPYINASIILQLLTAAIPALENLQKNEGEAGRRKIGQ 122
Query: 254 YIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
+++LG+++++++ ++ ++ +++ + V T L G+M + W+ + I+E
Sbjct: 123 ITRYVALGWSVIQSIGLSLWAQRFAVEPGAF---FVFETVLALTAGSMFVMWLSELITER 179
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G+SL+I V I+ TL + + ++ LL VF ++ + V V EG
Sbjct: 180 GIGNGASLLIFVNIVAVLPRTLGQTIELAQTGGRETVGKVIVLLLVFLVMIVGIVFVQEG 239
Query: 374 CRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
R++ + +A R+ E + Y+P +N G+ P++ + +L P+ LA I
Sbjct: 240 SRRI-------PIITARRQVGKRLYRERKNYLPLRLNQGGVMPIIFASAVLILPTSLAGI 292
Query: 432 ---------LGS--PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LGS + LNP G PWVY +Y + F+ F
Sbjct: 293 TSGDNSNGLLGSINQVLIQIANYLNPN---GQTPWVYVAVYLVLILFFSYF 340
>gi|83854953|ref|ZP_00948483.1| preprotein translocase SecY [Sulfitobacter sp. NAS-14.1]
gi|83941475|ref|ZP_00953937.1| preprotein translocase SecY [Sulfitobacter sp. EE-36]
gi|83842796|gb|EAP81963.1| preprotein translocase SecY [Sulfitobacter sp. NAS-14.1]
gi|83847295|gb|EAP85170.1| preprotein translocase SecY [Sulfitobacter sp. EE-36]
Length = 466
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 16/306 (5%)
Query: 137 FIRLSSVLNNAAESFFKS-----EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL 191
+I +S+V + AA + + + ++R R+ T L+++ R+G FIP+PG D + Q
Sbjct: 11 YIMVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGTALRQFME 70
Query: 192 SFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 249
S G + F GA ++ F LGI P I ASI++Q++ +VP+L QL+KEG G +
Sbjct: 71 SAGQGIGGMVSMFTGGALGRMGIFALGIMPYISASIIVQLMTSMVPALEQLKKEGEQGRK 130
Query: 250 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 309
KI Y + ++ A L+A +A SL AA + + LV G M + W+ +
Sbjct: 131 KINQYTRFGTVALATLQAYGLAV-SLEAGDIAADPGMYFRIACMITLVGGTMFLMWLGEQ 189
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAV 368
I+ G G G SLII VGI+ + + S G S P ++G+L + M+ V
Sbjct: 190 ITARGIGNGISLIIFVGIIAEVPAAIAQFFSS--GRSGAISPAIIVGVLVMVIATIMFVV 247
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ RK+ +QY ++ + ++P +NP+G+ P + + LL P +
Sbjct: 248 FMERALRKIHIQYPRRQVGQKMYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTI 302
Query: 429 ASILGS 434
++ G+
Sbjct: 303 STFSGN 308
>gi|317509244|ref|ZP_07966865.1| eubacterial secY protein [Segniliparus rugosus ATCC BAA-974]
gi|316252454|gb|EFV11903.1| eubacterial secY protein [Segniliparus rugosus ATCC BAA-974]
Length = 438
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 33/333 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGDFGAEL 208
++RR++ ++ ++V+ R+G +P PG + + + + G S+ L GA L
Sbjct: 14 DLRRKILISIGMVVLYRLGATLPSPGVNYKNVHECLDQVSKGDSQGVYSLINLFSGGALL 73
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE-A 267
+LS F +G+ P I ASI+ Q+L ++P QLRKEG G K+ Y ++++ A+L+ +
Sbjct: 74 QLSVFAIGVVPYITASIITQLLTVVIPRFEQLRKEGQSGQTKMTQYTRYLAVALALLQSS 133
Query: 268 VIVACYSLPYSIYAAS------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
IVA + + + S H + ++V ++ GA + W + ISE G G G SL
Sbjct: 134 AIVALANRRQLLSSCSKDILDEHELFQLIVIVLVMTAGATLVMWFGEIISERGIGNGMSL 193
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 380
+I GI ++L G + L+ V +V M +V+ + +G R++ +Q
Sbjct: 194 LIFSGIAARIPAEGKQILDSRGG-------VVFALVCVAALVIMASVIFIEQGQRRIPVQ 246
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSPFW 437
Y + S Y+P +N +G+ PV+ + LL P+++ +L G+ W
Sbjct: 247 YAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYVPNLITQLLSKNGTSGW 301
Query: 438 QHVKE--ILNPETSVGARPWVYYTIYAFFVFLF 468
Q + +LNP ++V VY+++ FF F +
Sbjct: 302 QRWMQNYLLNPSSAV--YIGVYFSLIVFFTFFY 332
>gi|383455050|ref|YP_005369039.1| preprotein translocase subunit SecY [Corallococcus coralloides DSM
2259]
gi|380734321|gb|AFE10323.1| preprotein translocase subunit SecY [Corallococcus coralloides DSM
2259]
Length = 448
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 159/347 (45%), Gaps = 37/347 (10%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 201
LN A F +E+R RL T VL+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLVLLSVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 62
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA ++S F LGI P + ASI++Q+L +VPSL +L+KEG G +KI Y + +
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIIQLLAVVVPSLERLQKEGAAGRQKINQYTRYGT 122
Query: 260 LGFAILEAVIVACY--SLPYSIYAASHSVKHVMV----------TAFLLVCGAMTMSWIC 307
+ +I++ V ++ + SL S A V+V T L G + W+
Sbjct: 123 IALSIVQGVGISRWLASLGRS-DAGQGGFNQVVVPNDNLWFTFMTVVSLTAGTAFIMWLG 181
Query: 308 DTISESGFGQGSSLIICVGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVT 364
+ I+E G G G SLII GI+ +TL + +Q + + +LGLL ++
Sbjct: 182 ERITERGIGNGISLIIFAGIVARVLPGAKTLLDLTTQEIVNVAA----VLGLLFFMLLII 237
Query: 365 MWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
V V G R+V +QY A Y P +N SG+ P + +L+F
Sbjct: 238 GVVVYVERGMRRVPIQY-----AKRMAGRRMFAGQATYFPMKVNASGVIPPIFAGAVLSF 292
Query: 425 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ L + PF Q + S+ WVY ++ V F+ F
Sbjct: 293 PATLGAWF--PFLQGFQR------SIEGNLWVYNGLFVLLVVFFSYF 331
>gi|427718738|ref|YP_007066732.1| protein translocase subunit SecY [Calothrix sp. PCC 7507]
gi|427351174|gb|AFY33898.1| protein translocase subunit secY/sec61 alpha [Calothrix sp. PCC
7507]
Length = 437
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 170/340 (50%), Gaps = 33/340 (9%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
A E+F + + +R RL VT ++++ R+G F+P+PG +R + +SG+ G
Sbjct: 10 AQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----DRFHEAISGNNSIFG 65
Query: 203 DF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 66 LLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAALPSLENLQKNEGEAGRRKISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++++G+AI+++ A +L +A V TA L G+M + W + ++E G G
Sbjct: 126 YVTVGWAIIQST--AFSALFLQQFALEPGPIFVAETAIALTAGSMFVMWASELVTERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I V I+ ++L L Q+ G + +L L+ +FTIV + V V EG
Sbjct: 184 NGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLFTIVGI--VFVQEGI 241
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 242 RRI-------PIISARRQVGRRVLAEQRSYLPLRLNAGGVMPIIFAAAILSLPLLIANFT 294
Query: 433 GSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + V L+P G++ W Y +Y + F+ F
Sbjct: 295 KNPELANIVNNYLSPG---GSQAWAYALVYLISIVFFSYF 331
>gi|269218986|ref|ZP_06162840.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212097|gb|EEZ78437.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
848 str. F0332]
Length = 428
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 23/338 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++RR+L T ++VI R+G F+P P + Q G L
Sbjct: 1 MLKAFAAAFRTPDLRRKLLFTVAIMVIYRLGTFVPAPFVSIHNVRQCAAQKGEGGFLNLL 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P QL KEG G K+ Y +++
Sbjct: 61 NMFSGGAMLQLSVFALGIMPYITASIIIQLLRVVIPRFEQLHKEGQSGTAKLTEYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAASH----SVKHVMVTAFLLVCGAMT--MSWICDTISES 313
+G +L++ + + H V +T +L A T + W+ + I+E
Sbjct: 121 IGLGVLQSAVYVSLANTTLFQGCRHQPIPGANPVKITMAILAMTAGTGLIMWLAELITER 180
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S++I GI + L ++ G W + +L VF +T+ V V +
Sbjct: 181 GVGNGMSILIFTGICANFPGMLLNVIRSNAG-----WKGAIVVLAVFLAITVVVVFVEQC 235
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY A I Y+P IN + + PV+ + LL P ++AS G
Sbjct: 236 QRRIPVQY-----AKRVVGRRMIGGSTTYLPIKINMANVIPVIFASSLLMLPQMIAS-FG 289
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V+ I + T G W YY +YA +F F F
Sbjct: 290 NQSSGWVQFIQSNLTRQGV--W-YYGLYALLIFGFTFF 324
>gi|407642080|ref|YP_006805839.1| preprotein translocase subunit SecY [Nocardia brasiliensis ATCC
700358]
gi|407304964|gb|AFT98864.1| preprotein translocase subunit SecY [Nocardia brasiliensis ATCC
700358]
Length = 440
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 38/342 (11%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-------ELG 202
+F ++RR++ T LI + R+G +P PG D + + Q+ + VSG D L
Sbjct: 8 AFRTPDLRRKILFTLGLIALYRLGAALPSPGVDYKAV-QECVKQVSGGEDAGIYQLINLF 66
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 67 SGGALLQLSVFAIGIMPYITASIIIQLLTVVIPRFEELRKEGQSGQTKMTQYTRYLSIAL 126
Query: 263 AILEAV-IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
AIL+A +VA S + A + + +++ ++ GA + W + I+E G
Sbjct: 127 AILQATGLVALASRGQLLQGCQKDIIADNGIFAMIIIVLVMTAGAALVMWFGEQITERGI 186
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGC 374
G G SL+I GI +L G + GL+ V + AV+ V +G
Sbjct: 187 GNGMSLLIFAGIAARIPTEGKSILDSRGG-------LVFGLVCVAAFAIIVAVIFVEQGQ 239
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 240 RRIPVQYAKRVVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLVAQLTSA 294
Query: 435 ------PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + K +++P V +Y+ + FF + +
Sbjct: 295 RNNPDPSWWQDIINKYLVSPGNPV--YIAIYFGLIVFFTYFY 334
>gi|83949768|ref|ZP_00958501.1| preprotein translocase SecY [Roseovarius nubinhibens ISM]
gi|83837667|gb|EAP76963.1| preprotein translocase SecY [Roseovarius nubinhibens ISM]
Length = 447
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 29/338 (8%)
Query: 145 NNAAESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
N + +F K+ ++R+R+F T L++I R+G ++P+PG D + F+ G+ +G
Sbjct: 4 NTSWSAFGKATDLRKRIFFTLGLLIIYRLGTWVPVPGID----GAELREFMEGAAASIGG 59
Query: 204 F------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA ++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y +
Sbjct: 60 MLSMFTGGALGRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
++ A L++ +A SL A+ + + LV G M + WI + I+ G G
Sbjct: 120 GTVALATLQSYGLAV-SLQSGGLASDPGMFFIASCMITLVGGTMFLMWIGEQITARGIGN 178
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRK 376
G SLII VGI+ L + + G S P ++ + + +VT+ VV E RK
Sbjct: 179 GISLIIFVGIIAELPAALAQFFAS--GRSGAMSPAVIVGVMLMVVVTIAFVVFMERALRK 236
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--- 433
+ +QY ++ + ++P +NP+G+ P + + LL P +++ G
Sbjct: 237 IHIQYPRRQVGMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNQT 291
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
SP + P +P +Y +A + F F
Sbjct: 292 SPVMSTILAYFGP-----GQP-LYLIFFALMIVFFAYF 323
>gi|86135788|ref|ZP_01054367.1| preprotein translocase SecY [Roseobacter sp. MED193]
gi|85826662|gb|EAQ46858.1| preprotein translocase SecY [Roseobacter sp. MED193]
Length = 454
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 144/281 (51%), Gaps = 13/281 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 210
+++R R+ T L+++ R+G FIP+PG D + ++++ G + + GA ++
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTFIPVPGIDANAL-RNFMEAAGQGIGGMVSMFTGGALGRM 79
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A +A +
Sbjct: 80 GIFALGIMPYISASIIVQLLTSMVPALEQLKKEGAQGQKKINQYTRYGTVALATAQAYGL 139
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A SL A + M LV G M + W+ + I++ G G G SLII VGI+
Sbjct: 140 AV-SLEAGDLATDPGMYFRMACMITLVGGTMFLMWLGEQITQRGLGNGISLIIFVGIIAE 198
Query: 331 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
++ + + G S P ++G++ + V M+ V + RK+ +QY ++
Sbjct: 199 VPASIAQFFAS--GRSGAISPAVIIGVILMVIAVIMFVVFMERALRKIHIQYPRRQVGMK 256
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ ++P +NP+G+ P + + LL P+ +++
Sbjct: 257 VYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPTTISA 292
>gi|374992999|ref|YP_004968498.1| preprotein translocase subunit SecY [Desulfosporosinus orientis DSM
765]
gi|357211365|gb|AET65983.1| preprotein translocase, SecY subunit [Desulfosporosinus orientis
DSM 765]
Length = 428
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 36/333 (10%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFG 205
E+R+++ T ++ +I RIG IP P DR + Q ++++ +SG G
Sbjct: 13 GELRKKIGYTLLMFLIFRIGAHIPTPYIDRDTLNQMLGSGAIMNFMNTISG--------G 64
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ LS F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y + ++G
Sbjct: 65 SFKSLSVFALSITPYITASIILQLLTIVIPSLERLSKEGDFGRKKITQYTRYSTVGLGFF 124
Query: 266 EAVIVACYSLPYSIYAA----SHSVK--HVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+A + L Y I AA + ++K ++ A +L G + W+ + I+E G G G
Sbjct: 125 QA-----FGLTYGIRAAVLVPTPAMKWPTYLLIAIVLTAGTSFLMWLGEAITEKGIGNGI 179
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SLII GI++ + + L + ++GL+ + VT + V EG R+V +
Sbjct: 180 SLIIFAGIVSRIPTAMTSLWDMLRVGEINSLT-IIGLVLIVIFVTAGVIYVQEGQRRVTV 238
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQ 438
QY A +IP +N +G+ PV+ LLAFP +AS + S F Q
Sbjct: 239 QY-----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAISLLAFPQTIASWMPTSAFAQ 293
Query: 439 HVKEILNPETSVGARPW--VYYTIYAFFVFLFN 469
V + + S+ + P+ VY + FF + +
Sbjct: 294 FVSKWFSMNGSITSIPYMLVYGALIIFFTYFYT 326
>gi|251793847|ref|YP_003008579.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
NJ8700]
gi|422337195|ref|ZP_16418167.1| preprotein translocase subunit secY [Aggregatibacter aphrophilus
F0387]
gi|247535246|gb|ACS98492.1| preprotein translocase, SecY subunit [Aggregatibacter aphrophilus
NJ8700]
gi|353345747|gb|EHB90038.1| preprotein translocase subunit secY [Aggregatibacter aphrophilus
F0387]
Length = 441
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 157/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++RRL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKRRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + VF VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHVLVLLLIAVTVFA-VTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWGGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYAAAIIFFSFF 329
>gi|149922192|ref|ZP_01910630.1| SecY protein [Plesiocystis pacifica SIR-1]
gi|149816932|gb|EDM76417.1| SecY protein [Plesiocystis pacifica SIR-1]
Length = 438
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 153/324 (47%), Gaps = 18/324 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E+RRR+ T ++ + R G F+ +PG DR ++ + G + F GA LS
Sbjct: 12 ELRRRVLFTLAMLAVYRFGIFVAVPGVDRTVMDKLVSQQTGGFLGYFNMFSGGALSNLSV 71
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
F LGI P I ASI+MQ++ ++P L QL+KEG G KI Y + ++G A+++ +A
Sbjct: 72 FALGIMPYISASIIMQLMTVVIPKLEQLQKEGETGRRKINQYSRYGTVGLALVQGYFMAS 131
Query: 273 Y----SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ + P + ++T L G + W+ + I+E G G G SLII GI+
Sbjct: 132 WLEGQNTPGQTLVLETGLPFKLMTMLSLTAGTCFLMWLGEQITERGIGNGISLIIFAGII 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 387
Y++ + + + P L +L V +V + VV+ E G R++ + Y A
Sbjct: 192 ADMPTASYQLAQKAIDDPENFGPLPLAMLLVVVLVVIAFVVIMERGQRRIPVIY-----A 246
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
+ Y+P IN +G+ P + + ++ FP+ +A + G+P+ Q
Sbjct: 247 KRVVGKRMFGGSQNYLPLRINNAGVIPPIFASSIIMFPAQIAGMTGNPYLQRFAAAF--- 303
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
S G W+Y T+Y F F
Sbjct: 304 -SYGN--WLYLTVYVALCIFFCYF 324
>gi|418322976|ref|ZP_12934277.1| preprotein translocase, SecY subunit [Staphylococcus pettenkoferi
VCU012]
gi|365230630|gb|EHM71716.1| preprotein translocase, SecY subunit [Staphylococcus pettenkoferi
VCU012]
Length = 430
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 156/313 (49%), Gaps = 20/313 (6%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
+FFK+ E+R ++F T ++VI +IG +IP+PG + Q S G D L F GA
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPVPGVNPNAFDQQQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDVGRKKLTNVTRYFAVILAFV 124
Query: 266 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y A S+ ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALLIDQSIMSYLLIAVVLTTGTAFLMWLGEQITQFGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQ-LLGS---SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ ++ + Q +G+ S+ W ++GL+ ++T+ A+ V + RKV +
Sbjct: 185 FAGILSTLPSSINQFYQQAFVGAEDVSMAWLK-VIGLIVGLILLTIGAIYVLQALRKVPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRIGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDADWAQ 297
Query: 439 HVKEILNPETSVG 451
V + NP ++G
Sbjct: 298 KVSSVANPSNNIG 310
>gi|242371877|ref|ZP_04817451.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
M23864:W1]
gi|242350384|gb|EES41985.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
M23864:W1]
Length = 430
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIDKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ ++ + L +S+ W ++GL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSIEQFGQSLFVGQDDTSLAWLK-IVGLVVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G ++ I +A+F
Sbjct: 298 NIADTANPSSNIGMIVYIVLIIAFAYF 324
>gi|158520745|ref|YP_001528615.1| preprotein translocase subunit SecY [Desulfococcus oleovorans Hxd3]
gi|158509571|gb|ABW66538.1| preprotein translocase, SecY subunit [Desulfococcus oleovorans
Hxd3]
Length = 429
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 28/332 (8%)
Query: 149 ESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--G 205
++ FK E++RR+ T ++ + RIG IP PG DR + + + + G + F G
Sbjct: 7 QNIFKIPELKRRILFTLSMLAVYRIGVMIPTPGIDREALARIFEAHKGGMLGMFNMFSGG 66
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A +LS F LGI P I A+I++++L VP L QL+KEG G +K+ Y + ++ +I+
Sbjct: 67 ALEQLSVFALGIMPYISAAIILELLTVAVPYLEQLKKEGEQGRKKLTQYTRYGTVVLSII 126
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ ++A + ++T L G + W+ + I+E G G G SLII
Sbjct: 127 QGFLMAV-GIEKMGAVIDPGWSFRLMTVITLTAGTAFIMWLGEQITEKGIGNGISLIIFA 185
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFT-IVTMWAVV-----VTEGCRKVKL 379
GI+ ++ + ++ +S +G+ GV +V M AVV + +G R++ +
Sbjct: 186 GIVA-------RLPAAIINTSRMISTGDMGIFGVLILLVFMVAVVGVIIFMEQGQRRIPI 238
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY A ++P IN SG+ P + + ++ FP+ +A + PF Q
Sbjct: 239 QY-----AKRVVGRRMYGGQSTHLPLKINTSGVIPPIFASSIMMFPATMAGFVDVPFVQD 293
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +L P W+Y + +F F F
Sbjct: 294 MSAVLMPGH------WIYNVFFVALIFFFCYF 319
>gi|400406268|ref|YP_006589016.1| protein translocase subunit secY/sec61 alpha [secondary
endosymbiont of Heteropsylla cubana]
gi|400364521|gb|AFP85588.1| protein translocase subunit secY/sec61 alpha [secondary
endosymbiont of Heteropsylla cubana]
Length = 443
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 15/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RR F +V+ RIG FIP+PG D ++ + L G++ E+ + GA +
Sbjct: 17 SELKRRFFFLIRALVVLRIGSFIPIPGIDATVLAK-LLDKQRGTIIEMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L I PS+ +++KEG G KI Y + +L AI +++ +
Sbjct: 76 SIFALGIMPYISASIIIQLLTVISPSMGEIKKEGAAGRRKINQYTRYGTLLLAIFQSIGI 135
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFL----LVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A LP + V + F LVCG M + W+ + I++ G G G S+II G
Sbjct: 136 AT-GLPNMPGMENLVVNPGAIFYFTAVISLVCGTMFLMWLGEQITDRGIGNGISMIIFAG 194
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + K + Q + + + + VF+++ + + V G R++ + Y
Sbjct: 195 IVAGLPPAIVKTIEQSRQGEIHFLVLLFIAILVFSVI-FFVIFVERGQRRIVVNY----- 248
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP LAS G
Sbjct: 249 AKRQQGRRIYATQSTHLPLKVNMAGVIPAIFASSIILFPVTLASWFGG 296
>gi|415715231|ref|ZP_11465785.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1400E]
gi|388058622|gb|EIK81410.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1400E]
Length = 446
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 162/337 (48%), Gaps = 25/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 264 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG-VFTIVTMWAVVVTEGCR 375
QG S++I + I +G+ L+++ G++ W F ++G V ++ ++ V R
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKF--SIVGCVLLVILIFVDFVELAQR 243
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDS 297
Query: 436 FWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFN 469
V+ I N + W +Y + FF F +
Sbjct: 298 RKDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT 333
>gi|428213124|ref|YP_007086268.1| protein translocase subunit SecY [Oscillatoria acuminata PCC 6304]
gi|428001505|gb|AFY82348.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
acuminata PCC 6304]
Length = 421
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 27/327 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDFGAELK 209
+ +R RL +T ++V+ R+G +IP+PG D + + + + GS +L G
Sbjct: 7 AGLRGRLLLTIGMLVLVRLGIWIPVPGIDL----ERFQANIDGSPLIGFLDLFSGGGLRA 62
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAV 268
L F LGI P I ASI+MQ+L +P+L L+K EG G KI Y +++LG+A+L+++
Sbjct: 63 LGIFALGIIPYINASIIMQLLTAALPTLEDLQKNEGEAGRRKISQYTRFVALGWALLQSI 122
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + ++ + +V TA L G+M + W+ + I+E G G G+SL+I V I+
Sbjct: 123 GISIWVGAFAETPDPGFLFYVQ-TAVALTTGSMFVMWVSELITERGVGNGASLLIFVNIV 181
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL----QYYGF 384
+L + +Q + P ++ L+ +F I + V V EG R++ + + G
Sbjct: 182 AVLPNSLGQTFAQAREDNTIVGPVLI-LMLIFLITIVGIVFVQEGTRRIPIISARRQVGR 240
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
KL RE S Y+P +N G+ P++ + +L P+ LA + + + L
Sbjct: 241 KL---YREKS------SYLPLRLNQGGVMPIIFASAVLILPASLAQFTQNNWLITISSYL 291
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P G P+VY Y + F+ F
Sbjct: 292 SPS---GRAPFVYAAFYLTLILFFSYF 315
>gi|434400523|ref|YP_007134527.1| protein translocase subunit secY/sec61 alpha [Stanieria
cyanosphaera PCC 7437]
gi|428271620|gb|AFZ37561.1| protein translocase subunit secY/sec61 alpha [Stanieria
cyanosphaera PCC 7437]
Length = 436
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 27/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 200
A E+F + + +R RL VT L+++ R+G FIP+PG DR + V G +D
Sbjct: 8 TAQETFLQMAQAAGLRGRLLVTIGLLILVRLGIFIPVPGIDRAKFAAGIQNLPVLGFLDI 67
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G L F LGI P I ASI+MQ+L +PSL L+K EG G KI +++
Sbjct: 68 FTGGGLS-ALGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVA 126
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
LG+AI++++ + L YA + + V+ T L G+M + W+ + I+E G G G+
Sbjct: 127 LGWAIIQSLGITIGLL--RPYATTPGIWFVVETVVALTAGSMFVMWVSELITERGIGNGA 184
Query: 320 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
SL+I V I+ +TL + + +Q G +L L+ + I+ + V V EG R++
Sbjct: 185 SLLIFVNIVAVLPKTLGQTIEFAQKGGREAVAQVVILLLVFLVMIIGI--VFVQEGTRRI 242
Query: 378 KLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+ SA R+ E Y+P +N G+ P++ + +L PS LA +G
Sbjct: 243 -------PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAGFVGGE 295
Query: 436 FWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF 471
V +I+N + ++ +P W Y Y + F+ F
Sbjct: 296 --GTVGQIVN-QIAIALQPGNWTYVAFYLLLIVFFSYF 330
>gi|117927535|ref|YP_872086.1| preprotein translocase subunit SecY [Acidothermus cellulolyticus
11B]
gi|117647998|gb|ABK52100.1| protein translocase subunit secY/sec61 alpha [Acidothermus
cellulolyticus 11B]
Length = 437
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 37/342 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR-------LIPQDYLSFVSGSVDEL 201
++F ++R++L +IV+ RIG IP PG + IPQ +G++ L
Sbjct: 7 QAFRTPDLRKKLLFVLFIIVLFRIGSAIPTPGVSSKNINTCLQQIPQGG----AGNIYTL 62
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA LKLS LGI P I +SI++Q+L ++P L +L++EG G +K+ Y ++
Sbjct: 63 INLFSGGALLKLSILALGIMPYITSSIIIQLLVVVIPRLERLKEEGASGQQKLTQYTRYL 122
Query: 259 SLGFAILE-AVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
++G A+L+ A VA P ++++ + S+ ++ ++ G + W+ + I
Sbjct: 123 TIGLAVLQSAAFVALARTPGAVFSGCSLPIIPNTSLGVIVTMVIIMTAGTGIIMWLGELI 182
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
++ G G G SL+I V I + L ++ + P +G+L V + V +
Sbjct: 183 TDRGIGNGMSLLIFVQIAARFPAELNQIRLN------KGLPTFIGVLVVGVAIITAIVFM 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+G R++ +QY + + YIP +N +G+ PV+ + LL PS+
Sbjct: 237 EQGQRRIPVQYAKRMVGRRMYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPSLAIQ 291
Query: 431 ILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ G F V L+P T+ Y+ + FF F +
Sbjct: 292 VWGPTKHPAFANFVNTYLSPSTAHPTYLLAYFVLIIFFTFFY 333
>gi|311111952|ref|YP_003983174.1| preprotein translocase subunit SecY [Rothia dentocariosa ATCC
17931]
gi|310943446|gb|ADP39740.1| preprotein translocase subunit SecY [Rothia dentocariosa ATCC
17931]
Length = 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF--GAELK 209
+++RR+L T +IV+ R+G FIP PG + Q + G+ D + F GA L+
Sbjct: 12 ADLRRKLLFTLGMIVLYRMGTFIPAPGISYGTVQQCLNANQTHGGAYDIINLFSGGALLQ 71
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 270 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ + + V H++V L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILVIIITLCAGTGVIMWMGEQITERGVGNGMSLLI 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYY 382
I + + L +L Q G V W ++GL M AVV V + R+V +QY
Sbjct: 192 FTSIASSFPNALGSILEQ-QGPFVFWSVCLVGL------AVMLAVVYVEQSVRRVPVQY- 243
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A I YIP +N +G+ P++ + LL P I+A
Sbjct: 244 ----AKRMIGRRTIGGTSTYIPLKVNMAGVIPIIFASSLLTLPGIIAQ 287
>gi|300742038|ref|ZP_07072059.1| preprotein translocase, SecY subunit [Rothia dentocariosa M567]
gi|300381223|gb|EFJ77785.1| preprotein translocase, SecY subunit [Rothia dentocariosa M567]
Length = 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF--GAELK 209
+++RR+L T +IV+ R+G FIP PG + Q + G+ D + F GA L+
Sbjct: 12 ADLRRKLLFTLGMIVLYRMGTFIPAPGISYGTVQQCLNANQTHGGAYDIINLFSGGALLQ 71
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 270 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ + + V H++V L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILVIIITLCAGTGVIMWMGEQITERGVGNGMSLLI 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYY 382
I + + L +L Q G V W ++GL M AVV V + R+V +QY
Sbjct: 192 FTSIASSFPNALGSILEQ-QGPFVFWSVCLVGL------AVMLAVVYVEQSVRRVPVQY- 243
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A I YIP +N +G+ P++ + LL P I+A
Sbjct: 244 ----AKRMIGRRTIGGTSTYIPLKVNMAGVIPIIFASSLLTLPGIIAQ 287
>gi|282899970|ref|ZP_06307931.1| SecY protein [Cylindrospermopsis raciborskii CS-505]
gi|281195240|gb|EFA70176.1| SecY protein [Cylindrospermopsis raciborskii CS-505]
Length = 437
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 172/342 (50%), Gaps = 37/342 (10%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
A E+F + + +R RL VT ++++ R+G F+P+PG +R + + +SG+ G
Sbjct: 10 AQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----ERFAEAISGNNAIFG 65
Query: 203 DF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 66 LLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++SLG+ IL++ A +L +A + V TA L G+M + W + I+E G G
Sbjct: 126 YVSLGWGILQST--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I V I+ ++L L Q+ G + +L L+ V TI+ + V V EG
Sbjct: 184 NGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFVATIIGI--VFVQEGI 241
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 242 RRI-------PIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLIAN-- 292
Query: 433 GSPFWQHVK--EILNPETS-VGARPWVYYTIYAFFVFLFNIF 471
F ++V+ I+N S G+ WVY +Y + F+ F
Sbjct: 293 ---FTKNVELANIVNTYLSPSGSSSWVYALVYMVSIIFFSYF 331
>gi|73661992|ref|YP_300773.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494507|dbj|BAE17828.1| preprotein translocase SecY subunit [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 25/330 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
SFFK+ E+R ++F T ++VI +IG +IP PG + S G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSQQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDAGRKKLNNVTRYFAIVLAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y S+ ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGQLIMDQSILSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + Q +S+ W + ++G+ ++T+ A+ V + RK+ +
Sbjct: 185 FAGILSSLPSSLIQFYQQAFVGQDDTSMAWLKVIALIIGMI-LLTVGAIYVLQAIRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDASWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-----YAF 463
V ++ NP ++G +V I YAF
Sbjct: 298 KVSDVANPSNNIGMIVYVVLIIAFTYFYAF 327
>gi|123969279|ref|YP_001010137.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
AS9601]
gi|123199389|gb|ABM71030.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
AS9601]
Length = 439
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 172/355 (48%), Gaps = 40/355 (11%)
Query: 134 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 193
F+N R S ++ F E+R R+ T L+++ R+G +IP+P DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPSIDRV----AFKSF 57
Query: 194 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 247
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPFLEDLQKNEGEAG 117
Query: 248 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 307
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILRQYAIEGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 359
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 360 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 416
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGNTTLLPTRQSYLPLKLNAGGVMPII 281
Query: 417 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+ P +A++ G+P + LNP +S PW Y + + F+ F
Sbjct: 282 FASALIFLPITIANVTGNPVLIKLASSLNPGSS---NPWPYALTFFSLILGFSYF 333
>gi|373853730|ref|ZP_09596529.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV5]
gi|391228141|ref|ZP_10264348.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV1]
gi|372473257|gb|EHP33268.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV5]
gi|391223634|gb|EIQ02054.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV1]
Length = 495
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 173/347 (49%), Gaps = 32/347 (9%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A S E+R R+F T L+ I+R+G IPLPG D R + +++L G +G +
Sbjct: 6 ANSLKIPELRSRIFYTLALLFIARVGAHIPLPGLDPRPL-EEFLKGAMGDGGAMGLYNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA LK + LGI P I ASI+ Q++ +VP L +L++EG G +KI Y + ++
Sbjct: 65 TGGALLKGAVCALGIMPYISASIIFQLMTAVVPGLARLQQEGDVGRQKIAQYTRYATVLI 124
Query: 263 AILE-AVIVACYSLP-----YSIYAASHSVKHVMVT--------AFLLVCGAMTMSWICD 308
+++ A+++ P + Y + + V+++ + G M ++W+ +
Sbjct: 125 CVVQGALLILALENPNKLPGFGGYDVNVHGQIVVISHTWFLVSGVIFMTAGTMLLTWLGE 184
Query: 309 TISESGFGQGSSLIICVGILT---GYTETLYKMLSQLLGS-SVRWWPFMLGLLGVFTIVT 364
I++ G G G SL+I VGIL+ G TL+ +L +G+ + + F+ ++ +F VT
Sbjct: 185 QITQRGIGNGISLLITVGILSDIPGAMTTLWTLLRAPVGTPGISYLSFLFMVI-LFFAVT 243
Query: 365 MWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
M ++V +G RK+ +QY A + + ++P +N SG+ PV+ + +L F
Sbjct: 244 MGIIMVVQGQRKIPVQY-----AKRVVGNKVMGGQNSFLPLKVNYSGVMPVIFASAILLF 298
Query: 425 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P + S LG + ++ ++ VYY A + F+ F
Sbjct: 299 PQQIFSYLGVAI--DMPSLVEFSQNLSRGHPVYYVTMALLILFFSYF 343
>gi|15603260|ref|NP_246334.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12721770|gb|AAK03479.1| SecY [Pasteurella multocida subsp. multocida str. Pm70]
Length = 441
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 22/322 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ Q +D F GA + S F L
Sbjct: 22 RLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRASIFAL 80
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV ++ L
Sbjct: 81 GIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATLQAVGIST-GL 139
Query: 276 PYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + +V + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 140 PNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPS 199
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
+ + + Q + +L + VF VT + V V G R++K++Y A +
Sbjct: 200 AIGQTIEQTRQGQMHLLVLLLIAVIVFA-VTYFVVFVERGQRRIKVEY-----AKRQQGR 253
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPETS 449
+ ++P +N +G+ P + + ++ FP+ LA LG + + +L+P
Sbjct: 254 QILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHP--- 310
Query: 450 VGARPWVYYTIYAFFVFLFNIF 471
+P +Y +YA + F+ F
Sbjct: 311 --GQP-LYLLVYAVAIIFFSFF 329
>gi|375086482|ref|ZP_09732889.1| preprotein translocase, SecY subunit [Megamonas funiformis YIT
11815]
gi|374564827|gb|EHR36107.1| preprotein translocase, SecY subunit [Megamonas funiformis YIT
11815]
Length = 418
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 23/296 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E+R+++ T ++ + R+G IP+PG + +I Q F SG++ L D GA K
Sbjct: 12 TELRQKIVFTLIMFAVFRLGTHIPVPGVNPSVIEQ---LFNSGNLFGLLDLFSGGALSKF 68
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F + I+P I ASI++Q+L +VP+L Q KEG +GH+KI ++++ A L+A+
Sbjct: 69 SLFAMSITPYINASIIIQLLTVVVPTLEQWSKEGEEGHKKITKTTRYLTVVLAFLQAI-- 126
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
S+ + S+ +++ A L G + + WI + I+ G G G SLII GI+
Sbjct: 127 -GMSIGLKQAIINPSITSILIIAITLTAGTVFLMWIGEQITAHGVGNGISLIIFAGIVAA 185
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 386
+ L + + L ++ ++ + F I+ + +V + +G R+V + Y
Sbjct: 186 LPQNLGTIYNYLQAGTISYFNVLF-----FAIIALAMIVFVIAIQQGQRRVPVSY----- 235
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
A +IP +N +G+ P++ + +L FP+ LA + +P+ + + +
Sbjct: 236 AKRVVGRKTYGGQSTHIPLKVNQAGVIPIIFASSVLMFPATLAQFVQTPWIKTIAD 291
>gi|229815752|ref|ZP_04446077.1| hypothetical protein COLINT_02801 [Collinsella intestinalis DSM
13280]
gi|229808668|gb|EEP44445.1| hypothetical protein COLINT_02801 [Collinsella intestinalis DSM
13280]
Length = 428
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 38/316 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----FVSGSV 198
+L +F E+R ++ T ++V+ RIG +P+PG + + + S F SG++
Sbjct: 1 MLTGLKNTFRIKELRGKILFTIAMLVVYRIGAHVPVPGIPFQAMSGLFQSAGDTFASGAM 60
Query: 199 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L F GA +S F LGI P I +SI+MQ+L +VPSL +L +EG G KI Y
Sbjct: 61 ALLNLFSGGALSYVSVFSLGIMPYITSSIIMQMLQAVVPSLHELAREGEVGQTKITQYSR 120
Query: 257 WISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++LG A+L +V + + + ++ A + +M+ L GAM + WI + I++
Sbjct: 121 YLTLGLALLNSVGYLFLFKSFGIQFNGAGAPEIIFDIMIVG-TLTAGAMLIMWIGELITQ 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV--- 369
G G G SLII I+ G + +++ + G +GV T + + V+
Sbjct: 180 RGIGNGMSLIIFANIMAGLPQAIFQSIEG-------------GNMGVITTLVILVVILCV 226
Query: 370 ------VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 423
+ G R++ +QY A + Y+P +N +G+ P++ + LL
Sbjct: 227 IPFIVYLERGQRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVIPIIFASALLY 281
Query: 424 FPSILASILGSPFWQH 439
FP+ LA + W
Sbjct: 282 FPAQLAVFFPNVGWMQ 297
>gi|149199523|ref|ZP_01876558.1| protein translocase subunit SecY [Lentisphaera araneosa HTCC2155]
gi|149137458|gb|EDM25876.1| protein translocase subunit SecY [Lentisphaera araneosa HTCC2155]
Length = 453
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 153/306 (50%), Gaps = 27/306 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF------G 205
++R++L T +IV+ R+ +P+PG D ++ DY+ S S ++L G
Sbjct: 12 QDLRKKLLYTVWVIVLVRVLKNVPIPGIDLNVLADLMDYVKNQSESANKLVGMANVFSGG 71
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF-AI 264
A KL+ LGI P I ASI+MQ++ + P+L +L+K+G G +K+ Y ++++ A+
Sbjct: 72 ALQKLAIGVLGIMPYITASIIMQLMTPVFPNLEKLQKDGSHGRQKLNQYTRYMTIVICAV 131
Query: 265 LEAVIVACYSLPYSIYAA--------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
A++ P + + V+ T ++ A+ + W+ + I++ G G
Sbjct: 132 QSAMMAVAMHTPSKLLGVPGFEDLVINKGSAFVIQTTIIVTASAILIMWLGEQITDKGLG 191
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF--MLGLLGVFTIVTMWAVVVTEGC 374
G+S+II + +L+ + + S+ W +L ++G+ IVT V + +G
Sbjct: 192 NGASIIITINVLSSMPQAFAAVYSKYQEGE---WNLVQILVVVGILFIVTAATVALVQGM 248
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ L+Y A A + + E Y+P +N +G+ P++ + L+ FP ++ + +G
Sbjct: 249 RKIPLKY-----ARDASSRNAMIEKTSYLPLKVNHAGVMPIIFASALMMFPPMIINKIGG 303
Query: 435 PFWQHV 440
F + V
Sbjct: 304 DFARTV 309
>gi|365174477|ref|ZP_09361925.1| preprotein translocase, SecY subunit [Synergistes sp. 3_1_syn1]
gi|363615033|gb|EHL66505.1| preprotein translocase, SecY subunit [Synergistes sp. 3_1_syn1]
Length = 431
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 168/332 (50%), Gaps = 20/332 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ ++F +++RR+ T + + R+G +P PG D + + F G++
Sbjct: 1 MLDSFRDTFRLPDLKRRILFTLAALFVYRLGAHVPTPGVDAAALGK---LFDQGTLLGFL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA + S F LG++P I +SI+MQ+L +VPS+ +++KEG +G +KI + + +
Sbjct: 58 DLFAGGALSRFSIFALGVTPYINSSIVMQLLAVVVPSIEKMQKEGEEGRKKIVQWTRYGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ FA ++AV + + IY S + +++ + L GA+ + W+ + +S+ G G G
Sbjct: 118 IVFAFIQAVGMTGWLRGLGIY--SGGMLDIILVSLTLTTGAVAVMWLGEIMSDHGIGNGI 175
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I GI+ E + + +S + + +L ++ + V V++ EG R++ +
Sbjct: 176 SLLIFAGIVVRIPEAIIRTVSLVRLGEMNVLVMLLAII-IMVAVIAGCVMLQEGQRRLPV 234
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY A + +IP +N +G+ P++ + +L FP +A + +
Sbjct: 235 QY-----AKRMVGNKMYGGQSSFIPLRVNTAGVIPIIFASSVLLFPYTIAGLFQHSIARM 289
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+++ ++P + +Y +Y + F+ F
Sbjct: 290 IQQAMSPSSP------IYMILYVLMIIFFSYF 315
>gi|416893397|ref|ZP_11924585.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
ATCC 33389]
gi|347813951|gb|EGY30603.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
ATCC 33389]
Length = 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 157/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++RRL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKRRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + VF VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHVLVLLLIAVIVFA-VTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWGGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYAAAIIFFSFF 329
>gi|163745564|ref|ZP_02152924.1| protein translocase subunit SecY [Oceanibulbus indolifex HEL-45]
gi|161382382|gb|EDQ06791.1| protein translocase subunit SecY [Oceanibulbus indolifex HEL-45]
Length = 460
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 36/314 (11%)
Query: 140 LSSVLNNAAESFFKS-----EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV 194
+S+V N AA + + + ++R R+ T L+++ R+G FIP+PG D + +D++
Sbjct: 2 VSAVENMAANTSWAALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGGAL-RDFMESA 60
Query: 195 S---GSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKI 251
G + + GA ++ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI
Sbjct: 61 GQGIGGMVSMFTGGALGRMGIFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKI 120
Query: 252 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC------GAMTMSW 305
Y + ++ A L++ Y L S+ A M F+ C G M + W
Sbjct: 121 NQYTRYGTVALATLQS-----YGLAVSLQAGDIVADGQMGFGFIAACMITLVGGTMFLMW 175
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVT 364
+ + I+ G G G SLII VGI+ + + + G S P ++G+L +
Sbjct: 176 LGEQITARGIGNGISLIIFVGIIAEVPAAIAQFFAS--GRSGAISPAVIIGVLVMVIATI 233
Query: 365 MWAVVVTEGCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
M+ V + RK+ +QY G K+ ++P +NP+G+ P + +
Sbjct: 234 MFVVFMERALRKIHIQYPRRQVGMKMYDGGTS---------HLPVKVNPAGVIPAIFASS 284
Query: 421 LLAFPSILASILGS 434
LL P +++ G+
Sbjct: 285 LLLLPVTVSTFSGN 298
>gi|302782363|ref|XP_002972955.1| hypothetical protein SELMODRAFT_98540 [Selaginella moellendorffii]
gi|300159556|gb|EFJ26176.1| hypothetical protein SELMODRAFT_98540 [Selaginella moellendorffii]
Length = 424
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 38/331 (11%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------ 204
FF+ ++ + + + +SR+G +IPLPG DR + SGS+ + F
Sbjct: 13 FFRGKLPGKFLLLLGWLALSRVGTYIPLPGVDR--------AAFSGSMTDNSLFRTLDAF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A IL Q+L + P L +L +KEG G +K+ Y + S+
Sbjct: 65 SGGGIGRLGVCSLGIVPFINAQILFQLLGSLFPELERLQKKEGEAGRKKVLQYTRYASVA 124
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI +A+ Y PY A S+ + + LL GA+ S+I + IS+ G G+SL
Sbjct: 125 FAIFQAIGQVLYIRPY---ADDFSLGWIFTSISLLTIGAVLTSYIGERISDIKLGNGTSL 181
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQ 380
+I I++ ++ + + Q L + LG +G+ F ++ + V V E R++ L
Sbjct: 182 LIFTNIISSLPASVGRTIDQALKDANYAG---LGTIGLSFFLLVLGIVYVQESERRIPLN 238
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y A+R + + Y+PF IN SG+ P++ +T LA S +A G+ + ++
Sbjct: 239 Y-------ASRYSGGLQK-SAYLPFKINSSGVMPIIFSTSALALTSSVARFSGATGFNNI 290
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP S Y A + FN F
Sbjct: 291 VATLNPGGS------FYLPTNAVLIAFFNYF 315
>gi|260427858|ref|ZP_05781837.1| preprotein translocase, SecY subunit [Citreicella sp. SE45]
gi|260422350|gb|EEX15601.1| preprotein translocase, SecY subunit [Citreicella sp. SE45]
Length = 448
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 31/290 (10%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+++R R+ T L+++ R+G +IP+PG D R + Q G + + GA +
Sbjct: 14 TDLRNRILFTLGLLIVYRLGTYIPVPGIDGAALRNFMEQAGQGI--GGMVSMFTGGALGR 71
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q+L +VP L QL+KEG G +KI Y + ++ A+ +A
Sbjct: 72 MGIFALGIMPYISASIIVQLLAAMVPFLEQLKKEGEQGRKKINQYTRYGTVALALFQA-- 129
Query: 270 VACYSLPYSIYAA--SHSVKHVMVTAFL--LVCGAMTMSWICDTISESGFGQGSSLIICV 325
Y L S+ A +H A + LV G M + W+ + I+ G G G SLII V
Sbjct: 130 ---YGLAVSLEAGDLAHDPGWYFRAAVVITLVGGTMFLMWLGEQITARGIGNGISLIIFV 186
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 381
GI+ L + + G S P +LG + + +V M+ V + RK+ +QY
Sbjct: 187 GIVAEIPAALAQFFAS--GRSGAISPAIILGAIVMVVLVIMFVVFMERALRKITIQYPRR 244
Query: 382 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G K+ A + ++P +NP+G+ P + + LL P+ +A+
Sbjct: 245 QVGMKMTEAQ---------QSHLPVKVNPAGVIPAIFASSLLLLPTTIAT 285
>gi|425064108|ref|ZP_18467233.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida X73]
gi|404381701|gb|EJZ78169.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida X73]
Length = 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 22/322 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ Q +D F GA + S F L
Sbjct: 22 RLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIFAL 80
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV ++ L
Sbjct: 81 GIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATLQAVGIST-GL 139
Query: 276 PYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + +V + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 140 PNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPS 199
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
+ + + Q + +L + VF VT + V V G R++K++Y A +
Sbjct: 200 AIGQTIEQTRQGQMHLLVLLLIAIIVFA-VTYFVVFVERGQRRIKVEY-----AKRQQGR 253
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPETS 449
+ ++P +N +G+ P + + ++ FP+ LA LG + + +L+P
Sbjct: 254 QILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHP--- 310
Query: 450 VGARPWVYYTIYAFFVFLFNIF 471
+P +Y +YA + F+ F
Sbjct: 311 --GQP-LYLLVYAVAIIFFSFF 329
>gi|378775245|ref|YP_005177488.1| Preprotein translocase subunit SecY [Pasteurella multocida 36950]
gi|383311241|ref|YP_005364051.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. HN06]
gi|386835261|ref|YP_006240578.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. 3480]
gi|417851419|ref|ZP_12497164.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|417854184|ref|ZP_12499506.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|421264144|ref|ZP_15715149.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425066277|ref|ZP_18469397.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida P1059]
gi|338218368|gb|EGP04141.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219491|gb|EGP05140.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|356597793|gb|AET16519.1| Preprotein translocase subunit SecY [Pasteurella multocida 36950]
gi|380872513|gb|AFF24880.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201964|gb|AFI46819.1| preprotein translocase, SecY subunit [Pasteurella multocida subsp.
multocida str. 3480]
gi|401688609|gb|EJS84172.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404381862|gb|EJZ78327.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida P1059]
Length = 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 22/322 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ Q +D F GA + S F L
Sbjct: 22 RLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIFAL 80
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV ++ L
Sbjct: 81 GIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATLQAVGIST-GL 139
Query: 276 PYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + +V + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 140 PNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPS 199
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
+ + + Q + +L + VF VT + V V G R++K++Y A +
Sbjct: 200 AIGQTIEQTRQGQMHLLVLLLIAVIVFA-VTYFVVFVERGQRRIKVEY-----AKRQQGR 253
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPETS 449
+ ++P +N +G+ P + + ++ FP+ LA LG + + +L+P
Sbjct: 254 QILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHP--- 310
Query: 450 VGARPWVYYTIYAFFVFLFNIF 471
+P +Y +YA + F+ F
Sbjct: 311 --GQP-LYLLVYAVAIIFFSFF 329
>gi|68249394|ref|YP_248506.1| preprotein translocase subunit SecY [Haemophilus influenzae
86-028NP]
gi|68057593|gb|AAX87846.1| preprotein translocase SecY subunit [Haemophilus influenzae
86-028NP]
Length = 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDATVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|427732031|ref|YP_007078268.1| protein translocase subunit SecY [Nostoc sp. PCC 7524]
gi|427367950|gb|AFY50671.1| protein translocase subunit secY/sec61 alpha [Nostoc sp. PCC 7524]
Length = 437
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 169/341 (49%), Gaps = 33/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R RL VT ++++ R+G F+P+PG DR + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDR----TRFAEAISGNNSIF 64
Query: 202 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGIFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
+++LG+ I+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVALGWGIVQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 316 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFMLTIVGI--VFVQEG 240
Query: 374 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
R++ + SA R+ + E Y+P + G+ P++ +L+ P ++A+
Sbjct: 241 LRRI-------PIISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANF 293
Query: 432 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + V L+P G+ WVY +Y + F+ F
Sbjct: 294 TKNPELANIVNTYLSPG---GSGSWVYALVYLISIVFFSYF 331
>gi|423351607|ref|ZP_17329238.1| preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
gi|404386327|gb|EJZ81490.1| preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
Length = 442
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 40/345 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF-- 204
+ F +++RR++ T LI++ RIG IP PG D I + LS GSV L +
Sbjct: 6 QVFKDADLRRKILFTLGLIILYRIGAQIPAPGVDYTQISGRLEELSEDQGSVYSLINLFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ++I++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 66 GGALLQLSVFAIGIMPYITSAIIVQLLTVVIPKFEQLKKEGQSGQAKMTQYTRYLTVALA 125
Query: 264 ILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ IVA + ++ +++ +L GA+ + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADRQQLLGPGVEVLDPDRTIWDLIMLTLVLTSGAVLIMWLGELITEKGVG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 375
G SL+I GI T ++L+ G + G++ V I + VV V +G R
Sbjct: 186 NGMSLLIFAGIATRLPTDGVQILNNSGG-------LVFGIILVAVIALVVGVVFVEQGQR 238
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 239 RIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITEIVNSG 293
Query: 436 -------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ+ + + P + WVY IY V F+ F
Sbjct: 294 RTTPPDNWWQNNVIAYLQTPSS------WVYILIYFVLVIFFSYF 332
>gi|379058880|ref|ZP_09849406.1| protein translocase subunit secY/sec61 alpha [Serinicoccus profundi
MCCC 1A05965]
Length = 441
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 167/344 (48%), Gaps = 34/344 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDELGDF--- 204
+F ++R+++ T ++ + R+G IP PG D L+ Q + +SG+V + +
Sbjct: 7 RAFKTPDLRKKILFTLAIMALYRLGTHIPTPGVDYGLVQQCLNTAELSGNVLGMVNLFSG 66
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA ++LS F LGI P I A+I++Q+L ++P QL+KEG G K+ Y ++++G A+
Sbjct: 67 GAMVQLSVFALGIMPYITAAIIVQLLTVVIPRFEQLKKEGQAGQTKMTQYTRYLTIGLAV 126
Query: 265 LEA-VIVACYSLPYSIYAAS-------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
L+A +V P ++ + + + + ++ G + W+ + I+E G G
Sbjct: 127 LQASTLVTIAREPARLFGTTCTSVMPDDGIWTLSLMVLVMTAGTGLIMWMGELITEKGVG 186
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-R 375
G SL+I + I G+ L + SSV + ++ LLG +V M VV E C R
Sbjct: 187 NGMSLLIFISIAAGFPAA----LGAIYQSSVTTFVLVM-LLG---LVIMTLVVYVEQCQR 238
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI---- 431
++ +QY K R+ + YIP +N + + P++ + +L PS+LA+
Sbjct: 239 RIPVQYA--KRMVGRRQYGGTST---YIPLKLNMANVIPIIFASSILMLPSLLANFNRPT 293
Query: 432 ---LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P W + L+ + WVY +YA + F F
Sbjct: 294 EAGATAPGWVSFIDRYLSMGATGSGTHWVYMVLYAAMIIFFCFF 337
>gi|261854970|ref|YP_003262253.1| preprotein translocase subunit SecY [Halothiobacillus neapolitanus
c2]
gi|261835439|gb|ACX95206.1| preprotein translocase, SecY subunit [Halothiobacillus neapolitanus
c2]
Length = 444
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 162/333 (48%), Gaps = 32/333 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R+R+F +++V+ RIG FIPLPG D ++ + G + + F GA ++S
Sbjct: 18 TELRQRIFFVIMVLVVYRIGTFIPLPGIDVDVMRTLFTQHSGGILGMMNMFSGGALSRMS 77
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LG+ P I ASI++Q+L ++PSL +++KEG G KI Y + +LG +++A+ V+
Sbjct: 78 LFALGVMPYISASIIVQLLSSVLPSLERIKKEGEAGRRKITQYTRYGTLGLGLVQALGVS 137
Query: 272 CYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
S+ S + V L+ G M + W+ + I+E G G G SLII GI
Sbjct: 138 IALQGQSVGGQSLVYTPGFGFLFVATMTLLTGTMLLVWLGEQITERGVGNGISLIIFAGI 197
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT---------EGCRKVK 378
+ G L +G + G LGV T++ + ++V G R++
Sbjct: 198 VAG--------LPTAIGGTAEL--VRTGELGVITLLILAVLIVAVTAFVVFVERGQRRIT 247
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+ Y A + + ++P +N +G+ P + + ++ FP+ L + LG +
Sbjct: 248 VNY-----ARRQQGRGMAGQQSSHLPLKLNMAGVIPPIFASSIILFPATLGNWLGQQ--E 300
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++ + + T++ +Y +YA + F F
Sbjct: 301 NMAWLRSVSTALSPGQPLYVGLYATAIIFFCFF 333
>gi|52426083|ref|YP_089220.1| preprotein translocase subunit SecY [Mannheimia succiniciproducens
MBEL55E]
gi|52308135|gb|AAU38635.1| SecY protein [Mannheimia succiniciproducens MBEL55E]
Length = 441
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV R+G FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RVGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + +LG A L+A+ +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVYPALNELRKEGESGRRKISKYTRYATLGLATLQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + VF VT + V G R++K++Y A
Sbjct: 195 AGLPSAIGQTIEQARQGQMHLLVLLLIAVIVFA-VTYFVVFFERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWFGEGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLIVYAIAIIFFSFF 329
>gi|163783354|ref|ZP_02178347.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]
gi|159881462|gb|EDP74973.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]
Length = 431
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 163/329 (49%), Gaps = 20/329 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 208
F ++RRR T + I R+G IP+PG D + +D+ + G++ L D G L
Sbjct: 9 FVFEDLRRRFLYTLFMFAIYRLGSHIPIPGVDVVAL-EDFFKAMQGTLFNLYDIFSGGNL 67
Query: 209 -KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILE 266
+++ F LG+ P I ASI+MQ+L +P L +L KE D G KI Y +++L A ++
Sbjct: 68 SRMTVFALGVMPYISASIMMQLLTVAIPELQRLAKEEGDYGRYKINEYTKYLTLFVAFVQ 127
Query: 267 AVIVACY----SLPYSIYAASHS-VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
++ +A + + P + + V+ LV G M + W+ + I+E G G G SL
Sbjct: 128 SIGIAFWLQNQTSPRGFPVVPEAGFLFIFVSVMTLVAGTMFLVWMGERITEKGIGNGMSL 187
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVVTEGCRKVKLQ 380
+I GI+ G+ + ++ +L S PF + G + + +V + V + E R++ +Q
Sbjct: 188 LIFAGIVAGFPNAVISLVDRL--RSGDLAPFAVAGAVVMVLLVIVGIVYIQEAERRIPVQ 245
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y R++ Y+P INP+G+ P++ LL PS + + + P Q +
Sbjct: 246 Y---PRRVVGRQEY--RGGSTYLPIKINPAGVIPIIFAQSLLIIPSSVLTFIQHPIAQVI 300
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFN 469
+ NP TS+ ++Y + FF + +
Sbjct: 301 YDAFNP-TSIFYN-FLYVMLIVFFTYFYT 327
>gi|395238099|ref|ZP_10416078.1| Preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
gi|394486535|emb|CCI84166.1| Preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
Length = 448
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 40/345 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF-- 204
+ F +++RR++ T LI++ RIG IP PG D I + LS GSV L +
Sbjct: 12 QVFKDADLRRKILFTLGLIILYRIGAQIPAPGVDYTQISGRLEELSEDQGSVYSLINLFS 71
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ++I++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 72 GGALLQLSVFAIGIMPYITSAIIVQLLTVVIPKFEQLKKEGQSGQAKMTQYTRYLTVALA 131
Query: 264 ILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ IVA + ++ +++ +L GA+ + W+ + I+E G G
Sbjct: 132 LLQSSGIVALADRQQLLGPGVEVLDPDRTIWDLIMLTLVLTSGAVLIMWLGELITEKGVG 191
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 375
G SL+I GI T ++L+ G + G++ V I + VV V +G R
Sbjct: 192 NGMSLLIFAGIATRLPTDGVQILNNSGG-------LVFGIILVAVIALVVGVVFVEQGQR 244
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 245 RIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITEIVNSG 299
Query: 436 -------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ+ + + P + WVY IY V F+ F
Sbjct: 300 RTTPPDNWWQNNVIAYLQTPSS------WVYILIYFVLVIFFSYF 338
>gi|329122804|ref|ZP_08251376.1| preprotein translocase subunit SecY [Haemophilus aegyptius ATCC
11116]
gi|327472068|gb|EGF17506.1| preprotein translocase subunit SecY [Haemophilus aegyptius ATCC
11116]
Length = 441
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|145636644|ref|ZP_01792311.1| preprotein translocase subunit SecY [Haemophilus influenzae PittHH]
gi|145270170|gb|EDK10106.1| preprotein translocase subunit SecY [Haemophilus influenzae PittHH]
Length = 436
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|325577147|ref|ZP_08147631.1| preprotein translocase subunit SecY [Haemophilus parainfluenzae
ATCC 33392]
gi|345429289|ref|YP_004822407.1| preprotein translocase membrane subunit [Haemophilus parainfluenzae
T3T1]
gi|419802889|ref|ZP_14328069.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK262]
gi|419845516|ref|ZP_14368783.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK2019]
gi|301155350|emb|CBW14816.1| preprotein translocase membrane subunit [Haemophilus parainfluenzae
T3T1]
gi|325160729|gb|EGC72850.1| preprotein translocase subunit SecY [Haemophilus parainfluenzae
ATCC 33392]
gi|385189129|gb|EIF36598.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK262]
gi|386415384|gb|EIJ29916.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK2019]
Length = 441
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 29/330 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E++ RL +++ RIG FIPLPG D ++ Q +D L F GA + S
Sbjct: 17 GELKSRLLFVLGALIVYRIGSFIPLPGIDAAVLAQLVEQQKGTIIDMLNMFSGGALSRAS 76
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
LGI P I ASI+MQ+L + P+L +L+KEG G KI Y + ++ FA ++A+ ++
Sbjct: 77 ILALGIMPYISASIVMQLLATVSPALAELKKEGAAGQRKITKYTRYATVVFATIQAIAIS 136
Query: 272 CYSLPYSIYAASHSVKHVMVTAFL-----LVCGAMTMSWICDTISESGFGQGSSLIICVG 326
LP + V ++ T + LV G M + W+ + I+E G G G S+++ G
Sbjct: 137 T-GLPNML---PQLVPNIGFTFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILVFGG 192
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFK 385
I+ G + + + Q + P +L L+ VT + V V G R+++++Y
Sbjct: 193 IVAGLPHAIIETVEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY---- 246
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVK 441
A + + ++P +N + + P + + ++ FP+ L G + +
Sbjct: 247 -AKRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNDLS 305
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+LNP +P +Y +YA + F+ F
Sbjct: 306 MLLNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|220906737|ref|YP_002482048.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7425]
gi|219863348|gb|ACL43687.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7425]
Length = 436
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 25/336 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 200
A E+F + + +R RL VT L+++ R+G ++P+PG DR++ Q + V G +D
Sbjct: 10 TAQETFAQMAQAAGLRGRLLVTIGLLILVRLGIYLPVPGIDRQVFAQTIQNNPVIGFLDI 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G L F LGI P I ASI++Q+L +PSL +L+K EG G KI +++
Sbjct: 70 FSGGGLS-ALGIFALGILPYINASIILQLLTAALPSLERLQKDEGEAGRRKISQITRYVA 128
Query: 260 LGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
L +AI+++ +A + S P +++ MV A L G+M + W+ + I+E G G
Sbjct: 129 LVWAIIQSTGIAIWVSSTPGAVFNPGPIFIGEMVLA--LTAGSMFVMWVSELITERGVGN 186
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G+SL+I + I+ ++ + + +L L VF + + V V EG R++
Sbjct: 187 GASLLIFLSIVAYLPTSINQTIELAQSGGSVGGVVILAL--VFLAMIVGIVFVQEGTRRI 244
Query: 378 KLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+ SA R+ E Y+P +N G+ P++ + +L PS LA +
Sbjct: 245 -------PIISARRQVGRRLYREQTSYLPLRLNQGGVMPIIFASAVLVLPSYLAGFTKN- 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V +I N T G PW+Y Y + F+ F
Sbjct: 297 --ETVAQIANYITPNGPTPWLYVLFYLVLILFFSYF 330
>gi|16272739|ref|NP_438957.1| preprotein translocase subunit SecY [Haemophilus influenzae Rd
KW20]
gi|145630544|ref|ZP_01786324.1| preprotein translocase subunit SecY [Haemophilus influenzae R3021]
gi|145632156|ref|ZP_01787891.1| preprotein translocase subunit SecY [Haemophilus influenzae 3655]
gi|145634791|ref|ZP_01790499.1| preprotein translocase subunit SecY [Haemophilus influenzae PittAA]
gi|145638401|ref|ZP_01794011.1| preprotein translocase subunit SecY [Haemophilus influenzae PittII]
gi|148826558|ref|YP_001291311.1| preprotein translocase subunit SecY [Haemophilus influenzae PittEE]
gi|148827987|ref|YP_001292740.1| preprotein translocase subunit SecY [Haemophilus influenzae PittGG]
gi|229845848|ref|ZP_04465960.1| preprotein translocase subunit SecY [Haemophilus influenzae 7P49H1]
gi|260579889|ref|ZP_05847719.1| preprotein translocase, SecY subunit [Haemophilus influenzae RdAW]
gi|260581615|ref|ZP_05849412.1| preprotein translocase, SecY subunit [Haemophilus influenzae NT127]
gi|319775268|ref|YP_004137756.1| preprotein translocase subunit SecY [Haemophilus influenzae F3047]
gi|319897708|ref|YP_004135905.1| preprotein translocase secy subunit [Haemophilus influenzae F3031]
gi|378696998|ref|YP_005178956.1| preprotein translocase membrane subunit [Haemophilus influenzae
10810]
gi|386266475|ref|YP_005829967.1| Protein translocase subunit SecY [Haemophilus influenzae R2846]
gi|1173419|sp|P43804.1|SECY_HAEIN RecName: Full=Protein translocase subunit SecY
gi|1573808|gb|AAC22456.1| preprotein translocase SecY subunit (secY) [Haemophilus influenzae
Rd KW20]
gi|144983934|gb|EDJ91376.1| preprotein translocase subunit SecY [Haemophilus influenzae R3021]
gi|144987063|gb|EDJ93593.1| preprotein translocase subunit SecY [Haemophilus influenzae 3655]
gi|145267957|gb|EDK07953.1| preprotein translocase subunit SecY [Haemophilus influenzae PittAA]
gi|145272730|gb|EDK12637.1| preprotein translocase subunit SecY [Haemophilus influenzae PittII]
gi|148716718|gb|ABQ98928.1| preprotein translocase subunit SecY [Haemophilus influenzae PittEE]
gi|148719229|gb|ABR00357.1| preprotein translocase subunit SecY [Haemophilus influenzae PittGG]
gi|229810852|gb|EEP46569.1| preprotein translocase subunit SecY [Haemophilus influenzae 7P49H1]
gi|260093173|gb|EEW77106.1| preprotein translocase, SecY subunit [Haemophilus influenzae RdAW]
gi|260095208|gb|EEW79099.1| preprotein translocase, SecY subunit [Haemophilus influenzae NT127]
gi|301169516|emb|CBW29117.1| preprotein translocase membrane subunit [Haemophilus influenzae
10810]
gi|309751541|gb|ADO81525.1| Protein translocase subunit SecY [Haemophilus influenzae R2866]
gi|309973711|gb|ADO96912.1| Protein translocase subunit SecY [Haemophilus influenzae R2846]
gi|317433214|emb|CBY81589.1| preprotein translocase SecY subunit [Haemophilus influenzae F3031]
gi|317449859|emb|CBY86070.1| preprotein translocase SecY subunit [Haemophilus influenzae F3047]
Length = 441
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|384251786|gb|EIE25263.1| pre protein translocase secY subunit [Coccomyxa subellipsoidea
C-169]
Length = 537
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 24/324 (7%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDELGDFGAEL 208
F K ++ +L + LIV SR+G ++ LPG D + S + G +D L G+
Sbjct: 126 DFLKGDLPGKLGIILALIVFSRVGVYMRLPGVDADRFAETVQSGGILGYIDALSG-GSIS 184
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L PSL +L R+EG G + + Y ++L A+++A
Sbjct: 185 RVGIFSLGIVPYINASIILQLLATTFPSLKKLQREEGPQGRARFQLYQKLLALAAAVIQA 244
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
V Y P + ++V + LV GAM + + D I+E G G+S++I I
Sbjct: 245 VGQLTYIRP---FVPEWDATWLVVNSLTLVAGAMVLVHVADMITELKLGNGTSILITANI 301
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ ++ + Q P + GL F + T+ V V E RK+ + Y
Sbjct: 302 ASALPASVGAAVQQAADKDSSSLP-IYGL--AFFLTTLGIVYVQEAERKIPMNY------ 352
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
A+R + + Y+PF +N +G+ PV+ ++ L++ P+ LA +P+ + V L P
Sbjct: 353 -ASRYRNSALSQQSYLPFKVNATGVMPVIFSSTLMSLPTGLARY--APWLEPVAAALGPT 409
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
+Y I + LFN +
Sbjct: 410 G------LLYLPINVLLIVLFNYY 427
>gi|354612852|ref|ZP_09030792.1| preprotein translocase, SecY subunit [Saccharomonospora
paurometabolica YIM 90007]
gi|353222816|gb|EHB87113.1| preprotein translocase, SecY subunit [Saccharomonospora
paurometabolica YIM 90007]
Length = 439
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 163/354 (46%), Gaps = 46/354 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDR------RLIPQDYLSFVSGSVDELGDFGAEL 208
++R+++ T +++ + R+G P PG + +D F S+ L GA L
Sbjct: 13 DLRKKILFTLMIVAVYRVGAVTPAPGVSYPNVQACQAQAEDQNIF---SLLNLFSGGALL 69
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++G AIL+A
Sbjct: 70 QLSVFATGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQGKLTQYTRYLTIGLAILQAT 129
Query: 269 IVACYSLPYSIYAASH-------SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V + ++ SV + +T + G M W+ + I+E G G G SL
Sbjct: 130 GVVALADRNQLFVGCEVPVLPDDSVYSLALTVLTMTAGTAVMMWLGELITERGVGNGMSL 189
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I + I E +LS G + F + +LG+ I ++ V V +G R++ +QY
Sbjct: 190 LIFLNIAARIPEEGANILSSAGGLTF----FFVCVLGLAIIASV--VFVEQGQRRIPVQY 243
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FW 437
A Y+P +N +G+ PV+ + LL P +L ++G P W
Sbjct: 244 -----AKRMVGRRMYGGTSTYLPIKVNQAGVIPVIFASSLLYLPDLLGQLIGDPNEASGW 298
Query: 438 QH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
Q ++ L ++S WV+ +Y + F F I TIT V+D
Sbjct: 299 QQFIQTYLTDQSS-----WVHILLYFSMIIFFTYFYI---------TITFNVDD 338
>gi|269837086|ref|YP_003319314.1| preprotein translocase subunit SecY [Sphaerobacter thermophilus DSM
20745]
gi|269786349|gb|ACZ38492.1| preprotein translocase, SecY subunit [Sphaerobacter thermophilus
DSM 20745]
Length = 432
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 172/346 (49%), Gaps = 35/346 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFV 194
+L A +F E+RR++ T ++V+ R IP+PG DR ++ Q L+
Sbjct: 1 MLEAAINAFRIPELRRKILFTVGILVLFRFIATIPVPGVDREVLQQLLEQNQLLGMLNLF 60
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
SGS L +F S +G+ P I ASI+MQ+L I+P L +L +EG G +I Y
Sbjct: 61 SGS--TLANF------SILAMGVYPYITASIIMQLLTPIIPRLEELSREGQQGRNRINHY 112
Query: 255 IWWISLGFAIL----EAVIVACYSL--PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 308
W+++ A+L +AV++A + + ++ A +++ + + ++ G + + W+ +
Sbjct: 113 THWLTVPLALLQGYGQAVLMANAGVLSDFGLFNADTALRSISIL-LVMTAGTVFLVWLGE 171
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMW 366
I+E+G G G S+II GI+ +++ ++ G++ + +G L+G+ TIV +
Sbjct: 172 LITENGIGNGVSIIIFGGIVASLPQSVANLIGG--GTATQNVLGTVGFILIGLITIVGI- 228
Query: 367 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
V++ EG R++ +Q+ A R YIP +N +GM P++ ++ FP
Sbjct: 229 -VLLNEGVRRIPVQH-----AKRIRRGRVYGGGSTYIPLKVNSAGMIPLIFAISIMVFPG 282
Query: 427 ILASILGSPFWQHVKEILNP-ETSVGARPWVYYTIYAFFVFLFNIF 471
++A+ L + V+ + T+ +Y IY V F F
Sbjct: 283 MIANFLQTSDRDWVRNLAGSVATAFNPNGLLYQVIYFVMVVAFTYF 328
>gi|229844665|ref|ZP_04464804.1| preprotein translocase subunit SecY [Haemophilus influenzae 6P18H1]
gi|229812379|gb|EEP48069.1| preprotein translocase subunit SecY [Haemophilus influenzae 6P18H1]
Length = 441
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQIAERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|257058147|ref|YP_003136035.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 8802]
gi|256588313|gb|ACU99199.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 8802]
Length = 438
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 45/347 (12%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--------- 192
A E+F + + +R RL +T L+++ R G FIP+PG DR S
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILVRFGIFIPIPGIDREAFAAAISSSPVLGFLDI 69
Query: 193 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 251
F G + LG F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 70 FTGGGISTLG---------IFALGILPYINASIIIQLLTAAIPALEDLQKNEGEAGRRKI 120
Query: 252 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
Y ++SLG+A+++++ + L YA ++S V+ T L G+M + W+ + I+
Sbjct: 121 AQYTRYVSLGWAVIQSMGITIGLL--RPYAFNNSAWFVVETVIALTAGSMFVMWLSEIIT 178
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G+SL+I V I+ TL + + ++ LL VF I+ + V V
Sbjct: 179 ERGIGNGASLLIFVSIVASLPRTLGNTIDYAQTGGRQAVAQVVILLFVFLIMIVGIVFVQ 238
Query: 372 EGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
EG R++ + SA R+ E Y+P +N G+ P++ + +L P LA
Sbjct: 239 EGTRRI-------PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLA 291
Query: 430 SILG-----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G S + L P + W Y +Y+ + F+ F
Sbjct: 292 GFFGNQGTVSQVLVQIANTLQPGS------WTYIGVYSLLILFFSYF 332
>gi|421500294|ref|ZP_15947305.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|402268708|gb|EJU18074.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 426
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 161/335 (48%), Gaps = 26/335 (7%)
Query: 145 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 202
N+ S K E+R R+ +T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILLTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 203 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++G A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIGIALVQGFGV-CMWLQSVGLVFEPGLLFFLTTIVTLTAGTVFLMWVGEQISVKGIGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPANIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 379 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+K L+ + VY +YA + F+ F
Sbjct: 294 --AIKTTLS--MMFNQQHPVYMIVYALVIIFFSFF 324
>gi|254464217|ref|ZP_05077628.1| preprotein translocase, SecY subunit [Rhodobacterales bacterium
Y4I]
gi|206685125|gb|EDZ45607.1| preprotein translocase, SecY subunit [Rhodobacterales bacterium
Y4I]
Length = 454
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 142/284 (50%), Gaps = 19/284 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++R R+ T L+++ R+G FIP+PG D + Q F+ + +G GA
Sbjct: 21 TDLRNRILFTIGLLIVYRLGTFIPVPGIDAAALRQ----FMEQAGQGIGGMVSMFTGGAL 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L +VPSL QL+KEG G +KI Y + ++ A +A
Sbjct: 77 GRMGIFALGIMPYISASIIVQLLTSMVPSLEQLKKEGEQGRKKINQYTRYGTVLLATAQA 136
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A SL A + M LV G M + W+ + I++ G G G SLII VGI
Sbjct: 137 YGLAV-SLEQGDLATDPGMYFRMACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGI 195
Query: 328 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ + + + G S P ++G++ + V M+ V + RK+ +QY ++
Sbjct: 196 IAEVPAAIAQFFAS--GRSGAISPAVIIGVILMVVAVIMFVVFMERALRKIHIQYPRRQV 253
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ ++P +NP+G+ P + + LL P+ +++
Sbjct: 254 GMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPTTISA 292
>gi|428781718|ref|YP_007173504.1| preprotein translocase subunit SecY [Dactylococcopsis salina PCC
8305]
gi|428695997|gb|AFZ52147.1| preprotein translocase, SecY subunit [Dactylococcopsis salina PCC
8305]
Length = 448
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 164/356 (46%), Gaps = 53/356 (14%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
NA E+F + + +R RL +T LI++ R+G IP+PG DR Q +L+F
Sbjct: 10 NAQETFMQMAQAAGLRSRLLITVGLILLVRLGVRIPVPGVDRAGFAQAVQDSPISGFLNF 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+SG G + F LGI P I ASI+MQ+L +P L L+K EG G KI
Sbjct: 70 LSG--------GGLSAVGIFALGILPFINASIIMQLLTAALPYLENLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++L AI + +A + PY A + ++ T L G+M + WI + I+E
Sbjct: 122 QITRYVALASAIFNSFGLASFVQPY---AYNPGPIFLLKTVIALTAGSMFVIWISELITE 178
Query: 313 SGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
G G G+SL+I V I+ TL + +Q G +L L+ + IV + V V
Sbjct: 179 RGIGNGASLLIFVNIVAILPTTLGNTIEFAQTGGREAVAQVLVLALVFLVMIVGI--VFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
EG R++ + SA R+ E Y+P +N G+ P++ + LL PS L
Sbjct: 237 QEGTRRI-------PIVSARRQVGRRLYRERTSYLPLRVNQGGVLPIIFASTLLILPSSL 289
Query: 429 ASIL--GSP-----------FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A GS F V LNP G PW+Y ++Y + F+ F
Sbjct: 290 AQFTQGGSEEQTGIAATLNQFLIQVSTYLNPG---GPTPWLYVSVYLLLILFFSYF 342
>gi|417845085|ref|ZP_12491118.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21639]
gi|341955977|gb|EGT82422.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21639]
Length = 441
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSVKHV--MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLPGLVPNVGFAFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|197303832|ref|ZP_03168868.1| hypothetical protein RUMLAC_02571 [Ruminococcus lactaris ATCC
29176]
gi|197297125|gb|EDY31689.1| preprotein translocase, SecY subunit [Ruminococcus lactaris ATCC
29176]
Length = 450
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 155/303 (51%), Gaps = 24/303 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F +IR+RL T +++V+ R G +P PG D I Q++ + +G D
Sbjct: 1 MLKTVRNAFKVEDIRKRLLYTLLMLVVVRFGSQLPTPGVDPTFI-QNFFAQQTG--DAFN 57
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F G+ ++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI + +
Sbjct: 58 FFEAFTGGSFTRMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIAAITRY 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC----GAMTMSWICDTISES 313
+++G A++E++ ++ V + V ++VC G+ + WI + I+E
Sbjct: 118 VTVGLALIESI-----AMSIGFGRQGLLVDYNFVNCAIVVCTLTAGSAFLMWIGERITEK 172
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVT 371
G G G S+++ + I++ + L + +Q + + G +L + +V ++ +++
Sbjct: 173 GVGNGISIVLLINIISRVPDDLVTLYTQFMSGKKLAKAGLAGIIILAILLVVIVFVIILQ 232
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+G R++ +QY + + +IP +N +G+ PV+ ++ L+ P ++A
Sbjct: 233 DGERRIAVQY-----SKKVQGRKTYGGQSSHIPLKVNTAGVIPVIFSSSLMQTPIVIAQF 287
Query: 432 LGS 434
LG
Sbjct: 288 LGK 290
>gi|218245122|ref|YP_002370493.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 8801]
gi|218165600|gb|ACK64337.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 8801]
Length = 438
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 45/347 (12%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--------- 192
A E+F + + +R RL +T L+++ R G FIP+PG DR S
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILVRFGIFIPIPGIDREAFAAAISSSPVLGFLDI 69
Query: 193 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 251
F G + LG F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 70 FTGGGISTLG---------IFALGILPYINASIIIQLLTAAIPALEDLQKNEGEAGRRKI 120
Query: 252 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
Y ++SLG+A+++++ + L YA ++S V+ T L G+M + W+ + I+
Sbjct: 121 AQYTRYVSLGWAVIQSMGITIGLL--RPYAFNNSAWFVVETVIALTAGSMFVMWLSEIIT 178
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G+SL+I V I+ TL + + ++ LL VF I+ + V V
Sbjct: 179 ERGIGNGASLLIFVSIVASLPRTLGNTIDYAQTGGRQAVAQVVILLFVFLIMIVGIVFVQ 238
Query: 372 EGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
EG R++ + SA R+ E Y+P +N G+ P++ + +L P LA
Sbjct: 239 EGTRRI-------PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLA 291
Query: 430 SILG-----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G S + L P + W Y +Y+ + F+ F
Sbjct: 292 GFFGNQGTVSQVLVQIANALQPGS------WTYIGVYSLLILFFSYF 332
>gi|241895168|ref|ZP_04782464.1| preprotein translocase subunit SecY [Weissella paramesenteroides
ATCC 33313]
gi|241871474|gb|EER75225.1| preprotein translocase subunit SecY [Weissella paramesenteroides
ATCC 33313]
Length = 435
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 164/343 (47%), Gaps = 31/343 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
L +VLN+ E +IR++LF T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLFFTLWILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ W+
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRWL 116
Query: 259 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++ A ++++ I A ++ L + + + ++ F+L G M W+ + I+E G G
Sbjct: 117 TIVLAFVQSIGITAGFNQLSQVNLVKTPNTETYLLIGFILTAGTMLSVWLGEMITERGLG 176
Query: 317 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 373
QG S++I GI+ +Y++ + L G R W F +G++ +F +V + +
Sbjct: 177 QGVSMLIFAGIIARLPAGIYQLFKEHILQGDDPARGWAFFVGIMIIFVVVIAFVTWFNQA 236
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
RKV +QY S + Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKVPMQY---------TRRSVGSGSSSYLPLRINIAGVIPVIFASSLLVTPQTILQAFA 287
Query: 434 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S F + V + L+ +T G +Y + LF F
Sbjct: 288 SKFADAGWYNTVMQYLSIQTMQGG------IVYTLLIVLFTFF 324
>gi|383937185|ref|ZP_09990592.1| preprotein translocase subunit SecY [Rheinheimera nanhaiensis
E407-8]
gi|383701728|dbj|GAB60683.1| preprotein translocase subunit SecY [Rheinheimera nanhaiensis
E407-8]
Length = 442
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 27/330 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ + GA +
Sbjct: 16 SELKARLLFVLLAIIVFRLGSFVPIPGIDAAVLAQLFEQ-QKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P++ +L+KEG G KI + +L A L+A+ +
Sbjct: 75 SVFALGIMPYISASIIVQLLTVVHPAMAELKKEGEAGKRKINQMTRYGTLALATLQAIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + LV G M + W+ + I+E G G G SL+I GI+
Sbjct: 135 AT-GLPNMMQGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 387
G+ + + + Q + + +L +GV + W VV E G R++ + Y A
Sbjct: 194 AGFPSAIGQTIEQARQGDLHF--LLLVAIGVIVVAITWFVVFFERGQRRIVVNY-----A 246
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP------FWQHVK 441
+ ++P +N +G+ P + + ++ FP +AS GS F Q +
Sbjct: 247 KRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGVVANFLQELA 306
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P +P +Y +Y+ + F F
Sbjct: 307 LTLSP-----GQP-LYMMLYSAAIIFFCFF 330
>gi|427736163|ref|YP_007055707.1| protein translocase subunit SecY [Rivularia sp. PCC 7116]
gi|427371204|gb|AFY55160.1| protein translocase subunit secY/sec61 alpha [Rivularia sp. PCC
7116]
Length = 437
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 170/340 (50%), Gaps = 31/340 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVD 199
A E+F + + +R RLFVT ++++ R+G +IP+PG DR + ++G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLFVTIGILLLIRLGIYIPIPGIDRVRFSAAMSQGNGLAGILD 68
Query: 200 --ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
G F A L F LGI P I ASI++Q+L +PSL +L+K EG G KI
Sbjct: 69 IFSGGGFSA---LGVFTLGILPFINASIIIQLLTAAIPSLEKLQKDEGEAGRRKISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+++LG+AI++++ ++ L +A V TA LV G+M + W + I+E G G
Sbjct: 126 YVALGWAIVQSIFISSVWLKN--FALDFGPIFVFETALALVAGSMFVMWASEVITERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I + I++ TL +S Q+ G +L LL + TI+ + V V EG
Sbjct: 184 NGASLLIFLNIVSSLPTTLGSTISFAQVGGREAVGQVVVLLLLFLATIIGI--VFVQEGM 241
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ + E ++P +N G+ P++ T +L+ P ++ +
Sbjct: 242 RRI-------PIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFATAILSLPLLIGNFT 294
Query: 433 -GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP G+ W Y IY F + F+ F
Sbjct: 295 QNQQIANFTSTYLNPG---GSGWWAYALIYLFSIIFFSYF 331
>gi|224091887|ref|XP_002309386.1| SecY protein [Populus trichocarpa]
gi|222855362|gb|EEE92909.1| SecY protein [Populus trichocarpa]
Length = 430
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 143/315 (45%), Gaps = 41/315 (13%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 201
FFK + + +V+SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 14 FFKGPLPGKFLKLLGFLVVSRLGIYIPLGGVNREAFAGNLDQNSLLSTLDSFSGGGIGRL 73
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
G F LGI P I A I+ Q+L I P L L+K EG G +KI Y + S+
Sbjct: 74 G---------IFSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYASV 124
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
GFAI++A+ Y P+ S + V+ + LL G++ ++I + IS+ G G+S
Sbjct: 125 GFAIVQAIGQVLYLRPF---VDDFSTQWVLTSVTLLTLGSVFTTYIGEQISDLKLGNGTS 181
Query: 321 LIICVGILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
L+I I++ G T +G + F L +LG+ V V E
Sbjct: 182 LLIFTSIISYLPASFGQTAAQAIQDGNYVGLGTIIFSFFLLVLGI--------VYVQEAE 233
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ L Y AS S + Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 234 RKIPLNY-----ASRYTSSSSGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI 288
Query: 435 PFWQHVKEILNPETS 449
+ LNP S
Sbjct: 289 SALKKAALTLNPGGS 303
>gi|154249797|ref|YP_001410622.1| preprotein translocase subunit SecY [Fervidobacterium nodosum
Rt17-B1]
gi|154153733|gb|ABS60965.1| preprotein translocase, SecY subunit [Fervidobacterium nodosum
Rt17-B1]
Length = 428
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 166/325 (51%), Gaps = 28/325 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---DYLSFVSGSVDELGDF---GAEL 208
E+R R+ T +++++ R+G ++P+PG + + + + ++G V D GA
Sbjct: 13 EVRDRVIFTFLMLLVFRLGIYVPVPGINIKAWGEALSKQGTGLAGGVLSFYDVFTGGAFS 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F + ++P I ASI+MQ+L I+PSL +L KEG +G +K + Y ++LG A L++
Sbjct: 73 RFSVFSMSVTPYINASIIMQLLASIIPSLKELLKEGEEGRKKFQHYTKNLTLGLAALQSF 132
Query: 269 IVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+V+ + Y A ++ V+ LV G M + WI D I+E G G G S++I GI
Sbjct: 133 VVSFGLARSYQGIIAINTWLFSFVSTVSLVAGTMFLLWIGDRITEKGIGNGVSIMIFAGI 192
Query: 328 LTGYTETLYKMLSQLLGS-SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
++ Y S +LG+ ++ W F++ + +F +V + + V + R++K++Y
Sbjct: 193 VSRYPAYFR---SAVLGNLNIFGWIFLIA-VAIFMVVAI--IYVQQAERRIKIEY----- 241
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A+ Y+P +N SG+ P++ +++ P +A I G+ + + + +P
Sbjct: 242 ATRMVGRRIYGGTSTYLPIKVNHSGVIPIIFAWAIISIPEAIAQITGAQWAIKLFSMQSP 301
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
+ IYA +F F F
Sbjct: 302 LMMI---------IYALLIFFFTYF 317
>gi|410867064|ref|YP_006981675.1| Preprotein translocase, SecY subunit [Propionibacterium
acidipropionici ATCC 4875]
gi|410823705|gb|AFV90320.1| Preprotein translocase, SecY subunit [Propionibacterium
acidipropionici ATCC 4875]
Length = 441
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 153/306 (50%), Gaps = 26/306 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG-- 196
+L+ A +F ++R+++F T ++VI R+G IP+P D R + Q S +G
Sbjct: 1 MLHAFASAFKTPDLRKKIFFTLFILVIFRLGSTIPVPNVDVAKIDRCVAQSQTSSAAGLY 60
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
S+ L GA L+L+ F LGI P I +SI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMINLFSGGALLQLAIFALGIMPYITSSIILQLLTVVIPKLEALKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYS----------IYAASHSVKHVMVTAFLLVCGAMTMSWI 306
+++L +L+A A +L S I S+ ++V + G + W+
Sbjct: 121 YLTLVLGVLQA--TAFVTLATSGQLFRTCSDPIVVNDTSIFPIIVMVLTMTAGTTIVMWM 178
Query: 307 CDTISESGFGQGSSLIICVGILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVT 364
+ I++ G G G S++I I + ++L+++ + + G + W+ F+L ++ V +V
Sbjct: 179 GELITDRGVGNGMSILIFTQIAARFPDSLWQIKTSREGQGQAHAWFIFLL-VIAVGLLVM 237
Query: 365 MWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
V + +G R++ +QY A YIP +N SG+ PV+ + +L
Sbjct: 238 AAVVFIEQGQRRIPVQY-----AKRMVGRRMFGGTSTYIPLKVNQSGVIPVIFASSILYL 292
Query: 425 PSILAS 430
P + A+
Sbjct: 293 PVLYAT 298
>gi|434388551|ref|YP_007099162.1| preprotein translocase, SecY subunit [Chamaesiphon minutus PCC
6605]
gi|428019541|gb|AFY95635.1| preprotein translocase, SecY subunit [Chamaesiphon minutus PCC
6605]
Length = 447
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 15/295 (5%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+A E+F + + +R R+ VT L++++R G F+P+PG DR + + + ++
Sbjct: 10 SAQETFVQMAQAAGLRGRILVTLGLLILARFGTFVPIPGIDRVAFAESIKNSPTIGFLDI 69
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISL 260
GA + F LGI P I ASI++Q+L +P+L +L+KE G G KI ++++
Sbjct: 70 FSGGAFSTVGVFALGIIPYINASIIIQLLTTALPALEKLQKEEGEAGRRKISQITRYVAV 129
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
G+ I ++ +A + Y++ + V+ T L G+M + WI + I+E G G G+S
Sbjct: 130 GWGIAYSIGIALWLQKYAL-PGHQTTFFVVSTVMALTAGSMFVMWISELITERGIGNGAS 188
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
L+I + I+ ++L + + LL VF ++T+ V V EG R++
Sbjct: 189 LLIFLNIVAVLPKSLGDTIDLAQSGDSSILTRTVALLAVFILMTVGIVFVQEGTRRI--- 245
Query: 381 YYGFKLASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ SA R+ + E Y+P +N G+ P++ + +L PS LAS G
Sbjct: 246 ----PIISARRQVGRRIQRERTSYLPLRLNQGGVMPIIFASSVLVLPSALASFAG 296
>gi|256825866|ref|YP_003149826.1| protein translocase subunit secY/sec61 alpha [Kytococcus
sedentarius DSM 20547]
gi|256689259|gb|ACV07061.1| protein translocase subunit secY/sec61 alpha [Kytococcus
sedentarius DSM 20547]
Length = 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 168/355 (47%), Gaps = 47/355 (13%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ +F ++R +L T ++ + R+G +P PG D L+ Q + +G+ LG
Sbjct: 1 MLSSFGRAFLTPDLRGKLLFTLAIMALFRLGSHVPTPGIDYSLV-QTCQANGAGTNSLLG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+LS F LGI P I ASI++Q+L ++P +L++EG G K+ Y +
Sbjct: 60 LTNMFSGGALLQLSIFALGIMPYITASIIVQLLTVVIPHFERLKQEGSAGQAKMTQYTRY 119
Query: 258 ISLGFAILEAVIVACYSL-PYSIYAA----------SHSVKHVMVTAFLLVCGAMTMSWI 306
+++G A+L++ + ++ P+ ++ S S+ V + L G + W+
Sbjct: 120 LTIGLAVLQSTTLISFARNPHQLFGGTPAQCPTVMTSESLGTVALMVLTLTAGTGLVMWL 179
Query: 307 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 366
+TI+E G G G SL+I I G+ +L+ + + W F + LL I+T+
Sbjct: 180 GETITEKGIGNGMSLLIFTAIAAGFPGSLWAIKDR------GWDKFAMVLLLGLVILTI- 232
Query: 367 AVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
VV E C R+V +QY A YIP +N + + P++ + +L P
Sbjct: 233 -VVFVEQCQRRVPVQY-----AKRMVGRRMYGGTSTYIPLKLNMANVIPIIFASSILMLP 286
Query: 426 SILASIL----GS--PFW-----QHVKEILNPETSVGARPWVYYTIYAFFVFLFN 469
++A GS P W +H++ +P + VY+ + FF F +
Sbjct: 287 MMVAQFQTPNDGSRPPAWVEWVSRHLQMSTDPVYVI-----VYFALIVFFAFFYT 336
>gi|11467734|ref|NP_050786.1| preprotein translocase subunit SecY [Guillardia theta]
gi|1351058|sp|P28527.2|SECY_GUITH RecName: Full=Protein translocase subunit SecY
gi|81182|pir||S20577 preprotein translocase secY - Cryptomonas sp. chloroplast
gi|3603059|gb|AAC35720.1| SecY-type transporter protein (chloroplast) [Guillardia theta]
Length = 420
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 157/300 (52%), Gaps = 28/300 (9%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
+N + +S K +++ R+ T LIV+SR+G F+P+PG D Q +S + V+ L
Sbjct: 1 MNTSIKSIKKQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIIS--NPLVNFLNV 58
Query: 204 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
F G + F LGI P I ASI++Q+ + +PSL +L+K EG G +KI +++L
Sbjct: 59 FSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVAL 118
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+A+++++ V+ + P Y + + V + L G+M + W + I+E G G G S
Sbjct: 119 VWALIQSIGVSFWVRP---YVFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPS 175
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV------VTEGC 374
L+I + I++G L +LL S ++ + L +F +V +++V+ + EG
Sbjct: 176 LLIFINIISG--------LPKLLQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGI 227
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+++ + +++ + Y+P +N SG+ P++ + +L P+ LA ++ +
Sbjct: 228 KRIPI------ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSN 281
>gi|428205249|ref|YP_007089602.1| protein translocase subunit SecY [Chroococcidiopsis thermalis PCC
7203]
gi|428007170|gb|AFY85733.1| protein translocase subunit secY/sec61 alpha [Chroococcidiopsis
thermalis PCC 7203]
Length = 435
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 169/336 (50%), Gaps = 24/336 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVD 199
A E+F + + +R RL VT +++++R+G F+P+PG +R Q S V G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTIGMLILARLGVFLPVPGINREQFAQSVQNNSAVIGFLD 68
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 258
G L F LGI P I ASI++Q+L +P+L L+K EG G +I ++
Sbjct: 69 IFSGGGLS-TLGVFALGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRQISQVTRYV 127
Query: 259 SLGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+LG+AIL++ I A + P+++ + V+ TA L G+M + W + I+E G G
Sbjct: 128 ALGWAILQSTFIAAIWIRPFAL---NPGPVFVIETAIALTAGSMFVMWASELITERGVGN 184
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G+SL+I V I+ ++L ++ ++ LL VF ++ + V V EG R++
Sbjct: 185 GASLLIFVNIVASLPKSLGDTITLAQTGGRETIGRVIVLLLVFLVMIVGIVFVQEGTRRI 244
Query: 378 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+ SA R+ E Y+P +N G+ P++ + +L P+ LA +
Sbjct: 245 -------PIISARRQVGRKLYLERSSYLPLRLNQGGVMPIIFASAVLILPASLARFTQNE 297
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++ ++P G+ PW+Y +Y + F+ F
Sbjct: 298 YVINISNAISPG---GSTPWLYALVYFVMIVFFSYF 330
>gi|268316428|ref|YP_003290147.1| preprotein translocase subunit SecY [Rhodothermus marinus DSM 4252]
gi|262333962|gb|ACY47759.1| preprotein translocase, SecY subunit [Rhodothermus marinus DSM
4252]
Length = 438
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 162/326 (49%), Gaps = 25/326 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
E+R+R+ T L+V+ R+G ++ LPG D ++ + + ++ L D GA +
Sbjct: 15 EELRQRVLYTLGLLVVYRLGTYVTLPGVDAHILAEVNRQAGTNNLFGLIDLFVGGAFSQA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q++ +VP +L++EG +G KI ++++ L+AV
Sbjct: 75 GIFALGIMPYITASIIIQLMGAVVPYFQKLQREGEEGRRKITQLTRYLTVAITALQAVGY 134
Query: 271 ACYSLPYSIYAASHSVK---HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
A +L Y + V +++ +L G + + W+ + I+E+G G G SLII V I
Sbjct: 135 AI-NLRYGATGQAIVVSPAFFMLIAVIVLTAGTVFVMWLGERITENGIGNGISLIIMVSI 193
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ + +Y +++ F++ L L VF ++T V+VT+G R++ +QY K
Sbjct: 194 IAFLPQAVYNEF------TLKDNLFIVLLELAVFVVITAGVVLVTQGTRRIPVQYA--KR 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILN 445
R +T+ Y+P +N +G+ P++ ++ P+ +A+ GS F Q +
Sbjct: 246 VVGRRVYGGVTQ---YLPLRVNAAGVMPIIFAQSIMFVPATIATFFPGSDFMQQFGSFFS 302
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIF 471
+ W Y +++ V F F
Sbjct: 303 DISG-----WGYSSLFFLLVVFFTYF 323
>gi|46399705|emb|CAF23154.1| putative preprotein translocase SecY [Candidatus Protochlamydia
amoebophila UWE25]
Length = 493
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 149/295 (50%), Gaps = 34/295 (11%)
Query: 169 ISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGDFGAELKLSFFQLGISPQIVA 223
+ R+G FIP+PG + + + GS + ++ GA +++ LG++P I A
Sbjct: 64 VCRLGSFIPVPGINGEVAVSFFRHATGGSQNLFQMVDIFSGGAFSQMTVIALGVTPYISA 123
Query: 224 SILMQVLCHIVPSLVQ-LRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 282
SI+MQ+L +VPSL + LR+ G G KI + ++++ + L++ + A Y+L ++
Sbjct: 124 SIIMQLLVALVPSLQRDLRENGDAGKRKINRWTRFLTIVLSFLQSALFAKYALQINLSRP 183
Query: 283 SHSVKHVM-VTAFLL------------VCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ +TAF L G M + W+ + I+E G G G SLIIC+GIL+
Sbjct: 184 GIVAGELLDITAFGLPWLFYLITIATMTTGTMFLMWVGEQITERGIGNGISLIICLGILS 243
Query: 330 GYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
+ + QL S + +L L+ VF +VT+ ++V +G R++ LQ+
Sbjct: 244 QIPTAMGLIFQQLNLDSQEPGQMNFSTILVLISVFVVVTLATILVIQGHRRIPLQH---- 299
Query: 386 LASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
AR EV+ YIP IN +G+ PV+ + LL FP+ L + +G W
Sbjct: 300 ----ARRVVGRKEVQGGSSYIPLKINYAGVIPVIFASSLLMFPATLGTFVGRGNW 350
>gi|302823445|ref|XP_002993375.1| hypothetical protein SELMODRAFT_187415 [Selaginella moellendorffii]
gi|300138806|gb|EFJ05560.1| hypothetical protein SELMODRAFT_187415 [Selaginella moellendorffii]
Length = 503
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 38/331 (11%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------ 204
FF+ ++ + + + +SR+G +IPLPG DR + SGS+ + F
Sbjct: 92 FFRGKLPGKFLLLLGWLALSRVGTYIPLPGVDR--------AAFSGSMTDNSLFRTLDAF 143
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A IL Q+L + P L +L +KEG G +K+ Y + S+
Sbjct: 144 SGGGIGRLGVCSLGIVPFINAQILFQLLGSLFPELERLQKKEGEAGRKKVLQYTRYASVA 203
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI +A+ Y PY A S+ + + LL GA+ S+I + IS+ G G+SL
Sbjct: 204 FAIFQAIGQVLYIRPY---ADDFSLGWIFTSISLLTIGAVLTSYIGERISDIKLGNGTSL 260
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQ 380
+I I++ ++ + + Q L + LG +G+ F ++ + V V E R++ L
Sbjct: 261 LIFTNIISSLPASVGRTIDQALKDANYAG---LGTIGLSFFLLVLGIVYVQESERRIPLN 317
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y A+R + + Y+PF IN SG+ P++ +T LA S +A G+ + ++
Sbjct: 318 Y-------ASRYSGGLQK-SAYLPFKINSSGVMPIIFSTSALALTSSVARFSGATGFNNI 369
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP S Y A + FN F
Sbjct: 370 VATLNPGGS------FYLPTNAVLIAFFNYF 394
>gi|325972641|ref|YP_004248832.1| preprotein translocase subunit SecY [Sphaerochaeta globus str.
Buddy]
gi|324027879|gb|ADY14638.1| preprotein translocase, SecY subunit [Sphaerochaeta globus str.
Buddy]
Length = 438
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 167/348 (47%), Gaps = 47/348 (13%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--------------QDY 190
N+ E + ++R+++F+T L+++SR+G IP+PG D ++ +Y
Sbjct: 3 NSLVEMYRIKDLRKKIFITLGLLIVSRVGAVIPIPGIDPEVLKLFFLSQSSSSNIGLTEY 62
Query: 191 LSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 250
L+F SG GA S F LG+ P I I++Q+L ++PSL +L ++ GH+K
Sbjct: 63 LNFFSG--------GAFSNFSLFMLGVMPYISTQIIVQLLMLVIPSLKKLAQDP-SGHKK 113
Query: 251 IKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTI 310
I+ Y + ++ ++++ +V Y+ V +V + G+M + WI + I
Sbjct: 114 IQQYTRYGTIVVCLIQSYVVTIYANSIPGVMTMGIVPFTLVAMLTVTTGSMLLIWIGNKI 173
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
++ G G G SL+I GI+ + E + + + + P ++ ++ V +V + VV
Sbjct: 174 TQWGIGNGISLLIFAGIVARFPEAMSVLFRSISAGVLN--PIVVLVVFVMFLVVVALVVY 231
Query: 371 TE-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
E G RK+ + Y G K+ A YIP +NPSG+ PV+ + LL+FP
Sbjct: 232 EEQGVRKIPVNYAKRVVGRKMYGAQST---------YIPIKVNPSGVIPVIFASALLSFP 282
Query: 426 SILASILGSPF-W-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+A+ LG W LNP+ GA Y IYA + F F
Sbjct: 283 LQIATTLGPEVRWLAAFANWLNPQ---GAP---YLIIYALLIIAFAFF 324
>gi|346311567|ref|ZP_08853570.1| preprotein translocase [Collinsella tanakaei YIT 12063]
gi|345900630|gb|EGX70450.1| preprotein translocase [Collinsella tanakaei YIT 12063]
Length = 427
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 45/348 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR----LIPQDYLSFVSGSV 198
+LN +F E+R ++ T ++V+ RIG +P+PG + L S SG++
Sbjct: 1 MLNGLKNTFRIKELRGKILFTIAMLVVYRIGAHVPVPGIPFQGMLGLFQSAGDSVASGAM 60
Query: 199 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L F GA +S F LGI P I SI++Q+L +VPSL L +EG G KI Y
Sbjct: 61 ALLNLFSGGALSYVSVFSLGIMPYITGSIILQMLQSVVPSLHALAREGEVGQTKITQYTR 120
Query: 257 WISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++LG AI+ A+ + + + ++ A + +M+ L GAM + WI + I++
Sbjct: 121 YLTLGLAIVNAIGYLFLFKSFGISFNGAGAPGIIFDIMIVG-TLTAGAMLIMWIGELITQ 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV--- 369
G G G SLII I+ G + ++ SSV G GV T V ++ ++
Sbjct: 180 RGIGNGMSLIIFANIMAGLPQAIF--------SSVE------GTAGVITTVVIFVIILCV 225
Query: 370 ------VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 423
+ G R++ +QY A + Y+P +N +G+ P++ + LL
Sbjct: 226 IPLIVFIERGQRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVIPIIFASALLY 280
Query: 424 FPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
FP+ +A + W ++ + N ++ W+ + + + F F
Sbjct: 281 FPAQIAVFFPNIGW--IQTVANAMST----GWINWILNVLLIVFFAYF 322
>gi|17231689|ref|NP_488237.1| preprotein translocase subunit SecY [Nostoc sp. PCC 7120]
gi|17133332|dbj|BAB75896.1| preprotein translocase SecY subunit [Nostoc sp. PCC 7120]
Length = 437
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 27/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVD 199
A E+F + + +R RL VT ++++ R+G F+P+PG DR + S + G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSNNAIFGLLD 68
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 258
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYV 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++G+AI ++V A +L +A V TA L G+M + W + I+E G G G
Sbjct: 128 TVGWAIFQSV--AFSALFLQQFALQPGPVFVAETAIALTAGSMFVMWASELITERGIGNG 185
Query: 319 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG R+
Sbjct: 186 ASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIVGI--VFVQEGIRR 243
Query: 377 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + SA R+ + E Y+P + G+ P++ +L+ P ++A+ +
Sbjct: 244 I-------PIISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANFTKN 296
Query: 435 PFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P + V L+P G+ WVY +Y + F+ F
Sbjct: 297 PELANIVNTYLSPG---GSGSWVYALVYLISIVFFSYF 331
>gi|70725823|ref|YP_252737.1| preprotein translocase subunit SecY [Staphylococcus haemolyticus
JCSC1435]
gi|68446547|dbj|BAE04131.1| preprotein translocase SecY subunit [Staphylococcus haemolyticus
JCSC1435]
Length = 430
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 29/332 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
SFFK+ E+R ++F T ++VI +IG +IP PG + P + G L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPE--PFEQQGSDQGVAALLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEVGKRKLSNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMS-----WICDTISESGFGQGSS 320
+++ +A ++ Y + H + ++LL+ +T W+ D I++ G G G S
Sbjct: 125 QSIGMA---FQFNNYLGGKLIIHQSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGIS 181
Query: 321 LIICVGILTGYTETLYKMLSQ-LLGS--SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
+II GIL+ ++ + + Q +G+ + W ++GL+ ++T+ A+ V E RK+
Sbjct: 182 IIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLVLLTIGAIYVLEAKRKI 241
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADW 295
Query: 438 -QHVKEILNPETSVGARPWVYYTI-----YAF 463
Q + E NP + G +V I YAF
Sbjct: 296 AQTISEYANPSNTYGMIVYVVLIIAFTYFYAF 327
>gi|238916285|ref|YP_002929802.1| preprotein translocase subunit SecY [Eubacterium eligens ATCC
27750]
gi|238871645|gb|ACR71355.1| preprotein translocase SecY subunit [Eubacterium eligens ATCC
27750]
Length = 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 162/336 (48%), Gaps = 29/336 (8%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAE 207
+F +IR+++ T +++V+ R+G +P+PG D +G + L F G+
Sbjct: 8 AFKNKDIRKKIIYTLLILVVVRVGSLLPIPGVDTNYFSSLLSGINTGDLSYLSAFTGGSF 67
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI S ++++G +++E+
Sbjct: 68 ERMSLFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIASITRYVTIGLSLIES 127
Query: 268 VIVACYSLPYSIYAAS------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+ +A + S H V ++V L G+ + W+ + I+E G G G S+
Sbjct: 128 IAMAVGFGRTGLIKDSAQLSTLHYVVCIIVVVAALTAGSAVLMWLGERITEKGVGNGISI 187
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
++ + I++G + S + + +L + ++ + + +G R++ +
Sbjct: 188 VLLINIISGMPSDFATLYSTFVAPKTPAKGVLAAVIILAILIVMVVLVCFLQDGERRIPV 247
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------ 433
QY + + IP +N +G+ P++ + L+ FP I+A + G
Sbjct: 248 QY-----SQKVSGRRTVGGQSTNIPLKVNTAGVMPIIFASSLMQFPVIIAQLFGKSYEWT 302
Query: 434 ----SPFWQHVKEILNPETSVGARPW-VYYTIYAFF 464
S +W V+ P+ S+G + V I+A+F
Sbjct: 303 RYLSSSYWCRVEA---PKYSIGLLVYIVLLIIFAYF 335
>gi|221638133|ref|YP_002524395.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides KD131]
gi|221158914|gb|ACL99893.1| Preprotein translocase secY subunit [Rhodobacter sphaeroides KD131]
Length = 445
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 14 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 74 IFALGIMPYISASIIVQLMASMVPKLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 134 M-SLEAGDLVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 192
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 193 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 250
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G
Sbjct: 251 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQ 289
>gi|424824804|ref|ZP_18249791.1| putative preprotein translocase subunit SecY [Chlamydophila abortus
LLG]
gi|333409903|gb|EGK68890.1| putative preprotein translocase subunit SecY [Chlamydophila abortus
LLG]
Length = 457
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A + S+P + S K + T ++ G + + WI +
Sbjct: 126 ACIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDRGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY L +R + P Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQY---ALRVISRREIP--GGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + V +L+P + WVY + Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYF 342
>gi|342903394|ref|ZP_08725205.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21621]
gi|373467816|ref|ZP_09559105.1| preprotein translocase, SecY subunit [Haemophilus sp. oral taxon
851 str. F0397]
gi|417838901|ref|ZP_12485121.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19107]
gi|417842269|ref|ZP_12488363.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19501]
gi|417843935|ref|ZP_12490000.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21127]
gi|419838862|ref|ZP_14362282.1| preprotein translocase, SecY subunit [Haemophilus haemolyticus
HK386]
gi|341947484|gb|EGT74133.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19501]
gi|341948398|gb|EGT75028.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21127]
gi|341955498|gb|EGT81954.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21621]
gi|341956055|gb|EGT82495.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19107]
gi|371757474|gb|EHO46263.1| preprotein translocase, SecY subunit [Haemophilus sp. oral taxon
851 str. F0397]
gi|386910090|gb|EIJ74752.1| preprotein translocase, SecY subunit [Haemophilus haemolyticus
HK386]
Length = 441
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLPGLVPNVGFGFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>gi|296395268|ref|YP_003660152.1| preprotein translocase subunit SecY [Segniliparus rotundus DSM
44985]
gi|296182415|gb|ADG99321.1| preprotein translocase, SecY subunit [Segniliparus rotundus DSM
44985]
Length = 437
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 154/315 (48%), Gaps = 31/315 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGDFGAEL 208
++RR++FV+ ++V+ R+G +P PG + + + + G S+ L GA L
Sbjct: 13 DLRRKIFVSIGIVVLYRLGATLPSPGVNYKNVHECLDQVSKGDSQGVYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +G+ P I ASI++Q+L ++P QLRKEG G K+ Y ++++ A+L++
Sbjct: 73 QLSVFAIGVVPYITASIIVQLLTVVIPRFEQLRKEGQTGQTKMTQYTRYLAIALALLQSS 132
Query: 269 IVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+ + + + + H + ++V ++ GA + W + ISE G G G SL
Sbjct: 133 AIVALASRHQLLRSCTRDILDGHEIFQLIVIVLVMTAGATLVMWFGEIISERGIGNGMSL 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 380
+I GI ++L G + L+ V ++ M +V+ + +G R++ +Q
Sbjct: 193 LIFAGIAARIPAEGKQILQTRGG-------LVFALVCVAAVIIMASVIFIEQGQRRIPVQ 245
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSPFW 437
Y + S Y+P +N +G+ PV+ + LL P+++ +L G+ W
Sbjct: 246 YAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYIPNLIIELLSSRGTSGW 300
Query: 438 QH--VKEILNPETSV 450
Q ++NP + V
Sbjct: 301 QRWIQNNLVNPSSYV 315
>gi|254461313|ref|ZP_05074729.1| preprotein translocase, SecY subunit [Rhodobacterales bacterium
HTCC2083]
gi|206677902|gb|EDZ42389.1| preprotein translocase, SecY subunit [Rhodobacteraceae bacterium
HTCC2083]
Length = 447
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 143/288 (49%), Gaps = 19/288 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R R+ T L+++ R+G FIP+PG D + + S G + F GA ++
Sbjct: 14 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGAALREFMESAGQGIGGMVSMFTGGALGRMG 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L +VP L QL+KEG G +KI Y + ++ A ++A
Sbjct: 74 IFALGIMPYISASIIVQLLTSMVPQLEQLKKEGQQGQKKINQYTRYGTVALATMQA---- 129
Query: 272 CYSLPYSIYAASHSVKHVM----VTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
Y L S+ A + + LV G M + W+ + I+ G G G SLII VGI
Sbjct: 130 -YGLAVSLEAGGLVTEGGLYFRAACLITLVGGTMFLMWLGEQITARGIGNGISLIIFVGI 188
Query: 328 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ L + + G S P ++G++ + + + V + RK+ +QY ++
Sbjct: 189 IAEVPAALAQFFAS--GRSGAISPAVIVGVILMVVVTIAFVVFMERALRKIHIQYPRRQV 246
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+E S ++P +NP+G+ P + + LL P+ +++ G+
Sbjct: 247 GMRVQEGS-----SSHLPVKVNPAGVIPAIFASSLLLLPATISTFSGN 289
>gi|12643627|sp|O63066.1|SECY_MAIZE RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|2934902|gb|AAC05019.1| cpSecY [Zea mays]
Length = 553
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 135 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 192
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++A
Sbjct: 193 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 252
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 253 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 310 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY------ 361
Query: 388 SAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + LN
Sbjct: 362 -ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALN 420
Query: 446 P 446
P
Sbjct: 421 P 421
>gi|413916905|gb|AFW56837.1| chloroplast SecY-1 [Zea mays]
Length = 553
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 135 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 192
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++A
Sbjct: 193 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 252
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 253 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 310 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY------ 361
Query: 388 SAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + LN
Sbjct: 362 -ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALN 420
Query: 446 P 446
P
Sbjct: 421 P 421
>gi|390629535|ref|ZP_10257529.1| Preprotein translocase subunit SecY [Weissella confusa LBAE C39-2]
gi|390485171|emb|CCF29877.1| Preprotein translocase subunit SecY [Weissella confusa LBAE C39-2]
Length = 435
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 169/343 (49%), Gaps = 31/343 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
L +VLN+ E +IR++LF T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLFFTLGILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ ++
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRYL 116
Query: 259 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++ A ++++ I A ++ L + +++ ++ F+L G M W+ + I+E G G
Sbjct: 117 TIVLAFVQSIGITAGFNQLSQVNLVKTPNLETYLLIGFILTAGTMFAVWLGEMITERGLG 176
Query: 317 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 373
QG S++I GI+ +Y++ + L G R W F++G+L +F +V + +
Sbjct: 177 QGVSMLIFAGIIARVPAGVYQLFKEHVLQGDDPARGWAFLVGILLIFVLVIAFVTWFNQA 236
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
RK+ +QY + ++ + S Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKIPMQYT--RRSTGSGNSS-------YLPLKINVAGVIPVIFASSLLVTPQTILQAFA 287
Query: 434 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S F + + + L+ +T G +Y + LF F
Sbjct: 288 SKFADAGWYNTLMQYLSMQTMQGG------IVYTLLIILFTFF 324
>gi|288818036|ref|YP_003432383.1| preprotein translocase SecY subunit [Hydrogenobacter thermophilus
TK-6]
gi|384128800|ref|YP_005511413.1| preprotein translocase subunit SecY [Hydrogenobacter thermophilus
TK-6]
gi|288787435|dbj|BAI69182.1| preprotein translocase SecY subunit [Hydrogenobacter thermophilus
TK-6]
gi|308751637|gb|ADO45120.1| preprotein translocase, SecY subunit [Hydrogenobacter thermophilus
TK-6]
Length = 432
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 22/307 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 210
+ R+R T ++ I R+G IPLPG D + +D+ G++ L D G L ++
Sbjct: 12 EDFRKRFLYTLLMFAIYRLGSHIPLPGIDTTAL-EDFFKSFQGTIFYLYDIFSGGNLGRM 70
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 269
+ F LG+ P I ASI+MQ+L VP L +L KE D G KI Y ++++ A ++++
Sbjct: 71 TLFALGVMPYISASIMMQLLTVAVPELQRLAKEEGDYGRYKINQYTRYLTVFVAFVQSLG 130
Query: 270 VACY--------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V+ + P + + T LV M + W+ D I+E G G G SL
Sbjct: 131 VSLWLQNQVSPRGFPI---VPDSGIVFTLTTVIALVSSTMFLVWVGDRITEKGIGNGMSL 187
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI+ + ++L L + + F+ ++ V ++ + V + E R++ +QY
Sbjct: 188 LIFAGIVANFPNASIRVLEMLKNGDLSPFAFVGAIIFVIAVI-VGIVFMQEAERRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
R++ + Y+P INP+G+ P++ LL PS + + P + +
Sbjct: 247 ---PRRQIGRQE--VAGGSTYLPIKINPAGVIPIIFAQSLLIIPSTVIGFINHPIARLLH 301
Query: 442 EILNPET 448
+ NP T
Sbjct: 302 DAFNPTT 308
>gi|340755353|ref|ZP_08692043.1| preprotein translocase, SecY subunit [Fusobacterium sp. D12]
gi|419841112|ref|ZP_14364490.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|340573497|gb|EFS24015.2| preprotein translocase, SecY subunit [Fusobacterium sp. D12]
gi|386906131|gb|EIJ70876.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 426
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 160/335 (47%), Gaps = 26/335 (7%)
Query: 145 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 202
N+ S K E+R R+ T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 203 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++G A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIGIALVQGFGV-CMWLQSVGLVFEPGLLFFLTTIVTLTAGTVFLMWVGEQISVKGIGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPANIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 379 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+K L+ + VY +YA + F+ F
Sbjct: 294 --AIKTTLS--MMFNQQHPVYMIVYALVIIFFSFF 324
>gi|126461155|ref|YP_001042269.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides ATCC
17029]
gi|429207712|ref|ZP_19198968.1| Preprotein translocase secY subunit [Rhodobacter sp. AKP1]
gi|126102819|gb|ABN75497.1| protein translocase subunit secY/sec61 alpha [Rhodobacter
sphaeroides ATCC 17029]
gi|428189105|gb|EKX57661.1| Preprotein translocase secY subunit [Rhodobacter sp. AKP1]
Length = 452
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 21 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMASMVPKLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 M-SLEAGDLVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 200 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQ 296
>gi|359773719|ref|ZP_09277111.1| preprotein translocase SecY subunit [Gordonia effusa NBRC 100432]
gi|359309164|dbj|GAB19889.1| preprotein translocase SecY subunit [Gordonia effusa NBRC 100432]
Length = 444
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 43/348 (12%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF----- 204
+F ++R+++ ++V+ R+G +P PG D R++ GS ++
Sbjct: 8 AFRTPDLRKKILFVIGILVLYRLGATLPSPGVDYRVVDACLAEASKGSSADIYSLINMFS 67
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y ++++G A
Sbjct: 68 GGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLTVGLA 127
Query: 264 ILEAV-IVACYSL-------------PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 309
IL+A IVA + P I + HS+ + + ++V GA + W +
Sbjct: 128 ILQATGIVALAAQGQLLRGGEGENCNPTEI-VSDHSITSLAIIVVVMVAGACLVMWFGEL 186
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G SL+I GI + +L ++R F+L L+ I+ V
Sbjct: 187 ITERGIGNGMSLLIFAGIAARLPAEGHTILQS---GTLR---FVLVLVAALVILA-GVVF 239
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
+ +G R++ +QY + S Y+P +N +G+ PV+ + LL P ++
Sbjct: 240 IEQGQRRIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPQLIL 294
Query: 430 SILGS------PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + WQ K I N T G WVY +Y + F F
Sbjct: 295 QLTSNSSDGEQSGWQ--KFISNYLTDPGN--WVYIVVYFAMIIFFTYF 338
>gi|260886896|ref|ZP_05898159.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|330839306|ref|YP_004413886.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|260863495|gb|EEX77995.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|329747070|gb|AEC00427.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
Length = 418
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 17/285 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F +G++ L D GA K S
Sbjct: 13 ELRQKVIFTLIMFAVFRLGTHIPVPGVDPSAIEQ---LFATGNLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I ASI+MQ+L ++P+L Q KEG +GH+K ++++ A +AV ++
Sbjct: 70 IFAMSITPYINASIIMQLLTVVIPTLEQWSKEGQEGHKKTTKVTRYLTVALAFFQAVGMS 129
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L +I + S +++ A L G + + WI + I+ +G G G SLII GI+
Sbjct: 130 I-GLKQAIL--NPSPVSILIIAITLTGGTIFLMWIGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ L + S L ++ ++ F+ ++ + IV + + + EG R+V + Y +
Sbjct: 187 PKNLGTIYSYLQAGTISYFNAFVFAVIALLMIV--FVIYIQEGNRRVPISYAKRVVGKKT 244
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
S +IP +N +G+ P++ + +L FP +A + P
Sbjct: 245 YGGS-----SSHIPLKVNHAGVIPIIFASSVLMFPVTVAQFIEVP 284
>gi|381388744|ref|NP_001105505.2| preprotein translocase subunit SECY, chloroplastic [Zea mays]
gi|194701264|gb|ACF84716.1| unknown [Zea mays]
Length = 553
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 135 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 192
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++A
Sbjct: 193 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 252
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 253 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 310 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY------ 361
Query: 388 SAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + LN
Sbjct: 362 -ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALN 420
Query: 446 P 446
P
Sbjct: 421 P 421
>gi|345858444|ref|ZP_08810837.1| preprotein translocase, SecY subunit [Desulfosporosinus sp. OT]
gi|344328463|gb|EGW39848.1| preprotein translocase, SecY subunit [Desulfosporosinus sp. OT]
Length = 428
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 171/345 (49%), Gaps = 38/345 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFV 194
++++ ++ +++R+++ T ++ +I RIG IP+P D + + D++ +
Sbjct: 2 IVDSLKNAWNVADLRKKIGYTLLMFLIFRIGAHIPIPFIDHDTLKKMLGTGGMFDFMDTL 61
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
SG G+ +LS F L I+P + ASI++Q+L ++PSL +L KEG G +KI Y
Sbjct: 62 SG--------GSFKRLSVFALSITPYVTASIILQLLTIVIPSLERLSKEGDYGRKKITQY 113
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAA----SHSVKH--VMVTAFLLVCGAMTMSWICD 308
+ ++G ++A + L Y + A S ++K ++ A +L G + W+ +
Sbjct: 114 TRYSTVGLGFIQA-----FGLTYGVRGALNIPSPALKWPIYLLVALVLTAGTAFLMWLGE 168
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWA 367
I+E G G G SLII GI++ + + + + L + + + L LL VF +T
Sbjct: 169 AITEKGIGNGISLIIFAGIVSRVPDAIKSLWNMLRVGEINAFSVIGLALLVVF--ITAGV 226
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
+ V EG R+V +QY A +IP +N +G+ PV+ LLAFP
Sbjct: 227 IYVQEGTRRVSVQY-----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAISLLAFPQT 281
Query: 428 LAS-ILGSPFWQHVKEILNPETSVGARPW--VYYTIYAFFVFLFN 469
+A+ I S F + V + S+ + P+ VY + FF + +
Sbjct: 282 IATWIPTSAFARFVNTWFSMNGSITSIPYLLVYGVLIIFFTYFYT 326
>gi|74316443|ref|YP_314183.1| preprotein translocase subunit SecY [Thiobacillus denitrificans
ATCC 25259]
gi|74055938|gb|AAZ96378.1| SecY protein [Thiobacillus denitrificans ATCC 25259]
Length = 437
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 152/326 (46%), Gaps = 22/326 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++RRL +++ RIG FIP+PG D ++ Q + S G + F GA + S
Sbjct: 12 GDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFNMFSGGALSRFS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ + P L L+KEG G KI Y + +L A+ +A+ +A
Sbjct: 72 VFALGIMPYISASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTLFLAVFQALGIA 131
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + ++T L G M + W+ + I+E G G G S+II GI G
Sbjct: 132 IALEAQAGLVLDPGMAFRLITVVTLTAGTMFLMWLGEQITERGLGNGISIIIFAGIAAGL 191
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ L +L + P +L L +VT V V G RK+ + Y A R
Sbjct: 192 PSAIGGTL-ELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNY-------AKR 243
Query: 392 EDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILN 445
+ + ++P +N +G+ P + + ++ FP+ LA GS + + V L+
Sbjct: 244 QVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGATLS 303
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIF 471
P +P VY +YA + F F
Sbjct: 304 P-----GQP-VYVLLYALAIIFFCFF 323
>gi|284929579|ref|YP_003422101.1| protein translocase subunit secY/sec61 alpha [cyanobacterium
UCYN-A]
gi|284810023|gb|ADB95720.1| protein translocase subunit secY/sec61 alpha [cyanobacterium
UCYN-A]
Length = 438
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--VD 199
A E+F + + +R RL +T L+ + R G FIP+PG DR + ++S +S S +
Sbjct: 10 TAQETFLQMAQAAGLRSRLLITIGLLTLIRFGIFIPIPGIDR----EKFISAISNSPVLG 65
Query: 200 ELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
L F G L F LGI P I ASI+MQ+L +PSL L+K EG G KI
Sbjct: 66 FLDIFTGGGISTLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+++ G+A++++ + L YA S + V T L G+M + W+ + I+E G G
Sbjct: 126 YVAAGWAVIQSTAITVGLLRE--YALSDTFWFVPETVLALTAGSMFVMWVSELITERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G+SL+I V I+ TL + + + ++ LL VF ++ + V V EG R+
Sbjct: 184 NGASLLIFVNIVASLPRTLGQTIDYAQTGGRQAVAQVIILLLVFLVMIVGIVFVQEGTRR 243
Query: 377 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + SA R+ E Y+P +N G+ P++ + +L P L LGS
Sbjct: 244 I-------PIISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLIGFLGS 296
Query: 435 PFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF 471
V E L T+ RP W Y +Y+ + F+ F
Sbjct: 297 --GGVVTETLIKVTNA-LRPGTWTYVGVYSILILFFSYF 332
>gi|372278290|ref|ZP_09514326.1| preprotein translocase subunit SecY [Oceanicola sp. S124]
Length = 454
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 19/288 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+E+R+R+ T L++I R+G +IP+PG D + + F+ G+ +G GA
Sbjct: 21 TELRKRILFTIGLLIICRLGTYIPVPGIDGAALRE----FMEGAGQGIGGMLSMFTGGAL 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L+A
Sbjct: 77 GRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRYGTVLLATLQA 136
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A SL A+ + + LV G M M W+ + I+ G G G SLII VGI
Sbjct: 137 YGLAV-SLEAGDLASDPGLFFRLEAVITLVGGTMFMMWLGEQITARGVGNGISLIIFVGI 195
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKL 386
+ L + + G S P ++ + V I + VV E RK+ +QY ++
Sbjct: 196 IAEVPAALAQFFAS--GRSGAISPAVIIGVIVMVIAVIAFVVFMERALRKIHIQYPRRQV 253
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P+ +A+ GS
Sbjct: 254 GMKVYDGG-----SSHLPIKVNPAGVIPAIFASSLLLLPTTIATFSGS 296
>gi|268597765|ref|ZP_06131932.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA19]
gi|268683069|ref|ZP_06149931.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID332]
gi|268551553|gb|EEZ46572.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA19]
gi|268623353|gb|EEZ55753.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID332]
Length = 436
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 147/294 (50%), Gaps = 15/294 (5%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A R+ + + ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 -------AKRQFNGRVGSQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|268683265|ref|ZP_06150127.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-92-679]
gi|268623549|gb|EEZ55949.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-92-679]
Length = 436
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 147/294 (50%), Gaps = 15/294 (5%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A R+ + + ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 -------AKRQFNGRVGSQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|77462279|ref|YP_351783.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides 2.4.1]
gi|77386697|gb|ABA77882.1| protein translocase subunit secY/sec61 alpha [Rhodobacter
sphaeroides 2.4.1]
Length = 452
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 21 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMASMVPRLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 M-SLEAGDLVTDPGLFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 200 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQ 296
>gi|332560160|ref|ZP_08414482.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides WS8N]
gi|332277872|gb|EGJ23187.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides WS8N]
Length = 452
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 21 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMASMVPRLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 M-SLEAGDLVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 200 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQ 296
>gi|227549860|ref|ZP_03979909.1| preprotein translocase subunit SecY [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078115|gb|EEI16078.1| preprotein translocase subunit SecY [Corynebacterium
lipophiloflavum DSM 44291]
Length = 442
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 171/354 (48%), Gaps = 44/354 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELG 202
++F +++R+++ +T L+V+ R+G IP PG D LI G S+ L
Sbjct: 6 QAFRDADLRKKILITLALLVLYRVGAQIPTPGVDYALISARLNEVSQGDQATMFSIIGLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++G
Sbjct: 66 SGGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQTKMTQYTRYLTVGL 125
Query: 263 AILE-AVIVAC--------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
A+L+ A IVA +P I ++ +++ ++ GA+ + W+ + I+E
Sbjct: 126 ALLQSAGIVALADREQLLGQGMP--ILVEDRTIWTLIMMIIVMTSGAVLIMWLGEIITEK 183
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SL+I GI T +L Q G + F L +L ++ + + V +G
Sbjct: 184 GVGNGMSLLIFAGIATQIPAQGAIILEQSGGVT-----FGL-VLAALIVLVVGIIFVEQG 237
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI-- 431
R++ +QY + S Y+P +N +G+ PV+ + LL P ++ I
Sbjct: 238 QRRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLLYVPILITQIVT 292
Query: 432 LGSP-----FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+ +P +W + + + NP + W Y IY + F+ F VSI Y
Sbjct: 293 MNNPTPPDNWWMNNVMAWLQNPGS------WQYILIYFAMIIFFSYF-YVSIQY 339
>gi|427707972|ref|YP_007050349.1| protein translocase subunit SecY [Nostoc sp. PCC 7107]
gi|427360477|gb|AFY43199.1| protein translocase subunit secY/sec61 alpha [Nostoc sp. PCC 7107]
Length = 437
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 170/341 (49%), Gaps = 33/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R RL VT ++++ R+G F+P+PG DR + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDR----TRFHEAISGNNSIF 64
Query: 202 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++++ +AI+++ + + L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVCWAIIQSTAFSAFFLQQ--FALTPGPVFVAETAIALTAGSMFVMWASELITERGI 182
Query: 316 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G+SL+I V I+ ++L L Q+ G + +L ++ + TIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVVVFLATIVGI--VFVQEG 240
Query: 374 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 241 IRRI-------PIISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANF 293
Query: 432 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + V L+P G+ PWVY +Y + F+ F
Sbjct: 294 TKNPELANIVNTYLSPG---GSAPWVYALVYLTSIVFFSYF 331
>gi|336326404|ref|YP_004606370.1| preprotein translocase subunit [Corynebacterium resistens DSM
45100]
gi|336102386|gb|AEI10206.1| preprotein translocase subunit [Corynebacterium resistens DSM
45100]
Length = 442
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 169/351 (48%), Gaps = 39/351 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDF 204
+F +++R+++ T +IV+ R+G IP PG D I S + S + L
Sbjct: 6 SAFKNADLRKKILFTLAMIVLFRVGSQIPTPGVDYAAITNQIKSLTNNSAVYSLINLFSG 65
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+
Sbjct: 66 GALLRLSVFAVGIMPYITASIIIQLLTVVIPKFEQLKKEGQTGQAKMTEYTRYLTVALAL 125
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-------GAMTMSWICDTISESGFGQ 317
L++ + + + V V F LV GA+ + W+ + I++ G G
Sbjct: 126 LQSAGIVALADRKQLLGQGIPVLKDNVGVFGLVTMVLVMTSGAVLVMWLGELITDRGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G SL+I GI T +L + + +L SS P ++ I+ + V + +G R++
Sbjct: 186 GMSLLIFAGIAT----SLPREGATILQSS--GGPVFAAVVVGVLILVVGVVFMEQGQRRI 239
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSP 435
+QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ GSP
Sbjct: 240 PVQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGSP 294
Query: 436 ------FW-QHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+W ++V +L NP W Y IY + F+ F VS+ Y
Sbjct: 295 QAAHDNWWNRNVMSVLHNPAA------WQYIVIYLAMIIFFSFF-YVSVQY 338
>gi|392404103|ref|YP_006440715.1| protein translocase subunit secY/sec61 alpha [Turneriella parva DSM
21527]
gi|390612057|gb|AFM13209.1| protein translocase subunit secY/sec61 alpha [Turneriella parva DSM
21527]
Length = 458
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 165/342 (48%), Gaps = 43/342 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-ELGDF------GAE 207
++R+++ T ++++ RIG I +PG D R++ QDY S +G L D+ GA
Sbjct: 13 DLRKKILFTLGMLLLFRIGAHITVPGLDFRVL-QDYFSKAAGGQSGNLTDYIDLFAGGAF 71
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS F LGI P I ASI+MQ++ VPSL +L KEG G KI Y + ++ L+A
Sbjct: 72 KRLSVFALGIMPYISASIIMQIMMVAVPSLQRLAKEGDFGRRKINQYTRYGTVLLCALQA 131
Query: 268 VIVACY--SLPYSIYAASHSV--------KHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ Y SL + + + +T + G + + W+ + ++E G G
Sbjct: 132 YGITVYITSLHFEALQGNKGMLIPGGPGAGFTAMTILTITAGTILLMWMGELMTERGIGN 191
Query: 318 GSSLIICVGILTGYTETLYKMLSQLL-GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G+SLII GI+ G L + L + G F+ LL +F + +++++EG RK
Sbjct: 192 GTSLIIFAGIIAGAPAALGQFLGDIRNGQGEPILAFI--LLVLFIAMISMSILLSEGQRK 249
Query: 377 VKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
+ LQY G ++ A + PI +N + + P++ + L+ FPS +AS
Sbjct: 250 IPLQYGKRIVGRRMVQGASQTLPI---------KVNAANVMPIIFASSLMIFPSQIASYF 300
Query: 433 GS---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GS F + +++ L P T Y+ IY + F F
Sbjct: 301 GSRYQGFAETIQKYLAPGT------MTYFIIYILLILFFAYF 336
>gi|261867274|ref|YP_003255196.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415771218|ref|ZP_11485253.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416108417|ref|ZP_11591050.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346847|ref|ZP_21154806.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261412606|gb|ACX81977.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348004337|gb|EGY44851.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348656386|gb|EGY74005.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443541209|gb|ELT51669.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 441
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHFLVLLL-IAVIVLAVTYFVVFVERGHRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|119511161|ref|ZP_01630278.1| preprotein translocase SecY [Nodularia spumigena CCY9414]
gi|119464149|gb|EAW45069.1| preprotein translocase SecY [Nodularia spumigena CCY9414]
Length = 437
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 23/336 (6%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVD 199
A E+F + + +R RL VT ++++ R+G F+P+PG DR + + V G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGLDRARFAEAIAGNNAVFGLLD 68
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 258
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGIFALGILPFINASIIIQLLTAAIPSLENLQKNEGEQGRRKISQITRYV 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ +A +++V + L +A + + V+ TA L G+M + W + I+E G G G
Sbjct: 128 TVVWATIQSVAFSAIFLKQ--FALNPGIPFVLETAIALTAGSMFVMWASELITERGLGNG 185
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
+SL+I V I+ + L + + ++ L+ VF + + V V EG R++
Sbjct: 186 ASLLIFVNIVASLPKALGDTIDLVQVGGRETIGRVIVLILVFLVTIVGIVFVQEGIRRI- 244
Query: 379 LQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSP 435
+ SA R+ + E Y+P +N G+ P++ +L+ P ++A+ +
Sbjct: 245 ------PIISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFTRNTE 298
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V L+P G+ WVY +Y + F+ F
Sbjct: 299 IANIVNTYLSPG---GSGAWVYALVYLVSIVFFSYF 331
>gi|406907817|gb|EKD48524.1| hypothetical protein ACD_64C00264G0002 [uncultured bacterium]
Length = 440
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-----S 197
+L N F +++RR++ T ++++ RIG IP+ G D + + Q ++S SG S
Sbjct: 3 LLKNVLNIFKIADLRRKILFTFAVLIVYRIGNHIPVIGIDLQQL-QLFMSQKSGLGGLFS 61
Query: 198 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
++ G+ + + F LGI P I ASI+MQ+L +P+L QL KEG G + I Y +
Sbjct: 62 YLDMFSGGSLKQCTLFALGIMPYITASIMMQILSMSIPTLEQLSKEGEYGKKIINQYTRY 121
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
++LG +I+++ A Y + +M F L G++ + W+ + I+ G G
Sbjct: 122 LALGISIMQSFSYALVVENYGLVLDPGWAFRLMFM-FSLTIGSIVVMWLGEQIALHGIGS 180
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
GSS+II GI+ + + L Q + + L LL +F + V + +G RKV
Sbjct: 181 GSSMIIFAGIVARFPHDIITTL-QAVTDKIMDPVIALVLLAIFVGMAACIVFLEKGDRKV 239
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF- 436
+QY + YIPF IN +G+ PV+ + +L P +A+ L S F
Sbjct: 240 PVQYTRRIVGQRMYAGQ-----SSYIPFKINTAGIMPVIFSNAVLNVPLFVAAFLASRFT 294
Query: 437 -WQHVKEILNPETSV-GARPWVYYTIYAFF 464
++ + E L P V A +V ++FF
Sbjct: 295 LFKWISESLTPTGLVYNAIDFVLIIFFSFF 324
>gi|225076415|ref|ZP_03719614.1| hypothetical protein NEIFLAOT_01460 [Neisseria flavescens
NRL30031/H210]
gi|224952263|gb|EEG33472.1| hypothetical protein NEIFLAOT_01460 [Neisseria flavescens
NRL30031/H210]
Length = 437
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 14 GDLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+ IVPSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 74 IFAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + S H+ T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 134 TFVYQQGVVVTSSLEFHI-STVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGI 192
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 390
+ +ML+ S+ + ++G+ ++ +AVV E RKV + Y + S
Sbjct: 193 PSGIVRMLTLTEQGSMSMLMAVSIVIGILLLI--YAVVYFESAQRKVPVHYAKRQFGSGM 250
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
I ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 251 MPGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 289
>gi|365966993|ref|YP_004948555.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745906|gb|AEW76811.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 441
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHFLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|218779742|ref|YP_002431060.1| preprotein translocase subunit SecY [Desulfatibacillum alkenivorans
AK-01]
gi|218761126|gb|ACL03592.1| preprotein translocase, SecY subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 435
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 44/355 (12%)
Query: 143 VLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE- 200
++ ++ FK E++RR+ +TA L+ + RIG IP PG D + +F + D
Sbjct: 1 MVGGGFQNIFKIPELKRRVLITAGLLAVYRIGVHIPTPGVDGNALA----AFFAAHQDTI 56
Query: 201 LGDF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
LG F GA +LS F LGI P I ASI++Q+L ++P L +L KEG G +KI Y
Sbjct: 57 LGLFDMFSGGALERLSVFALGIMPYISASIILQLLTVVIPHLERLSKEGDAGRKKITQYT 116
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTI 310
+ ++ +I++ +A L +A V ++T L G + W+ +TI
Sbjct: 117 RYGTVLLSIIQGFGIAV-GLEQMASSAGEIVPVGGWSFRIMTVITLTAGTAFIMWLGETI 175
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI----VTMW 366
+E G G G SLII GI+ + K ++ L+G+ G LGVFT+ + M
Sbjct: 176 TERGIGNGISLIIFAGIVARGPAAVSKTIT-LIGA---------GTLGVFTVAGLAIFMV 225
Query: 367 AVV-----VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYL 421
AV+ V R++ +QY K R+ + ++P IN SG+ P + + L
Sbjct: 226 AVIGLIIFVETAQRRIPVQYA--KRVVGRRQYG---GQKTHLPLKINQSGVIPPIFASSL 280
Query: 422 LAFPSILASILGSPFWQHVKEILNPETSVGARPWV---YYTIYAFFVFLFNIFDI 473
+ FP+ +A G E L P T + P+V ++ Y + FN D+
Sbjct: 281 MMFPATIAQFSGIEALNKFAEWLTPGTGIWEIPYVAFIFFFCYFYTAVTFNPVDV 335
>gi|387769776|ref|ZP_10125973.1| preprotein translocase, SecY subunit [Pasteurella bettyae CCUG
2042]
gi|386905946|gb|EIJ70696.1| preprotein translocase, SecY subunit [Pasteurella bettyae CCUG
2042]
Length = 441
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKGRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +LG A L+A+ +
Sbjct: 76 SIFALGIMPYISASIIIQLLTTVYPALNELKKEGESGRRKISKYTRYATLGLATLQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + VF VT + V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARQGQMHLLVLLLIAVVVFA-VTYFVVFFERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWFGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 SP-----GQP-LYLIVYAIAIIFFSFF 329
>gi|224477200|ref|YP_002634806.1| preprotein translocase subunit SecY [Staphylococcus carnosus subsp.
carnosus TM300]
gi|229462805|sp|Q05217.2|SECY_STACT RecName: Full=Protein translocase subunit SecY
gi|222421807|emb|CAL28621.1| preprotein translocase SecY subunit [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 430
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 150/312 (48%), Gaps = 18/312 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 439
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 440 VKEILNPETSVG 451
+ NP +++G
Sbjct: 299 IANTANPSSNIG 310
>gi|167748450|ref|ZP_02420577.1| hypothetical protein ANACAC_03194 [Anaerostipes caccae DSM 14662]
gi|317472017|ref|ZP_07931349.1| preprotein translocase [Anaerostipes sp. 3_2_56FAA]
gi|167652442|gb|EDR96571.1| preprotein translocase, SecY subunit [Anaerostipes caccae DSM
14662]
gi|316900421|gb|EFV22403.1| preprotein translocase [Anaerostipes sp. 3_2_56FAA]
Length = 438
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 155/296 (52%), Gaps = 16/296 (5%)
Query: 144 LNNAAESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+ NA + FK+ E+R++L T +++++ R G +P+PG D + S + S + L
Sbjct: 1 MANALTNAFKNKELRKKLAFTVIILIVVRFGSQLPIPGIDTAQVTAYLKSTLGDSFNLLN 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F G+ L++S F L ++P I +SI+MQ++ +P+L +++K+G DG +KI ++++
Sbjct: 61 SFTGGSFLQMSVFALSVTPYITSSIIMQLMTIAIPALEEMQKDGEDGRKKIAKITRYVTV 120
Query: 261 GFAILEAVIVACYSLPYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
++E+ A ++ +S A H+ ++ L GA+ + W+ + I+E+G G
Sbjct: 121 VLGLIES---AGMTIGFSRSGALGPEHTNFTIVTMIIALTAGAILVMWLGERITENGIGN 177
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCR 375
G S+I+ + I++G + Y + +Q + + G + V ++ +++++ R
Sbjct: 178 GISIILLINIVSGMPKDFYALYNQFMKGKQIGPALIAGCVIAAVVLFTVVFVIILSDAER 237
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+ +QY + + + +IP +N +G+ P++ + ++ FP I+ +
Sbjct: 238 HIPVQY-----SKKVQGRKMVGGQSSHIPLKVNTAGVIPIIFASSIMQFPLIIQQL 288
>gi|357419506|ref|YP_004932498.1| protein translocase subunit secY/sec61 alpha [Thermovirga lienii
DSM 17291]
gi|355396972|gb|AER66401.1| protein translocase subunit secY/sec61 alpha [Thermovirga lienii
DSM 17291]
Length = 431
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 20/332 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+LN ++F +++RR+ T ++ I R+G IP PG D + + F GS
Sbjct: 1 MLNAMKDAFRLPDLKRRILFTLAVLFIYRLGAHIPTPGIDTEAMAR---LFGEGSALNFL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA + S F LG++P I ASI+MQ+L I P+L +L+KEG G +KI Y +
Sbjct: 58 DLFAGGALRRFSIFALGVAPYINASIVMQLLVVIFPALEKLQKEGEQGRKKIVQYTRLGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ FA ++A+ + + ++ S SV +M+ + G++ + W+ + +S+ G G G
Sbjct: 118 VFFAAVQALGMTFWLRNLGVF--SGSVLDMMIVVITITTGSVVVMWLGEEVSDHGIGNGI 175
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I GI+ E + + S + + + +L + V +V V++ EG R++ +
Sbjct: 176 SLLIFAGIVARIPEAIVRTWSMVRLGEMSFL-VLLIAIIVMVVVVAGCVLLQEGQRRLPV 234
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY A + +IP +N +G+ P++ + +L FP +
Sbjct: 235 QY-----AKRVVGNKVYGGQSTFIPLRVNQAGVIPIIFASSVLLFPYTVTRFFSGDIASK 289
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++ IL+P + VY +Y + F+ F
Sbjct: 290 IQAILSPGSV------VYMVLYVGLIIFFSYF 315
>gi|262038241|ref|ZP_06011631.1| preprotein translocase, SecY subunit [Leptotrichia goodfellowii
F0264]
gi|261747708|gb|EEY35157.1| preprotein translocase, SecY subunit [Leptotrichia goodfellowii
F0264]
Length = 432
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 172/341 (50%), Gaps = 18/341 (5%)
Query: 140 LSSVLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 198
L+ + N +S FK E+++R+ T V+ I+RIG I +PG + + ++G +
Sbjct: 3 LTEAIVNRIQSIFKIPELKKRVAFTLVMFAIARIGVHIAVPGINMAAFKNFQNNAIAGFL 62
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ L GA + S F LGI P I +SI+ Q+L I P + +++KEG +KI + ++
Sbjct: 63 N-LFSGGAVQRASIFSLGIIPYINSSIVFQLLGVIFPKIDEMQKEGGKERDKITQWTRYV 121
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ AI ++ +A + K ++ T L+ G + WI + IS G G G
Sbjct: 122 TIILAIAQSFGIAITLINQPGLVVEPGPKFIISTMALMTGGTAFLMWISERISIRGIGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SS++I +GI+ + + +M+S S++ + F L ++ +F ++ V + R++
Sbjct: 182 SSMLIFLGIVVNLPQVIQQMVS----SNINFIFFGLSII-LFVVIIALMVDIQLAERRIP 236
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFW 437
+QY G S + Y+P IN +G+ P++ + L+A P + +L + FW
Sbjct: 237 IQYAGKGSLGFGGGQSAVGR-RTYLPLKINTAGVMPIIFASVLMAAPPFIVQMLKANAFW 295
Query: 438 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
Q K+ +T V +Y ++AF + +F+ F ++I +
Sbjct: 296 Q--KQF--SQTGV-----LYLLLFAFLIIVFSFFYTLTIAF 327
>gi|283457569|ref|YP_003362152.1| preprotein translocase subunit SecY [Rothia mucilaginosa DY-18]
gi|283133567|dbj|BAI64332.1| preprotein translocase subunit SecY [Rothia mucilaginosa DY-18]
Length = 435
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 21/287 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF---GAELK 209
+++RR+L T +IV+ R+G FIP PG + Q + V SG V ++ + GA L+
Sbjct: 12 ADLRRKLLFTLAMIVLYRVGTFIPAPGVSYGNVQQCLNANVTSGGVYDIVNLFSGGALLQ 71
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 270 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ + + V H+++ L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILLIIVTLCAGTTVIMWMGEQITERGVGNGMSLLI 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
I + + L + W + G+ +V + V V + R++ +QY
Sbjct: 192 FTSIASSFPSALGSI------QRTHGWGIFAAVCGIGLLVMLAVVYVEQSVRRIPVQY-- 243
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A I YIP +N +G+ P++ + LL P ++A
Sbjct: 244 ---AKRMIGRRTIGGTSTYIPLKVNMAGVIPLIFASSLLTLPGLIAQ 287
>gi|240145858|ref|ZP_04744459.1| preprotein translocase, SecY subunit [Roseburia intestinalis L1-82]
gi|257202006|gb|EEV00291.1| preprotein translocase, SecY subunit [Roseburia intestinalis L1-82]
gi|291535447|emb|CBL08559.1| protein translocase subunit secY/sec61 alpha [Roseburia
intestinalis M50/1]
gi|291537910|emb|CBL11021.1| protein translocase subunit secY/sec61 alpha [Roseburia
intestinalis XB6B4]
Length = 438
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 151/299 (50%), Gaps = 16/299 (5%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F +IR R+ T +++V+ RIG +P+PG + L F S + D +G
Sbjct: 1 MLETLRNAFKIKDIRNRIIFTFLMLVVIRIGSQLPIPGVNNELFSN---WFASQTADGMG 57
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F G+ +S F L I+P I +SI+MQ+L +P L +++++G +G +KI +
Sbjct: 58 FFDAITGGSFYNMSIFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEEGRKKIAEITRY 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+++ A++EA+ +A S S + +++ F L G+ + WI + I+E G G
Sbjct: 118 LTVALALIEAIAMAI-SFKRGQMLQSDGILTIIMVIFTLTAGSAVLMWIGERITEKGVGN 176
Query: 318 GSSLIICVGILTGYTETLYKMLSQLL-GSSV-RWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G S+++ + I++ + + Q + G S+ + + ++ + + ++ V + G R
Sbjct: 177 GISIVLTINIISRVPNDMGTLYQQFITGKSIPKGILAAVIIIAIIVAMVVFVVFLQGGER 236
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
++ +QY + + + YIP +N G+ PV+ LL P I+AS+LG
Sbjct: 237 RIPVQY-----SKKIQGRKQVGGQSTYIPLKVNTGGVIPVIFAQSLLQTPVIIASLLGK 290
>gi|113460229|ref|YP_718286.1| preprotein translocase subunit SecY [Haemophilus somnus 129PT]
gi|112822272|gb|ABI24361.1| protein translocase subunit secY/sec61 alpha [Haemophilus somnus
129PT]
Length = 441
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 27/329 (8%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE++ RL FV LIV RIG FIP+PG D ++ Q L G++ ++ + GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQ-LLEQQKGTIIDMFNMFSGGALSR 74
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A ++A+
Sbjct: 75 ASIFALGIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLALATIQAIG 134
Query: 270 VAC---YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
++ LP + S V + LV G M + W+ + I+E G G G SLII G
Sbjct: 135 ISTGLPNMLPGLVPNLGFSFYFTAVIS--LVTGTMFLMWLGEQITERGIGNGISLIIFAG 192
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + + Q + +L + VF VT + V G R++K++Y
Sbjct: 193 IVAGLPSAIGQTIEQARQGQMHLLVLLLIAVIVFA-VTYFVVFFERGQRRIKVEY----- 246
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKE 442
A + + ++P +N +G+ P + + ++ FP+ L S G + +
Sbjct: 247 AKRQQGRQIVGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTSWFGQGSNLEWLTELSL 306
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L+P +P +Y +YA + F+ F
Sbjct: 307 LLHP-----GQP-LYLIVYAVAIIFFSFF 329
>gi|255326863|ref|ZP_05367939.1| preprotein translocase, SecY subunit [Rothia mucilaginosa ATCC
25296]
gi|422324327|ref|ZP_16405364.1| preprotein translocase subunit secY [Rothia mucilaginosa M508]
gi|255296080|gb|EET75421.1| preprotein translocase, SecY subunit [Rothia mucilaginosa ATCC
25296]
gi|353344383|gb|EHB88695.1| preprotein translocase subunit secY [Rothia mucilaginosa M508]
Length = 435
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 21/287 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF---GAELK 209
+++RR+L T +IV+ R+G FIP PG + Q + V SG V ++ + GA L+
Sbjct: 12 ADLRRKLLFTLAMIVLYRVGTFIPAPGVSYGNVQQCLNANVTSGGVYDIVNLFSGGALLQ 71
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 270 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ + + V H+++ L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILLIIVTLCAGTTVIMWMGEQITERGVGNGMSLLI 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
I + + L + W + G+ +V + V V + R++ +QY
Sbjct: 192 FTSIASSFPSALGSI------QRTHGWGIFAAVCGIGLLVMLAVVYVEQSVRRIPVQY-- 243
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A I YIP +N +G+ P++ + LL P ++A
Sbjct: 244 ---AKRMIGRRTIGGTSTYIPLKVNMAGVIPLIFASSLLTLPGLIAQ 287
>gi|399155796|ref|ZP_10755863.1| preprotein translocase subunit SecY [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 442
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 155/315 (49%), Gaps = 24/315 (7%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
N ++ F+ E+R+R+F T ++ I R+G IP PG D + + GS+ D
Sbjct: 3 NIIQNIFRIEELRQRIFFTLAMLFIFRLGAHIPTPGIDGAAL-TAFFEAQQGSILRFFDM 61
Query: 205 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL- 260
GA +L+ F LG+ P I ASI++Q+L + P L +L KEG G +KI SY + ++
Sbjct: 62 FTGGALARLTVFALGVMPYISASIIIQLLTAVFPYLERLSKEGDAGRKKITSYTRYGTIV 121
Query: 261 -----GFAI---LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
GFAI LE+ + A P I S + T L G + W+ + ISE
Sbjct: 122 LSVVQGFAIAVGLES-MAAPNGQPIVISTLSPWAFRAL-TVITLTAGTAFLMWVGEQISE 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I GI+ G + + +L+ +V P +L ++G+ IV ++ V+ E
Sbjct: 180 RGIGNGISLLIFAGIVVGIPGAIINSV-RLVQDNV-LSPLVLAVVGILMIVVVFLVIFAE 237
Query: 373 GC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
RK+ +QY A + + ++P IN +G+ P + + +LAFP+ +
Sbjct: 238 TAYRKIPVQY-----AKRMQGNRMYGGQSSHLPLKINTAGVIPPIFASSILAFPATITGF 292
Query: 432 LGSPFWQHVKEILNP 446
+ P+ Q V L P
Sbjct: 293 IAVPWVQAVGSQLLP 307
>gi|416079367|ref|ZP_11586181.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444338533|ref|ZP_21152360.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348003005|gb|EGY43662.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544923|gb|ELT54811.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 441
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALGRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHFLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|161611306|ref|YP_007429.2| preprotein translocase subunit SecY [Candidatus Protochlamydia
amoebophila UWE25]
Length = 456
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 153/303 (50%), Gaps = 36/303 (11%)
Query: 169 ISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGDFGAELKLSFFQLGISPQIVA 223
+ R+G FIP+PG + + + GS + ++ GA +++ LG++P I A
Sbjct: 27 VCRLGSFIPVPGINGEVAVSFFRHATGGSQNLFQMVDIFSGGAFSQMTVIALGVTPYISA 86
Query: 224 SILMQVLCHIVPSLVQ-LRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 282
SI+MQ+L +VPSL + LR+ G G KI + ++++ + L++ + A Y+L ++
Sbjct: 87 SIIMQLLVALVPSLQRDLRENGDAGKRKINRWTRFLTIVLSFLQSALFAKYALQINLSRP 146
Query: 283 SHSVKHVM-VTAFLL------------VCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ +TAF L G M + W+ + I+E G G G SLIIC+GIL+
Sbjct: 147 GIVAGELLDITAFGLPWLFYLITIATMTTGTMFLMWVGEQITERGIGNGISLIICLGILS 206
Query: 330 GYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
+ + QL S + +L L+ VF +VT+ ++V +G R++ LQ+
Sbjct: 207 QIPTAMGLIFQQLNLDSQEPGQMNFSTILVLISVFVVVTLATILVIQGHRRIPLQH---- 262
Query: 386 LASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
AR EV+ YIP IN +G+ PV+ + LL FP+ L + +G W + E
Sbjct: 263 ----ARRVVGRKEVQGGSSYIPLKINYAGVIPVIFASSLLMFPATLGTFVGRGNW--LGE 316
Query: 443 ILN 445
+ N
Sbjct: 317 VAN 319
>gi|256390256|ref|YP_003111820.1| preprotein translocase subunit SecY [Catenulispora acidiphila DSM
44928]
gi|256356482|gb|ACU69979.1| preprotein translocase, SecY subunit [Catenulispora acidiphila DSM
44928]
Length = 449
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 26/305 (8%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF-DRRLIPQDYLSFVSGSVDE------L 201
+F E+R++L T ++ + R G IPLPG R L S SG+ + L
Sbjct: 7 RAFRTPELRKKLLFTLAIMAVYRFGAHIPLPGVATRNLATCTGASSTSGTGSQAFGLLNL 66
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F LGI+P I ASI++Q+L +VP L L+KEG G KI Y ++++G
Sbjct: 67 FSGGAFLQLSIFALGITPYITASIILQLLTVVVPRLEALKKEGQAGQAKITQYTRYLTIG 126
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMS---WICDT 309
++LE+ + + Y + V V TA +++ S W+ +
Sbjct: 127 LSVLESTMTLTAARNNPGYLLGQRCQGVQVFYPTVTWEGTAVMVIIMTAATSLLMWLGEL 186
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
+++ G G G S+++ I + +L+ + +L ++ WP +L + ++ V
Sbjct: 187 VTDRGVGNGMSVLMFTSIAARFPGSLWAI--KLSSHTLNGWPVFFAVLALGVLIVAAVVF 244
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V +G R++ +QY + A YIP +N G+ PV+ + LL P +L
Sbjct: 245 VEQGQRRIPVQYTKRMIGRRAYGGG-----STYIPLKLNQPGVVPVIFASSLLQMPVMLV 299
Query: 430 SILGS 434
+ G
Sbjct: 300 GLTGG 304
>gi|75906932|ref|YP_321228.1| preprotein translocase subunit SecY [Anabaena variabilis ATCC
29413]
gi|75700657|gb|ABA20333.1| protein translocase subunit secY/sec61 alpha [Anabaena variabilis
ATCC 29413]
Length = 437
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 27/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVD 199
A E+F + + +R RL VT ++++ R+G F+P+PG DR + S + G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSNNAIFGLLD 68
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 258
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYV 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++G+AI +++ A +L +A V TA L G+M + W + I+E G G G
Sbjct: 128 TVGWAIFQSL--AFSALFLQQFALQPGPVFVAETAIALTAGSMFVMWASELITERGIGNG 185
Query: 319 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG R+
Sbjct: 186 ASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIVGI--VFVQEGIRR 243
Query: 377 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + SA R+ + E Y+P + G+ P++ +L+ P ++A+ +
Sbjct: 244 I-------PIISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANFTKN 296
Query: 435 PFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P + V L+P G+ WVY +Y + F+ F
Sbjct: 297 PELANIVNTYLSPG---GSGSWVYALVYLISIVFFSYF 331
>gi|384253976|gb|EIE27450.1| SecY protein [Coccomyxa subellipsoidea C-169]
Length = 485
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 155/341 (45%), Gaps = 35/341 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVS--GSVDELGDFGAE- 207
++ +R+ +T + + ++R+G FIPLPG + ++ S + G +E FGA+
Sbjct: 31 QLLQRIALTVLFLALARVGQFIPLPGVNLAAVASAAAGEHCSALGTGGGFEE--AFGADS 88
Query: 208 LKLSFFQLGISPQIVAS------ILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
+ FQLGI P I AS +L+++ I L QLR+ G +G IK Y SL
Sbjct: 89 ASVGIFQLGIGPYIDASWTLSLILLLKIPQEIYVHLQQLRRAGREGAAVIKMYTQVGSLL 148
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FA++ A P++I A + H M T LV GAM + ++CD + G G G SL
Sbjct: 149 FAVVLGAKRAVELRPHAIAPAGF-LTHTMAT---LVAGAMLLRFVCDQNEDHGLGDGISL 204
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+IC G+ GY L ++ L ++V W + + AV VT+ +++ L Y
Sbjct: 205 LICAGMAAGYAAKLRQLPGLLAAAAVPAWKLGAAVSACLALAYA-AVYVTQIEKRLPLVY 263
Query: 382 YGFKLASAAREDSPIT------EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
Y + + +P Y+P I PSGM P+L +++ + + + P
Sbjct: 264 YKRRTEELGKRRAPSQLPAKPPRTTDYLPLRIAPSGMGPLLMASFVFYMSPQVVAFVSPP 323
Query: 436 FWQHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIFDIVS 475
+ L NP PW + FVF+ I D S
Sbjct: 324 AAARMAAFLFNPAV----LPWS----FGLFVFMTMILDFSS 356
>gi|83591256|ref|YP_431265.1| preprotein translocase subunit SecY [Moorella thermoacetica ATCC
39073]
gi|83574170|gb|ABC20722.1| protein translocase subunit secY/sec61 alpha [Moorella
thermoacetica ATCC 39073]
Length = 420
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 40/343 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A ++ ++R+++F T ++ V+ R+G +P+PG + ++ + + G+ G
Sbjct: 1 MLDTLASAWKLEDLRKKIFFTLLMFVVFRLGAHVPVPGINNAILKE-----LIGTGTIFG 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F GA + + F +GI P I ASI+MQ+L ++P+L +L KE ++G +KI Y +
Sbjct: 56 FFDVISGGAFKRFTIFAMGIMPYINASIIMQLLTVVIPALERLAKEDIEGRKKIVQYTRY 115
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHS-----VKHVMVTAFLLVCGAMTMSWICDTISE 312
++ +IL+A+ + Y A SH+ + + +V +L G + W+ + I+E
Sbjct: 116 GTVILSILQALGMGLY------LARSHAFLRPGLYNYLVVVIMLTAGTTFLMWMGEQITE 169
Query: 313 SGFGQGSSLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
G G G SLII GI L +LY+ ++ + + F + V ++ V
Sbjct: 170 KGIGNGISLIIFAGIVSRLPAGAASLYQYVTSGTVNIISLLVFAI----VAVLIIAAVVA 225
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V EG R++ +QY A +IP +N +G+ PV+ +L FPS LA
Sbjct: 226 VQEGERRIAVQY-----AKRVVGRRVYGGQSTHIPLKVNQAGVIPVIFAMSILLFPSTLA 280
Query: 430 SIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S S Q + +P R Y +YA + F F
Sbjct: 281 SWFPQSSLAQTIVRFFDP------RSAFYMILYALLIIFFTYF 317
>gi|407457665|ref|YP_006735970.1| preprotein translocase subunit secY [Chlamydia psittaci WS/RT/E30]
gi|405784560|gb|AFS23306.1| preprotein translocase subunit secY [Chlamydia psittaci WS/RT/E30]
Length = 457
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMAIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + V +L+P + WVY + Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYF 342
>gi|394989446|ref|ZP_10382279.1| preprotein translocase subunit SecY [Sulfuricella denitrificans
skB26]
gi|393790946|dbj|GAB71918.1| preprotein translocase subunit SecY [Sulfuricella denitrificans
skB26]
Length = 443
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 143/298 (47%), Gaps = 13/298 (4%)
Query: 141 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 200
+S+L+ A F +R LFV A L+V RIG FIP+PG D + + + G +
Sbjct: 6 NSLLSAAGAGKFGDLKKRLLFVLAALVVY-RIGTFIPVPGIDPMALESLFKTQSGGILGM 64
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
F GA + S F LGI P I ASI+MQ++ + P L QL+KEG G +KI Y +
Sbjct: 65 FNMFSGGALSRFSVFALGIMPYISASIIMQLMTVVSPQLEQLKKEGESGRKKITQYTRYG 124
Query: 259 SLGFAILE--AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++ A+ + + +A S P + + V LV G M + W+ + I+E G G
Sbjct: 125 TVFLALFQGLGISIALESQPGLVIEPGLLFRLTAVAT--LVTGTMFIMWLGEQITERGIG 182
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SLII GI G + L +L + P +L L V VT + V V G RK
Sbjct: 183 NGISLIIFAGIAAGLPHAIGGTL-ELTRTGAFSIPLVLMLFVVAIGVTAFVVFVERGQRK 241
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + Y ++ + ++P +N SG+ P + + ++ FP+ LA GS
Sbjct: 242 ILVNYAKRQVGNKIYGGQ-----SSHLPLKLNMSGVIPPIFASSIILFPATLAGWFGS 294
>gi|407454932|ref|YP_006733823.1| preprotein translocase subunit secY [Chlamydia psittaci GR9]
gi|407460283|ref|YP_006738058.1| preprotein translocase subunit secY [Chlamydia psittaci WC]
gi|449070755|ref|YP_007437835.1| preprotein translocase subunit SecY [Chlamydophila psittaci Mat116]
gi|405781475|gb|AFS20224.1| preprotein translocase subunit secY [Chlamydia psittaci GR9]
gi|405786678|gb|AFS25422.1| preprotein translocase subunit secY [Chlamydia psittaci WC]
gi|449039263|gb|AGE74687.1| preprotein translocase subunit SecY [Chlamydophila psittaci Mat116]
Length = 457
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMAIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + V +L+P + WVY + Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYF 342
>gi|347543055|ref|YP_004857693.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346986092|dbj|BAK81767.1| preprotein translocase, SecY subunit [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 424
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 157/301 (52%), Gaps = 22/301 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+L NA F ++R+R+F T ++++ R+G FIP+PG + + Q + + G D +
Sbjct: 3 KILGNA---FKVKDLRKRIFFTLFIVIVFRLGNFIPVPGVNTESLKQLTSTGLFGFYDLI 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA + S F LG+ P I +SI++Q+L +P QL KEG +G +K+++ ++S+
Sbjct: 60 SG-GALERFSIFALGVVPYINSSIIVQLLSMSIPKFEQLSKEGEEGRKKLQNITRYLSIV 118
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMV-TAFLLVCGAMTMSWICDTISESGFGQGSS 320
+ ++A Y L + A +++ M+ F LV ++ + WI D +S G G G S
Sbjct: 119 LSFVQA--YGSYFLILNAGAITNNSMFSMIFVVFTLVAASVFLVWIGDQVSLHGIGNGVS 176
Query: 321 LIICVGILTGYTETLYKMLSQLLGSS----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
L I V I++ + T++ + L S + F+L +G+ +W + +T R+
Sbjct: 177 LFIFVNIVSRF-PTMFIQIGALNKSGEVGFIETVIFVLVAIGLL----IWTIYMTLAERR 231
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY G +LA + + + + +IPF+I S + ++ T +L FP+ + + +
Sbjct: 232 ITVQYAGKQLAGSNKNN------KAHIPFSITGSAVIAIIFATSVLQFPATIGTFFSADS 285
Query: 437 W 437
W
Sbjct: 286 W 286
>gi|345877725|ref|ZP_08829464.1| 30S ribosomal protein S11 [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225255|gb|EGV51619.1| 30S ribosomal protein S11 [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 447
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 22/341 (6%)
Query: 141 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 200
S++LN+ +E+R+RL A +++ RIG FIP+PG + + + +D
Sbjct: 6 SAMLNSLGGMGRLTELRQRLLFVAGALLVFRIGTFIPVPGVNPVALAALFEQAQGSILDM 65
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
F GA + S F LGI P I ASI+MQ++ ++P L QL+KEG G KI Y +
Sbjct: 66 FNMFSGGALERASLFALGIMPYISASIIMQLMTSVLPKLEQLKKEGEAGRRKITQYTRYG 125
Query: 259 SLGFAILEAVIVACYSLPYSIYA----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++ A +AV ++ SI A V V+ A LV G M + W+ + I+E G
Sbjct: 126 TVVLASFQAVGISIALQSQSIGGQSVVAQQGVGFVVTAAVSLVTGTMFLMWLGEQITERG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+II GI+ G + L + ++ L + VT + V V G
Sbjct: 186 IGNGISMIIFAGIVAGLPSAIGGTLELARTGELNVLTILV-LFALAIAVTGFVVFVERGQ 244
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ + Y A + + ++P +N +G+ P + + ++ FP+ L G+
Sbjct: 245 RRITVNY-----AKRQQGRRLMQAQSSHLPLKLNMAGVIPPIFASSIILFPATLGQWFGN 299
Query: 435 P----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q + L+P P VY YA + F F
Sbjct: 300 SEETRWLQDIFSKLSP-----GEP-VYVMAYAAAIIFFCFF 334
>gi|59802140|ref|YP_208852.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA 1090]
gi|293398182|ref|ZP_06642387.1| preprotein translocase, SecY subunit [Neisseria gonorrhoeae F62]
gi|59719035|gb|AAW90440.1| putative preprotein translocase SecY subunit [Neisseria gonorrhoeae
FA 1090]
gi|291611445|gb|EFF40515.1| preprotein translocase, SecY subunit [Neisseria gonorrhoeae F62]
Length = 436
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 145/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ A S ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 AKRQFNGRAGSQS------THMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|260577159|ref|ZP_05845136.1| preprotein translocase, SecY subunit [Rhodobacter sp. SW2]
gi|259020633|gb|EEW23952.1| preprotein translocase, SecY subunit [Rhodobacter sp. SW2]
Length = 452
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 147/285 (51%), Gaps = 13/285 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+++R+R+F T L+++ R+G +IP+PG D + +++++ V + + + GA ++
Sbjct: 21 TDLRQRIFFTVGLLIVYRLGTYIPVPGIDGTAL-REFMANVGAGIGGILNMFTGGAISRM 79
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q++ ++P+L QL+KEG G +KI Y + ++ A +A +
Sbjct: 80 GIFALGIMPYISASIIVQLMTSMLPALEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGI 139
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A SL A + + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 140 AM-SLEAGDLAQDPGLYFRLAVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAE 198
Query: 331 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
L + SQ G S P ++G+L + V + V + RK+ +QY ++
Sbjct: 199 IPRALAQFFSQ--GRSGALSPAVIIGVLVMVVAVIAFVVFMERALRKIHIQYPRRQVGMK 256
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P +++ G+
Sbjct: 257 VYDGG-----SSHLPIKVNPAGVIPAIFASSLLLLPITVSTFSGA 296
>gi|297545310|ref|YP_003677612.1| preprotein translocase subunit SecY [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843085|gb|ADH61601.1| preprotein translocase, SecY subunit [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 418
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 20/295 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
+IR+R+ T V++VI R+G IP+PG D ++I + G G F GA
Sbjct: 12 DDIRKRILYTVVMLVIFRLGSHIPVPGIDSKVIAN-----ILGQGQLFGFFDIISGGAFS 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ F + I+P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 SFTIFAMSITPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ I S+ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLRKAVINPTFFSLTVIVIT---LTAGTAFLMWLGERITENGIGNGSSLIIFAGII 183
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ +Y + + + + ++ ++ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIYMTAEYVRAGTANIFGAIAFVVAELLMIVL-IILATEGQRRIPVQY-----AK 237
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKE 442
+IP IN +G+ P++ LL FP LA+ S F+ V+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQR 292
>gi|402832960|ref|ZP_10881583.1| preprotein translocase, SecY subunit [Selenomonas sp. CM52]
gi|402281703|gb|EJU30329.1| preprotein translocase, SecY subunit [Selenomonas sp. CM52]
Length = 418
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 147/285 (51%), Gaps = 17/285 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F +G++ L D GA K S
Sbjct: 13 ELRQKVIFTLIMFAVFRLGTHIPVPGVDPSAIEQ---LFATGNLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I ASI+MQ+L ++P+L Q KEG +GH+K ++++ A +AV ++
Sbjct: 70 IFAMSITPYINASIIMQLLTVVIPTLEQWSKEGQEGHKKTTKVTRYLTVALAFFQAVGMS 129
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L +I + + +++ A L G + + WI + I+ +G G G SLII GI+
Sbjct: 130 I-GLKQAIL--NPNPVSILIIAITLTGGTIFLMWIGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ L + S L ++ ++ F+ ++ + IV + + + EG R+V + Y +
Sbjct: 187 PKNLGTIYSYLQAGTISYFNAFVFAVIALLMIV--FVIYIQEGNRRVPISYAKRVVGKKT 244
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
S +IP +N +G+ P++ + +L FP +A + P
Sbjct: 245 YGGS-----SSHIPLKVNHAGVIPIIFASSVLMFPVTVAQFIEVP 284
>gi|329942429|ref|ZP_08291239.1| preprotein translocase subunit secY [Chlamydophila psittaci Cal10]
gi|332287070|ref|YP_004421971.1| preprotein translocase subunit [Chlamydophila psittaci 6BC]
gi|384450209|ref|YP_005662809.1| preprotein translocase subunit SecY [Chlamydophila psittaci 6BC]
gi|384451217|ref|YP_005663815.1| preprotein translocase subunit [Chlamydophila psittaci 01DC11]
gi|384452193|ref|YP_005664790.1| preprotein translocase subunit SecY [Chlamydophila psittaci 08DC60]
gi|384453167|ref|YP_005665763.1| preprotein translocase subunit [Chlamydophila psittaci C19/98]
gi|384454145|ref|YP_005666740.1| preprotein translocase subunit [Chlamydophila psittaci 02DC15]
gi|392376323|ref|YP_004064101.1| putative preprotein translocase SecY subunit [Chlamydophila
psittaci RD1]
gi|406591928|ref|YP_006739108.1| preprotein translocase subunit secY [Chlamydia psittaci CP3]
gi|406593039|ref|YP_006740218.1| preprotein translocase subunit secY [Chlamydia psittaci NJ1]
gi|406594114|ref|YP_006741262.1| preprotein translocase subunit secY [Chlamydia psittaci MN]
gi|407453598|ref|YP_006732706.1| preprotein translocase subunit secY [Chlamydia psittaci 84/55]
gi|407456296|ref|YP_006734869.1| preprotein translocase subunit secY [Chlamydia psittaci VS225]
gi|410858098|ref|YP_006974038.1| putative preprotein translocase SecY subunit [Chlamydia psittaci
01DC12]
gi|313847666|emb|CBY16654.1| putative preprotein translocase SecY subunit [Chlamydophila
psittaci RD1]
gi|325506686|gb|ADZ18324.1| preprotein translocase subunit [Chlamydophila psittaci 6BC]
gi|328815339|gb|EGF85327.1| preprotein translocase subunit secY [Chlamydophila psittaci Cal10]
gi|328914303|gb|AEB55136.1| preprotein translocase, SecY subunit [Chlamydophila psittaci 6BC]
gi|334691948|gb|AEG85167.1| preprotein translocase subunit [Chlamydophila psittaci C19/98]
gi|334692927|gb|AEG86145.1| preprotein translocase subunit [Chlamydophila psittaci 01DC11]
gi|334693902|gb|AEG87119.1| preprotein translocase subunit [Chlamydophila psittaci 02DC15]
gi|334694882|gb|AEG88098.1| preprotein translocase, SecY subunit [Chlamydophila psittaci
08DC60]
gi|405780357|gb|AFS19107.1| preprotein translocase subunit secY [Chlamydia psittaci 84/55]
gi|405782546|gb|AFS21294.1| preprotein translocase subunit secY [Chlamydia psittaci MN]
gi|405783557|gb|AFS22304.1| preprotein translocase subunit secY [Chlamydia psittaci VS225]
gi|405787800|gb|AFS26543.1| preprotein translocase subunit secY [Chlamydia psittaci CP3]
gi|405788911|gb|AFS27653.1| preprotein translocase subunit secY [Chlamydia psittaci NJ1]
gi|410810993|emb|CCO01636.1| putative preprotein translocase SecY subunit [Chlamydia psittaci
01DC12]
Length = 457
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMAIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + V +L+P + WVY + Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYF 342
>gi|396585501|ref|ZP_10485910.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM47]
gi|395546702|gb|EJG14286.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM47]
Length = 430
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 25/339 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+ IL+A + ++ + +V ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCSEPVIRDQTVLTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLVVAIAVVYVEQ 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY K R+ T YIP IN +G+ PV+ + +LA P ++A
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMAGVIPVIFASSILALPPMIAQ-F 288
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G P V+ I T Y TIY+ F F
Sbjct: 289 GKPQDAWVQWISGHFTQGST---FYLTIYSLMTLFFAFF 324
>gi|392392101|ref|YP_006428703.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390523179|gb|AFL98909.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 429
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 161/335 (48%), Gaps = 41/335 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
EIR ++ T ++ ++ RIG IP+P I D LS + GS L DF G+
Sbjct: 14 EIRTKIGFTLLMFLVFRIGAHIPIP-----FINHDVLSNMLGS-GTLYDFLDTFSGGSFR 67
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IWWI 258
+ S F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y I
Sbjct: 68 RFSVFALSITPYITASIILQLLTIVIPSLERLAKEGEFGRKKITQYTRYGTVILGFIQGF 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+ F + A+I+ + + IY ++ A +L G + W+ + I+E+G G G
Sbjct: 128 GMTFGLRGALIIPKAGMEWLIY---------LLVALILTAGTAFLMWLGERITENGIGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SLII GI+ G + + ++ L + + +LGL+ + + V + EG R+++
Sbjct: 179 ISLIIFAGIVAGVPDAIKRIAGLLNVGEITLFS-VLGLIVIGLGIIAGVVFIQEGQRRIQ 237
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 436
+QY A +IP +N +G+ P++ LLAFPS +A+ + S +
Sbjct: 238 VQY-----AKRVVGRRVYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMPSTSGY 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q V + L S+ + P Y +YA + F F
Sbjct: 293 VQFVNKWLVMNGSLTSIP--YLIVYAMLIIFFTYF 325
>gi|426404867|ref|YP_007023838.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425861535|gb|AFY02571.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 442
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 19/318 (5%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
+A ES K S++R+R+ T L+ I RIG +P PG D + + + G F
Sbjct: 2 SAIESIAKNSDLRKRILFTLALLAIYRIGVHVPTPGVDGSAVLSFFQAQSRGIFGLFNTF 61
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA + S F LGI P I +SI+ Q+L +P L L+KEG G KI Y + ++
Sbjct: 62 TGGALSQFSIFALGIMPYISSSIIFQLLTSAIPYLEALKKEGEQGRRKINQYTRYATVAL 121
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---------LVCGAMTMSWICDTISES 313
AI++ ++ + L S H + AFL L G + W+ + I+E
Sbjct: 122 AIIQGYGISTW-LMNSTSPDGHPLVIAPTVAFLPFQIMTIITLTAGTCFIMWLGEQITER 180
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE- 372
G G G+SLII GI + ++ + +R+ ++ LL F + + AV+ E
Sbjct: 181 GIGNGTSLIIFTGIAAAIPGGVQQLWELVRTGEMRFA--LVLLLVAFMVAIIAAVIYMEV 238
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + T ++P +N SG+ P + + LL FP+ +A +
Sbjct: 239 AQRRITVQYSQRQGGGGMQSMQTPTS---HLPIKLNISGVIPPIFASSLLMFPATMAQFV 295
Query: 433 GSPFWQHVKEILNPETSV 450
+P+ + +++ LNP ++
Sbjct: 296 NTPWLKALQDSLNPSGTI 313
>gi|49189|emb|CAA49691.1| secY [Staphylococcus carnosus]
Length = 430
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 150/312 (48%), Gaps = 18/312 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTSMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 439
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 440 VKEILNPETSVG 451
+ NP +++G
Sbjct: 299 IANTANPSSNIG 310
>gi|160881765|ref|YP_001560733.1| preprotein translocase subunit SecY [Clostridium phytofermentans
ISDg]
gi|160430431|gb|ABX43994.1| preprotein translocase, SecY subunit [Clostridium phytofermentans
ISDg]
Length = 442
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 161/321 (50%), Gaps = 26/321 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F +IR +L T ++++I R+G +P+PG ++ +I + + L
Sbjct: 1 MLKTVRNAFKIKDIRNKLLFTFMVLIIVRLGSQLPVPGVNQAVIANWLQNNFGSGLSFLD 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F G+ ++S F LGI P I +SI+MQ+L +P L +++K+G G +KI ++++
Sbjct: 61 SFTGGSFTRMSLFALGIGPYITSSIIMQLLTIAIPKLEEMQKDGESGRKKIAEISRYVTI 120
Query: 261 GFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
G +I+E+V +V +S ++ V++TA G+ + W+ + I+E G G G
Sbjct: 121 GLSIIESVAMVIGFSGSGALEGGLTFTNIVVITA-SFTAGSAILMWLGERITEKGVGNGI 179
Query: 320 SLIICVGILTGYTETLYKMLSQ-LLGSSVRWWPFMLGLLGVFTIVT------MWAVVVTE 372
S+I+ + I+ +Y ++ + +LG SV + G+ IV + +++
Sbjct: 180 SVILLINIVANMPRDIYGLIEKFVLGESV-----VKGVTAAIIIVAVILLSVVLIILLNA 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
RK+ +QY A + + +IP +N +G+ PV+ ++ FP I+AS
Sbjct: 235 AQRKIAVQY-----AKKVQGRKMVGGQSSHIPLKVNTAGVIPVIFAVSIMQFPIIIASFF 289
Query: 433 G-----SPFWQHVKEILNPET 448
G + FW V +LN ++
Sbjct: 290 GVQPARAYFWPKVLHMLNSQS 310
>gi|261378061|ref|ZP_05982634.1| preprotein translocase, SecY subunit [Neisseria cinerea ATCC 14685]
gi|269145511|gb|EEZ71929.1| preprotein translocase, SecY subunit [Neisseria cinerea ATCC 14685]
Length = 436
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 20/300 (6%)
Query: 139 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 198
+LSS L+N F +R LF+ LIV RIG IP+PG D + + Y S +G +
Sbjct: 5 QLSSALSN-----FGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGIL 58
Query: 199 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L F G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y
Sbjct: 59 GMLNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKLITKYTR 118
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+ ++ AIL+++ VA + + S HV T LV G M + W+ + I+E G G
Sbjct: 119 YGTVLLAILQSLGVASFVFQQGVVVTSSFEFHVS-TIVSLVTGTMFLMWLGEQITERGIG 177
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-R 375
G SLII GI +G + ++++ L + M + ++ ++ VV E R
Sbjct: 178 NGISLIITAGIASGIPSGITRIIT--LTNQGAMSMLMALFIAFGALLLIYLVVYFESAQR 235
Query: 376 KVKLQYYGFKLASAARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K+ + Y A R+ +S + ++PF +N +G+ P + + ++ FPS L LGS
Sbjct: 236 KIPIHY-------AKRQFNSGLGGQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWLGS 288
>gi|34499621|ref|NP_903836.1| preprotein translocase subunit SecY [Chromobacterium violaceum ATCC
12472]
gi|34105471|gb|AAQ61826.1| preprotein translocase secY subunit [Chromobacterium violaceum ATCC
12472]
Length = 439
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 142/284 (50%), Gaps = 15/284 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++RR++ +++ RIG IP+PG + + + + + +G +D F GA + +
Sbjct: 14 GDLKRRIWFLIGALIVYRIGAHIPVPGINPAELAKLFHTSQTGLLDMFNMFSGGALSRFT 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VI 269
F LGI P I ASI++Q+ ++PSL QL+KEG G KI Y + ++ A ++ +
Sbjct: 74 VFALGIMPYISASIILQLAAEVLPSLKQLKKEGDAGRRKITQYTRYATVALATFQSFGIA 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V Y P + A + + T LV G M + W+ + I+E G G G SLIIC GI
Sbjct: 134 VMLYKQPNLVMTAQW--EFYLTTVVSLVTGTMFLMWLGEQITERGIGNGISLIICAGIAA 191
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
G + K L+ S+ +L +GV +VT V G RKV + Y ++ +
Sbjct: 192 GVPAAIGKTLTLTSQGSLPILFAILLFVGVI-LVTFLVVYAERGQRKVLVNYAKRQVGNR 250
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ ++P +N +G+ P + + ++ FP A++LG
Sbjct: 251 VMQGQ-----STHLPLKLNMAGVIPPIFASSIILFP---ATVLG 286
>gi|152964677|ref|YP_001360461.1| preprotein translocase subunit SecY [Kineococcus radiotolerans
SRS30216]
gi|151359194|gb|ABS02197.1| preprotein translocase, SecY subunit [Kineococcus radiotolerans
SRS30216]
Length = 438
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 26/302 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
VL +F ++RR+L T +IV+ R+G F+P PG + Q + D LG
Sbjct: 6 VLTAIGRAFRTPDLRRKLLFTLGIIVLVRLGSFVPAPGVSYPAV-QQCIDLAQTGNDLLG 64
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y +
Sbjct: 65 LVNLFSGGALLQLSIFALGIMPYITASIIVQLLTVVIPRFEALKKEGQQGTTKLTQYTRY 124
Query: 258 ISLGFAILEAVI-VACYSLPYSIYAAS--------HSVKHVMVTAFLLVCGAMTMSWICD 308
+++G A+L++ V P ++ + S++ +++ + G + W+ +
Sbjct: 125 LTIGLAVLQSTTYVTIARDPSRLFGTACNAPVLPDQSIQTIVLMVLTMTAGTGLIMWMGE 184
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++E G G G SL+I I G+ +L+ +G W F G+L V V V
Sbjct: 185 LVTERGIGNGMSLLIFAQIAAGFPTSLWA-----IGQENGWLTFA-GILLVGLFVVAAVV 238
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R+V +QY + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 AVEQSQRRVPVQYAKRMIGRRMYGGT-----STYIPLKVNMAGVIPVIFASSLLYLPALV 293
Query: 429 AS 430
A
Sbjct: 294 AQ 295
>gi|410622869|ref|ZP_11333690.1| preprotein translocase subunit SecY [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410157544|dbj|GAC29064.1| preprotein translocase subunit SecY [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 436
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL I++ R+G ++P+PG D ++ Q + G++ E+ + GA +
Sbjct: 15 SELKARLLFVLGAIIVFRLGSYVPIPGIDGNVLAQLFEQ-QKGTIVEMMNMFSGGALERA 73
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L H+ P L++L+KEG G KI Y +++L AI ++V +
Sbjct: 74 SVLALGIMPYITASIIVQLLSHMYPPLMELKKEGEAGKRKISQYTRYLTLMLAIFQSVGI 133
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 134 AT-GLPNLVQGLVVNPGIGFYFTAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 192
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + Q + F+L + + +T V V R++ + Y A
Sbjct: 193 AGLPTAIGQTAEQARLGEINLL-FLLVIGAIIVALTYLVVFVERAQRRIVVNY-----AK 246
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ ++P +N +G+ P + + ++ FP LA ++G F V L
Sbjct: 247 RQQGRKVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTLAGMVGQNETFSFLTDVSLAL 306
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F F
Sbjct: 307 SP-----GQP-LYVMLYAATIIFFCFF 327
>gi|11465763|ref|NP_053907.1| preprotein translocase subunit SecY [Porphyra purpurea]
gi|1711367|sp|P51297.1|SECY_PORPU RecName: Full=Protein translocase subunit SecY
gi|1276763|gb|AAC08183.1| Preprotein translocase subunit (chloroplast) [Porphyra purpurea]
Length = 411
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 170/332 (51%), Gaps = 42/332 (12%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T +L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L I+P L +L+K EG G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + P Y + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKP---YVFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A P+ L + + F
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V + P S +Y +Y+ + F+ F
Sbjct: 281 VLYLFCPNGS------LYLVLYSVLILFFSYF 306
>gi|27262236|gb|AAN87399.1| protein translocase subunit SecY [Heliobacillus mobilis]
Length = 422
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 47/350 (13%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYL 191
+S+++ ++ S++R ++ T V+ +I RIG IP+PG +R I Q +
Sbjct: 1 MSTLVGTLQNAWKISDLRTKIAYTLVMFLIFRIGAHIPVPGINRAAIEQLMNTGSLFGFF 60
Query: 192 SFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKI 251
+SG G+ K S F + I+P I ASI+MQ+L ++P L QL KEG DG KI
Sbjct: 61 DVISG--------GSFRKFSVFAMSITPYINASIIMQLLTVVIPRLEQLAKEGEDGRRKI 112
Query: 252 KSYIWWISLGFAILEAVIVACYSLPYSIYAA--SHSVKHVMVTAFLLVCGAMTMSWICDT 309
Y + ++ A ++A+ L Y + A + S+ ++ A L G + WI +
Sbjct: 113 TEYTRYFTIVLAFIQAI-----GLSYGLTGAVSNPSIWSYLLIALTLTAGTAFLMWIGER 167
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E+G G G SLII GI++ + M+ + + L +L + +
Sbjct: 168 ITENGIGNGISLIIFAGIVSRLPSGIMTMVEYVRVGTTNILNAALFVL-IAAATIAGIIY 226
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
+ EG R++ + Y ++ +IP +N +G+ PV+ + +LAFP+ +A
Sbjct: 227 INEGQRRIPVNYAKRQVGRRVYGGQ-----NTHIPMRVNMAGVIPVIFASSILAFPTTIA 281
Query: 430 SIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+ GSP Q W + + +AF FL ++F V IL+
Sbjct: 282 AFFPGSPIGQ----------------W-FQSYFAFGSFLHSVFYAVLILF 314
>gi|62184755|ref|YP_219540.1| preprotein translocase subunit SecY [Chlamydophila abortus S26/3]
gi|62147822|emb|CAH63568.1| putative preprotein translocase SecY subunit [Chlamydophila abortus
S26/3]
Length = 457
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A + S+P + S K + T ++ G + + WI +
Sbjct: 126 ACIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDRGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + V +L+P + WVY + Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYF 342
>gi|418287365|ref|ZP_12899974.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM233]
gi|372203843|gb|EHP17444.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM233]
Length = 436
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ + + GV ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGVLLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|282857343|ref|ZP_06266580.1| preprotein translocase, SecY subunit [Pyramidobacter piscolens
W5455]
gi|282584843|gb|EFB90174.1| preprotein translocase, SecY subunit [Pyramidobacter piscolens
W5455]
Length = 428
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 18/318 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDELGDFGAELKLSFF 213
+++RR+ T ++ + R+G IP PG + + Q + S V G +D GA + S F
Sbjct: 13 DLKRRILFTLGMLFVFRLGAHIPTPGINSAAMSQLFEGSGVLGFLDLFAG-GALRRFSLF 71
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
LG++P I ASI++Q+ I P+L +L+KEG G +K+ Y + ++ FA ++A+ +A +
Sbjct: 72 SLGVAPYINASIVLQLAAVIFPALERLQKEGPQGQKKMTQYTRYGAIFFAFVQAIGMAMW 131
Query: 274 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
+ AAS V V G++ + W+ + +++ G G G SL+I GI+ E
Sbjct: 132 LRRAGVLAASG--LDFFVAVITAVTGSVAVMWLGEEMTDHGIGNGISLLIFAGIVARLPE 189
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
+ + S + + +L L V V AV++ +G R++ +QY A +
Sbjct: 190 AVIQTFSMISSGEMNVVTLILA-LAVMVAVLAGAVLLEQGQRRLPVQY-----AKRVVGN 243
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 453
+IP +N G+ P++ + LL FPS + + H E L + G+
Sbjct: 244 RVYGGQSSFIPLRVNMGGVMPIIFASSLLIFPSTVLRLF------HGTERLANYFAPGS- 296
Query: 454 PWVYYTIYAFFVFLFNIF 471
W+Y +Y + F F
Sbjct: 297 -WLYTVLYVVLIVFFGFF 313
>gi|451980703|ref|ZP_21929089.1| Preprotein translocase, membrane subunit SecY [Nitrospina gracilis
3/211]
gi|451762039|emb|CCQ90328.1| Preprotein translocase, membrane subunit SecY [Nitrospina gracilis
3/211]
Length = 438
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 37/344 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+ AESF E++RR+F T ++++ RIG IP PG D + + + G++
Sbjct: 2 SGAESFANIFRIPELKRRVFFTLGVLIVYRIGAHIPTPGIDGAALAEIFEQ-AKGTILGF 60
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
D GA +L+ F LGI P I ASI++Q+L + P L QL+KEG G +KI Y +
Sbjct: 61 FDMFSGGALSRLTIFALGIMPYISASIILQLLTIVSPHLAQLKKEGEQGQKKITQYTRYG 120
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISES 313
++ +++++ +A + V + M+T L G + + W+ + ISE
Sbjct: 121 TVLLSVIQSSGMAVGLEAMKSPGGAPIVPDPGWEFRMMTMLTLTAGTVFIMWLGEQISER 180
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG-LLGVFTIVTMWAVVVTE 372
G G G SLII GI+ G + M L+G+ ++G LL V + + +V TE
Sbjct: 181 GIGNGISLIIFTGIVAGLPSAI-GMSLDLMGTG--ELSVLIGLLLAVVMMAVVGFIVFTE 237
Query: 373 GC-RKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
G R++ +QY G K+ ++P +N SG+ P + + ++ FP+
Sbjct: 238 GGQRRIPIQYAKRVVGRKMYGGQTS---------HLPLKVNTSGVIPPIFASSIIMFPAT 288
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+A + P+ Q V L P +Y I+ +F F F
Sbjct: 289 IAQFIDHPWMQTVSAALAPGN------LIYSLIFIGAIFFFCYF 326
>gi|126736626|ref|ZP_01752366.1| preprotein translocase SecY [Roseobacter sp. CCS2]
gi|126713939|gb|EBA10810.1| preprotein translocase SecY [Roseobacter sp. CCS2]
Length = 452
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 12/298 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R+R+ T L++I R+G FIP+PG D + Q +G L F GA +++
Sbjct: 21 TELRQRIMFTLGLLIIYRLGTFIPVPGIDGLALSQFMEDAQAGIGGILSMFTGGALSRMA 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+L + L L+KEG G K+ Y + ++ A +A +A
Sbjct: 81 IFTLGIMPYISASIVMQLLGSMWEPLKNLKKEGEQGRRKLNQYTRYGTVFLATAQAYGLA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL AA+ T +V G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 V-SLEAGGLAANPGAFFQASTVITIVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEI 199
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ + LSQ ++ P ++G++ + +V + V + RK+ +QY +
Sbjct: 200 PAAMAQFLSQGRSGAIS-TPVVVGIIIMLIVVLTFVVFMERSLRKIHIQYPRQQRGMKVY 258
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVKEILNP 446
+ S ++P +NP+G+ P + + LL P+ +++ G P + + P
Sbjct: 259 DGS-----TSHLPIKVNPAGVIPAIFASALLLLPTTISTFNGGSSGPLMSTILALFGP 311
>gi|227487086|ref|ZP_03917402.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541750|ref|ZP_03971799.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227093160|gb|EEI28472.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182456|gb|EEI63428.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 440
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 167/344 (48%), Gaps = 38/344 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGD 203
++F ++R++L T V+I++ R+G IP PG D I G D L
Sbjct: 6 QAFKDPDLRKKLLFTLVMIILYRVGAQIPSPGVDYVSIAGKLNELTEGQSDVYSMINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA LKLS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ A
Sbjct: 66 GGALLKLSVFAIGIMPYITASIIVQLLTVVIPKFEELKKEGQSGQTKMTQYTRYLTVALA 125
Query: 264 ILEAV-IVACYSL------PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ IVA + + H++ +++ + GA+ + W+ + I+E G G
Sbjct: 126 LLQSSGIVALAARGQLLGPQVRVLREGHNIWDLIILVVCMTGGAVLVMWMGELITEKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 375
G SL+I GI T L + + + SS P + + V I+ + VV + +G R
Sbjct: 186 NGMSLLIFAGIAT----RLPRDGANIFQSS---GPVVFSTVMVAVIILVVGVVFIEQGQR 238
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--G 433
++ +QY K R+ + Y+P +N G+ PV+ + L+ P ++ I+ G
Sbjct: 239 RIPVQYA--KRMIGRRQYGGTST---YLPLKVNQGGVIPVIFASSLIYVPVLITQIVNSG 293
Query: 434 SP-----FW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
SP +W ++V L+ +S W Y +Y + F+ F
Sbjct: 294 SPTPPDNWWMRNVIAYLHAPSS-----WQYIVLYFVLIIFFSYF 332
>gi|254494701|ref|ZP_05107872.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 1291]
gi|268602348|ref|ZP_06136515.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID18]
gi|226513741|gb|EEH63086.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 1291]
gi|268586479|gb|EEZ51155.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID18]
Length = 436
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|270307861|ref|YP_003329919.1| preprotein translocase subunit SecY [Dehalococcoides sp. VS]
gi|270153753|gb|ACZ61591.1| preprotein translocase subunit SecY [Dehalococcoides sp. VS]
Length = 438
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 162/346 (46%), Gaps = 38/346 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L ++F ++RRRL +T ++V +R +PLPG D + QD +G++ L
Sbjct: 10 LLQAMIDAFSLPDLRRRLLITLGILVAARFIAHVPLPGVDSAAL-QDLFD-QNGALGMLD 67
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F GA S LG+ P I ASI+M +L ++P L L KEG G KI + W+++
Sbjct: 68 LFSGGAMRYFSVAALGVYPYITASIIMTLLTPVIPKLTALSKEGEAGRNKINTITHWLAV 127
Query: 261 GFAILEAVIVACYS--LPYSIYAASHSVKHVMVTAFLL--VCGAMTMSWICDTISESGFG 316
A L A YS L A + + A +L V G M M W+ + I+ G G
Sbjct: 128 PTAAL-----AGYSQLLLLQREGAVAQTEPLAAVAIVLSIVAGTMFMVWLGEQITSYGIG 182
Query: 317 QGSSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G SLII GI+ G + + + L Q G +V + FM + T+ V+ TE
Sbjct: 183 NGISLIIFAGIVAGLPDMIGRGLMASDQFAGLAV--YAFMA------LLTTVLIVIFTEA 234
Query: 374 CRKVKLQYYGFKLASAA--REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS- 430
R++ +QY + S R E +IP +N +GM P++ + L+ P ++AS
Sbjct: 235 HRRIPVQYAQTVIRSGKMYRRGG-----ESHIPLRVNSAGMIPLIFASALVMLPGLVASY 289
Query: 431 -ILGSP----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ GS FW + I N S+ VY+ +Y F +F F
Sbjct: 290 FMAGSTEDPNFWNTIYNIFNSGASMPGG-LVYWGLYFFMTIIFAFF 334
>gi|194099937|ref|YP_002003075.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
NCCP11945]
gi|268593796|ref|ZP_06127963.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 35/02]
gi|268600010|ref|ZP_06134177.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae MS11]
gi|268604611|ref|ZP_06138778.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID1]
gi|268687499|ref|ZP_06154361.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-93-1035]
gi|291042797|ref|ZP_06568538.1| preprotein translocase SECY subunit [Neisseria gonorrhoeae DGI2]
gi|385336846|ref|YP_005890793.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935227|gb|ACF31051.1| preprotein translocase SECY subunit [Neisseria gonorrhoeae
NCCP11945]
gi|268547185|gb|EEZ42603.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 35/02]
gi|268584141|gb|EEZ48817.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae MS11]
gi|268588742|gb|EEZ53418.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID1]
gi|268627783|gb|EEZ60183.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-93-1035]
gi|291013231|gb|EFE05197.1| preprotein translocase SECY subunit [Neisseria gonorrhoeae DGI2]
gi|317165389|gb|ADV08930.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 436
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|289523349|ref|ZP_06440203.1| preprotein translocase, SecY subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503041|gb|EFD24205.1| preprotein translocase, SecY subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 430
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 157/318 (49%), Gaps = 23/318 (7%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQ 214
R LFV VL+V R+G IP PG D + + F G V L D GA + S F
Sbjct: 17 RILFVLGVLLVF-RLGAHIPTPGVDAKAMAS---LFEQGGVLSLFDLFAGGALRRFSIFA 72
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG++P I ASI+MQ+L +VP++ +++KEG +G KI Y ++ FA ++AV + +
Sbjct: 73 LGVTPYINASIVMQLLAVVVPAIEKMQKEGEEGRRKIVQYTRVSTILFAGIQAVGMVLWL 132
Query: 275 LPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
IY S+ +VT L+ G++ + W+ + IS+ G G G SL+I GI+ E
Sbjct: 133 RSMDIIYVGGISIVVAIVT---LIAGSIAVMWMGEMISDHGIGNGISLLIFAGIVARIPE 189
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
+ + + L + + ++ + + +V +++ EG R++ +QY + +
Sbjct: 190 AIMRTFTLLRTGEMNFLTLII-AIAIMIVVIAGCILLQEGQRRLPVQYAKRVVGTRVYGG 248
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 453
+IP +N +G+ P++ + +L FP+ +A + F Q + I +P +
Sbjct: 249 Q-----STFIPLRVNSAGVIPIIFASSVLLFPTTVARFFSAGFAQTIAGIFSPSSP---- 299
Query: 454 PWVYYTIYAFFVFLFNIF 471
+Y +Y + F F
Sbjct: 300 --IYMILYVLLIIFFTYF 315
>gi|451817079|ref|YP_007453280.1| protein translocase subunit SecY [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783058|gb|AGF54026.1| protein translocase subunit SecY [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 428
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 164/337 (48%), Gaps = 21/337 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F E+R+++ T +L+ + R+G IPLPG I DYL +S S LG
Sbjct: 1 MLQTLRNAFKVPELRKKILWTILLVAVFRMGSHIPLPG-----INSDYLKNLSQSGGLLG 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIVQLLTVAIPQLEQLSKEGDTGRKKIQNATRY 115
Query: 258 ISLGFA-ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+S G + +L I A S + + K ++V F LV G W+ D ++ G G
Sbjct: 116 VSFGISFVLAYGIFATISSSGATGGLNFIQKGIIV--FALVVGTTFCMWLGDQLTVKGIG 173
Query: 317 QGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G+S++I V I++ T+ M++ + GS+ + + V + T+ ++E R
Sbjct: 174 NGTSILIFVNIISRVPMTIASMMTLKEAGSASIVEIVLFAVFVVLLLATILYFSLSE--R 231
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+V +QY G AA S + +IP +I S + ++ + ++ FP +A + G
Sbjct: 232 RVPVQYAG---KFAAGNSSMVKSQSTHIPLSIIGSAVLAIIFSMSVMDFPKTIAQLFGGD 288
Query: 436 FWQHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIF 471
+ K IL NP + W+Y +YA FN F
Sbjct: 289 -KEWAKWILTNPTCVFNQKSWMYLVLYAILTIFFNWF 324
>gi|325287068|ref|YP_004262858.1| preprotein translocase subunit SecY [Cellulophaga lytica DSM 7489]
gi|324322522|gb|ADY29987.1| preprotein translocase, SecY subunit [Cellulophaga lytica DSM 7489]
Length = 447
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 162/335 (48%), Gaps = 34/335 (10%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-------- 205
E+R R+ +T L+++ R G I LPG D Q+ + SG+ E G FG
Sbjct: 15 EELRNRIIITLTLLLVYRFGAQIALPGIDS----QELGNLQSGT--EQGIFGLLNAFTGG 68
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A K S F LGI P I ASI++Q++ +P L +L+KEG G + I W+++ I+
Sbjct: 69 AFAKASVFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIAICIV 128
Query: 266 EA----VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+A + + + +P S + + ++ +LV G + W+ + I++ G G G SL
Sbjct: 129 QAPAYLLGLGAFGVPDSAFVLGKGLDFMIPAVIILVTGTVFAMWLGEKITDKGIGNGISL 188
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I +GI+ + + ++ G + +L + ++ +V + +V++ R++ +Q
Sbjct: 189 LIMIGIIATMPQAFMQEVASRTGENTGGPMLILVEVILWFLVILASVLIVLATRQIPVQ- 247
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-----SILGSPF 436
Y + AS E + IT YIP +N SG+ P++ L+ P ++ S +GS
Sbjct: 248 YARRTASGGYEKN-ITGSRQYIPLKLNASGVMPIIFAQALMFLPGMIGKYFNTSAIGS-- 304
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W V N + G Y ++AF + +F F
Sbjct: 305 WFEV----NFQDPFG---LAYNLLFAFLIIIFTYF 332
>gi|42524357|ref|NP_969737.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
HD100]
gi|39576566|emb|CAE80730.1| preprotein translocase SecY subunit [Bdellovibrio bacteriovorus
HD100]
Length = 442
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 25/321 (7%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
+A ES K S++R+R+ T L+ I RIG +P PG D + + + G F
Sbjct: 2 SAIESIAKNSDLRKRILFTLALLAIYRIGVHVPTPGVDGSAVLSFFQAQSQGIFGLFNTF 61
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA + S F LGI P I +SI+ Q+L +P L L+KEG G KI Y + ++
Sbjct: 62 TGGALSQFSIFALGIMPYISSSIIFQLLTSAIPYLEALKKEGEQGRRKINQYTRYATVAL 121
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---------LVCGAMTMSWICDTISES 313
AI++ ++ + L S H + AFL L G + W+ + I+E
Sbjct: 122 AIIQGYGISTW-LMNSTSPDGHPLVIAPTVAFLPFQIMTIITLTAGTCFIMWLGEQITER 180
Query: 314 GFGQGSSLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
G G G+SLII GI + G + L++++ +R+ ++ LL F + + AV+
Sbjct: 181 GIGNGTSLIIFTGIAAAIPGGAQQLWELVRT---GEMRFA--LVLLLVAFMVAIIAAVIY 235
Query: 371 TE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
E R++ +QY + + T ++P +N SG+ P + + LL FP+ +A
Sbjct: 236 MEVAQRRITVQYSQRQGGGGMQSMQTPTS---HLPIKLNISGVIPPIFASSLLMFPATMA 292
Query: 430 SILGSPFWQHVKEILNPETSV 450
+ +P+ + +++ LNP ++
Sbjct: 293 QFVNTPWLKALQDSLNPSGAI 313
>gi|414159394|ref|ZP_11415680.1| preprotein translocase subunit secY [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410884396|gb|EKS32222.1| preprotein translocase subunit secY [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 430
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
+FFK+ E+R ++F T ++VI +IG +IP PG + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFESQQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAILLAFI 124
Query: 266 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIVDPSPMSYLLIAIVLTAGTAFLLWLGEQITQYGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTIAWLQVAGLVIGLILLTMGAVYVLQAVRKIPIQ 244
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 439
Y K SA R T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSAQRLGRNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 440 VKEILNPETSVG 451
+ NP +++G
Sbjct: 299 IANTANPSSNIG 310
>gi|167629487|ref|YP_001679986.1| preprotein translocase subunit SecY [Heliobacterium modesticaldum
Ice1]
gi|167592227|gb|ABZ83975.1| preprotein translocase, secy subunit [Heliobacterium modesticaldum
Ice1]
Length = 422
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 168/336 (50%), Gaps = 22/336 (6%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
+S+++ ++ ++R ++ T ++ ++ RIG IP+PG +R +I Q S
Sbjct: 1 MSTLVGTLQNAWKLPDLRSKIIFTLMMFLVFRIGAHIPVPGINREVIEQLLNSGALFGFF 60
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
++ G+ S F + I+P I ASI+MQ+L ++PSL QL KEG +G +KI Y + +
Sbjct: 61 DVISGGSFRNFSVFAMSITPYINASIIMQLLTVVIPSLEQLAKEGEEGRKKITEYTRYFT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ A ++A+ ++ Y L ++ A+ S ++ A L G + + WI + I+E G G G
Sbjct: 121 ILLAFIQAIGLS-YGLKGAV--ANPSFAQYLLVATTLTAGTVFLMWIGERITEKGIGNGI 177
Query: 320 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
SLII GI L TLY+ + +G++ + ++ TI + + ++EG R+
Sbjct: 178 SLIIFAGIVSRLPAGIATLYEYVR--VGTTNVLNVLLFLIIAGATIAGI--IYISEGQRR 233
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSP 435
+ + Y A +IP +N +G+ PV+ + +LA P+ +A+ GSP
Sbjct: 234 IPVNY-----AKRVVGRRVYGGQSTHIPLKVNQAGVIPVIFASSILALPTTIAAFFPGSP 288
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q ++ N + +++ YA + F F
Sbjct: 289 VGQWFQQYFNFGS------FLHSAFYALLILFFTYF 318
>gi|2500728|sp|Q59912.1|SECY_STRGB RecName: Full=Protein translocase subunit SecY
gi|1213241|emb|CAA65158.1| membrane translocase [Streptomyces galbus]
Length = 437
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 29/344 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNV-QQCVREASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILE--AVIVACYSLPY----SIYAASHSVKHVMVTAFLLVC---GAMTMSWICD 308
+++ AIL+ ++ S P S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q G+ W ++ V I+ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLIMVALVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 429 ASIL-GSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLF 468
A G+ W K + + G P Y+ + FF F +
Sbjct: 293 AQFAGGNSGW---KSWVEQNLTKGDHPIYIVTYFLLIVFFAFFY 333
>gi|383787020|ref|YP_005471589.1| protein translocase subunit secY/sec61 alpha [Fervidobacterium
pennivorans DSM 9078]
gi|383109867|gb|AFG35470.1| protein translocase subunit secY/sec61 alpha [Fervidobacterium
pennivorans DSM 9078]
Length = 428
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 161/324 (49%), Gaps = 26/324 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
E+R R+ T +++++ R+G ++P+PG + + + +G + F GA
Sbjct: 13 EVRDRVIFTFLMLLVFRLGIYVPVPGINIKAWGEALSKQGTGLAGGVLSFYDVFTGGAFS 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F + ++P I ASI+MQ+L I+PSL +L KEG +G +K + Y +++G A L++
Sbjct: 73 RFSVFSMSVTPYINASIIMQLLASIIPSLKELLKEGEEGRKKFQHYTKNLTIGLAALQSF 132
Query: 269 IVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+V+ + Y A + V+ LV G M + WI D I+E G G G S++I GI
Sbjct: 133 VVSFGLANSYQGIIAVNKWLFSFVSTVSLVAGTMFLLWIGDRITEKGIGNGVSILIFAGI 192
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ Y Y + L ++ W F++ + VF +V + + V + R++K++Y A
Sbjct: 193 VSRYPA--YFRTAVLGNLNIFGWIFLIA-VAVFMVVAI--IYVQQAERRIKIEY-----A 242
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
+ Y+P +N SG+ P++ +++ P +A I G+ + + + +P
Sbjct: 243 TRMVGRRIYGGTSTYLPIKVNHSGVIPIIFAWAIVSIPEAIAQITGAQWAIKLFSMQSP- 301
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
+ IYA +F F F
Sbjct: 302 --------LMIIIYALLIFFFTYF 317
>gi|289579123|ref|YP_003477750.1| preprotein translocase subunit SecY [Thermoanaerobacter italicus
Ab9]
gi|289528836|gb|ADD03188.1| preprotein translocase, SecY subunit [Thermoanaerobacter italicus
Ab9]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 20/295 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
+IRRR+ T V+++I R+G IP+PG D ++I + G G F GA
Sbjct: 12 DDIRRRILYTVVMLIIFRLGSHIPVPGIDSKVIAN-----ILGQGQLFGFFDIISGGAFS 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ F + I+P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 SFTIFAMSITPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ I ++ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLRRAVINPTFFNLTVIVIT---LTAGTAFLMWLGERITENGIGNGSSLIIFAGII 183
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ +Y + + + + ++ ++ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIYMTAEYVRAGTANIFGAIAFVVAELLMIVL-IILATEGQRRIPVQY-----AK 237
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKE 442
+IP IN +G+ P++ LL FP LA+ S F+ V+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQR 292
>gi|348028115|ref|YP_004870801.1| preprotein translocase subunit SecY [Glaciecola nitratireducens
FR1064]
gi|347945458|gb|AEP28808.1| preprotein translocase subunit SecY [Glaciecola nitratireducens
FR1064]
Length = 436
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL I++ R+G ++P+PG D ++ Q + G++ E+ + GA +
Sbjct: 15 SELKSRLLFVLGAIIVFRLGSYVPIPGIDGNVLAQLFEQ-QKGTIVEMMNMFSGGALERA 73
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L H+ P L++L+KEG G KI Y +++L AI ++V +
Sbjct: 74 SVLALGIMPYITASIIVQLLSHMYPPLMELKKEGEAGKRKISQYTRYLTLLLAIFQSVGI 133
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 134 AT-GLPNLVQGLVVNPGIGFYFTAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 192
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + Q + F+L + + +T V V R++ + Y A
Sbjct: 193 AGLPTAIGQTAEQARLGEINLL-FLLVIGAIIVALTYLVVFVERAQRRIVVNY-----AK 246
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ ++P +N +G+ P + + ++ FP LA ++G F V L
Sbjct: 247 RQQGRKVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTLAGMVGQNETFSFLTDVSLAL 306
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F F
Sbjct: 307 SP-----GQP-LYVMLYAATIIFFCFF 327
>gi|315918285|ref|ZP_07914525.1| translocase SecY [Fusobacterium gonidiaformans ATCC 25563]
gi|313692160|gb|EFS28995.1| translocase SecY [Fusobacterium gonidiaformans ATCC 25563]
Length = 426
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 26/335 (7%)
Query: 145 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 202
N+ S K E+R R+ T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 203 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIAIALVQGFGV-CMWLQSVGLVFDPGILFFLTTIATLTAGTVFLMWVGEQISVKGIGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPSNIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 379 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+K L+ + VY +YA + F+ F
Sbjct: 294 --AIKTTLS--MMFNQQHPVYMIVYALVIVFFSFF 324
>gi|363423620|ref|ZP_09311683.1| preprotein translocase subunit SecY [Rhodococcus pyridinivorans
AK37]
gi|359731558|gb|EHK80600.1| preprotein translocase subunit SecY [Rhodococcus pyridinivorans
AK37]
Length = 437
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 40/338 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------GA 206
++RR++ + L+ + R+G +P PG D + Q + ++GS ++ G + GA
Sbjct: 13 DLRRKILIALGLVALYRLGATVPSPGVDYGNV-QACVDQLAGS-EQAGIYSLINLFSGGA 70
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A+L+
Sbjct: 71 LLQLSVFAIGIMPFITASIIVQLLTVVIPRFEELRKEGQSGQAKMTQYTRYLAVALAVLQ 130
Query: 267 AV-IVACYSLPYSIYAASH------SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A IVA + + S S+ ++V ++ GA + W + I+E G G G
Sbjct: 131 ATGIVALAARGQLLQGCSEPILADDSIFGMVVIVLVMTAGAAVVMWFGELITERGVGNGM 190
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVK 378
SL+I GI +L G + ++ V + + VV + +G R++
Sbjct: 191 SLLIFAGIAAALPSEGRMILESRGG-------LVFAIVCVVALALITGVVFIEQGQRRIP 243
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 434
+QY + S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 244 VQYAKRMVGRRMYGGS-----STYLPLKVNQAGIIPVIFASSLLYLPNLVAQLTGATTNP 298
Query: 435 --PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + + ++NP V +Y+ + FFVF +
Sbjct: 299 DPSWWQRIINEYLVNPNNPV--YIAIYFALIVFFVFFY 334
>gi|440533469|emb|CCP58979.1| preprotein translocase subunit SecY [Chlamydia trachomatis
Ia/SotonIa1]
gi|440534363|emb|CCP59873.1| preprotein translocase subunit SecY [Chlamydia trachomatis
Ia/SotonIa3]
Length = 457
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 175/345 (50%), Gaps = 37/345 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ + +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRFFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ + L S + + + +L+P + V Y+I+ + +F
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIF 338
>gi|126728204|ref|ZP_01744020.1| protein translocase subunit SecY [Sagittula stellata E-37]
gi|126711169|gb|EBA10219.1| protein translocase subunit SecY [Sagittula stellata E-37]
Length = 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 21/289 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+++R R+F T L+++ R+G FIP+PG D + +D++ S V + GA ++
Sbjct: 14 TDLRNRIFFTLGLLIVYRLGTFIPVPGIDGAAL-RDFVEQASTGVAGIVSMFTGGALGRM 72
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A ++A +
Sbjct: 73 GIFALGIMPYISASIMVQLLTAMVPTLEQLKKEGEQGRKKINQYTRYATVALATMQAYGL 132
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A SL LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 133 AV-SLEGGDLVTDPGWYFRAACVITLVGGTMFLMWLGEQITARGVGNGISLIIFVGIVAE 191
Query: 331 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFK 385
L + + G S P ++G++ + + V + RK+ +QY G K
Sbjct: 192 LPAALAQFFAS--GRSGAISPAVIVGVIIAVAALIAFVVFMERALRKITIQYPRRQVGMK 249
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ A ++P +NP+G+ P + + LL P +++ GS
Sbjct: 250 MTEAQSS---------HLPVKVNPAGVIPAIFASSLLLLPVTISTFSGS 289
>gi|317059785|ref|ZP_07924270.1| protein translocase subunit secY [Fusobacterium sp. 3_1_5R]
gi|313685461|gb|EFS22296.1| protein translocase subunit secY [Fusobacterium sp. 3_1_5R]
Length = 426
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 159/337 (47%), Gaps = 30/337 (8%)
Query: 145 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 202
N+ S K E+R R+ T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 203 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIAIALVQGFGV-CMWLQSVGLIFDPGILFFLTTIATLTAGTVFLMWVGEQISVKGIGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPSNIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 379 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 437 W--QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ I N + P VY +YA + F+ F
Sbjct: 294 AIKTTLSMIFNQQ-----HP-VYMIVYALVIVFFSFF 324
>gi|296313385|ref|ZP_06863326.1| preprotein translocase, SecY subunit [Neisseria polysaccharea ATCC
43768]
gi|296840095|gb|EFH24033.1| preprotein translocase, SecY subunit [Neisseria polysaccharea ATCC
43768]
Length = 436
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 15/282 (5%)
Query: 157 RRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQ 214
+R LF+ LIV RIG IP+PG D + + Y S +G + L F G+ + S F
Sbjct: 18 KRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERFSIFA 76
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
+GI P I ASI++Q I+PSL L+KEG G + I Y + ++ AIL+++ VA +
Sbjct: 77 IGIMPYISASIIVQFASEILPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSLGVASFV 136
Query: 275 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 334
+ S HV T LV G M + W+ + I+E G G G SLII GI +G
Sbjct: 137 FQQGVVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSG 195
Query: 335 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAARE- 392
+ K+++ S+ +L + G ++ + VV E RK+ + Y A R+
Sbjct: 196 IAKLVTLTNQGSMSILTALLVVFGALLLI--YLVVYFESAQRKIPIHY-------AKRQF 246
Query: 393 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 247 NGGVGSQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|255262422|ref|ZP_05341764.1| preprotein translocase, SecY subunit [Thalassiobium sp. R2A62]
gi|255104757|gb|EET47431.1| preprotein translocase, SecY subunit [Thalassiobium sp. R2A62]
Length = 454
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLS 211
+E+R+R+ T L+++ R+G +IP+PG D + Q D + G + + GA ++
Sbjct: 21 TELRQRILFTIGLLIVYRLGTYIPVPGIDGGALRQFMDDAAAGIGGILSMFTGGALSRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L + L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIIQLLSAMWEPLKQLKKEGEQGRKKINQYTRYGTVILATFQAYGLA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL A+ + + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 A-SLEAGDLASDPGLYFRVACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEI 199
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLASAA 390
L + LSQ G S P ++ + + IVT+ VV E RKV +QY ++
Sbjct: 200 PAALAQFLSQ--GRSGAISPAVIIGIILMVIVTLTFVVFMERSLRKVHIQYPRRQVGMKV 257
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P+ +++ G
Sbjct: 258 YDGG-----SSHLPIKVNPAGVIPAIFASALLLLPTTISTFSGG 296
>gi|428773989|ref|YP_007165777.1| protein translocase subunit SecY [Cyanobacterium stanieri PCC 7202]
gi|428688268|gb|AFZ48128.1| protein translocase subunit secY/sec61 alpha [Cyanobacterium
stanieri PCC 7202]
Length = 437
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 168/345 (48%), Gaps = 42/345 (12%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD-----YLSFVSG 196
A E+F + + +R RL +T L+++ R+G +IP+PG DR +L F+
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITVGLLIVVRLGIYIPVPGIDREAFEAAVQNLPFLGFL-- 67
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+L G + F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 68 ---DLFTGGGLATVGIFALGILPYINASIIIQLLTSAVPALEDLQKNEGEAGRRKIAQIT 124
Query: 256 WWISLGFAILEAVIVACYSL-PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+++LG+AI++A + L PY+I S S ++ T + G+M + W+ + I+E G
Sbjct: 125 RYVALGWAIIQATGITIGLLRPYAI---SDSPIFIVETVLAITAGSMFVMWLSEVITERG 181
Query: 315 FGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G+SL+I V I+ TL + +Q G +L L+ + IV + V V E
Sbjct: 182 LGNGASLLIFVNIVAVLPRTLGNTIDYAQTGGREAIAQVVLLILVFLVMIVGI--VFVQE 239
Query: 373 GCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + SA R+ E Y+P +N G+ P++ + +L PS +A
Sbjct: 240 GTRRI-------PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSVAG 292
Query: 431 IL-GSPFWQHVKEILNPETSVGARP---WVYYTIYAFFVFLFNIF 471
G+PF + + ++ RP W Y +Y+ + F+ F
Sbjct: 293 FADGTPFNTFINNV-----ALALRPGSIW-YVVVYSLLIVFFSYF 331
>gi|255067438|ref|ZP_05319293.1| preprotein translocase, SecY subunit [Neisseria sicca ATCC 29256]
gi|255048233|gb|EET43697.1| preprotein translocase, SecY subunit [Neisseria sicca ATCC 29256]
Length = 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 148/285 (51%), Gaps = 13/285 (4%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
++++RL F+ LIV RIG IP+PG D + + Y S +G + L F G+ +
Sbjct: 25 GDLKKRLTFLLGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERF 83
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL++ V
Sbjct: 84 SIFAIGIMPYISASIIVQLASEIIPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSFGV 143
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A + + ++S++ + T LV G M + W+ + I+E G G G SLII GI G
Sbjct: 144 ATFVFQQGV-VVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIAAG 202
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASA 389
+ ++L+ S+ + ++G ++ + VV E RKV + Y ++ S
Sbjct: 203 IPSGIARLLALTSQGSIGMPTAVSIVIGALLLI--YIVVYFESAQRKVPVHYAKRQIGSG 260
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ S ++PF +N +G+ P + + ++ FPS L S GS
Sbjct: 261 VMQGS-----NTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGS 300
>gi|312133894|ref|YP_004001233.1| secy [Bifidobacterium longum subsp. longum BBMN68]
gi|311773188|gb|ADQ02676.1| SecY [Bifidobacterium longum subsp. longum BBMN68]
Length = 445
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|440683424|ref|YP_007158219.1| protein translocase subunit secY/sec61 alpha [Anabaena cylindrica
PCC 7122]
gi|428680543|gb|AFZ59309.1| protein translocase subunit secY/sec61 alpha [Anabaena cylindrica
PCC 7122]
Length = 437
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 172/340 (50%), Gaps = 33/340 (9%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
A E+F + + +R RL VT ++++ R+G F+P+PG +R + +SG+ G
Sbjct: 10 AQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPIPGINR----VRFAEAISGNNSVFG 65
Query: 203 DF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 66 LLDIFSGRGLSTLGIFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++++G+AI+++V A +L +A + V TA L G+M + W + I+E G G
Sbjct: 126 YVTVGWAIIQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG
Sbjct: 184 NGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLLTIVGI--VFVQEGL 241
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 242 RRI-------PIISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFT 294
Query: 433 GSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + V L+P G+ PWVY +Y + F+ F
Sbjct: 295 KNPDLANIVNTYLSPS---GSAPWVYALVYLTSIVFFSYF 331
>gi|296454850|ref|YP_003661994.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum JDM301]
gi|296184282|gb|ADH01164.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum JDM301]
Length = 445
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 161/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +IV+ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIVVYRIGSFIPTPGVDYNVVNKCMATMGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + + +++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYRCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGKNGDWTKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|159042861|ref|YP_001531655.1| preprotein translocase subunit SecY [Dinoroseobacter shibae DFL 12]
gi|157910621|gb|ABV92054.1| preprotein translocase, SecY subunit [Dinoroseobacter shibae DFL
12]
Length = 453
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 25/291 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLS 211
+E+R+R+F T L+++ R+G +IP+PG D + + D + G V + GA ++
Sbjct: 21 TELRQRIFFTLGLLIVYRLGTYIPVPGIDGAQLREFMDQAAAGLGGVLNMFTGGAISRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L +VP L QL+KEG G +KI Y + ++ A +A
Sbjct: 81 IFALGIMPYISASIIVQLLTAMVPKLEQLKKEGEQGRKKINQYTRYGTVFLATFQA---- 136
Query: 272 CYSLPYSIYAASHSVK----HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
Y L S+ + LV G M + W+ + I++ G G G SLII VGI
Sbjct: 137 -YGLAISLESGGLVTDPGWFFRAACVITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGI 195
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YG 383
+ L + ++ P +LG++ + ++ V + RK+ +QY G
Sbjct: 196 IAELPAALAQFFESGRSGALS-TPVILGVILMLLATLVFVVFMERALRKIHIQYPRRQVG 254
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K+ ++P INP+G+ P + + LL P+ +++ G
Sbjct: 255 MKMYDGGSS---------HLPVKINPAGVIPAIFASSLLLLPTTISTFSGG 296
>gi|283768443|ref|ZP_06341355.1| preprotein translocase, SecY subunit [Bulleidia extructa W1219]
gi|283104835|gb|EFC06207.1| preprotein translocase, SecY subunit [Bulleidia extructa W1219]
Length = 428
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 167/337 (49%), Gaps = 23/337 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDEL 201
+L A F E R ++F T +++I R G IP+PG + + Q + + G ++ L
Sbjct: 1 MLGTFASLFKNKETRNKIFFTLAMLLIYRFGSAIPVPGVNTAQFAKQIAGNSLLGMMNLL 60
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G GA +LS F +G++P I ASI++Q+L ++PSL ++ K G G KI+ ++ +
Sbjct: 61 GG-GALERLSIFAMGVTPYITASIIIQLLSMDVIPSLTEMSKSGQTGRVKIEKTTRYLGV 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A +++ +V + + Y I ++ + + TA ++ G M + W+ D IS G G G
Sbjct: 120 VLAFVQSFSLVYGFDVQYKILQNAN-LSGYLYTATVMSAGTMFLIWVGDRISMKGIGNGL 178
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGL-LGVFTIVTMWAVVVTEGC 374
S+II GI++ + + ++ + L G S R F GL + +F + ++ +++
Sbjct: 179 SMIIFAGIVSNFPASFGQVYAILTGGSSRGEVFNGILQFGLYVLLFLAIVIFVIIMETAI 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY +S R + +T ++P IN + + PV+ ++ P I+ S +
Sbjct: 239 RKIPVQYTN---SSTTRGGADVT----FLPLKINSASVIPVIFAQSIMLAPQIIISFFNT 291
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + L+ + W +YA LF F
Sbjct: 292 SLYNKLSQWLSLTS------WTGLGLYAVLTILFTFF 322
>gi|386773298|ref|ZP_10095676.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
paraconglomeratum LC44]
Length = 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 158/343 (46%), Gaps = 29/343 (8%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-SVDELG 202
+N+ + E+R ++ T LI + R+G FIP PGFD + SG + LG
Sbjct: 1 MNSFVRALRTPELRAKILFTLGLIAVYRLGVFIPTPGFDATNVMMCADQAASGQGANVLG 60
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y +
Sbjct: 61 MVNMFSGGALLQLSIFSLGVMPYITASIIVQLLRVVIPRFEALHKEGASGTAKLTQYTRY 120
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++G +L+A + + + S+ +++ + G + + ++ + I
Sbjct: 121 LTIGLGVLQATTIITLVRSGNFFVGCTLELVPDQSIPTLLLMVMTMTVGTVLIMFMGEMI 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLL-GVFTIVTMWAVV 369
+E G G G SL+I I + + + + QL G W F L +L G+ +V M V
Sbjct: 181 TERGVGNGMSLMIFSSIAASFPAS-FGQVWQLKG----WITFSLVMLVGLLIMVGM--VF 233
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + R++ +QY A YIP +N +G+ PV+ + +LA P + A
Sbjct: 234 VEQSQRRIPVQY-----AKRMVGRRMYGGTSTYIPIKVNQAGVIPVIFASSILALPQMAA 288
Query: 430 SILGSPFWQHVKEILNPETSVGAR-PWVYYTIYAFFVFLFNIF 471
S G P V+ I N +GA W+Y +Y + F F
Sbjct: 289 S-FGDPSAGWVQWI-NTHLVLGASFSWIYAVVYVALIVFFAFF 329
>gi|108804954|ref|YP_644891.1| protein translocase subunit secY/sec61 alpha [Rubrobacter
xylanophilus DSM 9941]
gi|108766197|gb|ABG05079.1| protein translocase subunit secY/sec61 alpha [Rubrobacter
xylanophilus DSM 9941]
Length = 428
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 161/344 (46%), Gaps = 40/344 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-- 200
+L + A ++ E+R++LF TA ++ R G F+PLPG +R ++ +G +D+
Sbjct: 1 MLGSLANAWKIPELRQKLFFTAAMLAAYRAGAFVPLPGINREVL-------AAGGLDQNA 53
Query: 201 ----LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
G F GA LS F LGI P I A+I+MQ++ +P L +L +EG G +KI Y
Sbjct: 54 ITGLFGVFTGGAFNNLSVFALGIMPYITAAIVMQLMTVAIPRLQELAREGEVGQQKITQY 113
Query: 255 IWWISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+L + +++V + + S + A + + L G M W + I++
Sbjct: 114 TRVFTLALSFIQSVAMVLFLRSGQFGPVLAGAGALDLFLVVVTLTTGVMVTMWFGELITQ 173
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VT 371
G G G SLII IL+ + ++ GS + + +LG+ ++ + A+V V
Sbjct: 174 RGLGNGISLIITASILSQAPNAVRTLIED--GSVLT-----MVILGIIAVMIVAAIVFVN 226
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
EG R++ + Y ++ + Y+P +N +G+ P++ + LL FP ++
Sbjct: 227 EGQRRIPITYAKRQVGRRMSQGG-----TTYLPLKVNMAGVIPIIFASSLLIFPVVITQF 281
Query: 432 LG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S + + +I P ++ Y +YA + +F F
Sbjct: 282 AAGGDQSSWLFRLAQIFAPPSA------PYLILYALLIVMFTYF 319
>gi|309812354|ref|ZP_07706109.1| preprotein translocase, SecY subunit [Dermacoccus sp. Ellin185]
gi|308433659|gb|EFP57536.1| preprotein translocase, SecY subunit [Dermacoccus sp. Ellin185]
Length = 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 40/357 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L + +F E+R ++ T ++ + R+G IP PG L+ + + GS LG
Sbjct: 1 MLTSFGRAFRTPELRNKILFTLAIMALFRLGSHIPTPGISFDLVAKCQAA-AGGSNSLLG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y +
Sbjct: 60 LANLFSGGALLQLSIFALGIMPYITASIIIQLLTVVIPRFETLKKEGQSGQAKMTQYTRY 119
Query: 258 ISLGFAILEA--VIVACYSLPYSIYAAS----------HSVKHVMVTAFLLVCGAMTMSW 305
+++ A+L++ +I A S P++I S S+ V++ L G + W
Sbjct: 120 LAIALALLQSSTLITAARS-PWTILGGSPTTCSTIMTDDSIPTVLLMILTLTAGTGLIMW 178
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
+ + ++E G G G SL+I + ++L+ + +Q G R+ ++ L V T V
Sbjct: 179 LGEQVTERGIGNGMSLLILTAVAARVPQSLWAIHNQGWG---RFIAVVIMCLAVTTAV-- 233
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V V R++ +QY K R T YIP +N + + P++ T LL+ P
Sbjct: 234 --VFVENSQRRIPVQYA--KRMVGRRSYGGTTT---YIPLKVNMANVIPIIFATSLLSLP 286
Query: 426 SIL----ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
++ A+ P W + +N + G P VY IY + F F VSI Y
Sbjct: 287 VMVSQFAANKTNPPGW---AQWINTYLARGDHP-VYMAIYTVLILFFTFF-YVSITY 338
>gi|374314377|ref|YP_005060806.1| membrane-embebed preprotein translocase subunit [Serratia
symbiotica str. 'Cinara cedri']
gi|363988603|gb|AEW44794.1| membrane-embebed preprotein translocase subunit [Serratia
symbiotica str. 'Cinara cedri']
Length = 443
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 16/293 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RR+ + +++ R+G FIP+PG D ++ + L G++ E+ + GA +
Sbjct: 17 SELKRRILFVTIALIVFRVGSFIPIPGVDTTVLAK-LLEQQRGTIIEMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L+Q++KEG G +KI Y + +L AI +A+ +
Sbjct: 76 SVFALGIMPYISASIIIQLLTVVHPTLMQIKKEGEAGRQKISQYTRYGTLVLAIFQAIGI 135
Query: 271 ACYSLP----YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A LP + K LV G + + W+ + ISE G G G S+II G
Sbjct: 136 AT-GLPNMPGMQDLVINLGFKFYFTAVISLVTGTIFLMWLGEQISEHGIGNGISMIIFAG 194
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + + +L + VF VT V + G R++ + Y
Sbjct: 195 IVAGLPPAVAHTIEQARQGELHFLLLLLVTVLVFA-VTFLVVFIERGQRRIVVNY----- 248
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQ 438
A + ++P +N +G+ P + + ++ FP+ +AS GS W
Sbjct: 249 AKRQQGRRIYAAQSTHLPLKVNMAGVIPAIFASSVILFPATIASWFGGSTHWN 301
>gi|307154824|ref|YP_003890208.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7822]
gi|306985052|gb|ADN16933.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7822]
Length = 439
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 162/336 (48%), Gaps = 34/336 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---- 197
A E+F + + +R RL VT L+++ R G F+P+PG DR + F+ S
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTVGLLILVRFGIFVPVPGLDR----AKFADFIQNSPALG 65
Query: 198 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
+ ++ G L F LGI P I ASI+MQ+L +PSL L+K EG G KI
Sbjct: 66 ILDIFTGGGLSTLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQISR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+++LG+AI+++ + L + A + ++ T L G+M + WI + I+E G G
Sbjct: 126 YVALGWAIIQSFGITLGLLVQNGVIAGSPIP-ILETVLALTAGSMFVMWISELITERGIG 184
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G+SL+I V I+ +TL + + ++ LL VF I+ + V V EG R+
Sbjct: 185 NGASLLIFVNIVAVLPKTLGNTIDYAQTGGRQAVAQVVILLLVFLIMIIGIVFVQEGTRR 244
Query: 377 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-SILG 433
+ + SA R+ E Y+P +N G+ P++ + +L P LA S+ G
Sbjct: 245 I-------PIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPYQLARSVSG 297
Query: 434 -SPFWQHVKEILN---PETSVGARPWVYYTIYAFFV 465
F Q + I+N P + W+Y Y+ +
Sbjct: 298 EGTFSQILIRIVNYLQPGS------WIYVLFYSLLI 327
>gi|403510172|ref|YP_006641810.1| preprotein translocase, SecY subunit [Nocardiopsis alba ATCC
BAA-2165]
gi|402800397|gb|AFR07807.1| preprotein translocase, SecY subunit [Nocardiopsis alba ATCC
BAA-2165]
Length = 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 158/345 (45%), Gaps = 39/345 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R +L T ++ I R+G IP PG D I + + + D+ G
Sbjct: 1 MLGAFVRAFRTPDLRNKLLFTLFILTIFRLGSVIPAPGIDSAAIREQMETITAA--DQSG 58
Query: 203 DF--------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
+ GA L+L+ F LG+ P I ASI++ +L ++P L L+KEG G KI Y
Sbjct: 59 VYALVNLFSGGALLQLAVFALGVMPYITASIIINLLTVVIPRLESLKKEGQAGQSKITQY 118
Query: 255 IWWISLGFAILEAV-IVACY--------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSW 305
+++L A+L+A IVA ++P S Y + + ++ F + G + W
Sbjct: 119 TRYLTLMLAVLQATSIVAMARTGALFQNAIPVSSYMPNQDILTLVTIVFTMTAGTAIIMW 178
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLG--SSVRWWPFMLGLLGVFTIV 363
+ + I+E G G G SL+I +T+ + S ++G W F + + ++
Sbjct: 179 MGELITERGVGNGMSLLI-------FTQVIAVFPSAIMGLYEERSVWIFTIICMAGLALI 231
Query: 364 TMWAVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 422
T AVV E R++ +QY + S YIP +N +G+ PV+ + LL
Sbjct: 232 T--AVVFMEQAQRRIPVQYAKRMVGRRMYGGS-----STYIPLKVNQAGIIPVIFASSLL 284
Query: 423 AFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFL 467
P ++ +LG V + G P VY + AFFV +
Sbjct: 285 YLPQLIVGLLGQDSTHPVAQFFQTYFLTGTHP-VY--MAAFFVMI 326
>gi|313889577|ref|ZP_07823222.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
SPIN 20026]
gi|416853044|ref|ZP_11910189.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
LQ 940-04]
gi|313122086|gb|EFR45180.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
SPIN 20026]
gi|356740533|gb|EHI65765.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
LQ 940-04]
Length = 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 171/344 (49%), Gaps = 60/344 (17%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R+++ T +I+I RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRQKILYTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISLG A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLGLAFIQS 126
Query: 268 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A + SL ++ +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNSLSNVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTE---TLYK-MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 376
GI++ T+Y+ + ++ +G+L IV + A+V V + K
Sbjct: 187 GIISSIPNAIATVYEDYFVNVKAGDIQSSYLAVGIL----IVAVLAIVFFTTFVQQAEYK 242
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY KL A S Y+P +NP+G+ PV+ + + PS L PF
Sbjct: 243 IPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLI-----PF 288
Query: 437 WQH---------VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+Q+ +++ILN ++ G +YAF + LF+ F
Sbjct: 289 FQNGRDIPWLTKLQDILNYQSPTGM------IVYAFLIILFSFF 326
>gi|23466150|ref|NP_696753.1| preprotein translocase subunit SecY [Bifidobacterium longum
NCC2705]
gi|227546496|ref|ZP_03976545.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum ATCC 55813]
gi|239621030|ref|ZP_04664061.1| preprotein translocase SecY subunit [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322689909|ref|YP_004209643.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis 157F]
gi|384200782|ref|YP_005586529.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum KACC 91563]
gi|23326887|gb|AAN25389.1| preprotein translocase SecY subunit [Bifidobacterium longum
NCC2705]
gi|227213045|gb|EEI80924.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239516131|gb|EEQ55998.1| preprotein translocase SecY subunit [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320461245|dbj|BAJ71865.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis 157F]
gi|338753789|gb|AEI96778.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum KACC 91563]
Length = 445
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|241759615|ref|ZP_04757716.1| preprotein translocase, SecY subunit [Neisseria flavescens SK114]
gi|241319987|gb|EER56368.1| preprotein translocase, SecY subunit [Neisseria flavescens SK114]
Length = 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 142/284 (50%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 14 GDLKKRLAFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+ IVPSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 74 IFAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + S H+ T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 134 TFVYQQGVVVTSSLEFHI-STVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGI 192
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 390
+ ++L+ S+ + ++G+ ++ +AVV E RKV + Y + S
Sbjct: 193 PSGIVRLLTLTEQGSMSMLMAVSIVIGILLLI--YAVVYFESAQRKVPVHYAKRQFGSGM 250
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
I ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 251 MPGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 289
>gi|257069487|ref|YP_003155742.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
faecium DSM 4810]
gi|256560305|gb|ACU86152.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
faecium DSM 4810]
Length = 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 29/343 (8%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR--LIPQDYLSFVSGSVDEL 201
+N+ + E+R ++F T LI + R+G F+P PGFD ++ D + GS + L
Sbjct: 1 MNSFVRALRTPELRAKIFFTLGLIAVYRLGVFVPTPGFDATNVMMCADQAASAGGS-NVL 59
Query: 202 G-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
G GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y
Sbjct: 60 GMVNMFSGGALLQLSVFALGVMPYITASIIVQLLRVVIPRFEALHKEGASGTAKLTQYTR 119
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDT 309
++++G +L++ + + + S+ ++ + G + + ++ +
Sbjct: 120 YLTIGLGVLQSTTIVTLVRSGNFFVGCELELVPDQSIPTLLTMVLTMTVGTVLIMFMGEM 179
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G SL+I I + + + ++ S L G W F L +L V ++ + V
Sbjct: 180 ITERGIGNGMSLLIFTSIASSFPASFGQVWS-LQG----WLTFSLVVL-VALVIMVGMVF 233
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + R++ +QY A YIP +N +G+ PV+ + +LA P +L+
Sbjct: 234 VEQSQRRIPVQY-----AKRMVGRRMYGGTSTYIPVKVNQAGVIPVIFASSILALPQMLS 288
Query: 430 SILGSPFWQHVKEILNPETSVG-ARPWVYYTIYAFFVFLFNIF 471
S G P V+ + N +G + W+Y +Y + F F
Sbjct: 289 S-FGDPEAGWVQWV-NANLVLGFSFSWIYAVVYVTLIVFFAFF 329
>gi|223042529|ref|ZP_03612578.1| preprotein translocase, SecY subunit [Staphylococcus capitis SK14]
gi|314934277|ref|ZP_07841636.1| preprotein translocase, SecY subunit [Staphylococcus caprae C87]
gi|417906297|ref|ZP_12550088.1| preprotein translocase, SecY subunit [Staphylococcus capitis
VCU116]
gi|222444192|gb|EEE50288.1| preprotein translocase, SecY subunit [Staphylococcus capitis SK14]
gi|313652207|gb|EFS15970.1| preprotein translocase, SecY subunit [Staphylococcus caprae C87]
gi|341598167|gb|EGS40684.1| preprotein translocase, SecY subunit [Staphylococcus capitis
VCU116]
Length = 430
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y S+ ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLGGKLIMDKSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ ++ + L +S+ W + GL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSIEQFGQSLFVGQDDTSLAWLK-IAGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K S R + T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSTQRLGTQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G ++ I +A+F
Sbjct: 298 NIADTANPSSNIGMIVYIVLIIAFAYF 324
>gi|187934067|ref|YP_001884493.1| preprotein translocase subunit SecY [Clostridium botulinum B str.
Eklund 17B]
gi|187722220|gb|ACD23441.1| preprotein translocase, SecY subunit [Clostridium botulinum B str.
Eklund 17B]
Length = 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 165/345 (47%), Gaps = 39/345 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F SE+R++ F +L+ + RIG IP+PG I DYL +S S L
Sbjct: 1 MLQTLRNAFKVSELRKKFFWIILLVAVFRIGSHIPVPG-----INADYLKSISQSGGLLS 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S F LG+ P I ASI+MQ+L +P L QL KEG DG +KI++ +
Sbjct: 56 FYDLLSGGAFSRFSIFALGVMPYINASIIMQLLTVAIPQLEQLSKEGEDGRKKIQNATRY 115
Query: 258 ISLGFAILEAVIVACYSLPYSIYA------ASHSVK--HVMVTAFLLVCGAMTMSWICDT 309
+SLG + + L + IYA A+ +K ++V F LV G+ W+ D
Sbjct: 116 VSLGISFI---------LAFGIYATISNSGATAGIKTSEMLVIIFALVVGSTFCMWLGDQ 166
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
++ +G G G+S++I V I++ T+ + + +V + L F V + A+V
Sbjct: 167 LTVNGIGNGTSILIFVNIVSRIPMTMGSIAASKQAGNVS--IIEVALFAAF-FVALLAIV 223
Query: 370 V--TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
+ + R++ +QY G A + +IP +I S + ++ ++ FP
Sbjct: 224 LYFSLAERRIPVQYAG----KAVGGSKMMRNQTSHIPLSIIGSAVIAIIFAMSVMDFPRT 279
Query: 428 LASILGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF 471
+A+ + + W IL +T V + W+Y +YA F F
Sbjct: 280 IATFVPNKSWAM--WILTNKTCVFNSESWMYIVLYAILTLFFTWF 322
>gi|340758483|ref|ZP_08695069.1| preprotein translocase, SecY subunit [Fusobacterium varium ATCC
27725]
gi|251836736|gb|EES65270.1| preprotein translocase, SecY subunit [Fusobacterium varium ATCC
27725]
Length = 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 156/324 (48%), Gaps = 25/324 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G +IP PG D D L+ ++ D LG GA +
Sbjct: 19 ELRDRIIFTLIMFLVARVGTYIPAPGIDV-----DRLATMTAQSDILGYINMFSGGAFKR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+ +L I+P + +++K+G G KI + ++++ AI++
Sbjct: 74 VSIFALGIVPYINASIVFSLLAVIIPKIEEIQKDGEAGRNKINQWTRYLTIAIAIVQGFG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + WI + IS G G G SL+I + +++
Sbjct: 134 V-CMWLQSVGLVTTPGILFFLTTVVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY--GFKLA 387
G ++ + + + GS P ++ + G I V+ G RK+ + Y GF
Sbjct: 193 GGPSSVVQTIQTMKGSKF-LIPVLILIAGAAVITVAGIVIFQLGQRKIPIHYVGKGFSGK 251
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
++S YIP +N +G+ PV+ + ++ PS++ + + S + K L
Sbjct: 252 GGMGQNS-------YIPLKLNSAGVMPVIFASVVMMIPSVIINAIPSQY--TFKTTLAMV 302
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
S + VY IYA + F+ F
Sbjct: 303 FS--QKHPVYMIIYAIVIIFFSFF 324
>gi|189440589|ref|YP_001955670.1| preprotein translocase subunit SecY [Bifidobacterium longum DJO10A]
gi|317483430|ref|ZP_07942420.1| eubacterial secY protein [Bifidobacterium sp. 12_1_47BFAA]
gi|322691850|ref|YP_004221420.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum JCM 1217]
gi|189429024|gb|ACD99172.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A]
gi|316915116|gb|EFV36548.1| eubacterial secY protein [Bifidobacterium sp. 12_1_47BFAA]
gi|320456706|dbj|BAJ67328.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 445
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTDGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|126740818|ref|ZP_01756503.1| protein translocase subunit SecY [Roseobacter sp. SK209-2-6]
gi|126718114|gb|EBA14831.1| protein translocase subunit SecY [Roseobacter sp. SK209-2-6]
Length = 447
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 13/281 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 210
+++R R+ T L+++ R+G FIP+PG D + Q+++ G + + GA ++
Sbjct: 14 TDLRNRILFTLGLLIVYRLGTFIPVPGIDAAAL-QEFMEQAGQGIGGMVSMFTGGALGRM 72
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A ++ +
Sbjct: 73 GIFALGIMPYISASIIIQLLTSMVPALEQLKKEGEQGRKKINQYTRYGTVLLATAQSYGL 132
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A SL A + + LV G M + W+ + I++ G G G SLII VGI+
Sbjct: 133 AV-SLESGDLATDPGLYFRLACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGIIAE 191
Query: 331 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
++ + + G S P ++G++ + V M+ V + RK+ +QY ++
Sbjct: 192 VPASIAQFFAS--GRSGAISPAVIIGVIFMVIAVIMFVVFMERALRKIHIQYPRRQVGMK 249
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ ++P +NP+G+ P + + LL P+ +++
Sbjct: 250 VYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPTTIST 285
>gi|428224253|ref|YP_007108350.1| protein translocase subunit SecY [Geitlerinema sp. PCC 7407]
gi|427984154|gb|AFY65298.1| protein translocase subunit secY/sec61 alpha [Geitlerinema sp. PCC
7407]
Length = 441
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 24/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+A E+F + + +R RL +T L+++ R+G F+P+PG DR D + G V
Sbjct: 10 SAQETFLQMAQAAGLRSRLLLTIGLLILVRLGIFLPVPGIDRAAFSADLQNNNFGGVIGF 69
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWW 257
D G L F LGI P I ASI++Q+L +P+L L+K EG G KI +
Sbjct: 70 LDVFVGGGLSTLGIFALGILPYINASIILQLLTAALPALEDLQKNEGEAGRRKISQITRY 129
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
++LG+A+L++ ++ + L S YA + V + L G+M + W+ + I+E G G
Sbjct: 130 VALGWAVLQSFGLSAFLL--SRYAENPGPIFVAESVIALCAGSMFVMWVGELITEQGVGN 187
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G+SL+I + I++ +L + + ++ LL VF ++ + V V EG R++
Sbjct: 188 GASLLIFLNIVSSLPRSLGQTIELAQSGDRSTVGGIVILLLVFLVMIVGIVFVQEGTRRI 247
Query: 378 KLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS--ILG 433
+ SA R+ E Y+P +N G+ P++ + +L P LA+ G
Sbjct: 248 -------PIVSARRQVGRRLYPESRSYLPLRLNQGGVMPIIFASAVLILPVSLANNFFRG 300
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + L+P G PW+Y + Y + F+ F
Sbjct: 301 NETLNRIALSLSPG---GPMPWLYVSFYLVLILFFSYF 335
>gi|407788335|ref|ZP_11135467.1| preprotein translocase subunit SecY [Celeribacter baekdonensis B30]
gi|407197616|gb|EKE67670.1| preprotein translocase subunit SecY [Celeribacter baekdonensis B30]
Length = 452
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 147/296 (49%), Gaps = 35/296 (11%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLS 211
E+R+R+F T L+++ R+G +IP+PG D + D + G + + GA ++
Sbjct: 21 KELRQRIFFTLGLLIVYRLGTYIPVPGIDGGALKNFMDQAASGIGGILSMFTGGALGRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VPSL L+KEG G +KI Y + ++ A+ +A
Sbjct: 81 IFALGIMPYISASIIVQLMTSMVPSLENLKKEGEAGRKKINQYTRFGTVALALFQA---- 136
Query: 272 CYSLPYSIYAA--SHS-----VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
Y L S+ A +H V++T LV G M + W+ + I++ G G G SLII
Sbjct: 137 -YGLAASLEAGDLAHDPGWYFRAGVVIT---LVGGTMFLMWLGEQITQRGIGNGISLIIF 192
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQY- 381
VGI+ L + G + P ++ L+ + IV + A VV RKV +QY
Sbjct: 193 VGIVAEIPRALAQFFES--GRTGAVSPAVI-LIVIAMIVGVIAFVVFMERALRKVHIQYP 249
Query: 382 ---YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
G K+ A ++P +NP+G+ P + + LL P+ +A+ G
Sbjct: 250 RRQQGMKIYDAQSS---------HLPIKVNPAGVIPAIFASSLLLLPTTVATFSGQ 296
>gi|186684492|ref|YP_001867688.1| preprotein translocase subunit SecY [Nostoc punctiforme PCC 73102]
gi|186466944|gb|ACC82745.1| preprotein translocase, SecY subunit [Nostoc punctiforme PCC 73102]
Length = 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 168/341 (49%), Gaps = 33/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R RL VT ++++ R+G F+P+PG DR P+ + +SGS
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGVLILVRLGIFLPVPGIDR---PR-FAEAISGSNSIF 64
Query: 202 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++++ +AIL++ A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVCWAILQST--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 316 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G+SL+I V I+ + L L Q+ G +L L+ + TIV + VVV EG
Sbjct: 183 GNGASLLIFVNIVASLPKALGDTIDLVQVGGRETVGRVIVLILVFLATIVGI--VVVQEG 240
Query: 374 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
R++ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 241 MRRI-------PIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLIANF 293
Query: 432 L-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + L+P G+ WVY +Y + F+ F
Sbjct: 294 AKNAELANIINTYLSPS---GSGSWVYALVYMISIIFFSYF 331
>gi|192361952|ref|YP_001981228.1| preprotein translocase subunit SecY [Cellvibrio japonicus Ueda107]
gi|190688117|gb|ACE85795.1| preprotein translocase, SecY subunit [Cellvibrio japonicus Ueda107]
Length = 445
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 18/325 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
E+ RL + IVI RIG IP+PG D I + + G++ LG F GA
Sbjct: 16 GELWARLRFLFLAIVIYRIGTHIPVPGLDPERIA-NLFNQNQGTI--LGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
++S LGI P I ASI+MQ+L + PSL QL+KEG G KI Y + ++ A ++A+
Sbjct: 73 RMSILALGIMPYISASIIMQLLTAVTPSLEQLKKEGDAGRRKINQYTRYFTVVLASVQAL 132
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+A S Y + + LV GA+ M W+ + ++E G G G S++I GI+
Sbjct: 133 AMAV-SFSGFAYGGEPGFAYYFIAVVSLVTGAIFMMWLGEQVTERGIGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 387
G + + + + ++ + +V +W VV E G R++ + Y A
Sbjct: 192 AGMPSAIGQAFESARQGDLNILALL--IVAILALVIIWLVVRIERGQRRITVNY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP- 446
+ ++P IN SG+ P + + +L FP+ +A G + +L
Sbjct: 245 KRQQGRQAYAAQSSHLPLKINMSGVIPAIFASSILLFPASIAQWFGQGGDGVINNVLQEI 304
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
++G +Y ++A + F F
Sbjct: 305 ALAIGPGQPLYILLFAGLITFFCFF 329
>gi|338811108|ref|ZP_08623344.1| preprotein translocase subunit SecY [Acetonema longum DSM 6540]
gi|337276931|gb|EGO65332.1| preprotein translocase subunit SecY [Acetonema longum DSM 6540]
Length = 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 150/293 (51%), Gaps = 24/293 (8%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
A + FK +E+R+++ T + ++ R G IP+PG + +I Q F +G++ L D
Sbjct: 3 GALSNVFKITELRQKVVFTLAMFLVFRAGTHIPVPGVNAAVIEQ---LFTTGNLFGLMDL 59
Query: 205 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA K S F + I+P I ASI+MQ+L +VP Q KEG +G +KI + ++
Sbjct: 60 FSGGALSKFSVFAMSITPYINASIIMQLLTIVVPKFEQWAKEGEEGRKKITQLTRYGTVL 119
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
++A+ +A Y L +I + S+ ++++ A L G + + W+ + I+E G G G SL
Sbjct: 120 LGFIQAIGMA-YGLRVAII--NPSIGYILLIALTLTAGTVFLMWLGEQITEKGIGNGISL 176
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKV 377
II GI++ + LY + L ++ +G L +F I+ + +V + +G RK+
Sbjct: 177 IIFAGIVSRLPDGLYVLYQYLAAGTIH-----IGNLLLFIIIALAMIVFVIAIQQGQRKI 231
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+QY A +IP IN +G+ P++ + +L FP +A
Sbjct: 232 PVQY-----AKRVVGRKTYGGHSTHIPLKINQAGVIPIIFASSVLMFPVTIAQ 279
>gi|384197710|ref|YP_005583454.1| preprotein translocase subunit SecY [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333109804|gb|AEF26820.1| preprotein translocase, SecY subunit [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|339479822|gb|ABE96290.1| Protein translocase subunit secY [Bifidobacterium breve UCC2003]
Length = 445
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYKCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NNNLANTTSVW-YIALYALMIVFFCFF 332
>gi|297242950|ref|ZP_06926888.1| preprotein translocase subunit SecY [Gardnerella vaginalis AMD]
gi|298253057|ref|ZP_06976849.1| preprotein translocase subunit SecY [Gardnerella vaginalis 5-1]
gi|296889161|gb|EFH27895.1| preprotein translocase subunit SecY [Gardnerella vaginalis AMD]
gi|297532452|gb|EFH71338.1| preprotein translocase subunit SecY [Gardnerella vaginalis 5-1]
Length = 425
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 157/318 (49%), Gaps = 22/318 (6%)
Query: 166 LIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELKLSFFQLGISPQ 220
+I+I RIG FIP+PG D +++ + S S + +G G+ L+LS F LG+ P
Sbjct: 1 MIIIYRIGSFIPIPGVDYKVVHACTVKLASSSENFIGLVNLFSGGSLLQLSIFALGVMPY 60
Query: 221 IVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIY 280
I ASI++Q+L ++P L KEG G K+ Y ++++G AIL++ + + +++
Sbjct: 61 ITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLAILQSTTILVTARTGALF 120
Query: 281 A--------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
S+ ++V ++ G + W+ + I++ G GQG S++I + I +G+
Sbjct: 121 NYQCGNNIIPDGSMWSLIVMVLIMTGGTGLIMWMAELITDKGIGQGMSVLIFMSICSGFL 180
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
L+++ GS+ W F + + GV ++ ++ V R++ +QY +
Sbjct: 181 PKLWEIGWGTNGSNGDWNKFAI-VGGVLIVILIFVDFVELAQRRIPVQYTRRMIGRKMYG 239
Query: 393 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-SPFWQHVKEILNPETSVG 451
S Y+P +N SG+ P + + +LA P+++A S W + E N S
Sbjct: 240 GS-----STYLPLKVNMSGVIPPIFASSILAVPTLIAQFGDKSKAWVNWIE-ANLANSTS 293
Query: 452 ARPWVYYTIY-AFFVFLF 468
A +YT+ FF F +
Sbjct: 294 AWYIAFYTVMIVFFCFFY 311
>gi|213693068|ref|YP_002323654.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384200294|ref|YP_005586037.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213524529|gb|ACJ53276.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320459246|dbj|BAJ69867.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 445
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + + +++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYRCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGKNGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|242081045|ref|XP_002445291.1| hypothetical protein SORBIDRAFT_07g007870 [Sorghum bicolor]
gi|241941641|gb|EES14786.1| hypothetical protein SORBIDRAFT_07g007870 [Sorghum bicolor]
Length = 552
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 134 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 191
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI +A
Sbjct: 192 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIFQA 251
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 252 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 308
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F ++ + V V E RK+ L Y A
Sbjct: 309 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFFLLVLGIVYVQEAERKIPLNY-----A 361
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
S + + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 362 SRYSSRTGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFAGLDFLKKAAIALNP 420
>gi|407458911|ref|YP_006737014.1| preprotein translocase subunit secY [Chlamydia psittaci M56]
gi|405786120|gb|AFS24865.1| preprotein translocase subunit secY [Chlamydia psittaci M56]
Length = 457
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 169/348 (48%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ R+G FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREIRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A + S+P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDRGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + V +L+P + WVY + Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYF 342
>gi|357145358|ref|XP_003573616.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Brachypodium distachyon]
Length = 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 150/304 (49%), Gaps = 19/304 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + +V+SRIG ++PL G +R D S + G++D G
Sbjct: 130 FFKGPLPGKFLKLLGFLVLSRIGVYVPLGGVNREAFAGNLDQNSLL-GTLDSFSG-GGIG 187
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+GFAI++A
Sbjct: 188 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKILQYTRYASVGFAIVQA 247
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + PY S + V+ + LL G++ +++ +TISE G G+SL+I I
Sbjct: 248 IGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFLGETISELKLGNGTSLLIFTSI 304
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + +++ G + +L ++ F + + V V E RK+ L Y A
Sbjct: 305 ISYLPASFGRTVAE--GFQAGNYVGLLTIILSFFFLVLGIVYVQEAERKIPLNY-----A 357
Query: 388 S--AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
S ++R P + Y+PF +N SG+ P++ +T LA P+ LA G F + L
Sbjct: 358 SRYSSRTGGP--QRSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLDFLKKAAIALT 415
Query: 446 PETS 449
P S
Sbjct: 416 PGGS 419
>gi|288575868|ref|ZP_06394024.1| preprotein translocase, SecY subunit [Neisseria mucosa ATCC 25996]
gi|288566923|gb|EFC88483.1| preprotein translocase, SecY subunit [Neisseria mucosa ATCC 25996]
Length = 445
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 14/283 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y S +G + L F G+ + S
Sbjct: 25 GDLKKRLTFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERFS 84
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+ IVPSL L+KEG G + I Y + ++ AIL++ VA
Sbjct: 85 IFAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSFGVA 144
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + ++S++ + T LV G M + W+ + I+E G G G SLII GI G
Sbjct: 145 TFVFQQGV-VVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIAAGI 203
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 390
+S+LL + R + + ++ + ++ ++ VV E RKV + Y ++ S
Sbjct: 204 PSG----ISRLLALTSRGFGLPIAIV-IGALLLIYIVVYFESAQRKVPVHYAKRQVGSGV 258
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ S ++PF +N +G+ P + + ++ FPS L S G
Sbjct: 259 MQGS-----NTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFG 296
>gi|332637081|ref|ZP_08415944.1| preprotein translocase subunit SecY [Weissella cibaria KACC 11862]
Length = 435
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 168/343 (48%), Gaps = 31/343 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
L +VLN+ E +IR++LF T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLFFTLWILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 200 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ ++
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRYL 116
Query: 259 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++ A ++++ I A ++ L + +++ ++ F+L G M W+ + I+E G G
Sbjct: 117 TIVLAFVQSIGITAGFNQLSQVKLVETPNLETYLLIGFILTAGTMFAVWLGEMITERGLG 176
Query: 317 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 373
QG S++I GI+ +Y++ + L G R W F+ G+L +F +V + +
Sbjct: 177 QGVSMLIFAGIIARVPAGVYQLFKEHVLQGDDPARGWAFLAGILLIFILVIAFVTWFNQA 236
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
RK+ +QY + ++ + S Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKIPMQYT--RRSTGSGNSS-------YLPLKINVAGVIPVIFASSLLVTPQTILQAFA 287
Query: 434 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ F + + + L+ +T G +Y + LF F
Sbjct: 288 TKFADAGWYNTLMQYLSMQTMQGG------IVYTLLIVLFTFF 324
>gi|284049237|ref|YP_003399576.1| preprotein translocase subunit SecY [Acidaminococcus fermentans DSM
20731]
gi|283953458|gb|ADB48261.1| preprotein translocase, SecY subunit [Acidaminococcus fermentans
DSM 20731]
Length = 418
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 159/314 (50%), Gaps = 30/314 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
++S L+N ++ +E+R+++F T + ++ R G IP+PG + +I + F SG++
Sbjct: 1 MASALDNLLKA---TELRKKVFFTLAMFIVFRAGTQIPVPGVNAAMIER---LFTSGNLF 54
Query: 200 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L D GA K S F + I+P I ASI+ Q+L ++P+L + KEG +G +KI
Sbjct: 55 GLLDLFSGGALSKFSIFAMSITPYINASIITQLLTVVIPTLEEWSKEGAEGAKKINKINR 114
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASH-----SVKHVMVTAFLLVCGAMTMSWICDTIS 311
+ ++G ++A+ + Y + AA + S +++T L G++ + WI + I+
Sbjct: 115 YAAVGLGAIQAI-----GMAYGLRAAVNNPDFFSFAMIVIT---LTAGSLLLMWIGEQIT 166
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVV 370
G G G SLII GI++ L + L ++ + ++ +L V + M+ V +
Sbjct: 167 AKGIGNGISLIIFAGIISRLPNGLAVIGRYLQAGTINVFNVLIFAVLAVLMV--MFVVAI 224
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
T RKV +Q Y ++ T YIP +N +G+ P++ + +L FP +A
Sbjct: 225 TVAYRKVPVQ-YAKRIVGRKMYGGHTT----YIPLKVNQAGVMPIIFASSVLMFPVTIAQ 279
Query: 431 ILGSPFWQHVKEIL 444
+ P+ Q V L
Sbjct: 280 FIKIPWIQKVAGYL 293
>gi|406657891|ref|ZP_11066031.1| preprotein translocase subunit SecY [Streptococcus iniae 9117]
gi|405578106|gb|EKB52220.1| preprotein translocase subunit SecY [Streptococcus iniae 9117]
Length = 434
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 168/341 (49%), Gaps = 54/341 (15%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRHKIFYTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFVQS 126
Query: 268 V-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ S +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTI--VTMWAVVVTEGCRKVKL 379
GI++ + + + G+ ++ ++G+L +F I + + V + K+ +
Sbjct: 187 GIISSIPNAIANVHEDYFVNVRGNEMQTSYMIVGIL-IFAILAIVFFTTYVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY KL A S Y+P +NP+G+ PV+ + + PS + PF+Q+
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTII-----PFFQN 291
Query: 440 VK---------EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
K E+ N +T G +YAF + LF+ F
Sbjct: 292 GKDIPWLTKLQEVFNYQTPTGM------IVYAFLIILFSFF 326
>gi|332289208|ref|YP_004420060.1| preprotein translocase subunit SecY [Gallibacterium anatis UMN179]
gi|330432104|gb|AEC17163.1| preprotein translocase subunit SecY [Gallibacterium anatis UMN179]
Length = 441
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 154/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++RRL FV LIV RIG FIP+PG D ++ Q VD F GA +
Sbjct: 17 SELKRRLLFVLGALIVF-RIGSFIPVPGIDSAVLAQVIEQQKGTIVDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A ++A+ +
Sbjct: 76 SVFALGIMPYISASIIIQLLTSVYPALAELKKEGEAGRRKISKYTRYSTLALATIQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGVGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + Q + +L + VF VT + V V G R++ + Y A
Sbjct: 195 AGLPSAIAHTIEQARQGQMHLLVLLLIAVVVFA-VTYFVVFVERGQRRLVVNY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ + G + + +L
Sbjct: 249 RQQGRHMLAAQSSHLPLKVNMAGVIPAIFASSIILFPATITQWFGQGQGLDWLNDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLILYAVAIIFFSFF 329
>gi|419798092|ref|ZP_14323527.1| preprotein translocase, SecY subunit, partial [Neisseria sicca
VK64]
gi|385696101|gb|EIG26613.1| preprotein translocase, SecY subunit, partial [Neisseria sicca
VK64]
Length = 413
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 148/285 (51%), Gaps = 13/285 (4%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
++++RL F+ LIV RIG IP+PG D + + Y S +G + L F G+ +
Sbjct: 14 GDLKKRLTFLLGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERF 72
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL++ V
Sbjct: 73 SIFAIGIMPYISASIIVQLASEIIPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSFGV 132
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A + + ++S++ + T LV G M + W+ + I+E G G G SLII GI G
Sbjct: 133 ATFVFQQGV-VVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIAAG 191
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASA 389
+ ++L+ S+ + ++G ++ + VV E RKV + Y ++ S
Sbjct: 192 IPSGIARLLALTSQGSIGMPTAVSIVIGALLLI--YIVVYFESAQRKVPVHYAKRQVGSG 249
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ S ++PF +N +G+ P + + ++ FPS L S GS
Sbjct: 250 VMQGS-----NTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGS 289
>gi|300857799|ref|YP_003782782.1| preprotein translocase subunit [Corynebacterium pseudotuberculosis
FRC41]
gi|375287968|ref|YP_005122509.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 3/99-5]
gi|379714672|ref|YP_005303009.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 316]
gi|383313567|ref|YP_005374422.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis P54B96]
gi|384503987|ref|YP_005680657.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1002]
gi|384506076|ref|YP_005682745.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis C231]
gi|384508166|ref|YP_005684834.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis I19]
gi|384510261|ref|YP_005689839.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis PAT10]
gi|385806835|ref|YP_005843232.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 267]
gi|387135933|ref|YP_005691913.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 42/02-A]
gi|387137994|ref|YP_005693973.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387140022|ref|YP_005696000.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389849740|ref|YP_006351975.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 258]
gi|392399942|ref|YP_006436542.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis Cp162]
gi|300685253|gb|ADK28175.1| preprotein translocase subunit [Corynebacterium pseudotuberculosis
FRC41]
gi|302205536|gb|ADL09878.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis C231]
gi|302330091|gb|ADL20285.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1002]
gi|308275772|gb|ADO25671.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis I19]
gi|341824200|gb|AEK91721.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis PAT10]
gi|348606378|gb|AEP69651.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 42/02-A]
gi|349734472|gb|AEQ05950.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355391813|gb|AER68478.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1/06-A]
gi|371575257|gb|AEX38860.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 3/99-5]
gi|377653378|gb|AFB71727.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 316]
gi|380869068|gb|AFF21542.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis P54B96]
gi|383804228|gb|AFH51307.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 267]
gi|388247046|gb|AFK16037.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 258]
gi|390531020|gb|AFM06749.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis Cp162]
Length = 440
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 36/343 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGD 203
++F +++R+++ +T LIV+ RIG IP PG D I S S L
Sbjct: 6 QAFRDADLRKKILITLALIVLYRIGAQIPSPGVDYASISGRLRELTSDSSSVYSLINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +G+ P I ASI++Q+L ++P +L+KEG G K+ Y +++LG A
Sbjct: 66 GGALLQLSIFAIGVMPYITASIIVQLLTVVIPRFEELKKEGQSGQAKMDQYTRYLTLGLA 125
Query: 264 ILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + + + A V +++ ++ GAM + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADRKQLLGAGVQVLMPNAGLWTLIMLVLVMSAGAMLVMWLGEIITERGVG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SL+I GI T +L+ G I+ + V V +G R+
Sbjct: 186 NGMSLLIFAGIATRLPSDGANILNSSGGVVFAVVLVA------VIILVVGVVFVEQGQRR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP- 435
+ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIINSGS 294
Query: 436 ------FWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ +V + L +S W Y +Y + F+ F
Sbjct: 295 HEVSDNWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYF 332
>gi|386739737|ref|YP_006212917.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 31]
gi|384476431|gb|AFH90227.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 31]
Length = 396
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 36/343 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGD 203
++F +++R+++ +T LIV+ RIG IP PG D I S S L
Sbjct: 6 QAFRDADLRKKILITLALIVLYRIGAQIPSPGVDYASISGRLRELTSDSSSVYSLINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +G+ P I ASI++Q+L ++P +L+KEG G K+ Y +++LG A
Sbjct: 66 GGALLQLSIFAIGVMPYITASIIVQLLTVVIPRFEELKKEGQSGQAKMDQYTRYLTLGLA 125
Query: 264 ILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + + + A V +++ ++ GAM + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADRKQLLGAGVQVLMPNAGLWTLIMLVLVMSAGAMLVMWLGEIITERGVG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SL+I GI T +L+ G +L I+ + V V +G R+
Sbjct: 186 NGMSLLIFAGIATRLPSDGANILNSSGGVVFAV------VLVAVIILVVGVVFVEQGQRR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIINSGS 294
Query: 435 -----PFWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ +V + L +S W Y +Y + F+ F
Sbjct: 295 HEVSDSWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYF 332
>gi|158319563|ref|YP_001512070.1| preprotein translocase subunit SecY [Alkaliphilus oremlandii
OhILAs]
gi|158139762|gb|ABW18074.1| preprotein translocase, SecY subunit [Alkaliphilus oremlandii
OhILAs]
Length = 424
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 38/332 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 206
++RR++ T +++ I R+G IP+PG D + + VSG G FG
Sbjct: 13 DLRRKILYTFMMLAIFRLGSVIPVPGVDINYVKSIVNNAGLLSFFDLVSG-----GAFG- 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++ F L ISP I +SI+MQ+L +PSL L KEG +G +KI Y + ++ A+++
Sbjct: 67 --NMTIFALSISPYITSSIIMQLLTIAIPSLEALAKEGEEGSKKIAQYQRYATIILALIQ 124
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A ++ ++ + ++V L G + W+ + I+E G G G SL+I G
Sbjct: 125 ATGISVGLFRGALI--NQDTFSIIVVILTLTAGTAFLMWLGEQITEKGIGNGISLLIFAG 182
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY---- 381
I+ +L+ + L + + P + L V I + AVV E G RK+ +QY
Sbjct: 183 IIASLPSSLFTTFA--LTKAGQINPLAIILFIVIAIAMIVAVVAIEAGTRKIPVQYAKRV 240
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--FWQH 439
G K+ +IP +N SG+ PV+ LL FP +A +GS F +
Sbjct: 241 VGRKMYGGQSS---------HIPLKVNQSGVMPVIFAMSLLQFPHTIAYFIGSEGGFAKF 291
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L+P G ++Y + A + F F
Sbjct: 292 LNTWLSPTGMPGV--FIYNLLSAVLIIFFTYF 321
>gi|451943272|ref|YP_007463908.1| preprotein translocase subunit SecY [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451902659|gb|AGF71546.1| preprotein translocase subunit SecY [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 440
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 163/343 (47%), Gaps = 36/343 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY--LSFVSGSVDELGDF-- 204
++F ++R+++ T V+I++ R+G IP PG D I L+ GSV L +
Sbjct: 6 QAFKDVDLRKKIIFTVVMIILYRVGAQIPSPGVDYASISGRLRDLTQEEGSVYSLINLFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +G+ P I ASI++Q+L ++P +L+KEG G K+ Y +++L A
Sbjct: 66 GGALLQLSVFAIGVMPFITASIIVQLLTVVIPHFEELKKEGQSGQTKMNQYTRYLTLALA 125
Query: 264 ILE-AVIVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L+ A IVA + A ++ +++ ++ GA+ + W+ + I+E G G
Sbjct: 126 LLQSAGIVALADREQLLGAGIQVLDADRTIWDLLILVLVMTSGAILVMWLGELITEKGVG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SL+I GI T +LS G ++ I+ + V V +G R+
Sbjct: 186 NGMSLLIFAGIATRIPTDGMNILSNSGGL------VFAAVVAAVVILVIGVVFVEQGQRR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP- 435
+ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNSGT 294
Query: 436 ------FWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ +V + L +S W Y +Y + F+ F
Sbjct: 295 AVPPDNWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYF 332
>gi|114797687|ref|YP_761509.1| preprotein translocase subunit SecY [Hyphomonas neptunium ATCC
15444]
gi|114737861|gb|ABI75986.1| preprotein translocase, SecY subunit [Hyphomonas neptunium ATCC
15444]
Length = 451
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 32/349 (9%)
Query: 144 LNNAAESFFKS----------EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS- 192
+ NAAE ++ +++ R+ T ++V+ R+G FIP+PG D P Y +
Sbjct: 1 MANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLD----PSQYAAL 56
Query: 193 FVSGSVDELGDF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDG 247
F S S LG GA ++ F L + P I ASI++Q++ + PSL +L+KEG G
Sbjct: 57 FESQSSGILGSMNMFAGGAVERMGVFALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAG 116
Query: 248 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 307
++I Y +++LGFA+++A +A + + S S ++ L G M + W+
Sbjct: 117 RKQINQYTRYLTLGFALVQAFAIAGGLVAVRLEGIS-SWFFILTGVVTLTGGTMLLMWMG 175
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
+ I+ G G G SLII GI+ ++ +++Q +SV F+L ++ + + ++
Sbjct: 176 EQITARGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIG-FILAIVVMVIALVVFI 234
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V + R++ + Y + + ++P IN SG+ P + T LL P
Sbjct: 235 VFIERSQRRLIIHY-----PKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLT 289
Query: 428 LASILGSPFWQHVKEILNP-----ETSVGARPWVYYTIYAFFVFLFNIF 471
LG + T+ W Y YA V F F
Sbjct: 290 AVGFLGGNAADTEATGMTGVLGWLATNFAPGSWTYIVTYAVLVAFFAFF 338
>gi|403715743|ref|ZP_10941419.1| preprotein translocase SecY subunit [Kineosphaera limosa NBRC
100340]
gi|403210506|dbj|GAB96102.1| preprotein translocase SecY subunit [Kineosphaera limosa NBRC
100340]
Length = 437
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 41/351 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F E+R++L T ++ + R+G IP PG + + + +G ++L
Sbjct: 1 MLTAFGRAFTTPELRKKLLFTIFVMTLFRLGSHIPTPGVSYVAVQECRPA--AGQANQLL 58
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y
Sbjct: 59 GLANLFSGGALLQLSIFALGIMPYITASIIVQLLTVVIPRFETLKKEGQTGQAKLTQYTR 118
Query: 257 WISLGFAILEAVIVACYSL-PYSIYAASHSVK--------HVMVTAFLLVCGAMTMSWIC 307
++++G A+L++ ++ P ++ S+ + V + + G + W+
Sbjct: 119 YLTIGLAVLQSSTFVTFARNPAQLFPGSNCEQILVDDGFVTVAIMVLTMTAGTGLIMWMG 178
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
+ I+E G G G SL+I I G+ +L+ + + RW F+L +L ++ +
Sbjct: 179 ELITERGVGNGMSLLIFTSIAAGFPSSLWAIKQR----DGRWDTFILVILMGLALIAV-- 232
Query: 368 VVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
VV E C R++ +QY K R T YIP +N + + P++ LLA P
Sbjct: 233 VVFVEQCQRRIPVQYA--KRMVGRRMYGGTTT---YIPLKVNQANVIPIIFAASLLAIPG 287
Query: 427 ILASILGSPFWQHVKEI------LNPETSVGARPWVYYTIYAFFVFLFNIF 471
++ F+Q E+ + G PW Y IY + F F
Sbjct: 288 LVVQ-----FYQGRPEVPVWVEWIQAHLVRGDHPW-YMAIYVLLIVFFTFF 332
>gi|291457223|ref|ZP_06596613.1| preprotein translocase, SecY subunit [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|417941896|ref|ZP_12585177.1| Preprotein translocase, SecY subunit [Bifidobacterium breve CECT
7263]
gi|291381058|gb|EFE88576.1| preprotein translocase, SecY subunit [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|376167884|gb|EHS86703.1| Preprotein translocase, SecY subunit [Bifidobacterium breve CECT
7263]
Length = 445
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATTGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYKCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFF 332
>gi|297618364|ref|YP_003703523.1| preprotein translocase subunit SecY [Syntrophothermus lipocalidus
DSM 12680]
gi|297146201|gb|ADI02958.1| preprotein translocase, SecY subunit [Syntrophothermus lipocalidus
DSM 12680]
Length = 421
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 18/326 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
++R +L T ++++ R+G IP+PG + + + + + G D + GA + S F
Sbjct: 12 GDLRNKLLFTLGMLLVFRLGAHIPVPGINADVFAKLLTNQLFGFYDIISG-GAFKRFSIF 70
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
+ I+P I ASI+MQ+L ++P L QL+KEG +G +KI Y+ + ++ ++A+ +A
Sbjct: 71 AMSITPYINASIIMQLLTVVIPKLEQLQKEGEEGRKKITQYVRYGTVILGFIQAIGMAIA 130
Query: 274 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
Y + ++ A L G + WI + I+E G G G SLII GI+
Sbjct: 131 MGRYPGVLHKPGIGAYLIIAISLTAGTALLMWIGEMITEKGIGNGISLIIFAGIVARIPS 190
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
L M+ L ++ ++ +L + + ++ V V EG R++ +QY A
Sbjct: 191 GLNTMVELLKAGTIGFFN-ILSFVVIALVIISALVAVNEGQRRIPIQY-----AKRVVGR 244
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW---QHVKEILNPETSV 450
++P +N G+ P++ ++ FP+ +AS W V +N
Sbjct: 245 RVYGGQSTFLPLRVNMGGVIPIIFGMSIMMFPATIAS------WFPKSGVSTFINTYFHF 298
Query: 451 GARPWVYYTIYAFFVFLFNIFDIVSI 476
G +Y +YA +F F F + I
Sbjct: 299 GT--VLYNILYALLIFFFTYFYVAII 322
>gi|444348552|ref|ZP_21156179.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443546732|gb|ELT56347.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 343
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHFLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + ++P +N +G+ P + + ++ FP+ L +G
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQ 294
>gi|419850265|ref|ZP_14373268.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 35B]
gi|386409762|gb|EIJ24596.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 35B]
Length = 417
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|344337589|ref|ZP_08768523.1| preprotein translocase, SecY subunit [Thiocapsa marina 5811]
gi|343802542|gb|EGV20482.1| preprotein translocase, SecY subunit [Thiocapsa marina 5811]
Length = 450
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 149/325 (45%), Gaps = 16/325 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R RL +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 19 TELRARLLFVVGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERAS 78
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ++ +VP L QL+KEG G KI Y + ++ A +AV ++
Sbjct: 79 LFALGIMPYISASIIMQLMTSVVPKLEQLKKEGESGRRKITQYTRYGTVVLATFQAVGIS 138
Query: 272 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+L S V H V LV G M + W+ + I+E G G G SLII G
Sbjct: 139 M-ALQGQTAGGSALVSHAGMGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISLIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G L L +L + +L L + VT + V V G R++ + Y
Sbjct: 198 IVAGLPAALGGTL-ELARTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNY----- 251
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A + + ++P +N +G+ P + + ++ FP L GS + ++ + +
Sbjct: 252 ARRQQGRKMMQAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSS--EDMRWLADI 309
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
+ + +Y +YA + F F
Sbjct: 310 TSKLSPGEPIYVLLYAAAIIFFCFF 334
>gi|333980389|ref|YP_004518334.1| preprotein translocase subunit SecY [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823870|gb|AEG16533.1| preprotein translocase, SecY subunit [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 421
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 23/284 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 206
E+R +L T ++ + RIG IP+PG + + + + +SG GA
Sbjct: 13 ELRSKLLFTLAMLFVFRIGAHIPVPGVNTEVFAKLLETGALFGFFDVISG--------GA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F + I+P I ASI+MQ+L ++P+L +L KEG +G +KI Y ++++ A ++
Sbjct: 65 FKNFSIFAMSITPYINASIIMQLLTVVIPALERLAKEGEEGRKKIVQYTRYLTVVLAFIQ 124
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A+ ++ ++L S +V H ++ A L G + WI + I+E G G G SL+I G
Sbjct: 125 AIGIS-FALRNQHVLVSPTVGHYLLVALTLTAGTAFLMWIGEQITEKGIGNGISLLIFAG 183
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I++ +++ L ++ +L LL + +V V V EG R++ +QY
Sbjct: 184 IVSRVPAGAVRVVEYLQAGTINILSVIL-LLVIGALVIAAIVAVNEGQRRIPVQY----- 237
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A ++P +N +G+ PV+ + +L FP LA+
Sbjct: 238 AKRVVGRRVYGGQSTHLPLRVNQAGVIPVIFASSILMFPEQLAT 281
>gi|254805794|ref|YP_003084015.1| preprotein translocase subunit SecY [Neisseria meningitidis
alpha14]
gi|254669336|emb|CBA08387.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha14]
Length = 436
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQYT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|326332211|ref|ZP_08198491.1| preprotein translocase, SecY subunit [Nocardioidaceae bacterium
Broad-1]
gi|325949917|gb|EGD41977.1| preprotein translocase, SecY subunit [Nocardioidaceae bacterium
Broad-1]
Length = 436
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 26/302 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L +++VI R G IP PG + Q + +G L
Sbjct: 1 MLGAFASAFRTPDLRKKLLFVLLIVVIFRAGSQIPAPGVHVANVQQCLDAAQTGDSAGLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
+ GA L+L+ F LGI P I ASI++Q+L ++P L +L+KEG G KI Y
Sbjct: 61 NLVNLFSGGALLQLTIFALGIMPYITASIILQLLVVVIPRLERLKKEGQSGQTKITQYTR 120
Query: 257 WISLGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLV------CGAMTMSWICDT 309
+++LG A+L+A IVA + + + H TA LV G + W+ +
Sbjct: 121 YLTLGLAVLQATGIVALARSGDLLQGCTQPLLHDDGTATFLVMVVTMTAGTAVIMWLGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G S++I ++ + T++ + + WW F + + V + M AV+
Sbjct: 181 ITERGIGNGMSILIFTQVVATFPATMWA-----VKNDKGWWTFAIVI--VIGLAIMAAVI 233
Query: 370 -VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ + R++ +QY + S YIP +N +G+ PV+ + LL P++
Sbjct: 234 FIEQAQRRIPVQYARRMVGRKMFGGS-----STYIPLKVNQAGVIPVIFASSLLYLPAMA 288
Query: 429 AS 430
A
Sbjct: 289 AQ 290
>gi|345862671|ref|ZP_08814885.1| preprotein translocase subunit SecY [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345126013|gb|EGW55879.1| preprotein translocase subunit SecY [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 440
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 22/328 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R+RL A +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 12 TELRQRLLFVAGALLVFRIGTFIPVPGVNPVALAALFEQAQGSILDMFNMFSGGALERAS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ++ ++P L QL+KEG G KI Y + ++ A +AV ++
Sbjct: 72 LFALGIMPYISASIIMQLMTSVLPKLEQLKKEGEAGRRKITQYTRYGTVVLASFQAVGIS 131
Query: 272 CYSLPYSIYA----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
SI A V V+ A LV G M + W+ + I+E G G G S+II GI
Sbjct: 132 IALQSQSIGGQSVVAQQGVGFVVTAAVSLVTGTMFLMWLGEQITERGIGNGISMIIFAGI 191
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ G + L + ++ L + VT + V V G R++ + Y A
Sbjct: 192 VAGLPSAIGGTLELARTGELNVLTILV-LFALAIAVTGFVVFVERGQRRITVNY-----A 245
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEI 443
+ + ++P +N +G+ P + + ++ FP+ L G+ + Q +
Sbjct: 246 KRQQGRRLMQAQSSHLPLKLNMAGVIPPIFASSIILFPATLGQWFGNSEETRWLQDIFSK 305
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P P VY YA + F F
Sbjct: 306 LSP-----GEP-VYVMAYAAAIIFFCFF 327
>gi|57234767|ref|YP_181238.1| preprotein translocase subunit SecY [Dehalococcoides ethenogenes
195]
gi|57225215|gb|AAW40272.1| preprotein translocase, SecY subunit [Dehalococcoides ethenogenes
195]
Length = 438
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 163/346 (47%), Gaps = 38/346 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L ++F ++RRRL +T ++V +R +PLPG D + QD +G++ L
Sbjct: 10 LLQAMIDAFSLPDLRRRLLITLGILVAARFIAHVPLPGVDSAAL-QDLFD-QNGALGMLD 67
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F GA S LG+ P I ASI+M +L ++P L L KEG G KI + W+++
Sbjct: 68 LFSGGAMRYFSVAALGVYPYITASIIMTLLTPVIPKLTALSKEGEAGRNKINTITHWLAV 127
Query: 261 GFAILEAVIVACYS--LPYSIYAASHSVKHVMVTAFLL--VCGAMTMSWICDTISESGFG 316
A L A YS L A + + A +L V G M M W+ + I+ G G
Sbjct: 128 PTAAL-----AGYSQLLLLQREGAVAQTEPLAAVAIVLSIVAGTMFMVWLGEQITNYGIG 182
Query: 317 QGSSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G SLII GI+ G +T+ + L Q G +V ++ + T V + V+ TE
Sbjct: 183 NGISLIIFAGIVAGLPDTIGRGLMASDQFAGLAV------YAIMALLTTVLI--VIFTEA 234
Query: 374 CRKVKLQYYGFKLASAA--REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS- 430
R++ +QY + S R E +IP +N +GM P++ + L+ P ++AS
Sbjct: 235 HRRIPVQYAQTVIRSGKMYRRGG-----ESHIPLRVNSAGMIPLIFASALVMLPGLVASY 289
Query: 431 -ILGSP----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ GS FW + I + S+ VY+ +Y F +F F
Sbjct: 290 FMAGSTEDPNFWNTIYNIFSSSASMPGG-LVYWGLYFFMTIIFAFF 334
>gi|419847796|ref|ZP_14370950.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
gi|386410041|gb|EIJ24853.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
Length = 456
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 24/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGKNGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|319944775|ref|ZP_08019039.1| preprotein translocase subunit SecY [Lautropia mirabilis ATCC
51599]
gi|319742024|gb|EFV94447.1| preprotein translocase subunit SecY [Lautropia mirabilis ATCC
51599]
Length = 446
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 10/330 (3%)
Query: 146 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF- 204
A E+ +++RRL + +V+ RIG IP+PG + + + + + G + F
Sbjct: 8 QAREANKYGDLKRRLVFLLLALVVFRIGTHIPVPGINPDAMAELFGNQEGGVLGLFNLFS 67
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA + S F LGI P I ASI+MQ+L +VPSL Q++KEG G I Y W +L A
Sbjct: 68 GGALSRFSVFALGIMPYISASIIMQLLTVVVPSLDQIKKEGEAGRRIITKYTRWATLALA 127
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+A+ ++ + +V LV G M + W+ + I+E G G G SLII
Sbjct: 128 TFQALGISVALESQGNLVSDPGFMFRVVAVISLVTGTMFLMWLGEQITERGLGNGISLII 187
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
GI++G + M S + ++ ++ ++ + +VT + V + G R++ + Y
Sbjct: 188 FSGIVSGLPGAIGGMGSLVSNGNMNPVAALI-IMALVILVTAFVVFIERGQRRITINYAK 246
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH--VK 441
++ + + Y+P +N +G+ P + + ++ FP+ LA S ++ V+
Sbjct: 247 RQVGNKIYQGQ-----TSYLPLKLNMAGVIPPIFASSIILFPATLAQWFTSGDSENVAVR 301
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + ++ VY +YA + F F
Sbjct: 302 TLRDVAATLSPGQPVYMLLYAIAIIFFCFF 331
>gi|419852233|ref|ZP_14375126.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 2-2B]
gi|386411510|gb|EIJ26233.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 2-2B]
Length = 407
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 24/332 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDFGAE 207
E+R+++ +I++ RIG FIP PG D ++ + + S S + L GA
Sbjct: 5 KELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLFSGGAM 64
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A+L++
Sbjct: 65 LQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLAVLQS 124
Query: 268 VIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+ A ++ SV +++V ++ G + W+ + +++ G GQG S
Sbjct: 125 TTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGIGQGMS 184
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKL 379
++I + I +G+ L+++ G+ W F + + + I+ V E C R+V +
Sbjct: 185 ILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQRRVPV 242
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 243 QYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGKSDQSW 296
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 297 VKWI-NANLANTTSVW-YIALYALMIVFFCFF 326
>gi|15605239|ref|NP_220025.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/UW-3/CX]
gi|237802939|ref|YP_002888133.1| preprotein translocase subunit SecY [Chlamydia trachomatis
B/Jali20/OT]
gi|255311328|ref|ZP_05353898.1| preprotein translocase subunit SecY [Chlamydia trachomatis 6276]
gi|255317629|ref|ZP_05358875.1| preprotein translocase subunit SecY [Chlamydia trachomatis 6276s]
gi|376282520|ref|YP_005156346.1| protein translocase subunit [Chlamydia trachomatis A2497]
gi|385240038|ref|YP_005807880.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9768]
gi|385240963|ref|YP_005808804.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11222]
gi|385242816|ref|YP_005810655.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9301]
gi|385243717|ref|YP_005811563.1| Protein translocase subunit [Chlamydia trachomatis D-EC]
gi|385244597|ref|YP_005812441.1| Protein translocase subunit [Chlamydia trachomatis D-LC]
gi|385246425|ref|YP_005815247.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11074]
gi|385270212|ref|YP_005813372.1| Protein translocase subunit [Chlamydia trachomatis A2497]
gi|7404464|sp|P28539.3|SECY_CHLTR RecName: Full=Protein translocase subunit SecY
gi|3328947|gb|AAC68111.1| Translocase [Chlamydia trachomatis D/UW-3/CX]
gi|231274173|emb|CAX10967.1| protein translocase subunit [Chlamydia trachomatis B/Jali20/OT]
gi|296436043|gb|ADH18217.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9768]
gi|296436971|gb|ADH19141.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11222]
gi|296437904|gb|ADH20065.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11074]
gi|297140404|gb|ADH97162.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9301]
gi|297748640|gb|ADI51186.1| SecY [Chlamydia trachomatis D-EC]
gi|297749520|gb|ADI52198.1| SecY [Chlamydia trachomatis D-LC]
gi|347975352|gb|AEP35373.1| SecY [Chlamydia trachomatis A2497]
gi|371908550|emb|CAX09180.1| protein translocase subunit [Chlamydia trachomatis A2497]
gi|438690445|emb|CCP49702.1| preprotein translocase subunit SecY [Chlamydia trachomatis A/7249]
gi|438691530|emb|CCP48804.1| preprotein translocase subunit SecY [Chlamydia trachomatis A/5291]
gi|438692903|emb|CCP47905.1| preprotein translocase subunit SecY [Chlamydia trachomatis A/363]
gi|440525434|emb|CCP50685.1| preprotein translocase subunit SecY [Chlamydia trachomatis
K/SotonK1]
gi|440528111|emb|CCP53595.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/SotonD5]
gi|440529001|emb|CCP54485.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/SotonD6]
gi|440532575|emb|CCP58085.1| preprotein translocase subunit SecY [Chlamydia trachomatis
G/SotonG1]
Length = 457
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 174/345 (50%), Gaps = 37/345 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ + L S + + + +L+P + V Y+I+ + +F
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIF 338
>gi|443673905|ref|ZP_21138951.1| Preprotein translocase subunit secY [Rhodococcus sp. AW25M09]
gi|443413505|emb|CCQ17289.1| Preprotein translocase subunit secY [Rhodococcus sp. AW25M09]
Length = 440
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 159/335 (47%), Gaps = 34/335 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 208
++RR++ T L+ + R G +P PG D R I Q +G S+ L GA L
Sbjct: 13 DLRRKILFTLGLVALYRFGATLPSPGVDYANVRACIDQVSGGDSAGIYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+A
Sbjct: 73 QLSVFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQAT 132
Query: 269 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+VA S + A S+ +++ ++ GA + W + I+E G G G SL
Sbjct: 133 GLVALASRGQLLQGCQQDIIADQSIFGLVIIVLVMTAGAAVVMWFGEVITERGVGNGMSL 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI + +LS G + F F I+T V V +G R++ +QY
Sbjct: 193 LIFAGIASRIPSEGNSILSSRGGLVFGFVCF-----AAFLIIT-GVVFVEQGQRRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------P 435
+ S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 247 AKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTSASTAADPS 301
Query: 436 FWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + + ++NP V +++ + FF + +
Sbjct: 302 WWQRIINEYLVNPANPV--YIAIFFGLIVFFTYFY 334
>gi|312140898|ref|YP_004008234.1| preprotein translocase secy [Rhodococcus equi 103S]
gi|325675464|ref|ZP_08155148.1| preprotein translocase subunit SecY [Rhodococcus equi ATCC 33707]
gi|311890237|emb|CBH49555.1| preprotein translocase SecY [Rhodococcus equi 103S]
gi|325553435|gb|EGD23113.1| preprotein translocase subunit SecY [Rhodococcus equi ATCC 33707]
Length = 440
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 34/335 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 208
++RR++ T L+ + R+G +P PG D R I Q +G S+ L GA L
Sbjct: 13 DLRRKILFTLGLVALYRLGATLPSPGVDYGNVRACIDQVSGGESAGIYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL++
Sbjct: 73 QLSVFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQST 132
Query: 269 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
IVA + + A SV +++ ++ GA + W + I+E G G G SL
Sbjct: 133 GIVALAARGQLLQGCSQPIIADESVFGLIIIVLVMTAGAALVMWFGELITERGVGNGMSL 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI + +L G + F L + I+ V V +G R++ +QY
Sbjct: 193 LIFAGIASRIPSEGKAILDSRGGLT-----FALVCVAALAIIA-GVVFVEQGQRRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------P 435
+ S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 247 AKRMVGRRMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTGANTSTDPS 301
Query: 436 FWQH-VKE-ILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + E ++NP V +Y+ + FF + +
Sbjct: 302 WWQRFINEYLVNPANPV--YILIYFGMIVFFTYFY 334
>gi|78211910|ref|YP_380689.1| preprotein translocase subunit SecY [Synechococcus sp. CC9605]
gi|78196369|gb|ABB34134.1| SecY protein [Synechococcus sp. CC9605]
Length = 439
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 144/303 (47%), Gaps = 18/303 (5%)
Query: 175 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 232
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 233 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 291
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVVFAMILRQYAVEGLSE-VTFVVQ 160
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 351
TA LV G+M + W+ + I+E G GQG+SL+I + I+ TL +
Sbjct: 161 TALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 352 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE-DSP--ITEVEPYIPFNIN 408
++ L+ VF + + V EG R++ + SA R+ P + + Y+P +N
Sbjct: 221 GIIVLVLVFLATIVGIIFVQEGARRI-------PIVSAKRQVGGPGVLPTRQSYLPLKLN 273
Query: 409 PSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
G+ P++ + L+ P +A++ S + LNP A PW Y + + F
Sbjct: 274 AGGVMPIIFASALIFLPVTIANLTKSEWLIRAASALNPGA---ANPWPYALTFFALILGF 330
Query: 469 NIF 471
+ F
Sbjct: 331 SYF 333
>gi|167036820|ref|YP_001664398.1| preprotein translocase subunit SecY [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039539|ref|YP_001662524.1| preprotein translocase subunit SecY [Thermoanaerobacter sp. X514]
gi|256752651|ref|ZP_05493503.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300915210|ref|ZP_07132525.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X561]
gi|307725134|ref|YP_003904885.1| preprotein translocase subunit SecY [Thermoanaerobacter sp. X513]
gi|320115242|ref|YP_004185401.1| preprotein translocase subunit SecY [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853779|gb|ABY92188.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X514]
gi|166855654|gb|ABY94062.1| preprotein translocase, SecY subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256748471|gb|EEU61523.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300888934|gb|EFK84081.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X561]
gi|307582195|gb|ADN55594.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X513]
gi|319928333|gb|ADV79018.1| preprotein translocase, SecY subunit [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 418
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 147/295 (49%), Gaps = 20/295 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
++R+R+ T ++VI R+G IP+PG D ++I + G G F GA
Sbjct: 12 DDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIAN-----ILGQGQLFGFFDIISGGAFS 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ F + I+P I ASI+MQ+L +PSL QL KEG +G +KI Y ++++ A+++A+
Sbjct: 67 NFTIFAMSITPYINASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ I ++ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLKSAVINPTFFNLTVIVIT---LTAGTAFLMWLGEKITENGIGNGSSLIIFAGII 183
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ +Y + SQ + + + + I+ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIY-LTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQY-----AK 237
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKE 442
+IP IN +G+ P++ LL FP LA+ S F+ V++
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQK 292
>gi|385850432|ref|YP_005896947.1| preprotein translocase subunit SecY [Neisseria meningitidis
M04-240196]
gi|325205255|gb|ADZ00708.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M04-240196]
Length = 436
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|325267156|ref|ZP_08133824.1| preprotein translocase subunit SecY [Kingella denitrificans ATCC
33394]
gi|324981394|gb|EGC17038.1| preprotein translocase subunit SecY [Kingella denitrificans ATCC
33394]
Length = 429
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 147/285 (51%), Gaps = 16/285 (5%)
Query: 155 EIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++R+R LF+ LIV RIG +P+PG D + Q Y G + L F G+ + S
Sbjct: 18 DLRKRFLFLLGALIVF-RIGAHVPVPGVDAAALAQLYKDQGGGILGMLNMFSGGSLERFS 76
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI+MQ+ IVPSL L+KEG G + I Y ++ A +++ VA
Sbjct: 77 IFAIGIMPYISASIIMQLAAEIVPSLKSLKKEGEAGKKVITKYTRIGTVALAAAQSIGVA 136
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ L I ++ + T LV G M + W+ + I+E G G G SL+I GI+ G
Sbjct: 137 TFLLQRQIVVIPQ-IEFYISTVSCLVGGTMFLMWLGEQITERGLGNGISLLITAGIIAGV 195
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 390
+ ++ S + +++ + ++G+ ++ +AVV E RK+ + Y A
Sbjct: 196 PAGVIQLWSLITEQTIQPLTAIGIVIGILLMI--YAVVYFESALRKIPIHY-------AK 246
Query: 391 REDSPIT-EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+ + ++PF +N +G+ P + + ++ FPS+LA LG+
Sbjct: 247 RQTGLYSAHKNTHMPFKLNMAGVIPPIFASSVIMFPSMLAGWLGN 291
>gi|116749010|ref|YP_845697.1| preprotein translocase subunit SecY [Syntrophobacter fumaroxidans
MPOB]
gi|116698074|gb|ABK17262.1| protein translocase subunit secY/sec61 alpha [Syntrophobacter
fumaroxidans MPOB]
Length = 435
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 147/325 (45%), Gaps = 21/325 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E++RR+ VT L+ + R+G IP PG + + + +SG++ L D GA +LS
Sbjct: 13 ELKRRILVTLALLAVYRVGAHIPTPGINGDAL-AAFFKQLSGTLLGLFDMFSGGALSQLS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L ++P+L +L KEG G KI Y + ++ ++++ +
Sbjct: 72 VFSLGIMPYISASIILQLLTVVIPTLERLSKEGDAGRRKITQYTRYGTVILSVIQGFAIG 131
Query: 272 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ V H + T L G + W+ + I+E G G G SLII G
Sbjct: 132 VGLEGMTGPGGEIVVLHPGWGFRLTTVLTLTAGTAFIMWLGEQITERGIGNGISLIIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G L + + + + +LGL V + + G R++ +QY
Sbjct: 192 IVAGIPNALENTVRMVTMGEMSAF-LLLGLAAFMLAVVAVIIFMERGQRRIPVQY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A +IP IN SG+ P + + ++ FP + S + +P+ + + L P
Sbjct: 246 AKRVVGRRVYGGQNTHIPLKINTSGVIPPIFASSIMMFPGTVGSFIKTPWMEWIANALGP 305
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
W++ +Y + F F
Sbjct: 306 GQ------WLHSILYVALIVFFCFF 324
>gi|313891550|ref|ZP_07825160.1| preprotein translocase, SecY subunit [Dialister microaerophilus
UPII 345-E]
gi|329121848|ref|ZP_08250463.1| preprotein translocase subunit SecY [Dialister micraerophilus DSM
19965]
gi|313120009|gb|EFR43191.1| preprotein translocase, SecY subunit [Dialister microaerophilus
UPII 345-E]
gi|327467786|gb|EGF13278.1| preprotein translocase subunit SecY [Dialister micraerophilus DSM
19965]
Length = 420
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 158/328 (48%), Gaps = 21/328 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A F E++ R+ T V+ VI R+G IP+PG D +I F SG++ D
Sbjct: 6 ANIFANKELKDRILFTFVMFVIFRLGVHIPVPGVDSSVIES---LFTSGNIFGFLDLFSG 62
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA K S F + I+P I +SI+MQ+L ++P+L + +K+G +G++KI+ + ++ A
Sbjct: 63 GALSKFSLFAMSITPYINSSIIMQLLTAVIPTLEEWQKDGQEGYKKIQKVTRYFTVVLAF 122
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++A +A Y+L + +S + +L G + WI + I+E G G G SLII
Sbjct: 123 IQAFGMA-YALRANNALLDNSWFFLFFIVIVLTAGTCLLVWIGEQITEKGIGNGISLIIF 181
Query: 325 VGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
GI+ + E ++ L +G+ + ++G+ I+ + + V E R++ +QY
Sbjct: 182 CGIVARFPEAASTIVDYLKVGTITPLQALLFVVIGLAMILVV--IAVNEAQRRIPVQY-- 237
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
A ++P +N +G+ P++ + ++ P LA + H+ +
Sbjct: 238 ---AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSIIMMPVTLAQFV------HINWV 288
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ T G W +Y +F+F F
Sbjct: 289 KSLATLFGWGTWPNTILYGILIFMFTYF 316
>gi|345018515|ref|YP_004820868.1| preprotein translocase subunit SecY [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033858|gb|AEM79584.1| preprotein translocase, SecY subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 418
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 20/295 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
+IR+R+ T ++VI R+G IP+PG D +LI Q + G G F GA
Sbjct: 12 DDIRKRILYTLGMLVIFRLGSHIPVPGVDPKLIAQ-----ILGQGQLFGFFDIISGGAFR 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 EFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ I ++ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLKSAVINPTFFNLTVIVIT---LTAGTAFLMWLGEKITENGIGNGSSLIIFAGII 183
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ +Y + S+ + + + + I+ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIY-LTSEYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQY-----AK 237
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKE 442
+IP IN +G+ P++ LL FP LA+ S F+ V++
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQK 292
>gi|374619078|ref|ZP_09691612.1| protein translocase subunit secY/sec61 alpha [gamma proteobacterium
HIMB55]
gi|374302305|gb|EHQ56489.1| protein translocase subunit secY/sec61 alpha [gamma proteobacterium
HIMB55]
Length = 441
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVD 199
+NNA E+ RL V ++I RIG IP+PG D L Q+ G++
Sbjct: 8 MNNAG----MGELFSRLRFVLVALIIYRIGTHIPVPGIDPAQLSALFDQN-----QGTIL 58
Query: 200 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L + GA ++S LGI P I ASI+MQ++ + P L ++KEG G +KI +
Sbjct: 59 GLANVFSGGALERMSILALGILPYISASIIMQLMTAVTPELDAIKKEGESGRKKISQWTR 118
Query: 257 WISLGFAILEA----VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
++++G A+++ V +A L Y AS + +T+ LV GA+ M W+ + I+E
Sbjct: 119 YLTVGLALVQGTGMTVGLANQGLTYD---ASLGFYVIAITS--LVTGAVFMMWLGEQITE 173
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I GI+ G + + + L Q + +LG+L + +V + +
Sbjct: 174 KGIGNGISLLIFAGIVAGLPQAIGQSLEQARQGELNIL-ILLGVLALAIVVIALVIFIER 232
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEP--YIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + Y A R+ P ++P +N +G+ P + + +L FP+ +A
Sbjct: 233 GQRRITVNY-------AKRQQGRQMYQAPASHLPLKVNMAGVIPAIFASSILLFPASVAQ 285
Query: 431 ILGS 434
GS
Sbjct: 286 WFGS 289
>gi|91200686|emb|CAJ73737.1| strongly similar to preprotein translocase SecY subunit [Candidatus
Kuenenia stuttgartiensis]
Length = 460
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 30/293 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
E+R+++ +T LI + R+G ++P+PG D ++ + F + +L GA
Sbjct: 13 ELRKKVLITLGLIALCRVGVYLPIPGIDTTVLKSYFNQFSQSGIGQLLGMVDMFAGGAMS 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ F LG+ P I ASI+ Q+L +VP L +L+KEG G +KI Y ++G + +A
Sbjct: 73 SGAIFGLGVMPYISASIIFQLLVGVVPYLERLQKEGEVGRKKINQYTRIATVGLCLFQAF 132
Query: 269 IV--ACYSLPYS----IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
++ Y++ ++ I V ++ A LL G M + WI + I E G G G S++
Sbjct: 133 VMTRTLYTVEFNGVPVIPVYLQGVSFQLMAAILLTTGTMILMWIGEQIEEHGIGSGISIV 192
Query: 323 ICVGILTGYTETLYKMLSQLLGS---SVRWWPFMLG------LLGVFTIVTMWAVVVTEG 373
I VGI+ E L +Q++ + SV +G LLG+F + V +T+G
Sbjct: 193 IMVGII----ERLPWAFNQIVQNFTFSVAPAEHQIGIVKLLILLGMFFAIVGGVVYITQG 248
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
R++ +Q A R ++P +N +G+ P++ LL FP+
Sbjct: 249 QRRIPIQQ-----AKHTRGRRVYGGQRHFLPLRVNQAGVMPIIFAQSLLIFPA 296
>gi|412986227|emb|CCO17427.1| preprotein translocase subunit SecY [Bathycoccus prasinos]
Length = 558
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 165 VLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---VDELGDFGAELKLSFFQLGISPQI 221
L+V+SRIG +IP+ G DR + LS G VD L G+ KL F LGI P I
Sbjct: 155 ALLVVSRIGAYIPISGVDRTAFAES-LSNTGGVMSYVDTLTG-GSISKLGIFSLGIVPFI 212
Query: 222 VASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIY 280
+SI+ Q+L + P L +L+K EG G + Y + +L FA+++AV Y P Y
Sbjct: 213 NSSIIFQLLSSVFPELQKLQKEEGESGRRQFMQYQRYGALAFALIQAVGQCLYVRP---Y 269
Query: 281 AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLS 340
SV + + +L GAM + +I + ++E G G+SL+I I++ ++ + +
Sbjct: 270 VDDFSVMWLAESTAVLTAGAMILMYIGEVLNELKLGNGTSLLIFANIVSSLPSSIGQTVE 329
Query: 341 QLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQY-YGFKLASAAREDSPITE 398
Q + F L + G F + T+ V V E RK+ +QY F A S
Sbjct: 330 Q--SKTDGNGAFTLAVFFGAFLLSTLGVVYVQEAERKIPMQYSTKFNSQGAGLSKS---- 383
Query: 399 VEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
Y+PF +N +G+ P++ ++ L+A P+ LA
Sbjct: 384 --SYLPFKVNSAGVMPIIFSSSLMALPATLA 412
>gi|326390642|ref|ZP_08212197.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392939557|ref|ZP_10305201.1| preprotein translocase, SecY subunit [Thermoanaerobacter
siderophilus SR4]
gi|325993320|gb|EGD51757.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392291307|gb|EIV99750.1| preprotein translocase, SecY subunit [Thermoanaerobacter
siderophilus SR4]
Length = 418
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 147/295 (49%), Gaps = 20/295 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
+IR+R+ T ++VI R+G IP+PG D +LI Q + G G F GA
Sbjct: 12 DDIRKRILYTLGMLVIFRLGSHIPVPGVDPKLIAQ-----ILGQGQLFGFFDIISGGAFR 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 EFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + ++ V L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 ---GMTIGLKRAVINPTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFAGII 183
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ +Y + S+ + + + + I+ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIY-LTSEYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQY-----AK 237
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKE 442
+IP IN +G+ P++ LL FP LA+ S F+ V++
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQK 292
>gi|22297643|ref|NP_680890.1| preprotein translocase subunit SecY [Thermosynechococcus elongatus
BP-1]
gi|22293820|dbj|BAC07652.1| preprotein translocase SecY subunit [Thermosynechococcus elongatus
BP-1]
Length = 436
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 163/342 (47%), Gaps = 37/342 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
A E+F + + +R RL +T L+++ R+G ++P+PG DR + Q+ ++
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITIGLLILVRLGIYLPIPGIDRAVFAQNVQDNAVIRFLDI 69
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
G L F LGI P I ASI+MQ+L +PSL +L+K EG G KI ++++
Sbjct: 70 FAGGGLSALGIFALGILPYINASIIMQLLTAALPSLERLQKDEGEAGRRKISQITRYVAV 129
Query: 261 GFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQ 317
G+A+L++ +A + S+P AA H + L L G+M + WI + I+E G G
Sbjct: 130 GWAVLQSFGIAIFVSSIP---GAALHPGPWFVAEIVLGLTAGSMVVMWISELITERGVGN 186
Query: 318 GSSLIICVGILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
G+SL+I + I+ G T L + + G ++ L+ VF + + V V
Sbjct: 187 GASLLIFLSIVAYLPASVGQTIALAESGGNIGGIAI--------LVAVFLAMIVGIVFVQ 238
Query: 372 EGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
EG R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 239 EGTRRI-------PIVSARRQVGRKLYREQTSYLPLRLNQGGVMPIIFASAVLILPSTLA 291
Query: 430 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S ++P G PW+Y Y + F+ F
Sbjct: 292 QFTRSELVARFASYVSPA---GPTPWLYVIFYLLLILFFSYF 330
>gi|410658508|ref|YP_006910879.1| Preprotein translocase secY subunit [Dehalobacter sp. DCA]
gi|410661495|ref|YP_006913866.1| Preprotein translocase secY subunit [Dehalobacter sp. CF]
gi|409020863|gb|AFV02894.1| Preprotein translocase secY subunit [Dehalobacter sp. DCA]
gi|409023851|gb|AFV05881.1| Preprotein translocase secY subunit [Dehalobacter sp. CF]
Length = 429
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 161/335 (48%), Gaps = 17/335 (5%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +++ IR+++ T ++++I RIG IP+P DR ++ Q+ + G D
Sbjct: 2 ILETLKDAWKVPSIRKKIGFTLLMLLIFRIGSHIPIPFMDREVL-QNMMG-SGGLFDFFN 59
Query: 203 DF-GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--I 258
F G LK S F L I P I ASI++Q+L ++P L +L KEG G +KI Y + +
Sbjct: 60 TFSGGSLKRFSVFSLSIMPYITASIIIQLLTVVIPYLERLSKEGDQGRKKIVQYTRYGTV 119
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
LGF + + +I S + ++ A +L G + W+ + I+E G G G
Sbjct: 120 VLGFINGFGLTIGLRG-ALTIPQESLRILIYIMIAIVLTAGTAFLMWLGEQITEKGIGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SLII GI+ G + + K L LL W ++GL+ + ++ V + EG R++
Sbjct: 179 ISLIIFAGIVAGIPDAI-KYLVGLLQVGEIGWISIVGLVVIAALIIAAVVFIQEGQRRIP 237
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 436
+QY A +IP +N +G+ P++ L+AFP+ +A+ L S F
Sbjct: 238 VQY-----AKRVVGRKQYGGQSSHIPLKVNQAGVIPIIFGISLMAFPATIATWLPQDSAF 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++ L S + P Y +YA + F F
Sbjct: 293 ALFAQKWLQMNGSAYSIP--YLIMYALLIIFFTYF 325
>gi|319639569|ref|ZP_07994316.1| preprotein translocase SECY subunit [Neisseria mucosa C102]
gi|317399140|gb|EFV79814.1| preprotein translocase SECY subunit [Neisseria mucosa C102]
Length = 437
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 14 GDLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I +SI++Q+ I+PSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 74 IFAIGIMPYISSSIIVQLASEIIPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + S H+ T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 134 TFVYQQGVVVTSSLEFHIS-TVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGI 192
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 390
+ ++L+ S+ + ++G+ +V +AVV E RKV + Y + S
Sbjct: 193 PSGIVRLLTLTEQGSMSMLMAVSIVIGILLLV--YAVVYFESAQRKVPVHYAKRQFGSGM 250
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
I ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 251 MPGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 289
>gi|260435196|ref|ZP_05789166.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8109]
gi|260413070|gb|EEX06366.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8109]
Length = 439
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 12/300 (4%)
Query: 175 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 232
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 233 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 291
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVVFAMILRQYAVEGLSE-VAFVVQ 160
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 351
TA LV G+M + W+ + I+E G GQG+SL+I + I+ TL +
Sbjct: 161 TALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 352 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSG 411
++ L+ VF + + V EG R++ + ++ A + + Y+P +N G
Sbjct: 221 GIIVLVLVFLATIVGIIFVQEGARRIPIVSAKRQVGGAGV----LPTRQSYLPLKLNAGG 276
Query: 412 MQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ P++ + L+ P +A++ S + LNP A PW Y + + F+ F
Sbjct: 277 VMPIIFASALIFLPVTIANLTKSEWLIRAASALNPGA---ANPWPYALTFFALILGFSYF 333
>gi|269214265|ref|ZP_05986197.2| preprotein translocase, SecY subunit [Neisseria lactamica ATCC
23970]
gi|269210297|gb|EEZ76752.1| preprotein translocase, SecY subunit [Neisseria lactamica ATCC
23970]
Length = 427
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 16/286 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y S G + L F G+ + S
Sbjct: 5 GDLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGGGILGMLNMFSGGSLERFS 64
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA
Sbjct: 65 IFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKLITKYTRYGTVLLAILQSLGVA 124
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ I S S + + T LV G M + W+ + I+E G G G SLII GI +G
Sbjct: 125 SFVFQRGIVVTS-SFEFYVSTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGI 183
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQYYGFKLASA 389
+ ++++ + ++ ++ LL VF ++ + +VV RK+ + Y A
Sbjct: 184 PSGITRLVAFVNQGTMS---ILMALLIVFGVLLLIYLVVYFESAQRKIPIHY-------A 233
Query: 390 ARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+ +S + ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 234 KRQFNSGLGNHNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 279
>gi|237653976|ref|YP_002890290.1| preprotein translocase subunit SecY [Thauera sp. MZ1T]
gi|237625223|gb|ACR01913.1| preprotein translocase, SecY subunit [Thauera sp. MZ1T]
Length = 441
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 153/325 (47%), Gaps = 20/325 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--SVDELGDFGAELKLS 211
+++RRL +++ RIG IP+PG D + + + + S G V L GA + +
Sbjct: 15 GDLKRRLLFLVGALIVYRIGAHIPVPGIDPQGLAELFQSQQGGILGVFNLFSGGALSRFT 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ++ VPSL L+KEG G KI Y + +L A+ +A+ +A
Sbjct: 75 IFALGIMPYISASIIMQLMTVAVPSLEALKKEGEAGRRKITQYTRYGTLVLALAQALGIA 134
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + VT LV G M + W+ + I+E G G G S+II GI+ G
Sbjct: 135 IALEGQAGLVLEPGLMFRFVTVATLVTGTMFLMWLGEQITERGIGNGISMIIFAGIIAGL 194
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ + + ++ PF + + + VT + V V G RK+ + Y ++ +
Sbjct: 195 PAAIGGLFELVRTGAMH--PFTALFICILVVLVTAFVVFVERGQRKILVNYAKRQVGNKV 252
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---FW-QHVKEILNP 446
++P +N SG+ P + + ++ FP+ L GS +W + + L+P
Sbjct: 253 YGGQ-----SSHLPLKLNMSGVIPPIFASSIILFPATLGQWFGSSEGMYWLRDIASTLSP 307
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
+P +Y +YA + F F
Sbjct: 308 -----GQP-IYVMLYAVAIVFFCFF 326
>gi|56695420|ref|YP_165768.1| preprotein translocase subunit SecY [Ruegeria pomeroyi DSS-3]
gi|56677157|gb|AAV93823.1| preprotein translocase, SecY subunit [Ruegeria pomeroyi DSS-3]
Length = 455
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 13/281 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+++R R+ T L+++ R+G FIP+PG D R + Q G + + GA +
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGI--GGMVSMFTGGALGR 78
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q+L +VPSL QL+KEG G +KI Y ++ A ++A
Sbjct: 79 MGIFALGIMPYISASIIVQLLTAMVPSLEQLKKEGEQGRKKINQYTRLGTVALATVQAYG 138
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+A SL A + T LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLESGDLATEPGMYFRFATMITLVGGTMFLMWLGEQITARGIGNGVSLIIFVGIIA 197
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
L + + ++ + +L V ++T + V + RK+ +QY ++
Sbjct: 198 EVPAALAQFFASGRSGAISPAVIIAIILMVIAVIT-FVVFMERALRKIHIQYPRRQVGMK 256
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ ++P +NP+G+ P + + LL P +++
Sbjct: 257 VYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTIST 292
>gi|15676089|ref|NP_273220.1| preprotein translocase subunit SecY [Neisseria meningitidis MC58]
gi|121634036|ref|YP_974281.1| preprotein translocase subunit SecY [Neisseria meningitidis FAM18]
gi|161870898|ref|YP_001600075.1| preprotein translocase subunit SecY [Neisseria meningitidis 053442]
gi|218767148|ref|YP_002341660.1| preprotein translocase subunit SecY [Neisseria meningitidis Z2491]
gi|304388963|ref|ZP_07371010.1| preprotein translocase subunit SecY [Neisseria meningitidis ATCC
13091]
gi|385323311|ref|YP_005877750.1| preprotein translocase subunit SecY [Neisseria meningitidis 8013]
gi|385339205|ref|YP_005893077.1| preprotein translocase subunit SecY [Neisseria meningitidis G2136]
gi|385342797|ref|YP_005896668.1| preprotein translocase subunit SecY [Neisseria meningitidis
M01-240149]
gi|385852371|ref|YP_005898885.1| preprotein translocase subunit SecY [Neisseria meningitidis H44/76]
gi|385854341|ref|YP_005900854.1| preprotein translocase subunit SecY [Neisseria meningitidis
M01-240355]
gi|385856310|ref|YP_005902822.1| preprotein translocase subunit SecY [Neisseria meningitidis
NZ-05/33]
gi|416159253|ref|ZP_11605718.1| preprotein translocase, SecY subunit [Neisseria meningitidis N1568]
gi|416167757|ref|ZP_11607724.1| preprotein translocase, SecY subunit [Neisseria meningitidis
OX99.30304]
gi|416176342|ref|ZP_11609592.1| preprotein translocase, SecY subunit [Neisseria meningitidis M6190]
gi|416186108|ref|ZP_11613557.1| preprotein translocase, SecY subunit [Neisseria meningitidis M0579]
gi|416189994|ref|ZP_11615474.1| preprotein translocase, SecY subunit [Neisseria meningitidis
ES14902]
gi|416194743|ref|ZP_11617460.1| preprotein translocase, SecY subunit [Neisseria meningitidis CU385]
gi|416199861|ref|ZP_11619501.1| preprotein translocase, SecY subunit [Neisseria meningitidis
961-5945]
gi|416211562|ref|ZP_11621431.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240013]
gi|418289619|ref|ZP_12901884.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM220]
gi|421539357|ref|ZP_15985519.1| preprotein translocase, SecY subunit [Neisseria meningitidis 93004]
gi|421553911|ref|ZP_15999862.1| preprotein translocase, SecY subunit [Neisseria meningitidis 98008]
gi|421564490|ref|ZP_16010289.1| preprotein translocase, SecY subunit [Neisseria meningitidis
NM3081]
gi|421907633|ref|ZP_16337508.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha704]
gi|427826445|ref|ZP_18993496.1| preprotein translocase, SecY subunit [Neisseria meningitidis
H44/76]
gi|433464155|ref|ZP_20421649.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM422]
gi|433487360|ref|ZP_20444539.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13255]
gi|433489534|ref|ZP_20446673.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM418]
gi|433504210|ref|ZP_20461155.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9506]
gi|433506215|ref|ZP_20463134.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9757]
gi|433508475|ref|ZP_20465361.1| preprotein translocase, SecY subunit [Neisseria meningitidis 12888]
gi|433510432|ref|ZP_20467275.1| preprotein translocase, SecY subunit [Neisseria meningitidis 4119]
gi|433535763|ref|ZP_20492283.1| preprotein translocase, SecY subunit [Neisseria meningitidis 77221]
gi|7225380|gb|AAF40620.1| preprotein translocase SecY subunit [Neisseria meningitidis MC58]
gi|120865742|emb|CAM09471.1| preprotein translocase SecY subunit [Neisseria meningitidis FAM18]
gi|121051156|emb|CAM07427.1| preprotein translocase SECY subunit [Neisseria meningitidis Z2491]
gi|161596451|gb|ABX74111.1| preprotein translocase SECY subunit [Neisseria meningitidis 053442]
gi|254670759|emb|CBA07026.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha153]
gi|254672689|emb|CBA06579.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha275]
gi|261391698|emb|CAX49147.1| preprotein translocase SecY subunit [Neisseria meningitidis 8013]
gi|304337097|gb|EFM03284.1| preprotein translocase subunit SecY [Neisseria meningitidis ATCC
13091]
gi|316985688|gb|EFV64634.1| preprotein translocase, SecY subunit [Neisseria meningitidis
H44/76]
gi|325129081|gb|EGC51930.1| preprotein translocase, SecY subunit [Neisseria meningitidis N1568]
gi|325131052|gb|EGC53776.1| preprotein translocase, SecY subunit [Neisseria meningitidis
OX99.30304]
gi|325133074|gb|EGC55746.1| preprotein translocase, SecY subunit [Neisseria meningitidis M6190]
gi|325137220|gb|EGC59815.1| preprotein translocase, SecY subunit [Neisseria meningitidis M0579]
gi|325139052|gb|EGC61598.1| preprotein translocase, SecY subunit [Neisseria meningitidis
ES14902]
gi|325141175|gb|EGC63675.1| preprotein translocase, SecY subunit [Neisseria meningitidis CU385]
gi|325143252|gb|EGC65591.1| preprotein translocase, SecY subunit [Neisseria meningitidis
961-5945]
gi|325145359|gb|EGC67636.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240013]
gi|325197449|gb|ADY92905.1| preprotein translocase, SecY subunit [Neisseria meningitidis G2136]
gi|325199375|gb|ADY94830.1| preprotein translocase, SecY subunit [Neisseria meningitidis
H44/76]
gi|325203003|gb|ADY98457.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240149]
gi|325203282|gb|ADY98735.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240355]
gi|325207199|gb|ADZ02651.1| preprotein translocase, SecY subunit [Neisseria meningitidis
NZ-05/33]
gi|372203232|gb|EHP16940.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM220]
gi|393291302|emb|CCI73505.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha704]
gi|402321937|gb|EJU57408.1| preprotein translocase, SecY subunit [Neisseria meningitidis 93004]
gi|402333947|gb|EJU69242.1| preprotein translocase, SecY subunit [Neisseria meningitidis 98008]
gi|402346087|gb|EJU81191.1| preprotein translocase, SecY subunit [Neisseria meningitidis
NM3081]
gi|432205965|gb|ELK61980.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM422]
gi|432226125|gb|ELK81858.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13255]
gi|432230530|gb|ELK86205.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM418]
gi|432243593|gb|ELK99104.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9506]
gi|432244231|gb|ELK99726.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9757]
gi|432250126|gb|ELL05524.1| preprotein translocase, SecY subunit [Neisseria meningitidis 12888]
gi|432250500|gb|ELL05893.1| preprotein translocase, SecY subunit [Neisseria meningitidis 4119]
gi|432276774|gb|ELL31829.1| preprotein translocase, SecY subunit [Neisseria meningitidis 77221]
Length = 436
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|256831847|ref|YP_003160574.1| preprotein translocase subunit SecY [Jonesia denitrificans DSM
20603]
gi|256685378|gb|ACV08271.1| preprotein translocase, SecY subunit [Jonesia denitrificans DSM
20603]
Length = 429
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 18/296 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R +L T +IV+ RIG F+P PG I Q + +G++ L
Sbjct: 1 MLGGFVRAFRTPDLRYKLLFTIGIIVLYRIGSFVPAPGVSYPNIQQCLATQETGALLGLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIVQLLRVVIPRFEALHKEGQTGTAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYS-----LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+G A+L+A + +P + ++SV + + GA + W + I++ G
Sbjct: 121 IGLALLQATTYVTLARTGNLIPGCVVIPNNSVMTSLFVVLTMTAGATLLMWFGEQITDRG 180
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S++I + I + ++ ++Q G ++ +L V IV V V +
Sbjct: 181 IGNGMSMLIFISIAASFPPAIWS-ITQGSGGFAKFAI----VLAVALIVIALVVFVEQSQ 235
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R++ +QY + S YIP IN +G+ PV+ + +LA P+++A
Sbjct: 236 RRIPVQYAKRMVGRKVYGGS-----STYIPIKINMAGVIPVIFASSILAVPTLVAQ 286
>gi|402570856|ref|YP_006620199.1| protein translocase subunit SecY [Desulfosporosinus meridiei DSM
13257]
gi|402252053|gb|AFQ42328.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
meridiei DSM 13257]
Length = 428
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 30/330 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+++R+++ T ++ +I RIG IP+P F I +D F SGS+ D G+ +L
Sbjct: 13 ADLRKKIGYTLLMFLIFRIGAHIPIP-FVNHDILKDM--FGSGSMMNFMDTISGGSFKRL 69
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAV 268
+ F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y + ++LGF
Sbjct: 70 TVFALSITPYITASIILQLLTIVIPSLERLSKEGDYGRKKITQYTRYSTVALGF------ 123
Query: 269 IVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
+ + L Y I +A + ++ A +L G + W+ + I+E G G G SLI
Sbjct: 124 -IQAFGLTYGIRSALTIPSPAMQWPTYLLIALVLTAGTAFLMWVGEAITEKGIGNGISLI 182
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 382
I GI++ L + L + ++GLL + +T + V EG R+V +QY
Sbjct: 183 IFAGIVSRVPSALASLWEMLRVGEINALS-IIGLLIIVVFITAGVIYVQEGQRRVTVQY- 240
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHVK 441
A +IP +N +G+ PV+ LLAFP +AS S F + V
Sbjct: 241 ----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAMSLLAFPQTIASWTPTSGFARFVS 296
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S+ + P Y +Y + F F
Sbjct: 297 TWFSMNGSITSIP--YLLLYGALILFFTYF 324
>gi|145346074|ref|XP_001417520.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
gi|144577747|gb|ABO95813.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
Length = 423
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAE 207
FF ++ ++ L+V+SR+G +IP+ G DR + G + D G+
Sbjct: 4 FFGGKLPGKIATIFALLVLSRVGTYIPISGVDRAAFAESLAG--GGGMMAYADTLTGGSI 61
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILE 266
KL F LGI P I +SI+ Q+L + P L +L+K EG G K + Y + +LGFAI++
Sbjct: 62 SKLGIFSLGIVPYINSSIIFQLLGSVFPELKKLQKEEGEAGRRKFQQYQRYGALGFAIVQ 121
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV Y P + + + + L GAM + +I + ++E G G+SL+I
Sbjct: 122 AVGQCLYVRP---FVEDFTPIWLFEQSCALTAGAMILMYIGELLNEIKLGNGTSLLIFAN 178
Query: 327 ILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
I++ ++ + +S Q G S F G F + T+ V V E RK+ + Y
Sbjct: 179 IVSALPSSVGQTVSMAQEKGDSSVLAVF----FGAFALTTLGIVYVQEAERKIPMNY--- 231
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
+ R ++ Y+PF +N +G+ P++ + LLA P+ L + V L
Sbjct: 232 ----STRFNAGGLAKSSYLPFKVNSAGVMPIIFASSLLALPATLTRFTDNGAVLGVARFL 287
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIFDI 473
+P G P V + FF + + +
Sbjct: 288 SPGGGAGYVP-VNVAMICFFNYFYTFLQL 315
>gi|332523334|ref|ZP_08399586.1| preprotein translocase, SecY subunit [Streptococcus porcinus str.
Jelinkova 176]
gi|332314598|gb|EGJ27583.1| preprotein translocase, SecY subunit [Streptococcus porcinus str.
Jelinkova 176]
Length = 434
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 170/341 (49%), Gaps = 54/341 (15%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R+++ T +I+I RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRQKILYTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISLG A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLGLAFIQS 126
Query: 268 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A + SL ++ +VK ++ LL G++ ++W+ + I+ GFG G S+II
Sbjct: 127 IGITAGFNSLSNVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITAKGFGNGVSMIIFA 186
Query: 326 GILTGYTE---TLYK-MLSQLLGSSVRWWPFMLGLLGVFTI--VTMWAVVVTEGCRKVKL 379
GI++ T+Y+ + ++ ++G+L +F + + + V + K+ +
Sbjct: 187 GIISSIPNAIATVYEDYFVNVKAGDIQSSYLIVGVL-IFAVLAIVFFTTFVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY KL A S Y+P +NP+G+ PV+ + + PS L PF+Q+
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLI-----PFFQN 291
Query: 440 ---------VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+++ILN ++ G +YAF + LF+ F
Sbjct: 292 GRDIPWLTKLQDILNYQSPTG------MIVYAFLIILFSFF 326
>gi|408501549|ref|YP_006865468.1| transporter, probably The general secretory pathway (Sec)
[Bifidobacterium asteroides PRL2011]
gi|408466373|gb|AFU71902.1| transporter, probably The general secretory pathway (Sec)
[Bifidobacterium asteroides PRL2011]
Length = 442
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 161/336 (47%), Gaps = 24/336 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 203
++F E+R+++F +I+I RIG FIP PG D + + + +G+ D +G
Sbjct: 6 QAFRTKELRKKIFFVLGIIIIYRIGSFIPTPGVDYPAVQKCITT--AGNEDFIGLVNLFS 63
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 64 GGALLQLSIFALGIMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTEYTRYLTIGLA 123
Query: 264 ILEAVIVACYSLPYSIYAAS--------HSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
+L++ + + +++ + S ++ V ++ G + W+ + I++ G
Sbjct: 124 VLQSTTILVTANKGALFGGACQQQVIPDSSWWNMGVMVLIMTGGTGLIMWMAELITDKGI 183
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G S++I + I +G+ L+ + G W F + ++ V ++ + V R
Sbjct: 184 GNGMSVLIFISICSGFLPQLWNIGWGTNGKDGDWVKFGI-VVTVLLVILILVDYVELAQR 242
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY + S Y+P IN SG+ P + + +LA P+++A S
Sbjct: 243 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGNSD 297
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q+ + ++ + W Y +Y+ + F F
Sbjct: 298 --QNWVKWIDANMANTTSVW-YIVLYSVMIVFFCFF 330
>gi|320548035|ref|ZP_08042315.1| preprotein translocase subunit SecY [Streptococcus equinus ATCC
9812]
gi|320447277|gb|EFW88040.1| preprotein translocase subunit SecY [Streptococcus equinus ATCC
9812]
Length = 434
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 168/336 (50%), Gaps = 42/336 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I + R+G I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIIFVFRVGTHITVPGINAKSLDQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKTYILIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILT---GYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ T+Y+ + SS V + F+ L+ + + V + K+ +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLVSSYIFVALLIVAVLAIVFFTTFVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P INP+G+ PV+ + + PS + ++ + P
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNGHDIP 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++ LN +T +G IYA + LF+ F
Sbjct: 297 WLTTLESFLNYQTPIG------MVIYAVLIILFSFF 326
>gi|347534763|ref|YP_004841433.1| preprotein translocase subunit secY [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504819|gb|AEN99501.1| Preprotein translocase subunit secY [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 441
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 170/345 (49%), Gaps = 35/345 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ +F IR+++ T +++ I R+G +I +PG D + + Q+ S SG V+ L
Sbjct: 1 MLSTLKSAFGDKSIRKKILFTLLVLAIFRLGAYITVPGVDAKAL-QEVAS--SGLVNVLN 57
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ ++
Sbjct: 58 IFSGGGLTNYSIFAMGVSPYITAQIVVQLLQMDIVPKFVEWGKQGEVGRLKLDKVTRRLT 117
Query: 260 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A +++ I A ++ S++ + + +L G M +W+ D I++ G GQ
Sbjct: 118 IVLAFAQSIGITAGFNALSSLHLVENPGIATYASIGLILTAGTMLTTWMGDMITDKGIGQ 177
Query: 318 GSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWP--FMLGLLGVFTIVTMWAVVVT 371
G S+II GI+ TG+ E LY+ Q +S W P F++GL+ ++ + V
Sbjct: 178 GVSMIIFAGIVANIPTGF-EGLYRQYIQGTPTSDLWQPALFVVGLIIAMLVIVTFVTWVQ 236
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+ R++ +QY + A+ + + S Y+P +N +G+ PV+ + ++ P +
Sbjct: 237 QAERRIPIQYT--RRATGSAKSS-------YLPLKVNVAGVIPVIFASAFISTPQTILMF 287
Query: 432 L----GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GS W + + E+ N +T +GA T Y + +F F
Sbjct: 288 FTKNDGSKGWFKFMSELFNMQTPIGA------TFYTLLIVVFTFF 326
>gi|406035426|ref|ZP_11042790.1| preprotein translocase subunit SecY [Acinetobacter parvus DSM 16617
= CIP 108168]
Length = 452
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + Q F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAQ---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GVGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGIGNGISMIIFA 196
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGF 384
GI+ G + + S + + + L + G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAGLPNLVIQSFSSV--HNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY--- 251
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 --AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|407685271|ref|YP_006800445.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'English Channel 673']
gi|407701510|ref|YP_006826297.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Black Sea 11']
gi|407246882|gb|AFT76068.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'English Channel 673']
gi|407250657|gb|AFT79842.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Black Sea 11']
Length = 439
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 26/338 (7%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L++ A+S SE++ RL IV+ R+G ++P+PG D ++ D G++ E+ +
Sbjct: 6 LDSGAKSGL-SELKARLLFVLGAIVVFRLGSYVPIPGIDPAVL-ADLFEQQKGTIVEMFN 63
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S LGI P I ASI+MQ+L + P +V+L+KEG G KI Y +++L
Sbjct: 64 MFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMVELKKEGEAGRRKISQYTRYLTL 123
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
AI +++ ++ LP I + LV G M + W+ + I+E G G G
Sbjct: 124 VLAIFQSIGIST-GLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNG 182
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 377
S++I GI+ G + + Q + F+L L+GV I + VV E G R++
Sbjct: 183 ISILIFAGIVAGLPTAIGQTAEQARQGDINLL-FLL-LIGVIVIALTYLVVFVERGQRRI 240
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---S 434
+ Y A + ++P +N +G+ P + + ++ FP +A G S
Sbjct: 241 VVNY-----AKRQQGRQVFAAQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNES 295
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q V +L+P +P +Y +YA + F F
Sbjct: 296 TAWLQDVALMLSP-----GQP-LYVMLYAAAIIFFCFF 327
>gi|170718269|ref|YP_001785287.1| preprotein translocase subunit SecY [Haemophilus somnus 2336]
gi|168826398|gb|ACA31769.1| preprotein translocase, SecY subunit [Haemophilus somnus 2336]
Length = 441
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 25/328 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE++ RL FV LIV RIG FIP+PG D ++ Q L G++ ++ + GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQ-LLEQQKGTIIDMFNMFSGGALSR 74
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A ++A+
Sbjct: 75 ASIFALGIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATVQAIG 134
Query: 270 VACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
++ LP + + LV G M + W+ + I+E G G G SLII GI
Sbjct: 135 IST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGI 193
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ G + + + Q + +L + VF VT + V G R++K++Y A
Sbjct: 194 VAGLPSAIGQTIEQARQGQMHLLVLLLIAVIVFA-VTYFVVFFERGQRRIKVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N +G+ P + + ++ FP+ L S G + + +
Sbjct: 248 KRQQGRQIVGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTSWFGQGSNLEWLTELSLL 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P +P +Y +YA + F+ F
Sbjct: 308 LHP-----GQP-LYLIVYAVAIIFFSFF 329
>gi|443316468|ref|ZP_21045910.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
6406]
gi|442783901|gb|ELR93799.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
6406]
Length = 436
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 148/307 (48%), Gaps = 29/307 (9%)
Query: 175 FIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAELKLSFFQLGISPQIVASILMQ 228
FIP+PG DR Q + SGS+ F G L F LGI P I ASI+MQ
Sbjct: 43 FIPVPGIDRVAFGQ---AIESGSLGGFIGFIDIFVGGGLSALGIFALGILPFINASIIMQ 99
Query: 229 VLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVK 287
+L +P+L L+K EG G ++ +++ G+AIL++ +++ + L S +A +
Sbjct: 100 LLTAALPALEDLQKNEGEAGRRRVSQITRYVAFGWAILQSALLSIFLL--SPFAEQPGIF 157
Query: 288 HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSV 347
V+ T L G+M + W+ + I+E G G G+SL+I + I++ +L L G
Sbjct: 158 FVVQTVIALTAGSMFVMWVGEVITERGIGNGASLLIFINIVSTLPRSLSLTLELAKGEDS 217
Query: 348 RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEP--YIPF 405
R ++ LL VF + + V V EG R++ + SA R+ +E Y+P
Sbjct: 218 RVGGVII-LLLVFLAMIVGIVFVQEGTRRI-------PIISARRQVGRKLYLEQSNYLPL 269
Query: 406 NINPSGMQPVLTTTYLLAFPSILASILGSP-FWQHVKEILNPETSVGARPWVYYTIYAFF 464
+N G+ P++ + +L P L + +P F V LNP + WVY +Y
Sbjct: 270 RLNQGGVMPIIFASAVLVLPLSLTQYVSNPAFVGAVNTYLNPTS------WVYVLLYLVM 323
Query: 465 VFLFNIF 471
+ F+ F
Sbjct: 324 ILFFSYF 330
>gi|261380579|ref|ZP_05985152.1| preprotein translocase, SecY subunit [Neisseria subflava NJ9703]
gi|284796547|gb|EFC51894.1| preprotein translocase, SecY subunit [Neisseria subflava NJ9703]
Length = 437
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 11/284 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 14 GDLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I +SI++Q+ IVPSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 74 IFAIGIMPYISSSIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + S H+ T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 134 TFVYQQGVVVTSSLEFHIS-TVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGI 192
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 390
+ ++L+ S+ + ++G+ ++ +AVV E RKV + Y + S
Sbjct: 193 PSGIVRLLTLTEQGSMSMLMAVSIVIGILLLI--YAVVYFESAQRKVPVHYAKRQFGSGI 250
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
I ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 251 MPGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 289
>gi|313893111|ref|ZP_07826688.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
158 str. F0412]
gi|313442464|gb|EFR60879.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
158 str. F0412]
Length = 420
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 25/335 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA K S F + I+P I ASI+MQ+L +VP K+G DG +KI + +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ ++A +A ++L + ++ V V A +L G + WI + I+ G G G
Sbjct: 118 VVLGFVQAAGMA-FALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGI 176
Query: 320 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
SLII GI L ET+Y+ + G+ + F+ ++ + I + V VT+G R+
Sbjct: 177 SLIIFAGIVARLPDGLETIYQYIQN--GTINMFQAFLFAVIALAMIAVV--VAVTQGQRR 232
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A ++P +N +G+ P++ + +L FP +A + + F
Sbjct: 233 IPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEF 287
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V ++ T + +YA +F+F F
Sbjct: 288 VHKVADLFTWGTPLQT------ALYALLIFIFTYF 316
>gi|269798530|ref|YP_003312430.1| preprotein translocase subunit SecY [Veillonella parvula DSM 2008]
gi|269095159|gb|ACZ25150.1| preprotein translocase, SecY subunit [Veillonella parvula DSM 2008]
Length = 420
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 25/335 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA K S F + I+P I ASI+MQ+L +VP K+G DG +KI + +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ ++A +A ++L + ++ V V A +L G + WI + I+ G G G
Sbjct: 118 VVLGFVQAAGMA-FALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGI 176
Query: 320 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
SLII GI L ET+Y+ + G+ + F+ ++ + I + V VT+G R+
Sbjct: 177 SLIIFAGIVARLPDGLETIYQYIQN--GTINMFQAFLFAVIALAMIAVV--VAVTQGQRR 232
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A ++P +N +G+ P++ + +L FP +A + + F
Sbjct: 233 IPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEF 287
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V ++ T + +YA +F+F F
Sbjct: 288 VHKVADLFTWGTPLQT------ALYAILIFIFTYF 316
>gi|342733038|ref|YP_004771877.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456406|ref|YP_005669004.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417959320|ref|ZP_12602155.1| Preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-1]
gi|417965151|ref|ZP_12606742.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-4]
gi|417968137|ref|ZP_12609180.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-co]
gi|418015555|ref|ZP_12655120.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373291|ref|ZP_12965382.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342330493|dbj|BAK57135.1| preprotein translocase secY subunit [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505890|gb|EGX28184.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984752|dbj|BAK80428.1| preprotein translocase, SecY subunit [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380333691|gb|EIA24227.1| Preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-1]
gi|380338777|gb|EIA27635.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-4]
gi|380340243|gb|EIA28864.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-co]
gi|380341680|gb|EIA30154.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 424
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L NA F ++R+R+F T ++++ R+G FIP+PG + + Q + + G D +
Sbjct: 4 ILGNA---FKVKDLRKRIFFTLFIVIVFRLGNFIPVPGVNTESLKQLTSTGLFGFYDLIS 60
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA + S F LG+ P I +SI++Q+L +P QL KEG +G +K+++ ++S+
Sbjct: 61 G-GALERFSIFALGVVPYINSSIIVQLLSMSIPKFEQLSKEGEEGRKKLQNITRYLSIVL 119
Query: 263 AILEAVIVACYSLPYSIYA-ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+ ++A Y L + A ++S+ ++ F LV ++ + WI D +S G G G SL
Sbjct: 120 SFIQA--YGSYFLILNAGAITNNSIFSMIFVVFTLVAASVFLVWIGDQVSLHGIGNGVSL 177
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVK 378
I V I++ + ++ + V + F+L +G+ +W + +T R++
Sbjct: 178 FIFVNIVSRFPNMFLQIGALNKSGEVGFIESIIFILVAIGLL----IWTIYMTLAERRIT 233
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
+QY G +L+ + + + + +IPF+I S + ++ T +L FP+ + + W
Sbjct: 234 VQYAGKQLSGSNKNN------KAHIPFSITGSAVIAIIFATSVLQFPATIGTFFSPDSW 286
>gi|342217987|ref|ZP_08710619.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 135-E]
gi|341591753|gb|EGS34855.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 135-E]
Length = 420
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 21/295 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L N SE R+R T ++ ++ R+G IP+PG D +I F SG++ L
Sbjct: 1 MLENLQNVINVSEFRKRAIFTLIMFIVFRLGVHIPVPGVDSSVIEN---LFTSGNLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA K S + I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + +
Sbjct: 58 DLFSGGALSKFSILAMSITPYINASIIMQLLTSVVPTFEQWAKDNQDGRDKIQKVTRYGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ A+++A+ ++ Y+L + S V++ +L G + W+ D I+ G G G
Sbjct: 118 VALALIQALAMS-YALKVNNALVVDSWSTVIMVTLILTAGTCFLMWLGDQITAGGIGNGI 176
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SLII GI+ + + + S+ + +L ++ F ++ + V VT+G R+V +
Sbjct: 177 SLIIFAGIVARFPNGCATVYKYIQAGSINIFQAILFVIIAFFMIAI-VVEVTQGTRRVTV 235
Query: 380 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
QY G K+ +IP +N +G+ P++ + +L FP +A
Sbjct: 236 QYAKRIVGRKMYGGH---------STHIPLKVNQAGVIPLIFASSVLMFPVTIAQ 281
>gi|383789808|ref|YP_005474382.1| preprotein translocase subunit SecY [Spirochaeta africana DSM 8902]
gi|383106342|gb|AFG36675.1| preprotein translocase, SecY subunit [Spirochaeta africana DSM
8902]
Length = 440
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 161/333 (48%), Gaps = 28/333 (8%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG---SVDEL 201
N + F ++R RL T ++VI R+G IP+PG + + +++ +G S++
Sbjct: 4 NPLVDIFRIKDLRERLLFTFGMLVIFRLGTAIPIPGINVSALRAYFMAQRAGGGMSIEGY 63
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
DF GA S F LGI P I I+MQ++ + PSL ++ +E G ++I+ Y +
Sbjct: 64 LDFFSGGAFSNFSIFMLGIMPYISMQIIMQLMVIVFPSLKRISEEE-GGRKRIQKYTRYG 122
Query: 259 SLGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++ I+++ +V Y S+P +I + + + + G + + WI + I++ G G
Sbjct: 123 TVLVCIIQSFVVTVYADSIPNAI--TMNRTVYGLTAMLTVTVGTLFLMWIGEQITQRGIG 180
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCR 375
G SL+I GI+ +++++ + ++ P F+L + +F +V + G R
Sbjct: 181 NGISLLIFGGIVARMPAAVWQLIQAIRMDNLN--PVFVLVVFAMFIVVVGLVIYEQRGQR 238
Query: 376 KVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
K+ + Y G K+ A YIPF INPSG+ PV+ + +L FP +A
Sbjct: 239 KIPVHYAKRVVGRKMYGAQNT---------YIPFKINPSGVIPVIFASAILTFPLQIAQS 289
Query: 432 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFF 464
LG P W+ + N G V YT+ F
Sbjct: 290 LG-PNWRWIANFANWLNPTGTPYMVVYTLMIIF 321
>gi|160894735|ref|ZP_02075510.1| hypothetical protein CLOL250_02286 [Clostridium sp. L2-50]
gi|156863669|gb|EDO57100.1| preprotein translocase, SecY subunit [Clostridium sp. L2-50]
Length = 437
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 165/334 (49%), Gaps = 18/334 (5%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-SVDELGDF--G 205
+F E+R++L T ++++ R+G I +PG I ++YLS G S + F G
Sbjct: 7 NAFKVKELRQKLLYTFFVLIVVRLGSLITVPGIRADAI-KEYLSNALGDSFNLFSSFTGG 65
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ ++S F L ++P I ASI++Q+L +P+L +++K+G DG +KI + ++++G AIL
Sbjct: 66 SFDQMSIFALNVTPYITASIIIQLLTIAIPALEEMQKDGEDGRKKITAITRFLTIGLAIL 125
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
E+ +A + + S++ V+ +L G+ + W+ + +++ G G G S+I+ +
Sbjct: 126 ESAGLAI-NFGRKGFMDSYNFWTVLTMIVILTGGSAFVMWLGERVTDRGVGNGISIILLI 184
Query: 326 GILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
I++ + +Q + VR L ++ + VT+ ++ RK+ +QY
Sbjct: 185 NIVSTMPNDFKNIYTQFIKDKDPVRMCLIALLVVAIVVCVTILVCMLQGAERKIPVQY-- 242
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-SPFWQHVKE 442
A + + IP +N +G+ PV+ + L+A PSI+ S+ G SP K
Sbjct: 243 ---AKKVQGRKQMGGQSSNIPLKVNTAGVIPVIFASSLMAIPSIITSLFGKSPSGVGAKI 299
Query: 443 ILNPETSV---GARPWVY--YTIYAFFVFLFNIF 471
+ S PW + +Y VF F F
Sbjct: 300 LQGMSQSYWFNANYPWGFLGLAVYILLVFFFAYF 333
>gi|365873465|ref|ZP_09412998.1| preprotein translocase, SecY subunit [Thermanaerovibrio velox DSM
12556]
gi|363983552|gb|EHM09759.1| preprotein translocase, SecY subunit [Thermanaerovibrio velox DSM
12556]
Length = 431
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 159/327 (48%), Gaps = 22/327 (6%)
Query: 149 ESFFKSEIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
++F +++ R LFV A L V R+G IP PG D + + F G V D
Sbjct: 7 DAFRLPDLKNRFLFVLAALFV-YRLGAHIPTPGIDPEAMAR---LFERGGVLGFLDLFAG 62
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA + S F LG+ P I +SI+MQ+L +VPSL +++KEG DG +KI Y + ++ FA+
Sbjct: 63 GALSRFSIFALGVVPYINSSIVMQLLTVVVPSLEKMQKEGEDGRKKITQYTRYGTVIFAL 122
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++++ + + ++ + V+ A + G++ + W+ + +S+ G G G S++I
Sbjct: 123 VQSIGMVSWLRGLGVFYGGF-LDGVLAVA-TVTTGSLAVMWLGEVMSDHGIGNGISMLIF 180
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ + + + + + +L L+ + V V++ EG RK+ +QY
Sbjct: 181 AGIVARIPGAIAQTFTMVRMGEMNILVVLLALV-IMVAVVAGCVMLQEGQRKLPVQY--- 236
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
A + YIP +N +G+ P++ + +L FP +A P + V+ I
Sbjct: 237 --AKRVVGNRVYGGQSTYIPLRVNTAGVIPIIFASSVLLFPYTIARFFSGPVAEAVQRIF 294
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P + VY +Y + F+ F
Sbjct: 295 SPGSV------VYMILYVALIVFFSFF 315
>gi|313667461|ref|YP_004047745.1| preprotein translocase subunit SecY [Neisseria lactamica 020-06]
gi|313004923|emb|CBN86349.1| preprotein translocase SecY subunit [Neisseria lactamica 020-06]
Length = 436
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 16/286 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++RL +V+ RIG IP+PG D + + Y S G + L F G+ + S
Sbjct: 14 GDLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGGGILGILNMFSGGSLERFS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA
Sbjct: 74 IFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKLITKYTRYGTVLLAILQSLGVA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ I S S + + T LV G M + W+ + I+E G G G SLII GI +G
Sbjct: 134 SFVFQRGIVVTS-SFEFYVSTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGI 192
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQYYGFKLASA 389
+ ++++ + ++ ++ LL VF ++ + +VV RK+ + Y A
Sbjct: 193 PSGITRLVAFVNQGTM---SILMALLIVFGVLLLIYLVVYFESAQRKIPIHY-------A 242
Query: 390 ARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+ +S + ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 243 KRQFNSGLGNHNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|237804861|ref|YP_002889015.1| preprotein translocase subunit SecY [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231273161|emb|CAX10074.1| protein translocase subunit [Chlamydia trachomatis B/TZ1A828/OT]
Length = 457
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 174/345 (50%), Gaps = 37/345 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILACFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ + L S + + + +L+P + V Y+I+ + +F
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIF 338
>gi|94968274|ref|YP_590322.1| protein translocase subunit secY/sec61 alpha [Candidatus Koribacter
versatilis Ellin345]
gi|94550324|gb|ABF40248.1| protein translocase subunit secY/sec61 alpha [Candidatus Koribacter
versatilis Ellin345]
Length = 463
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 163/339 (48%), Gaps = 19/339 (5%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--G 205
A F ++R+R+F T L+ + RIG IP PG + ++ Q + GSV D G
Sbjct: 6 ANIFRIPDLRKRVFFTLALLAVYRIGGHIPTPGVNADML-QQFFQNNRGSVLGFVDLFSG 64
Query: 206 AELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
+L+ L+ F LGI P I ASI++Q+L + L +L+KEG G +KI + +++ G +
Sbjct: 65 GQLRRLTIFALGIMPYITASIILQLLTVVYEPLAKLQKEGELGRKKITQWTRYLTFGLSA 124
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+++ +A + +++T L G++ + W+ + I+E G G G SL+I
Sbjct: 125 MQSFGIAVTLTKQPGMVLNPGWGFILMTMLTLTTGSVFIMWLGEQITERGIGNGMSLLIF 184
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
GI+ G + ++ ++ + W PF ML L+ V ++ + V V R++ +Q
Sbjct: 185 AGIVVGLPRGVADLVDKI--KTQYWGPFTVPAMLLLILVMFLIVAFIVYVERSERRITVQ 242
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y A + ++P +N G+ PV+ + +L P + +LGS H
Sbjct: 243 Y-----AKRIVGRKMMGGTSTFLPLRVNSGGVMPVIFASSILTLPQTVG-MLGSVSKYHW 296
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYT 479
+ L + G +Y +YA + F F VSI++
Sbjct: 297 VKNLMDQLKWGEP--LYTMLYALGIVFFAYF-YVSIVFN 332
>gi|416181265|ref|ZP_11611561.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13399]
gi|325135168|gb|EGC57794.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13399]
Length = 436
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 13/293 (4%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 381
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K R S T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 288
>gi|116072182|ref|ZP_01469450.1| preprotein translocase SecY [Synechococcus sp. BL107]
gi|116065805|gb|EAU71563.1| preprotein translocase SecY [Synechococcus sp. BL107]
Length = 439
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 18/300 (6%)
Query: 175 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 232
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 233 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 291
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYAVEGLSEVV-FVVQ 160
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRW 349
TA LV G+M + WI + I+E G GQG+SL+I + I+ TL + +Q
Sbjct: 161 TALALVTGSMVVMWIAEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 350 WPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINP 409
+L L+ + TIV + + V EG R++ + ++ A + + Y+P +N
Sbjct: 221 GIVVLVLVFLATIVGI--IFVQEGARRIPIVSAKRQVGGAG----ALPTRQSYLPLKLNA 274
Query: 410 SGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN 469
G+ P++ + L+ P +A++ S + +LNP S PW Y AFF +
Sbjct: 275 GGVMPIIFASALIFLPVTVANLTKSEWLIRAASMLNPSAS---NPWPYA--LAFFTLILG 329
>gi|379009443|ref|YP_005267256.1| preprotein translocase membrane subunit [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|375157967|gb|AFA41033.1| preprotein translocase membrane subunit [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 449
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 156/314 (49%), Gaps = 24/314 (7%)
Query: 132 NRFLNFIRLS--SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 189
N LN+ + S ++ N F E++ RL ++I RIG FIP+PG D ++ +
Sbjct: 2 NNLLNYKKKSQFNIKKNKNNLF---ELKNRLIFVIFALIIFRIGSFIPIPGIDTNIL-SN 57
Query: 190 YLSFVSGSVDELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD 246
+ G++ EL + GA + S F LGI P I ASI++Q+L I P L +++K+G
Sbjct: 58 LIEQQKGTIIELFNMFSGGALSRASIFALGIMPHISASIIIQLLTIIHPKLSEIKKDGEF 117
Query: 247 GHEKIKSYIWWISLGFAILEAVIVACYSLP----YSIYAASHSVKHVMVTAFLLVCGAMT 302
G KI Y + +L AI++++ +A LP ++ + T LV G +
Sbjct: 118 GRRKINEYTRYSTLILAIIQSMSIAI-GLPNMPGMQELVIQKGLEFYITTITSLVSGTIF 176
Query: 303 MSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI 362
+ W+ + I+ G G G SL+I GI+ G + + + + ++ ++ + +F I
Sbjct: 177 LMWLGEQITSRGIGNGISLLIFSGIVAGLPIDIIQSIEKARQGDLKILTILVSMTLIF-I 235
Query: 363 VTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTY 420
+T + V + G RK+ + Y + R+ + IT ++P IN SG+ P + +
Sbjct: 236 ITFFVVFIERGQRKITVNY---AMRQKGRKIYAAHIT----HLPLKINMSGVIPAIFASS 288
Query: 421 LLAFPSILASILGS 434
L+ FP+ +AS G
Sbjct: 289 LILFPATIASWFGG 302
>gi|19551791|ref|NP_599793.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|62389446|ref|YP_224848.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|145294720|ref|YP_001137541.1| preprotein translocase subunit SecY [Corynebacterium glutamicum R]
gi|417969778|ref|ZP_12610714.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
S9114]
gi|418244734|ref|ZP_12871148.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 14067]
gi|585986|sp|P38376.1|SECY_CORGL RecName: Full=Protein translocase subunit SecY
gi|13310194|gb|AAK18191.1|AF331925_2 SecY [Corynebacterium glutamicum]
gi|699588|dbj|BAA03207.1| SecY protein [[Brevibacterium] flavum]
gi|21323320|dbj|BAB97948.1| Preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|41324780|emb|CAF19262.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|140844640|dbj|BAF53639.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045882|gb|EGV41551.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
S9114]
gi|354511243|gb|EHE84158.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 14067]
Length = 440
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 42/346 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 262 FAILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ + + P + W Y +Y F+ F
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYF 332
>gi|312866537|ref|ZP_07726754.1| preprotein translocase, SecY subunit [Streptococcus downei F0415]
gi|311097968|gb|EFQ56195.1| preprotein translocase, SecY subunit [Streptococcus downei F0415]
Length = 434
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 43/343 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+ +R+++F T I++ RIG I +PG + + + L+ +SGS +
Sbjct: 8 EALRLKNVRKKIFFTIFAILVFRIGAHITVPGVNATALENMKDLPFLNMLNLISGSA--M 65
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G F S F LG+SP I ASI++Q+L I P V+ K+G G K+ +ISL
Sbjct: 66 GSF------SIFALGVSPYITASIVVQLLQMDIYPRFVEWSKQGEVGRRKLNQATRYISL 119
Query: 261 GFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ I A ++ L S AS S K + +L G + ++W+ D I++ GFG G
Sbjct: 120 VLAFIQSISITAGFNILASSKLLASPSPKTFITVGLILTTGTVIVTWLGDQITDKGFGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ + + ++ G W ++ L+ ++ + V +
Sbjct: 180 VSMIIFAGIIAQIPNAVKSIYNEYFVNIAPGQLTNSWIYIGLLVFAVLVIIFFTTFVQQA 239
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ +QY KLA A S Y+P +NP+G+ PV+ + + A PS + + L
Sbjct: 240 EYQIPIQYT--KLAQGAPTSS-------YLPLKVNPAGVIPVIFASSITAAPSSIITFLQ 290
Query: 434 S-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S P+ ++E+ + ++ G IYA + LF+ F
Sbjct: 291 STNVNLPWLDTLQELFSYQSPTG------MAIYAVLIALFSFF 327
>gi|448823023|ref|YP_007416188.1| preprotein translocase SecY subunit [Corynebacterium urealyticum
DSM 7111]
gi|448276520|gb|AGE35944.1| preprotein translocase SecY subunit [Corynebacterium urealyticum
DSM 7111]
Length = 471
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 41/352 (11%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDFG 205
+F ++R+++ T +I++ RIG IP PG D I + S + L G
Sbjct: 34 AFKNVDLRKKILFTLAMIILYRIGSQIPTPGVDYANITKQISELTESSAVYSLINLFSGG 93
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L
Sbjct: 94 ALLQLSIFAIGIMPYITASIIVQLLTVVIPKFEQLKKEGQTGQAKMTEYTRYLTVALALL 153
Query: 266 E-AVIVACYS----LPYSIYAASHSVK--HVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+ A IVA L I V ++V ++ GA+ + W+ + I++ G G G
Sbjct: 154 QSAGIVALADREQLLGQGIPVLKDEVGIFGLIVMVLIMTSGAVLVMWLGELITDRGVGNG 213
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I GI T +LS + + GLL ++ + V V +G R++
Sbjct: 214 MSLLIMAGIATTLPGEGVSILSN--SGGFIFGAVVFGLL----LLIVGVVFVEQGQRRIP 267
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--- 435
+QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ S
Sbjct: 268 VQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGAAA 322
Query: 436 -------FW-QHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+W ++V +L NP W Y +Y + F+ F VS+ Y
Sbjct: 323 GEDVANNWWNRNVMTVLQNPAA------WQYILVYLALIIFFSFF-YVSVQY 367
>gi|255530534|ref|YP_003090906.1| preprotein translocase subunit SecY [Pedobacter heparinus DSM 2366]
gi|255343518|gb|ACU02844.1| preprotein translocase, SecY subunit [Pedobacter heparinus DSM
2366]
Length = 444
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 8/277 (2%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
E++ R+ T +++++ R + LPG D L+ + S + G +D G+ ++S
Sbjct: 15 QELKERIIFTLMILLVYRFVSHVVLPGVDATLLGDNTKSGILGLLDMFAG-GSFSRVSIL 73
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
LG+ P I ASI++Q+L VPS +++KEG G +K+ ++++ ++AV
Sbjct: 74 ALGVMPYISASIVVQLLGIAVPSFQKMQKEGESGRKKLNQITRYLTVAITAVQAVGYVKT 133
Query: 274 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
+P H++ V+ T F+L G + + W+ + I++ G G G SLII VGI+
Sbjct: 134 QVPAEAIIIDHTLFFVLAT-FVLSAGTLFVMWLGEKITDKGIGNGISLIIMVGIIARLPI 192
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
L + +S ++ ++ +F +V M+ +++ +G RKV +QY A +
Sbjct: 193 ALQQEISSRFVGDGGLIALVVEIVALFAVV-MFTIMIVQGVRKVPVQY-----AKRIVGN 246
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
V YIP +N +G+ P++ L+ P+ L
Sbjct: 247 RQFGGVRQYIPLKVNAAGVMPIIFAQALMFIPATLTG 283
>gi|119502944|ref|ZP_01625029.1| protein translocase subunit SecY [marine gamma proteobacterium
HTCC2080]
gi|119461290|gb|EAW42380.1| protein translocase subunit SecY [marine gamma proteobacterium
HTCC2080]
Length = 434
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 21/297 (7%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV---SGSVDE 200
+NNA E+ RL V ++I RIG IP+PG D P+ + G++
Sbjct: 1 MNNAG----MGELFARLRFVLVALIIYRIGTHIPVPGID----PEQLAALFDQNQGTILG 52
Query: 201 LGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
L + GA ++S LGI P I ASI+M ++ + P L Q++KEG G KI Y +
Sbjct: 53 LANVFSGGALERMSILALGILPYISASIIMNLMSAVSPQLEQIKKEGEAGRRKISQYTRY 112
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+++ A+++A + L A SV ++ LV GA+ M W+ + I+E G G
Sbjct: 113 LTVALALVQATGMTV-GLANQGLAFDTSVSFYVIAITSLVTGAVFMMWLGEQITERGIGN 171
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G SL+I GI G + + L Q + +L ++ + IV V + G R+V
Sbjct: 172 GISLLIFAGIAAGLPSAVGQSLEQARQGELNIL-VLLAIVALAVIVIYLVVFIERGQRRV 230
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ Y A + ++P +N SG+ P + + +L FP+ LA GS
Sbjct: 231 TVNY-----AKRQQGRQSYQAQSSHLPLKVNMSGVIPAIFASSILLFPASLAQWFGS 282
>gi|114778804|ref|ZP_01453611.1| SecY protein [Mariprofundus ferrooxydans PV-1]
gi|114550935|gb|EAU53499.1| SecY protein [Mariprofundus ferrooxydans PV-1]
Length = 446
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 32/336 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E++ R+ T ++++ RIG IP+PG D ++ Q + S GS+ + D GA +L+
Sbjct: 20 ELKSRILFTLGMLIVYRIGAHIPVPGIDAGVLAQ-FFSQAKGSLLGMFDMFSGGALSRLT 78
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I A+I++Q++ + P L QL+KEG G KI Y + ++G AI +A+ ++
Sbjct: 79 IFALGIMPYISAAIIIQLMTVVSPKLEQLKKEGESGRRKITEYTRYGTVGLAIFQAIGIS 138
Query: 272 CYSLPYSIYAASHSVKHVM----VTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+S+ S + M +T LV G + + W+ + ++E G G G SLII GI
Sbjct: 139 IGLESFSVGGQSVVIDPGMAFRAMTVITLVTGTIFLMWVGEQVTERGIGNGISLIIFGGI 198
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ G + L L + + F +LGL + VT V R++ +QY ++
Sbjct: 199 VAGLPHAVGSTLE--LARTGEFSAFTVLGLFAMSLAVTGAVVWFERAQRRIPIQYAKRQV 256
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----SILGSPFWQHVKE 442
+ ++P +N +G+ P + + L+ P+ A + G + +
Sbjct: 257 GNRMYGGK-----ASFLPLKVNTAGVIPPIFASSLILLPATFAQFTKGVDGFAWLGDLSA 311
Query: 443 ILNPETSVGARPWVYYTIYA----FFVFLFN--IFD 472
L+P W+Y ++ FF F + +FD
Sbjct: 312 ALSPGA------WLYMALFTGLIVFFCFFYTAIVFD 341
>gi|89898702|ref|YP_515812.1| preprotein translocase subunit SecY [Chlamydophila felis Fe/C-56]
gi|89332074|dbj|BAE81667.1| preprotein translocase SecY chain [Chlamydophila felis Fe/C-56]
Length = 457
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 167/348 (47%), Gaps = 36/348 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ R+G FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 263 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A + S+P + S K M T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGGPWIFYMTTVIVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCFIFVFVLV 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILG--SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + S + + + +L+P WVY Y + F F
Sbjct: 301 ATIGQFMSSDSSWLKRIAMMLSPGG------WVYSLCYVLLIIFFTYF 342
>gi|333918167|ref|YP_004491748.1| Preprotein translocase subunit secY [Amycolicicoccus subflavus
DQS3-9A1]
gi|333480388|gb|AEF38948.1| Preprotein translocase subunit secY [Amycolicicoccus subflavus
DQS3-9A1]
Length = 437
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 159/344 (46%), Gaps = 37/344 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 208
++RR++ T ++V+ R+G IP PG D + + Q +G S+ L GA L
Sbjct: 13 DLRRKILFTLGIVVLYRLGAQIPSPGVDFANIQSCVAQATGGDAAGLYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +G+ P I ASI++Q+L ++P QLRKEG G K+ Y ++++ A+L+A
Sbjct: 73 QLSVFAIGVIPYITASIIVQLLTVVIPKFEQLRKEGQSGQAKMTQYTRYLAVALAMLQAT 132
Query: 269 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
IVA + + A SV ++V ++ GA + W + ++E G G G SL
Sbjct: 133 GIVALAARGQLLQGCELDIIADTSVFGLLVIVLVMTAGATLLMWFGEQVTERGVGNGMSL 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI +L G + F L + IVT V V +G R++ +QY
Sbjct: 193 LIFAGIAAMIPVEGNNILQSRGGVT-----FTLVCIAAAAIVT-GVVFVEQGQRRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFW 437
A Y+P +N +G+ PV+ + LL P ++ + P W
Sbjct: 247 -----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLLYMPFLVVQLTTGQEEPPAW 301
Query: 438 QH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYT 479
Q + ++NP + V Y I F + +F F VSI +
Sbjct: 302 QRFMTEHLMNPSSPV-------YIILYFMLIMFFTFFYVSITFN 338
>gi|429744128|ref|ZP_19277639.1| preprotein translocase, SecY subunit [Neisseria sp. oral taxon 020
str. F0370]
gi|429163628|gb|EKY05835.1| preprotein translocase, SecY subunit [Neisseria sp. oral taxon 020
str. F0370]
Length = 426
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 142/289 (49%), Gaps = 17/289 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
FKS E++ RL +++ RIG IP+PG + + + Y +G + L F G+
Sbjct: 9 KLFKSIELKNRLLFLLAALIVFRIGAHIPVPGVNTSALAEVYKDQGNGILGMLNVFSGGS 68
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+ S F +GI P I ASI++Q+ I+PSL L+KEG G +I Y + ++ A+ +
Sbjct: 69 LERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGDLGRRQITRYTRFAAVILALFQ 128
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ A + + S V+ ++T LV G M + W+ + I+E G G G SLII G
Sbjct: 129 GAVAATFVFQQGVVVISQ-VEFYLLTLICLVTGTMFLMWLGEQITERGIGNGISLIITAG 187
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFK 385
I G L ++ S ++ + F+L I+ ++ VV E RKV + Y
Sbjct: 188 ICAGIPSGLSQLWSMIVSGKLLSVLFIL----FAAILLIYIVVFFESALRKVPIHY---- 239
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
AR Y+PF +N +G+ P + + ++ FP+ + + LG+
Sbjct: 240 ----ARRQILDGGKGAYLPFKLNMAGVIPPIFASSVILFPATIVNWLGN 284
>gi|317125852|ref|YP_004099964.1| protein translocase subunit secY/sec61 alpha [Intrasporangium
calvum DSM 43043]
gi|315589940|gb|ADU49237.1| protein translocase subunit secY/sec61 alpha [Intrasporangium
calvum DSM 43043]
Length = 440
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 161/348 (46%), Gaps = 44/348 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 204
+F ++R +L T +IV+ R+G +P PG L+ Q+ L+ S D F
Sbjct: 7 RAFRTPDLRNKLLFTLSIIVLFRLGSHLPTPGVSYPLV-QNCLASRDASGDAASGFLNLA 65
Query: 205 -----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
GA L+LS F LGI P I ASI++Q+L ++P +L+KEG G K+ Y +++
Sbjct: 66 NLFSGGALLQLSVFALGIMPYITASIIVQLLTVVIPRFEELKKEGQAGTTKMTQYTRYLT 125
Query: 260 LGFAILEAVIVACYSL-PYSIYAAS-------HSVKHVMVTAFLLVCGAMTMSWICDTIS 311
+G A+L++ + ++ P +++ + S +++ + G + W+ + I+
Sbjct: 126 IGLAVLQSSTLVTFARNPSTLFGPACDNILVDSSFVTILIMVLTMTAGTGLIMWLGELIT 185
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVV 369
+ G G G SL+I + I + + L+ + + W LG LLG+F I + V
Sbjct: 186 DRGVGNGMSLLIFLSIASSFPRALWAIKDN------QGWGTFLGVILLGLFVIAAV--VF 237
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + R++ +QY + + YIP +N + + PV+ L+A P ++A
Sbjct: 238 VEQSQRRIPVQYAKRMVGRRMYGGT-----STYIPLKVNMANVIPVIFAASLMALPGMIA 292
Query: 430 SI-----LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P W Q V+ L + G P VY IY + F F
Sbjct: 293 QFNTDPTQTPPLWVQWVQTNL----TKGDHP-VYMIIYTALIIFFTFF 335
>gi|440696631|ref|ZP_20879086.1| preprotein translocase, SecY subunit [Streptomyces turgidiscabies
Car8]
gi|440281139|gb|ELP68800.1| preprotein translocase, SecY subunit [Streptomyces turgidiscabies
Car8]
Length = 438
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 163/339 (48%), Gaps = 28/339 (8%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 202
A +F ++R++L T +IV+ R+G IP+PG D + + +GS G
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYQNVQTCIDVAKNGSQGLFGLVNMF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 66 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVAL 125
Query: 263 AILEAVIVACYSLPYSIYA----ASHSV--KHVMVTAFLLV---CGAMTMSWICDTISES 313
AIL+ + + ++++ AS V + + VT +++ G + W+ + I++
Sbjct: 126 AILQGTGLVATARSGALFSGCTVASEIVPDQSIFVTVTMVITMTAGTAMVMWLGELITDR 185
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S+++ + I + L+ + +Q G W ++ V ++ V V +
Sbjct: 186 GIGNGMSILMFISIAATFPSALWAIKTQ--GDLAGGWIEFGTVIAVGLVMVALVVFVEQA 243
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 432
R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 244 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVAQFSG 298
Query: 433 GSPFWQHVKEILNPETSVGARP---WVYYTIYAFFVFLF 468
G+ W K + + G P Y+T+ FF F +
Sbjct: 299 GTSGW---KTWIEQNLTKGDHPIYIATYFTLIVFFAFFY 334
>gi|385142714|emb|CCH23753.1| preprotein translocase SecY [Corynebacterium glutamicum K051]
Length = 440
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 42/346 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 262 FAILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ + + P + W Y +Y F+ F
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYF 332
>gi|169830456|ref|YP_001716438.1| preprotein translocase subunit SecY [Candidatus Desulforudis
audaxviator MP104C]
gi|169637300|gb|ACA58806.1| preprotein translocase, SecY subunit [Candidatus Desulforudis
audaxviator MP104C]
Length = 424
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
+E+R +L T +++I RIG +P PG + + S V ++ GA S F
Sbjct: 14 TELRNKLLFTLAMLLIFRIGAHVPTPGVRPEAMAELIASGVLFGFFDVISGGAFKNFSVF 73
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
+GI P I ASI+MQ+L ++P L +L KEG +G +KI+ YI + + A L+A+
Sbjct: 74 AMGIIPYINASIIMQLLTVVIPKLERLAKEGEEGRKKIQQYIRYGTAVLAFLQAI----- 128
Query: 274 SLPYSIYAA--SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ +I A S +V + + A +L G + + W+ + I+E G G G SL+I GI++
Sbjct: 129 GMSVAIKGALISPTVVNYLFVALILTAGTVFLMWLGEQITEKGIGNGISLLIFAGIVSRV 188
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
E + +++ L ++ +L LL + T+V V + EG R++ +QY K R
Sbjct: 189 PEGVTRVVEYLQVGTINILS-VLALLIIGTLVIAAVVAMHEGQRRIPVQYA--KRVIGRR 245
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
T ++P +N +G+ PV+ + +L FP
Sbjct: 246 VYGGQTT---HLPLKVNQAGVIPVIFASSMLIFPE 277
>gi|390954658|ref|YP_006418416.1| protein translocase subunit secY/sec61 alpha [Aequorivita
sublithincola DSM 14238]
gi|390420644|gb|AFL81401.1| protein translocase subunit secY/sec61 alpha [Aequorivita
sublithincola DSM 14238]
Length = 447
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 26/337 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R R+ +T ++++ R G + LPG D ++ Q F +G + L + GA S
Sbjct: 15 ELRNRILLTLGMLLVYRFGAQVVLPGIDADMLAQFAGQFNAGGIGGLLNAFTGGAFANAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---- 267
F LGI P I ASI++Q++ VP L +L+KEG G +KI W+++G +++A
Sbjct: 75 VFALGIMPYISASIVVQLMQIAVPYLQKLQKEGESGRKKINQITRWLTIGICLVQAPSYL 134
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ +P + S + +LV G + W+ + I++ G G G S++I VGI
Sbjct: 135 AGLPAMGVPAEAFIMGQSFMFYFSSVIILVTGTIFAMWLGEKITDKGIGNGISILIMVGI 194
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ ++ + + S +L L ++ ++ + ++++ RK+ +Q Y + A
Sbjct: 195 IARLPQSFAQEFVSRVMESNGGLIMILIELVIWFVIILLSIMLVMAVRKIPVQ-YARRTA 253
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
S E + I +IP +N SG+ P++ ++ PS +AS+ S Q ++
Sbjct: 254 SGGYEKN-IFGARQFIPLKLNASGVMPIIFAQAIMFVPSAVASLSDSDMAQGIQA----- 307
Query: 448 TSVGARPWVYYTIYAFFVFLFN-IFDIVSILYTLLFT 483
T F F +N +F ++ I++T +T
Sbjct: 308 -----------TFSDIFGFWYNLVFAVLIIIFTYFYT 333
>gi|323141376|ref|ZP_08076267.1| preprotein translocase, SecY subunit [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414125|gb|EFY04953.1| preprotein translocase, SecY subunit [Phascolarctobacterium
succinatutens YIT 12067]
Length = 418
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 152/301 (50%), Gaps = 15/301 (4%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A F +E+R+++ T + ++ R G IP+PG + +I Q F SG++ L D
Sbjct: 6 ANIFRITELRQKVLFTLAMFIVFRAGTHIPVPGVNASVIEQ---LFRSGNLFGLLDMFSG 62
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA K S F + I+P I ASI++Q+L +VP+L Q KEG +G +K +++ A
Sbjct: 63 GALSKFSIFAMSITPYINASIILQLLKVVVPTLEQWSKEGEEGFKKTTKLTRMLTVALAF 122
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++A +A Y L +I + + +++ A L G + + WI + I+ G G G SLII
Sbjct: 123 VQACGMA-YGLKMAI--NNPGIFSILLIAITLTAGTVFLMWIGEQITARGVGNGISLIIF 179
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI++ + L + L +V +L + + ++ ++++EG RK+ +QY
Sbjct: 180 AGIVSRLPDGLKVIFQYLQAGTVSLLNVIL-FAAIALAMVVFVIIISEGIRKIPVQYAKR 238
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
+ A YIP +N +G+ P++ + +L FP +A + P+ + + ++
Sbjct: 239 VVGKKAYGGH-----TSYIPLKVNQAGVIPIIFASSVLMFPVTIAQFVDVPWVKAMGKLF 293
Query: 445 N 445
Sbjct: 294 Q 294
>gi|298491416|ref|YP_003721593.1| preprotein translocase subunit SecY ['Nostoc azollae' 0708]
gi|298233334|gb|ADI64470.1| preprotein translocase, SecY subunit ['Nostoc azollae' 0708]
Length = 437
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 33/340 (9%)
Query: 147 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
A E+F + + +R RL VT ++++ R+G F+P+PG +R + + +SG+ G
Sbjct: 10 AQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----ERFAEAISGNNSIFG 65
Query: 203 DF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
G L L F LGI P I ASI++Q+L +PSL L+K EG G +I
Sbjct: 66 LLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRQISQITR 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++++ +AI+++V A +L +A + V TA L G+M + W + I+E G G
Sbjct: 126 YVTVAWAIIQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIG 183
Query: 317 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I V I+ ++L L Q+ G + +L L+ + TI+ + V V EG
Sbjct: 184 NGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIIGI--VFVQEGM 241
Query: 375 RKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 242 RRI-------PIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLVANFT 294
Query: 433 -GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V L+P G+ WVY +Y + F+ F
Sbjct: 295 KNADLANIVNTYLSPS---GSGSWVYALVYMISIVFFSYF 331
>gi|119953287|ref|YP_945496.1| preprotein translocase subunit SecY [Borrelia turicatae 91E135]
gi|119862058|gb|AAX17826.1| protein translocase subunit SecY [Borrelia turicatae 91E135]
Length = 434
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 145/287 (50%), Gaps = 19/287 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
++R + T ++ I R+G ++P+PG D + + S S+ DF GA S
Sbjct: 13 DLRSKFLFTLFILFIFRVGSYLPIPGIDPVALRSYFKSQSDFSITNYFDFFSGGAFSNFS 72
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F L I P I ASI++Q+L + PSL ++ +EG +G +KIK Y ++++ A+ + +
Sbjct: 73 IFMLSIGPYISASIIIQLLVYSFPSLKKM-QEGDNGRKKIKKYTKYLTIVAAVAQGYATS 131
Query: 272 CY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
Y S+P ++ + +++ + + G + W+ + I++ G G G SLII GI+
Sbjct: 132 LYAKSIPGALNMPFY--RYIFIAILTVTTGTFVLLWLGEQINQRGIGNGVSLIIFSGIVV 189
Query: 330 GYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
L+ + + S P F++ +L VF +V + + + R++ + Y
Sbjct: 190 RLQAALFNLFQSMRDPSQNINPVFVILVLSVFILVVILIIYEYKAQRRITIHY------- 242
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASILGS 434
AR +S T V Y+P +NPSG+ PV+ + L+ P IL+ G+
Sbjct: 243 -ARANSRNT-VSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAGT 287
>gi|373251926|ref|ZP_09540044.1| protein-export membrane protein SecY [Nesterenkonia sp. F]
Length = 435
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 23/294 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDELGDF-- 204
A F ++RR+++ T +I I RIG FIP PG D + Q L G V +
Sbjct: 6 ARVFQTPDLRRKIWFTIGIIAIYRIGAFIPAPGVDYGTVQQCLALGNTEGGVYSFVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L++S F LGI P I A+I++Q+L ++P L++EG G K+ Y ++++
Sbjct: 66 GGAMLQVSIFALGIMPYITAAIIVQLLRVVIPRFENLQREGPQGQAKLTQYTRYLTIALG 125
Query: 264 ILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
L A + + ++ S+ +++ LV G + W+ + I+E G G
Sbjct: 126 TLNATTIVTMARSGALLGCDLPIVPDDSLGVILLMILALVTGVALIMWLGEQITERGVGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G S++I V I G+ + ++ S+ W F L LL +V + AVV V + R+
Sbjct: 186 GMSILIFVSIAAGFPGAMGEIW-----STQGWRIFALVLL--IGLVAIAAVVFVEQSQRR 238
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
V +QY ++ S YIP +N +G+ PV+ + +L PS++A
Sbjct: 239 VPVQYAKRQVGRRTLGGS-----STYIPIKVNMAGVIPVIFASSVLTLPSVIAQ 287
>gi|340795289|ref|YP_004760752.1| preprotein translocase subunit [Corynebacterium variabile DSM
44702]
gi|340535199|gb|AEK37679.1| preprotein translocase subunit [Corynebacterium variabile DSM
44702]
Length = 443
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 164/347 (47%), Gaps = 32/347 (9%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGD 203
+F +++RR++ T ++++ RIG IP PG D + + + S S+ L
Sbjct: 7 AFRDADLRRKILFTLGMVILYRIGSQIPTPGVDYATVTEQVRNLTSDGQTSMYSLINLFS 66
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 67 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEQLKKEGQSGQAKMTEYTRYLTVALA 126
Query: 264 ILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ + + + + V ++ ++ GA+ + WI + I++ G G
Sbjct: 127 LLQSSGIVALANNKQLLGSGQQVLRDDVGLFGIITMVVIMTAGAVLVMWIGELITDRGIG 186
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SL+I G+ T + +S L S +P G++ ++ + V V +G R+
Sbjct: 187 NGMSLLIVAGMATHLPA---QGMSILQDSGGFVFP---GVVVAMLVLVVLVVFVEQGQRR 240
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ S
Sbjct: 241 IPVQYA--KRMVGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGG 295
Query: 437 WQHV-----KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+ ++++N T W Y A + F F VSI Y
Sbjct: 296 GEQADNWWNRDVMNILTD--PSDWRYIVFMAVMIIFFAFF-YVSIQY 339
>gi|89893237|ref|YP_516724.1| preprotein translocase subunit SecY [Desulfitobacterium hafniense
Y51]
gi|423073108|ref|ZP_17061851.1| preprotein translocase, SecY subunit [Desulfitobacterium hafniense
DP7]
gi|89332685|dbj|BAE82280.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855938|gb|EHL07872.1| preprotein translocase, SecY subunit [Desulfitobacterium hafniense
DP7]
Length = 429
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 41/335 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
EIR ++ T ++ +I RIG IP+P I D LS + GS L DF G+
Sbjct: 14 EIRTKIGFTLLMFLIFRIGAHIPIP-----FINHDILSNILGS-GTLYDFLDTFSGGSFR 67
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IWWI 258
+ S F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y I
Sbjct: 68 RFSVFALSITPYITASIILQLLTIVIPSLERLAKEGEFGRKKITQYTRYGTVILGFIQGF 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+ F + A+I+ + ++IY ++ A +L G + W+ + I+E+G G G
Sbjct: 128 GMTFGLRGALIIPKPGMEWAIY---------LLVALILTAGTAFLMWLGERITENGIGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SLII GI+ G + + ++ L + + + GL+ + + V + EG R+++
Sbjct: 179 ISLIIFAGIVAGVPDAIKRIAGLLSVGEINVFS-VFGLIVIGLGIIAGVVFIQEGQRRIQ 237
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 436
+QY A +IP +N +G+ P++ LLAFPS +A+ + S +
Sbjct: 238 VQY-----AKRVVGRRVYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMDPASAY 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V S+ + P Y +YA + F F
Sbjct: 293 VRFVNTWFVMNGSLTSIP--YLIVYAVLIIFFTYF 325
>gi|187918364|ref|YP_001883927.1| preprotein translocase subunit SecY [Borrelia hermsii DAH]
gi|119861212|gb|AAX17007.1| protein translocase subunit SecY [Borrelia hermsii DAH]
Length = 434
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 154/314 (49%), Gaps = 27/314 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
++R + T ++ I R+G ++P+PG D + + S S+ DF GA S
Sbjct: 13 DLRSKFLFTLFILFIFRVGSYLPIPGVDPVALRSYFKSQSDFSITNYFDFFSGGAFSNFS 72
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F L I P I ASI++Q+L + PSL ++ +EG +G +KIK Y ++++ A+ + +
Sbjct: 73 IFMLSIGPYISASIIIQLLVYSFPSLKKM-QEGDNGRKKIKKYTKYLTIVAAVAQGYATS 131
Query: 272 CY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
Y S+P ++ + +++ + + G + W+ + I++ G G G SLII GI+
Sbjct: 132 LYAKSIPGALNIPFY--RYIFIAILTVTTGTFVLLWLGEQINQRGIGNGVSLIIFSGIVV 189
Query: 330 GYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
L+ + + P F++ +LGVF +V + + + R++ + Y
Sbjct: 190 RLQAALFNLFQSMRDPLQNINPVFVILVLGVFILVVILIIYEYKAQRRIAIHY------- 242
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASILG-SPFWQHVKEILNP 446
AR +S T V Y+P +NPSG+ PV+ + L+ P IL+ G S + + L P
Sbjct: 243 -ARANSRNT-VSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAGTSALSRQILSYLRP 300
Query: 447 ETSVGARPWVYYTI 460
+YYT+
Sbjct: 301 N-------GLYYTL 307
>gi|218135261|ref|ZP_03464065.1| hypothetical protein BACPEC_03166 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990646|gb|EEC56657.1| preprotein translocase, SecY subunit [[Bacteroides] pectinophilus
ATCC 43243]
Length = 441
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 28/302 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
EIR +L T +IVI RIG +P+PG D +Y S + V++L G+
Sbjct: 12 KEIRNKLLYTFAMIVIMRIGSLVPIPGVD-----TEYFSTLLNKVEDLSLLDAFTGGSFE 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
++S F L I+P I +SI++Q+L +P L +++KEG DG K+ + ++++G A+++++
Sbjct: 67 RMSVFALSITPYITSSIIIQLLTIAIPKLEEMQKEGEDGRRKMAAITRYVTVGLALIQSI 126
Query: 269 IVAC------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
+A Y + H V ++V L G+ + WI + I+E+G G G S++
Sbjct: 127 AMAVGFGKQGLIAGYKGMSTVHYVASIIVVIATLTAGSAILMWIGERITENGVGNGISIV 186
Query: 323 ICVGILTGYTETLYKMLSQLLG--SSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
+ V I++ E + + Q + S + +L + + + + +G R+++++
Sbjct: 187 LLVNIISSIPEDMVVLFEQFVKPQSIAKGVLAAAIILAILVALVAFICFLQDGERRIEVR 246
Query: 381 YYGFKLASAAR---EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
Y K+ A + + T IP +N +G+ P++ + L+ FP IL + +
Sbjct: 247 YAN-KINGAGKLPYQGGRTTN----IPLKVNTAGVMPIIFASSLMQFPVILVQLFSTK-- 299
Query: 438 QH 439
QH
Sbjct: 300 QH 301
>gi|149202864|ref|ZP_01879835.1| protein translocase subunit SecY [Roseovarius sp. TM1035]
gi|149143410|gb|EDM31446.1| protein translocase subunit SecY [Roseovarius sp. TM1035]
Length = 447
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 37/336 (11%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+E+R+R+ T L+++ R+G FIP+PG D + + F+ G+ +G GA
Sbjct: 14 TELRKRILFTLGLLIVYRLGTFIPVPGIDGVALRE----FMEGAQASIGGMLSMFTGGAL 69
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L++
Sbjct: 70 GRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRYGTVALATLQS 129
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A SL ++ + + L+ G M + W+ + I+ G G G SLII VGI
Sbjct: 130 YGLAV-SLQSGDMVSNPGMFFIASCMITLIGGTMFLMWLGEQITARGVGNGISLIIFVGI 188
Query: 328 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----Y 382
+ L + + G S P ++G++ + V + V + RK+ +QY
Sbjct: 189 IAEVPAALAQFFAS--GRSGAVSPAVIVGVMLMVVAVIAFVVFMERSLRKIHIQYPRRQV 246
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQH 439
G K+ ++P +NP+G+ P + + LL P+ + + G +P
Sbjct: 247 GMKIYDGGSS---------HLPVKVNPAGVIPAIFASSLLLLPATITTFSGNTTNPVLST 297
Query: 440 VKEILNPETSVGARP--WVYYTIYAFFVFLFNIFDI 473
V P +P +++TI F F F++
Sbjct: 298 VMAYFGP-----GQPLYLLFFTIMIVFFAYFYTFNV 328
>gi|260438196|ref|ZP_05792012.1| preprotein translocase, SecY subunit [Butyrivibrio crossotus DSM
2876]
gi|292809388|gb|EFF68593.1| preprotein translocase, SecY subunit [Butyrivibrio crossotus DSM
2876]
Length = 443
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 154/302 (50%), Gaps = 24/302 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A +F EIR R+ T +++++ RIG +P+PG +R S G L +
Sbjct: 6 ANAFKVKEIRNRIIFTFIMLIVVRIGSILPIPGINR----DQLASIFQGDGSALANAFTG 61
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L++S F L I+P I +SI++Q+L +P L +++K+G DG +KI++ ++++ A+
Sbjct: 62 GALLQMSVFALSITPYITSSIIVQLLTIAIPKLEEMQKDGEDGRKKIQTITRFVTVALAL 121
Query: 265 LEAV-IVACYSLP-----YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+E++ +V + YS AA V+ ++ +L G+ + W+ + I+E G G G
Sbjct: 122 IESIAMVVGFGKSGLIEGYSTMAALERVRVSVMIVAILTAGSTLLMWLGERITERGVGNG 181
Query: 319 SSLIICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVT-MWAVVVTEGC 374
S+I+ + I++ E LYK S + G SV + ++ + T ++ V++ G
Sbjct: 182 ISIILVINIVSRLPEDFVALYK--SFVKGQSVLNATIAIVVILAVVVGTILFTVLLCGGE 239
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + + IP +N +G+ PV+ L+ FP I+ I+
Sbjct: 240 RRIPVQY-----SKKVQGRRTYGGNSSNIPLKVNTAGVIPVIFAQSLMTFPLIIMQIVKP 294
Query: 435 PF 436
F
Sbjct: 295 NF 296
>gi|257054490|ref|YP_003132322.1| preprotein translocase subunit SecY [Saccharomonospora viridis DSM
43017]
gi|256584362|gb|ACU95495.1| protein translocase subunit secY/sec61 alpha [Saccharomonospora
viridis DSM 43017]
Length = 435
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 162/355 (45%), Gaps = 48/355 (13%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGF--------DRRLIPQDYLSFVSGSVDELGDFGA 206
++R+++ T +++ I RIG P PG ++ Q+ S ++ L GA
Sbjct: 13 DLRKKILFTLMIVAIYRIGAVTPAPGVSYPNVQACQAQVEDQNIFSLLN-----LFSGGA 67
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
L+LS F GI P I ASI++Q+L ++P +L++EG G K+ Y ++++ A+L+
Sbjct: 68 LLQLSVFATGIMPYITASIIVQLLTVVIPRFEELKREGQAGQGKLTQYTRYLTIALAVLQ 127
Query: 267 AVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A V + ++A +SV + +T + G M W+ + I+E G G G
Sbjct: 128 ATGVVALADRGQLFANCDQPVLPDNSVYSLTLTVLTMTAGTAVMMWLGELITERGVGNGM 187
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I + I +LS G + F + LL + I ++ + V +G R++ +
Sbjct: 188 SLLIFLNIAAQIPTEGANILSSQGGLTF----FFICLLALAIIASV--IFVEQGQRRIPV 241
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---- 435
QY + + Y+P +N +G+ PV+ + LL P ++ ++G P
Sbjct: 242 QYAKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLIGQLVGDPNQAS 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
WQ + + S WV+ T+Y + F F I TIT V+D
Sbjct: 297 GWQRFLQNYVSDQS----HWVHITLYFAMIMFFTYFYI---------TITFNVDD 338
>gi|345008590|ref|YP_004810944.1| preprotein translocase subunit SecY [Streptomyces violaceusniger Tu
4113]
gi|344034939|gb|AEM80664.1| preprotein translocase, SecY subunit [Streptomyces violaceusniger
Tu 4113]
Length = 437
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 146/302 (48%), Gaps = 26/302 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG + + + Q + G G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLFRLGQHIPIPGINYKNV-QTCMDLAKGQQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGQSKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 308
+++ AIL+ + + S++ + S+ V + G + W+ +
Sbjct: 120 LTIALAILQGTGLVATARSGSLFQSCPVGGQIVRDDSIFTTAVMVITMTAGTALIMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 366
+++ G G G S+++ V I G+ ++ K +++G W F L +L +V +
Sbjct: 180 LVTDRGIGNGMSILMFVSIAAGFPSAMWSIKQQGKIMGG---WLEFGLVILCGLAMVGL- 235
Query: 367 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P+
Sbjct: 236 VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPMKVNQAGVIPVIFASSLLYIPA 290
Query: 427 IL 428
++
Sbjct: 291 LI 292
>gi|300022561|ref|YP_003755172.1| preprotein translocase subunit SecY [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524382|gb|ADJ22851.1| preprotein translocase, SecY subunit [Hyphomicrobium denitrificans
ATCC 51888]
Length = 447
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 168/349 (48%), Gaps = 36/349 (10%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L+S LN +A F K+E ++RRL+ T +++ R+G FIP+PG + + + S G
Sbjct: 7 QLASNLNFSA--FAKAEDLKRRLWFTLGALIVYRLGTFIPMPGINPAAFAETFKSQAGGI 64
Query: 198 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+ F GA +L+ F L I P I ASI+MQ++ I P L L+KEG G ++I Y
Sbjct: 65 LGMFNMFSGGALERLAIFALNIMPYISASIIMQLMTSISPKLEALKKEGEAGRKQINQYT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMSWI 306
++++ A L+A Y + + + +S V++ T LV G + + W+
Sbjct: 125 RYLTVVLAALQA-----YGIAVGLEGSQNSAGAVVLDPGLFFRATTVITLVGGTVFLMWL 179
Query: 307 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 366
+ +++ G G G+SLII GI+ G + ++ L + P +L V + +
Sbjct: 180 GEQVTQRGVGNGTSLIIFAGIVAGLPGAVVQLFE--LSRTGSISPAILLFFIVLALAVVA 237
Query: 367 AVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
A+V E R++ +QY ++ + + ++P +NPSG+ P + + LL P
Sbjct: 238 AIVFCEQAQRRLLVQYPKRQVGNKMFQGE-----ASHLPLKLNPSGVIPPIFASSLLLLP 292
Query: 426 SILASILG--SPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF 471
+A P W LN ++ G+ ++ IYA + F F
Sbjct: 293 ITVAQFTAGQGPEW------LNTAVAMLGSGQPLHLFIYAAMIIFFTFF 335
>gi|390934141|ref|YP_006391646.1| preprotein translocase subunit SecY [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569642|gb|AFK86047.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 418
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 162/338 (47%), Gaps = 32/338 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 194
+LN+ ++ ++IR+++ T +++++ R+G IP+PG D + ++ Q + +
Sbjct: 1 MLNSLVNAWKVADIRKKIIYTVLMLLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDII 60
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
SG GA + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y
Sbjct: 61 SG--------GAFRDFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQY 112
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++++ A+++A+ ++ + ++ + L G + W+ + I+E+G
Sbjct: 113 TRYMTVVLALIQAI---GMTIGLRSAVIQPNFLNLTIIVLTLTAGTSFLMWLGERITENG 169
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G GSSLII GIL +Y + Q +G+ + L V ++ + ++++EG
Sbjct: 170 VGNGSSLIIFAGILARIPNMVYTTV-QYVGAGTANIFGAIAFLIVILVMVVSIILMSEGQ 228
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-G 433
R++ +QY A +IP IN +G+ P++ LL FP +A+
Sbjct: 229 RRIPVQY-----AKRVVGRKVYGGQSTHIPIRINMAGVIPLIFALSLLQFPQQIATFFPK 283
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S F+ ++ L G W+Y + + F F
Sbjct: 284 SAFYAFTEKWL------GTNGWIYNILNVLLIIFFTYF 315
>gi|383784167|ref|YP_005468736.1| preprotein translocase subunit [Leptospirillum ferrooxidans C2-3]
gi|383083079|dbj|BAM06606.1| preprotein translocase subunit [Leptospirillum ferrooxidans C2-3]
Length = 437
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 163/343 (47%), Gaps = 27/343 (7%)
Query: 137 FIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG 196
F R+S V+ N + E+R+R+ T ++ + RIG +IP PG + + YL G
Sbjct: 2 FERISKVIGNIGKI---PELRQRILFTLGMLAVYRIGAYIPTPGVNGNAL-SAYLHQNGG 57
Query: 197 SVDELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKS 253
++ D GA +L+ F LGI P I ASI++Q+L + PSL L KEG G + I
Sbjct: 58 ALIGFFDMFSGGALSRLTIFALGIMPYISASIILQLLTVVHPSLQALAKEGERGRKVITK 117
Query: 254 YIWWISLGFAILE--AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
Y ++++ A+++ + + S+ + ++ L + W+ + I+
Sbjct: 118 YTRYLTVLIALIQSFGIAIGLESMNRGQFVPHPGWPFRILVVITLTTATTFIMWLGEQIT 177
Query: 312 ESGFGQGSSLIICVGILTGYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
E G G G SLII GI+ + YK+ +Q + + ++GL+ + ++ V
Sbjct: 178 ERGVGNGISLIIFSGIIARLPSAILNTYKLYNQ---GEISGF-LIIGLVVMVAVIVGSIV 233
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ RKV +QY A + + YIP IN +G+ P + + L+AFP+ +
Sbjct: 234 FIETARRKVPVQY-----AKRLVGNKMMGGQSTYIPLKINTAGVIPPIFASSLIAFPATI 288
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
AS + P+ Q++ + L P + + Y +Y + F+ F
Sbjct: 289 ASFITLPWIQNIGKSLAPGS------FSYTLLYVLLIIFFSFF 325
>gi|254421758|ref|ZP_05035476.1| preprotein translocase, SecY subunit [Synechococcus sp. PCC 7335]
gi|196189247|gb|EDX84211.1| preprotein translocase, SecY subunit [Synechococcus sp. PCC 7335]
Length = 437
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 151/293 (51%), Gaps = 25/293 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR----RLIPQDYLSFVSGS 197
+A E+F + + +R RL VT L+V+ R+G +IP+PG DR + V G
Sbjct: 10 SAQETFLQMAQAAGLRSRLLVTIGLLVLVRLGIYIPVPGIDRAAFSNFVQGGGAGGVLGF 69
Query: 198 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 256
+D +G G L + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 LDIIGGGGLSL-VGIFALGILPFINASIIMQLLTAAIPALEDLQKNEGEAGRRKISQVTR 128
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+++ G+ I+++ +++C+ L +A V V+ T L G+M + W+ + I+E G G
Sbjct: 129 YVAFGWTIVQSTMLSCFLL--RDFAYDFGVPFVIETVIALTAGSMFVMWVGELITERGLG 186
Query: 317 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G+SL+I + I++ L + L+Q S +L L+ + TI+ + V V EG
Sbjct: 187 NGASLLIFLNIVSSLPRVLGETVDLAQTGDRSTIGGIVILFLVFIATIIGI--VFVQEGT 244
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEP--YIPFNINPSGMQPVLTTTYLLAFP 425
R++ + SA R+ +E Y+P +N G+ P++ + +L P
Sbjct: 245 RRI-------PIVSARRQVGRKLYLEKSNYLPLRLNQGGVMPIIFASSMLIIP 290
>gi|425745952|ref|ZP_18863986.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-323]
gi|425487098|gb|EKU53457.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-323]
Length = 440
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 24/292 (8%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + Q F + LG F GA
Sbjct: 11 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAQ---FFKANEGTFLGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLFLALVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 127 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 184
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI+ G L ++ Q S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 185 GIVAG----LPNLVIQSFTSVQNGQGSLIGLVVFGLLSLAVLAAIVFIEKAQRRIPVNY- 239
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 240 ----AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 287
>gi|379796552|ref|YP_005326553.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356873545|emb|CCE59884.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 430
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + S +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQSAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|258422677|ref|ZP_05685582.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9635]
gi|417890904|ref|ZP_12534972.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21200]
gi|418283840|ref|ZP_12896577.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21202]
gi|418306861|ref|ZP_12918620.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21194]
gi|418560142|ref|ZP_13124664.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21252]
gi|418887466|ref|ZP_13441605.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418992221|ref|ZP_13539866.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG290]
gi|257847088|gb|EEV71097.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9635]
gi|341853782|gb|EGS94662.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21200]
gi|365165751|gb|EHM57500.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21202]
gi|365246252|gb|EHM86822.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21194]
gi|371972853|gb|EHO90222.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21252]
gi|377749538|gb|EHT73486.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG290]
gi|377756079|gb|EHT79976.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 430
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + S +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQSAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|163815995|ref|ZP_02207365.1| hypothetical protein COPEUT_02175 [Coprococcus eutactus ATCC 27759]
gi|158448805|gb|EDP25800.1| preprotein translocase, SecY subunit [Coprococcus eutactus ATCC
27759]
Length = 437
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 148/288 (51%), Gaps = 12/288 (4%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
+F +IRRRL T ++V+ R+G I +PG I + + + S++ F G+
Sbjct: 7 NAFKVQDIRRRLLYTFFILVVIRLGSLITVPGISADAIREYMQNALGDSLNIFSSFTGGS 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S F L ++P I ASI++Q+L +P+L +++K+G DG +KI + ++++G AILE
Sbjct: 67 FEQMSIFALSVTPYITASIIIQLLTIAIPALEEMQKDGEDGRKKITAITRYMTVGLAILE 126
Query: 267 AV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ +V + I +++ V+ +L G+ + W+ + +E G G G S+I+ +
Sbjct: 127 SSGLVVGFGNKGVI--DNYNFWTVLTIVVILTAGSAIVMWLGERATEKGVGNGISVILLI 184
Query: 326 GILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
I++ L M +Q + VR+ L ++ V + ++ + RK+ +QY
Sbjct: 185 NIVSTMPNDLKNMYTQFMKGKDFVRFTLVCLLIIAVIILTVVFVCALQGAERKIPVQY-- 242
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
A R + +IP +N +G+ PV+ + LL+ P I+ ++
Sbjct: 243 ---AKTVRGRKTMGGQSSHIPLKVNTAGVIPVIFASSLLSVPQIIVNL 287
>gi|172040034|ref|YP_001799748.1| preprotein translocase subunit SecY [Corynebacterium urealyticum
DSM 7109]
gi|171851338|emb|CAQ04314.1| preprotein translocase SecY subunit [Corynebacterium urealyticum
DSM 7109]
Length = 471
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 45/354 (12%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDFG 205
+F ++R+++ T +I++ RIG IP PG D I + S + L G
Sbjct: 34 AFKNVDLRKKILFTLAMIILYRIGSQIPTPGVDYANITKQISELTESSAVYSLINLFSGG 93
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L
Sbjct: 94 ALLQLSIFAIGIMPYITASIIVQLLTVVIPKFEQLKKEGQTGQAKMTEYTRYLTVALALL 153
Query: 266 E-AVIVACYS----LPYSIYAASHSVK--HVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+ A IVA L I V ++V ++ GA+ + W+ + I++ G G G
Sbjct: 154 QSAGIVALADREQLLGQGIPVLKDEVGIFGLIVMVLIMTSGAVLVMWLGELITDRGVGNG 213
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM--WAVVVTEGCRK 376
SL+I GI T +LS G F+ G + VF ++ + V V +G R+
Sbjct: 214 MSLLIMAGIATTLPGEGVSILSNSGG-------FIFGAV-VFGMLLLIVGVVFVEQGQRR 265
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP- 435
+ +QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ S
Sbjct: 266 IPVQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGA 320
Query: 436 ---------FW-QHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+W ++V +L NP W Y +Y + F+ F VS+ Y
Sbjct: 321 AAGEDVANNWWNRNVMTVLQNPAA------WQYILVYLALIIFFSFF-YVSVQY 367
>gi|78185540|ref|YP_377974.1| preprotein translocase subunit SecY [Synechococcus sp. CC9902]
gi|78169834|gb|ABB26931.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp.
CC9902]
Length = 439
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 18/300 (6%)
Query: 175 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 232
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 233 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 291
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 SLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYAVEGLSEVV-FVVQ 160
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRW 349
TA LV G+M + WI + I+E G GQG+SL+I + I+ TL + +Q
Sbjct: 161 TALALVTGSMVVMWIAEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 350 WPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINP 409
+L L+ + TIV + + V EG R++ + ++ A + + Y+P +N
Sbjct: 221 GIVVLVLVFLATIVGI--IFVQEGARRIPIVSAKRQVGGAG----ALPTRQSYLPLKLNA 274
Query: 410 SGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN 469
G+ P++ + L+ P +A++ S + +LNP S PW Y AFF +
Sbjct: 275 GGVMPIIFASALIFLPVTVANLTKSEWLIRAASMLNPSAS---NPWPYA--LAFFTLILG 329
>gi|422743282|ref|ZP_16797274.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA177]
gi|320143502|gb|EFW35283.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 430
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R+++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRKKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|76789247|ref|YP_328333.1| preprotein translocase subunit SecY [Chlamydia trachomatis
A/HAR-13]
gi|76167777|gb|AAX50785.1| SecY [Chlamydia trachomatis A/HAR-13]
Length = 457
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 37/345 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSGQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ + L S + + + +L+P + V Y+I+ + +F
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIF 338
>gi|399991408|ref|YP_006571648.1| preprotein translocase SecY [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400755750|ref|YP_006564118.1| preprotein translocase SecY [Phaeobacter gallaeciensis 2.10]
gi|398654903|gb|AFO88873.1| preprotein translocase SecY [Phaeobacter gallaeciensis 2.10]
gi|398655963|gb|AFO89929.1| preprotein translocase SecY [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 454
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 140/280 (50%), Gaps = 11/280 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R R+ T L+++ R+G +IP+PG D + Q S G + F GA ++
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTYIPVPGIDADALRQFMTSAGQGIGGMVSMFTGGALGRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKINQYTRYGTVLLATAQAYGLA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL A + + LV G M + W+ + I++ G G G SLII VGI+
Sbjct: 141 V-SLESGDLATDPGMYFRLACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGIIAEV 199
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ + L+ G S P ++ ++ + + M+ V + RK+ +QY ++
Sbjct: 200 PAAIAQFLAS--GRSGAISPAVIIAVILMMIAIIMFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ ++P +NP+G+ P + + LL P +++
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTIST 292
>gi|229489416|ref|ZP_04383279.1| preprotein translocase, SecY subunit [Rhodococcus erythropolis
SK121]
gi|453068383|ref|ZP_21971662.1| preprotein translocase subunit SecY [Rhodococcus qingshengii BKS
20-40]
gi|229323513|gb|EEN89271.1| preprotein translocase, SecY subunit [Rhodococcus erythropolis
SK121]
gi|452766033|gb|EME24284.1| preprotein translocase subunit SecY [Rhodococcus qingshengii BKS
20-40]
Length = 439
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 159/337 (47%), Gaps = 39/337 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------GA 206
++RR++ T L+ + R+G IP PG D + Q ++ S D G + GA
Sbjct: 13 DLRRKILFTLGLVALYRVGALIPSPGVDYGRVRQ--CIDIANSGDSAGIYSLINLFSGGA 70
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
L++S F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+
Sbjct: 71 LLQMSIFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQ 130
Query: 267 AV-IVACYSLPYSIYA-----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+ IVA + + A S+ +++ ++ GA + W + I+E G G G S
Sbjct: 131 STGIVALAARGQLLQGCDDIIADKSIFGLVIIVLVMTAGAAMVMWFGEVITERGVGNGMS 190
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKL 379
L+I GI + +L P + + + ++ + VV V +G R++ +
Sbjct: 191 LLIFAGIASRIPSEGKAILDS-------RGPLVFAFVCLAALLIIAGVVFVEQGQRRIPV 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----- 434
QY + S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 244 QYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTSASTAVD 298
Query: 435 -PFWQHVKE--ILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + ++NP V +Y+ + FF + +
Sbjct: 299 PSWWQRLINTYLVNPANPV--YIAIYFGLIVFFTYFY 333
>gi|381395965|ref|ZP_09921657.1| preprotein translocase subunit SecY [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379328145|dbj|GAB56790.1| preprotein translocase subunit SecY [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 436
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 11/285 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
SE+R RLF I++ R+G ++P+PG D ++ Q + V F GA + S
Sbjct: 15 SELRSRLFFVLGAIIVFRLGSYVPIPGIDSNVLSQIFEQQTGTIVGMFNMFSGGALERAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
LGI P I ASI+MQ+L + +L+KEG G KI Y +++L A +++ +A
Sbjct: 75 VLALGIMPYITASIIMQLLAAVHEPFKELKKEGQSGQRKISQYTRYLTLILASFQSIGIA 134
Query: 272 CYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
LP I + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 135 T-GLPQMIPGLVTDPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVA 193
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
G + + Q ++ F+L L + +T V V R++ + Y A
Sbjct: 194 GLPSAIGQTAEQARQGEIQLL-FLLVLAAIIIALTYLVVFVERAQRRIVVNY-----AKR 247
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + ++ FPS L+ +LG
Sbjct: 248 QQGRKVFAAQSSHLPLKVNMAGVIPPIFASSIILFPSTLSGMLGQ 292
>gi|375098830|ref|ZP_09745093.1| preprotein translocase, SecY subunit [Saccharomonospora cyanea
NA-134]
gi|374659562|gb|EHR59440.1| preprotein translocase, SecY subunit [Saccharomonospora cyanea
NA-134]
Length = 453
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 48/355 (13%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGF--------DRRLIPQDYLSFVSGSVDELGDFGA 206
++R+++ T +++ + RIG P PG ++ Q+ S ++ L GA
Sbjct: 31 DLRKKILFTLMIVAVYRIGAVTPAPGVSYPNVQACQAQVEDQNIFSLLN-----LFSGGA 85
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
L+LS F GI P I ASI++Q+L ++P +L++EG G K+ Y ++++ AIL+
Sbjct: 86 LLQLSIFATGIMPYITASIIVQLLTVVIPRFEELKREGQAGQGKLTQYTRYLTIALAILQ 145
Query: 267 AVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A V + ++ +SV + +T + G M W+ + I+E G G G
Sbjct: 146 ATGVVALADRGQLFGNCDQPVLPDNSVYTLALTVLTMTAGTAVMMWLGELITERGVGNGM 205
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I + I +LS G + F + LL + I ++ + V +G R++ +
Sbjct: 206 SLLIFLNIAARIPTEGAAILSNQGGLTF----FFICLLALAIIASV--IFVEQGQRRIPV 259
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---- 435
QY + + Y+P +N +G+ PV+ + LL P +L ++G P
Sbjct: 260 QYAKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLLGQLIGDPNQAS 314
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
WQ + + S WV+ T+Y + F F I TIT V+D
Sbjct: 315 GWQRFLQNYVTDQS----HWVHITLYFAMIIFFTYFYI---------TITFNVDD 356
>gi|406923873|gb|EKD60849.1| hypothetical protein ACD_54C00524G0001 [uncultured bacterium]
Length = 453
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 145/287 (50%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++R R+F T L+++ R+G ++P+PG D + + F+ + LG GA
Sbjct: 21 TDLRSRIFFTIGLLMVYRLGTYVPVPGIDGTALRE----FMDNAGQGLGGMLSMFTGGAI 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L +VP+L Q++KEG G +K+ + + ++ A+ +
Sbjct: 77 TRMGIFALGIMPYISASIIIQLLASMVPALEQMKKEGDAGRKKMNQWTRYGTVFLAVFQG 136
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A S+ A + + V+ LV G M + W+ + I+ G G G SLII GI
Sbjct: 137 YGIAM-SIQAGGLAHTPGMFFVISCVVTLVGGTMFLMWLGEQITARGIGNGISLIIFTGI 195
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ L + SQ + V P +LG+L + +V V + RK+ +QY ++
Sbjct: 196 VAEIPAALAQFFSQGR-AGVISTPVILGVLIMVVVVIAAVVFMERALRKIHIQYPRRQVG 254
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P+ +A+ G+
Sbjct: 255 MKVYDGG-----SSHLPIKVNPAGVIPAIFASSLLLLPTTVATFSGA 296
>gi|33519678|ref|NP_878510.1| preprotein translocase subunit SecY [Candidatus Blochmannia
floridanus]
gi|33517341|emb|CAD83726.1| preprotein translocase subunit secY [Candidatus Blochmannia
floridanus]
Length = 451
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 141/278 (50%), Gaps = 8/278 (2%)
Query: 157 RRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQ 214
+R +F+ LI+ RIG FIP+PG D ++ + +D L F G+ + S F
Sbjct: 26 QRIIFIVGALIIF-RIGSFIPIPGVDLTVLSKILQEQQGTIIDMLNIFSGGSLSRASIFS 84
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VIVAC 272
LGI P I ASI++Q+L + P+L++++KEG G I YI + +L L++ +++
Sbjct: 85 LGIMPYISASIIVQLLTTVHPTLIEIKKEGESGRRAINRYIRYGTLILGTLQSLGIVIGL 144
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
++P + + V V + LV G + + W+ D I+ G G G S+II GI+ G
Sbjct: 145 PNIPNLVINPGFNFYFVAVIS--LVSGTIFLMWLGDQITNHGIGNGISVIIFSGIVAGLP 202
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
+ + Q+ + + ++ +L + V +I T + V + G R++ + Y K R
Sbjct: 203 AAIGHTIEQVRQNELHFFVLVLIVCLVISI-TFFVVFMERGQRRILVHYANPKRQQGRRM 261
Query: 393 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
S ++P +N +G+ P + + ++ FPS + S
Sbjct: 262 YSTQQGNSTHLPLKVNMAGVIPAIFASSIILFPSTIIS 299
>gi|374578966|ref|ZP_09652060.1| preprotein translocase, SecY subunit [Desulfosporosinus youngiae
DSM 17734]
gi|374415048|gb|EHQ87483.1| preprotein translocase, SecY subunit [Desulfosporosinus youngiae
DSM 17734]
Length = 428
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 157/331 (47%), Gaps = 32/331 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELK-L 210
S++R+++ T ++ +I RIG IP P DR + Q F SG++ D G K L
Sbjct: 13 SDLRKKIGYTLLMFLIFRIGAHIPTPFIDRDTLNQ---MFGSGAMMNFMDTISGGSFKSL 69
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F L I+P I ASI++Q+L ++P+L +L KEG G +KI Y + ++G ++A+
Sbjct: 70 SVFALSITPYITASIILQLLTIVIPTLERLSKEGDYGRKKITQYTRYSTVGLGFIQAL-- 127
Query: 271 ACYSLPYSIYAASHSVKHVM------VTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
L Y I AA + M + A +L G + WI + I+E G G G SLII
Sbjct: 128 ---GLTYGIRAAVNISSPAMQWPTYLLIALVLTAGTAFLMWIGEAITEKGIGNGISLIIF 184
Query: 325 VGILT---GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
GI++ +L+ ML +G L L+ F +T + V EG R+V +QY
Sbjct: 185 AGIVSRVPSAIRSLWDMLR--VGEINILSIIGLILIVAF--ITAGVIYVQEGQRRVTVQY 240
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHV 440
A +IP +N +G+ PV+ LLAFP +AS S F + V
Sbjct: 241 -----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAMSLLAFPQTIASWTPTSGFARFV 295
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S+ + P Y +Y + F F
Sbjct: 296 NTWFSMNGSITSIP--YLLLYGALILFFTYF 324
>gi|333896208|ref|YP_004470082.1| preprotein translocase subunit SecY [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111473|gb|AEF16410.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 418
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 162/338 (47%), Gaps = 32/338 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 194
+LN+ ++ ++IR+++ T +++++ R+G IP+PG D + ++ Q + +
Sbjct: 1 MLNSLVNAWKVADIRKKIIYTVLMLLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDII 60
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
SG GA + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y
Sbjct: 61 SG--------GAFRDFTIFAMSIIPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQY 112
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++++ A+++A+ ++ + ++ + L G + W+ + I+E+G
Sbjct: 113 TRYMTVVLALIQAI---GMTIGLRSAVIQPNFLNLTIIVLTLTAGTSFLMWLGERITENG 169
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G GSSLII GIL +Y + Q +G+ + L V ++ + ++++EG
Sbjct: 170 VGNGSSLIIFAGILARIPNMVYTTV-QYVGAGTANIFGAIAFLIVILVMVVSIILMSEGQ 228
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-G 433
R++ +QY A +IP IN +G+ P++ LL FP +A+
Sbjct: 229 RRIPVQY-----AKRVVGRKVYGGQSTHIPIRINMAGVIPLIFALSLLQFPQQIATFFPK 283
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S F+ ++ L G W+Y + + F F
Sbjct: 284 SAFYAFTEKWL------GTNGWIYNILNVLLIIFFTYF 315
>gi|162456226|ref|YP_001618593.1| preprotein translocase subunit SecY [Sorangium cellulosum So ce56]
gi|161166808|emb|CAN98113.1| preprotein translocase SecY subunit [Sorangium cellulosum So ce56]
Length = 442
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 26/327 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+RRR+ T V++ + R+G F+ PG DR + Q Y++ SG + + GA LS
Sbjct: 15 ELRRRVIFTLVMLAVYRVGVFVTTPGVDRNAMRQ-YVAKQSGGLLSFFNMFSGGALENLS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ++ + + +LRKEG G +I Y + ++ ++ +A +A
Sbjct: 74 IFALGIMPYISASIIMQLMGMVYKPIDELRKEGEQGRRRIDQYTRYGTVALSLFQAFSIA 133
Query: 272 --CYSLPYSIYAA---SH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
L S A +H + ++T L G + WI + I+E G G SL+I
Sbjct: 134 KMLEGLSSSETGAGIVNHPGIGFQLMTVITLTTGTAFLMWIGEQITERGVSNGVSLLIFA 193
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 384
I+T E + +Q G P + + F + + + E G R++ + Y
Sbjct: 194 SIVTRIPEEIGNYFAQNAGD---LQPLTMAAIVAFIVFVIAVIAFFENGRRQIPIVYSRR 250
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 444
++ ++P +N SG P + + LL FP LA+ + P + ++ I+
Sbjct: 251 QVGRRVYGGQ-----TAHLPLKVNTSGTIPPIFASSLLMFPQTLAN-MNVPGAEQIQAII 304
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
N WV+ T YA + F F
Sbjct: 305 NRGD------WVFNTGYALLIIFFCFF 325
>gi|149915865|ref|ZP_01904389.1| preprotein translocase, SecY subunit [Roseobacter sp. AzwK-3b]
gi|149810188|gb|EDM70034.1| preprotein translocase, SecY subunit [Roseobacter sp. AzwK-3b]
Length = 449
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 145 NNAAESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
N + +F K+ ++R+R+ T L+++ R+G +IP+PG D + +F+ G+ +G
Sbjct: 4 NTSWSAFGKATDLRKRIVFTLGLLIVYRLGTYIPVPGIDG----AELRNFMEGAAASIGG 59
Query: 204 F------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA ++ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y +
Sbjct: 60 MLSMFTGGALGRMGIFALGIMPYISASIIVQLLAAMVPALEQLKKEGEQGRKKINQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
++ A L++ +A SL + + LV G M + W+ + I+ G G
Sbjct: 120 GTVFLATLQSYGLAV-SLQSGGLVTDPGLFFIASCMITLVGGTMFLMWLGEQITARGVGN 178
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRK 376
G SLII VGI+ L + SQ G S P ++ + + I + VV E RK
Sbjct: 179 GISLIIFVGIIAEVPAALAQFFSQ--GRSGAISPAVIIGVIIMVIAVIAFVVFMERSLRK 236
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--- 433
+ +QY ++ + ++P +NP+G+ P + + LL P+ +++ G
Sbjct: 237 IHIQYPRRQVGMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPATISTFSGNET 291
Query: 434 SPFWQHVKEILNP 446
SP + P
Sbjct: 292 SPIMSTIMAYFGP 304
>gi|406935238|gb|EKD69262.1| hypothetical protein ACD_47C00189G0002, partial [uncultured
bacterium]
Length = 377
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 21/275 (7%)
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA- 267
+ S F LGI+P I ASI+MQ+L ++VP L +L KEG +G +KI Y + ++ ++A
Sbjct: 2 RFSIFALGIAPYINASIIMQLLVYVVPQLEKLAKEGTEGRQKISQYTRYGTIFIGAIQAF 61
Query: 268 -----VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
+ A + + H + ++T L G + W+ + I+E G G G SL+
Sbjct: 62 GMSFMLANAGGQGVLTPFMKDHFPRFAILTVLTLTAGTAFIMWLGEKITEKGIGNGISLL 121
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQY 381
I VGI+ + + G ++ ++P M +L FT+ AV+ + +G RK+ +QY
Sbjct: 122 IFVGIVASLPSAIVQTFRVFSGDAL-FYPKMFIIL-FFTVAVTAAVIWIQDGVRKIPVQY 179
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-----PF 436
A YIP IN +G+ P++ + +L FP ++ + G+ F
Sbjct: 180 -----AKRVVGRRVYGGQNTYIPLRINQAGVIPIIFASSILLFPGLITNFFGNYFSMDSF 234
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + +N T +G WVY ++Y + F+ F
Sbjct: 235 MGKITQFIN--TVLGPSHWVYLSLYCLLIIFFSYF 267
>gi|378550959|ref|ZP_09826175.1| hypothetical protein CCH26_12759 [Citricoccus sp. CH26A]
Length = 435
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 23/292 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGD 203
A F ++RR+++ T +IVI R+G F+P PG D + + Q S S +
Sbjct: 6 ARVFRTPDLRRKIWFTLGIIVIYRLGAFVPAPGVDYGAVQVCLDQGNTSGGLYSFVNMFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L++S F LGI P I A+I++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 66 GGAMLQVSIFALGIMPYITAAIIVQLLRVVIPRFEELQKEGAQGQSKLTQYTRYLTIALG 125
Query: 264 ILEAVIVACYSLPYSIYAAS------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+L A +A + ++ + ++ V++ L G + + W+ + I+E G G
Sbjct: 126 LLNATTIASLARTGALLGCNLPIVPDDNLWTVLLLIVTLTTGTIVIMWLGELITEKGVGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G SL+I + I G+ L ++ ++ W F G++ V ++T+ AVV V E R+
Sbjct: 186 GMSLLIFLSIAAGFPAGLGQIW-----TTQGWRVF--GIVLVVGLLTIMAVVFVEESQRR 238
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ +QY A + YIP +N +G+ PV+ + ++ P IL
Sbjct: 239 IPVQY-----AKRQIGRRTVGGTTTYIPIKVNMAGVIPVIFASSIMMLPGIL 285
>gi|87300895|ref|ZP_01083737.1| preprotein translocase SecY [Synechococcus sp. WH 5701]
gi|87284766|gb|EAQ76718.1| preprotein translocase SecY [Synechococcus sp. WH 5701]
Length = 438
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 49/318 (15%)
Query: 175 FIPLPGFDRRLIPQDYLS----------FVSGSVDELGDFGAELKLSFFQLGISPQIVAS 224
+IP+PG DR Q F G + LG F LGI P I AS
Sbjct: 43 YIPVPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLG---------VFALGILPFINAS 93
Query: 225 ILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAAS 283
I++Q+L +P L L+K EG G KI +++LG+ +L++ + A Y++
Sbjct: 94 IILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLLQSTVFALILRQYALPGIP 153
Query: 284 HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLL 343
V V+ T LV GAM + WI + I+E G GQG+SL+I V I+ L + L
Sbjct: 154 MPV-FVIQTTLALVTGAMVVMWISEVITERGIGQGASLVIFVNIVA--------TLPRAL 204
Query: 344 GSSVRWWP--------FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--D 393
GS+V+ ++ L+ +F + + + V EG R++ + SA R+
Sbjct: 205 GSTVKLAESGDRATIGGIVVLVLIFLVTIVGIIFVQEGSRRI-------PIVSAKRQVGQ 257
Query: 394 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 453
+ + + Y+P +N G+ P++ + ++ P +A+I +P+ + LNP +S
Sbjct: 258 ASLASRQSYLPLKLNAGGVMPIIFASAVVFLPLTIANITRAPWLIQLAGYLNPNSST--- 314
Query: 454 PWVYYTIYAFFVFLFNIF 471
PW+Y I+ + F++F
Sbjct: 315 PWLYALIFFALICGFSLF 332
>gi|229818220|ref|ZP_04448502.1| hypothetical protein BIFANG_03518 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784471|gb|EEP20585.1| hypothetical protein BIFANG_03518 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 445
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 25/337 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 202
++ E+R+++ +I+I RIG FIP PG D +++ Q ++ +SG+ + L
Sbjct: 6 QALKTKELRKKILFVLFIIIIYRIGSFIPTPGVDYKVV-QKCVTTLSGNQENFIGLVNLF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGL 124
Query: 263 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ + A ++ S SV +++V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTARSGALFNYQCSQVIPDGSVWNLVVMVMIMTGGTGLIMWMAELITDKGI 184
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 374
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 185 GQGMSVLIFMSICSGFLPQLWEIGYGTNGKNGDWGKFAIVVSVLVVILIF--VDFVELCQ 242
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P IN SG+ P + + +LA P+++A S
Sbjct: 243 RRIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGNS 297
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q + +N + W Y +YA + F F
Sbjct: 298 D--QSWVKWINANLANTTSVW-YIALYALMIVFFCFF 331
>gi|325261514|ref|ZP_08128252.1| preprotein translocase, SecY subunit [Clostridium sp. D5]
gi|324032968|gb|EGB94245.1| preprotein translocase, SecY subunit [Clostridium sp. D5]
Length = 450
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 155/301 (51%), Gaps = 20/301 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F +IR+RLF T +++V+ R+G +P PG D I Q++ + +G
Sbjct: 1 MLGTVRRAFQIEDIRKRLFYTFLMLVVVRLGSQLPTPGVDPTYI-QEFFANQTGDAFNFF 59
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D G+ ++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI + +++
Sbjct: 60 DAFTGGSFTQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIAAITRYVT 119
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC----GAMTMSWICDTISESGF 315
+ A++E++ +A V++ V A ++VC G+ + WI + I+E G
Sbjct: 120 VALALIESIAMAV-----GFGRQGLLVEYNFVNAAIVVCTLTAGSAFLMWIGERITEKGV 174
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLL-GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+++ + I++ + + Q + G S+ ++ +V + V++ +G
Sbjct: 175 GNGISIVLLINIISRVPDDFLTLFEQFVKGKSLAKGGLAAIVILAVLLVVVVFVIILQGG 234
Query: 375 -RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
RK+ +QY + + +IP +N +G+ P++ + L+ FP ++AS LG
Sbjct: 235 ERKIAVQY-----SQKVQGRKTYGGQSTHIPLKVNTAGVIPIIFASSLMQFPVVIASFLG 289
Query: 434 S 434
Sbjct: 290 K 290
>gi|219666510|ref|YP_002456945.1| preprotein translocase subunit SecY [Desulfitobacterium hafniense
DCB-2]
gi|219536770|gb|ACL18509.1| preprotein translocase, SecY subunit [Desulfitobacterium hafniense
DCB-2]
Length = 429
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 41/335 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
EIR ++ T ++ +I RIG IP+P I D LS + GS L DF G+
Sbjct: 14 EIRTKIGFTLLMFLIFRIGAHIPIP-----FINHDILSNILGS-GTLYDFLDTFSGGSFR 67
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IWWI 258
+ S F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y I
Sbjct: 68 RFSVFALSITPYITASIILQLLTIVIPSLERLAKEGEFGRKKITQYTRYGTVILGFIQGF 127
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+ F + A+I+ + ++IY ++ A +L G + W+ + I+E+G G G
Sbjct: 128 GMTFGLRGALIIPKPGMEWAIY---------LLVALILTAGTAFLMWLGERITENGIGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SLII GI+ G + + ++ L + + + GL+ + + V + EG R+++
Sbjct: 179 ISLIIFAGIVAGVPDAIKRIAGLLSVGEINVFS-VFGLIVIGLGIIAGVVFIQEGQRRIQ 237
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPF 436
+QY A +IP +N +G+ P++ LLAFPS +A+ + S +
Sbjct: 238 VQY-----AKRVVGRRVYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMDPTSAY 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V S+ + P Y +YA + F F
Sbjct: 293 VRFVNTWFVMNGSLTSIP--YLIVYAVLIIFFTYF 325
>gi|72163025|ref|YP_290682.1| preprotein translocase subunit SecY [Thermobifida fusca YX]
gi|71916757|gb|AAZ56659.1| protein translocase subunit secY/sec61 alpha [Thermobifida fusca
YX]
Length = 442
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 32/343 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELG 202
+F E+R +L T ++ I R+G IP PG D + + Q + S ++ L
Sbjct: 7 RAFRTPELRNKLLFTLFILTIFRLGAVIPAPGIDSVAIEKCVQQTAETGASNIYALINLF 66
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+L+ F LGI P I ASI++ +L +VP L L+KEG G KI Y ++++
Sbjct: 67 SGGALLQLAVFALGIMPYITASIILNLLTVVVPRLEALKKEGQAGQSKITQYTRYLTIAL 126
Query: 263 AILEAVIV------------ACYSLPYSIYA-ASHSVKHVMVTAFLLVCGAMTMSWICDT 309
A+L++ V AC Y + S+ + +++ F++ G + W +
Sbjct: 127 AVLQSTSVIAMARTGQLFQNACIPEEYMPFLHTSYELPVLIMIVFVMTAGTCVIMWFGEL 186
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G SL+I I+ + + ++ S+ W F L + ++T V
Sbjct: 187 ITERGVGNGMSLLIFTQIIAEFPAGMMRIWSE-----NPAWVFALVCVAGVVLIT-GVVF 240
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
+ + R++ +QY + S YIP +N +G+ PV+ + LL P+++
Sbjct: 241 IEQAQRRIPVQYAKRMVGRRMYGGS-----STYIPLKVNQAGVIPVIFASSLLYLPTLVV 295
Query: 430 SILGSPFWQHVKEILNPE-TSVGARPWVYYTIYAFFVFLFNIF 471
+LG+ V + LN +G P VY T + + F F
Sbjct: 296 GLLGAETDNKVVDFLNTYFNPMGNHP-VYLTTFFLLIVGFAFF 337
>gi|427413174|ref|ZP_18903366.1| preprotein translocase, SecY subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425715990|gb|EKU78976.1| preprotein translocase, SecY subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 420
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 150/301 (49%), Gaps = 33/301 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L + F +E+R ++ T ++ ++ R G IP+PG D +I F SG + L
Sbjct: 1 MLEGLSNIFKITELRNKVAYTLLMFIVFRAGVHIPVPGVDASVIES---LFTSGGLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW-- 257
D GA K S F + I+P I ASI+MQ+L +VP+ Q K+G DG +KI +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLTAVVPTFEQWSKDGEDGRKKIAKVTRYGT 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISES 313
+ LGF V + + Y++ A S +S V+V A +L G + WI + I+
Sbjct: 118 VVLGF-------VQAFGMSYALRANSALIDNSFLSVIVIAIILTAGTCLLMWIGEQITAY 170
Query: 314 GFGQGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
G G G SLII GI+ +G++ T+Y+ L +G+ + + ++ V IV + +
Sbjct: 171 GIGNGISLIIFAGIVARFPSGFS-TIYEYLQ--VGTINIFQAILFAIIAVAMIV--FVIA 225
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
VT+G R++ +QY A ++P +N +G+ P++ + +L FP LA
Sbjct: 226 VTQGQRRIPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTLA 280
Query: 430 S 430
Sbjct: 281 Q 281
>gi|73748336|ref|YP_307575.1| preprotein translocase subunit SecY [Dehalococcoides sp. CBDB1]
gi|289432384|ref|YP_003462257.1| preprotein translocase subunit SecY [Dehalococcoides sp. GT]
gi|452203341|ref|YP_007483474.1| preprotein translocase subunit secY [Dehalococcoides mccartyi
DCMB5]
gi|452204777|ref|YP_007484906.1| preprotein translocase subunit secY [Dehalococcoides mccartyi
BTF08]
gi|73660052|emb|CAI82659.1| preprotein translocase, SecY subunit [Dehalococcoides sp. CBDB1]
gi|288946104|gb|ADC73801.1| preprotein translocase, SecY subunit [Dehalococcoides sp. GT]
gi|452110400|gb|AGG06132.1| preprotein translocase subunit secY [Dehalococcoides mccartyi
DCMB5]
gi|452111833|gb|AGG07564.1| preprotein translocase subunit secY [Dehalococcoides mccartyi
BTF08]
Length = 438
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 161/344 (46%), Gaps = 34/344 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L ++F ++RRRL +T +++ +R +PLPG D + + + + + +L
Sbjct: 10 LLQAMIDAFSLPDLRRRLLITLGILIAARFIAHVPLPGVDSVALQELFDQNGALGMLDLF 69
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA S LG+ P I ASI+M +L ++P L L KEG G KI + W+++
Sbjct: 70 SGGAMRYFSVAALGVYPYITASIIMTLLTPVIPKLSALSKEGDAGRNKINTITHWLAVPT 129
Query: 263 AILEAVIVACYS--LPYSIYAASHSVKHVMVTAFLL--VCGAMTMSWICDTISESGFGQG 318
A L A YS L A + + A +L V G M M W+ + I+ G G G
Sbjct: 130 AAL-----AGYSQLLLLQREGAVAQTEPLAAIAIVLSIVAGTMFMVWLGEQITSYGIGNG 184
Query: 319 SSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
SLII GI+ G + + + L Q G +V + FM + T+ V+ TE R
Sbjct: 185 ISLIIFAGIVAGLPDMIGRGLMASDQFAGLAV--YAFMA------LLTTVLIVIFTEAHR 236
Query: 376 KVKLQYYGFKLASAA--REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS--I 431
++ +QY + S R E +IP +N +GM P++ + L+ P ++AS +
Sbjct: 237 RIPVQYAQTVIRSGKMYRRGG-----ESHIPLRVNSAGMIPLIFASALVMLPGLVASYFM 291
Query: 432 LGSP----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GS FW V I + S+ VY+++Y F +F F
Sbjct: 292 AGSTAEPNFWNSVYTIFSSSASMPGG-LVYWSLYFFMTIIFAFF 334
>gi|419846911|ref|ZP_14370114.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
gi|386412455|gb|EIJ27122.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
Length = 445
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 160/338 (47%), Gaps = 26/338 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-------L 201
++ E+R+++ +I++ RIG FIP PG D + ++ + G+ E L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYTEV-NKCMAKIGGASQENFIGLVNL 64
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 FSGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIG 124
Query: 262 FAILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 125 LAVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKG 184
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 185 IGQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELC 242
Query: 375 -RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 243 QRRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FG 296
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
VK I N + W Y +YA + F F
Sbjct: 297 KSDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFF 332
>gi|410610657|ref|ZP_11321771.1| preprotein translocase subunit SecY [Glaciecola psychrophila 170]
gi|410634578|ref|ZP_11345212.1| preprotein translocase subunit SecY [Glaciecola arctica BSs20135]
gi|410145782|dbj|GAC22079.1| preprotein translocase subunit SecY [Glaciecola arctica BSs20135]
gi|410169793|dbj|GAC35660.1| preprotein translocase subunit SecY [Glaciecola psychrophila 170]
Length = 439
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 25/328 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL I++ R+G ++P+PG D ++ Q + G++ E+ + GA +
Sbjct: 15 SELKSRLLFVLGAIIVFRLGSYVPIPGIDAAVLAQLFEQ-QKGTIVEMFNMFSGGALERA 73
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q++ H+ P +++L+KEG G KI Y + +L A +AV +
Sbjct: 74 SVLALGIMPYITASIIIQLMSHMHPPMMELKKEGEAGRRKISQYTRYFTLVLASFQAVGI 133
Query: 271 ACYSLPYSIYA-ASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A +LP I + TA++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 134 AT-NLPNLIQGLVINPGFGFYFTAWISLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 192
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
+G L + Q + M L+GV I VT + V V G R++ + Y A
Sbjct: 193 SGLPSALGNVAEQARQGELNLLFLM--LVGVIIIAVTYFVVFVERGQRRIVVNY-----A 245
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFW-QHVKEI 443
+ ++P +N +G+ P + + ++ FP +A+ G S W Q V
Sbjct: 246 KRQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIANWFGQNESLSWLQDVALQ 305
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P +P +Y +YA + F F
Sbjct: 306 LSP-----GQP-LYVMLYAATIIFFCFF 327
>gi|417933004|ref|ZP_12576338.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182B-JCVI]
gi|340772923|gb|EGR95418.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182B-JCVI]
Length = 439
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 44/351 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVSNINTCVTQASSGSSAGLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++L +L+A + ++ S SV V+V + G + W+ + +
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELV 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++ G G G S++I I + ++L+ K+ G + W F+ L+ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWAIKVARNGAGQAHAW--FIFSLVIAIGLAVMAAV 238
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF 471
A+ P+TS A W+ Y+T +Y FL IF
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIVYFLLIIF 329
>gi|302543341|ref|ZP_07295683.1| preprotein translocase, SecY subunit [Streptomyces hygroscopicus
ATCC 53653]
gi|302460959|gb|EFL24052.1| preprotein translocase, SecY subunit [Streptomyces himastatinicus
ATCC 53653]
Length = 437
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G +P+PG D + + Q + G G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLFRLGQHVPIPGIDYKNV-QTCMDLAKGQQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQTGQAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 308
+++ AIL+ + + S++ + S+ V + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGSLFQSCPVGSQIVRDDSIFTTAVMVITMTAGTALIMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 366
+++ G G G S+++ V I G+ ++ K +++G W F L + +V +
Sbjct: 180 LVTDRGIGNGMSILMFVSIAAGFPSAMWSIKQQGKIMGG---WLEFGLVIACGLAMVAL- 235
Query: 367 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P+
Sbjct: 236 VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPMKVNQAGVIPVIFASSLLYIPA 290
Query: 427 IL 428
++
Sbjct: 291 LI 292
>gi|441516702|ref|ZP_20998448.1| preprotein translocase SecY subunit [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441456408|dbj|GAC56409.1| preprotein translocase SecY subunit [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 444
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 160/356 (44%), Gaps = 46/356 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------ 196
+L++ +F ++R+++ ++V+ R G +P PG D R I + G
Sbjct: 1 MLSSLVATFRTPDLRKKIVFVLGILVLYRFGATLPSPGVDFRAINDCVDAAARGDSAQIY 60
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
S+ + GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y
Sbjct: 61 SLINMFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHS-------------VKHVMVTAFLLVCGAMTM 303
++++ A+L++ + + S++ S + + + + ++ GA +
Sbjct: 121 YLTVALALLQSTGIVALAASGSLFPTSGAEGCDPQAIVRSDGIMELSLMVLVMTAGATLV 180
Query: 304 SWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV 363
W + I+E G G G SL+I GI +L G + GL+ + ++
Sbjct: 181 MWFGELITERGVGNGMSLLIFAGIAARLPAEGRTILQTRGG-------LVFGLVCLAVLI 233
Query: 364 TMWAVV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 422
+ AVV + +G R+V +QY + S YIP +N +G+ PV+ + LL
Sbjct: 234 ILLAVVFIEQGQRRVPVQYAKRMVGRKMYGGS-----STYIPIKVNTAGVIPVIFASSLL 288
Query: 423 AFPSILASIL-------GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P ++ SI G W ++NP + WV+ +Y + F F
Sbjct: 289 YIPQLIISITQGSADVSGWQLWIQ-DNLVNPGS------WVHIAVYFLLIIFFTYF 337
>gi|257426393|ref|ZP_05602795.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 65-1322]
gi|418650785|ref|ZP_13212802.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-91]
gi|257276024|gb|EEV07475.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 65-1322]
gi|375027441|gb|EHS20804.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-91]
Length = 336
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|288574682|ref|ZP_06393039.1| preprotein translocase, SecY subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570423|gb|EFC91980.1| preprotein translocase, SecY subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 410
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 22/310 (7%)
Query: 166 LIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQLGISPQIV 222
++ + R+G IP PG D + F G V D GA + S F LG++P I
Sbjct: 3 MLFVFRLGAHIPTPGIDSAAMAH---LFEGGGVLGFLDMFAGGALRRFSIFALGVAPYIN 59
Query: 223 ASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 282
ASI+MQ+L + P+L +++KEG +G +KI +LGFA ++AV + + +++
Sbjct: 60 ASIVMQLLVVVFPALEKMQKEGPEGQKKIIQITRLSTLGFAAIQAVGMVFWLQRVGVFSG 119
Query: 283 SHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQ 341
MVTA L ++ GA+ + W+ + IS+ G G G SL+I GI+ E + +
Sbjct: 120 G---ALGMVTAILTIIAGAIAVMWLGEEISDHGIGNGISLLIFAGIVARIPEATIRTWNM 176
Query: 342 LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEP 401
L + +L L+ V +V +V+ EG R++ +QY A +
Sbjct: 177 LHLGELHALIVLLALM-VMIVVVAGCIVLQEGQRRLPVQY-----AKKVVGNKVYGGQST 230
Query: 402 YIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIY 461
+IP +N G+ P++ + +L FP + ++ +L P + W+Y +Y
Sbjct: 231 FIPLKVNQGGVMPIIFASSILIFPYTVLKFFSGDIAIKMQNMLAPGS------WLYSVLY 284
Query: 462 AFFVFLFNIF 471
+ F F
Sbjct: 285 VTLILFFAYF 294
>gi|339499042|ref|YP_004697077.1| preprotein translocase subunit SecY [Spirochaeta caldaria DSM 7334]
gi|338833391|gb|AEJ18569.1| preprotein translocase, SecY subunit [Spirochaeta caldaria DSM
7334]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 150/296 (50%), Gaps = 26/296 (8%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---VDELGDF--G 205
F E+R R+ T +++++ R+G +P+PG + + +LS + VD L F G
Sbjct: 10 FRVKELRERVIFTMLMLIVFRLGAVLPIPGINVNALKAYFLSQQNTGNAIVDYLDFFAGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A S F LGI P I SI+MQ+ I PSL +L +E G +KI+SY ++ ++
Sbjct: 70 AFTNFSVFMLGIMPYISMSIIMQLFLIIFPSLKKLSEEE-GGRKKIQSYQRMGTVVICLI 128
Query: 266 E--AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ AV V +P +I + S + ++ + G M + WI + I++ G G G SL+I
Sbjct: 129 QSYAVTVWADRIPNAITISKLS--YTLIAMITVTTGTMFLMWIGEQITKRGIGNGISLLI 186
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY- 381
GI+ ++++++++ + P FM+ + +F V V +G RK+ + Y
Sbjct: 187 FAGIVARLPRAVWELVTKVKNRELN--PVFMIVVFVMFIAVVALVVFEQQGQRKIPVNYA 244
Query: 382 ---YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
G K+ A YIPF INPSG+ PV+ + LL FP +AS +G+
Sbjct: 245 KRVVGRKMYGAQNT---------YIPFKINPSGVIPVIFASSLLTFPLQIASGIGA 291
>gi|288904293|ref|YP_003429514.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
UCN34]
gi|306830322|ref|ZP_07463493.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325977272|ref|YP_004286988.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|386336759|ref|YP_006032928.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|288731018|emb|CBI12562.1| preprotein translocase, SecY subunit [Streptococcus gallolyticus
UCN34]
gi|304427569|gb|EFM30670.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325177200|emb|CBZ47244.1| secY [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334279395|dbj|BAK26969.1| preprotein translocase SecY subunit [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 434
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 168/340 (49%), Gaps = 50/340 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFVQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILT---GYTETLYKML------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GI++ T+Y+ S LL S + F+ L+ + + V +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLLSS----YIFVALLIVAVLAIVFFTTFVQQAEY 241
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
K+ +QY KL A S Y+P INP+G+ PV+ + + PS + ++ +
Sbjct: 242 KIPIQYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNG 292
Query: 435 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++ LN +T G +YA + LF+ F
Sbjct: 293 KDIPWLTTLESFLNYQTPSG------MVVYAVLIILFSFF 326
>gi|315633475|ref|ZP_07888765.1| preprotein translocase subunit SecY [Aggregatibacter segnis ATCC
33393]
gi|315477517|gb|EFU68259.1| preprotein translocase subunit SecY [Aggregatibacter segnis ATCC
33393]
Length = 441
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 159/328 (48%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELK 209
KSE+R RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KSELRSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSR 74
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV
Sbjct: 75 ASIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVG 134
Query: 270 VACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
++ LP + + LV G M + W+ + I+E G G G SLII GI
Sbjct: 135 IST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGI 193
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ G + + + Q + + +L + + +VT + V V G R++K++Y A
Sbjct: 194 VAGLPAAVGQTIEQARLGQMHFLVLIL-IAVIVFVVTYFVVFVERGQRRIKIEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N +G+ P + + ++ FP+ L +G + + +
Sbjct: 248 KRQQGRQILGGHTTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P +P +Y +YA + F+ F
Sbjct: 308 LHP-----GQP-LYLIVYATAIIFFSFF 329
>gi|226184477|dbj|BAH32581.1| preprotein translocase SecY subunit [Rhodococcus erythropolis PR4]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 159/339 (46%), Gaps = 43/339 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF-------- 204
++RR++ T L+ + R+G IP PG D + Q D ++ S D G +
Sbjct: 13 DLRRKILFTLGLVALYRVGALIPSPGVDYGRVRQCID----IANSGDSAGIYSLINLFSG 68
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L++S F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AI
Sbjct: 69 GALLQMSIFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAI 128
Query: 265 LEAV-IVACYSLPYSIYA-----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
L++ IVA + + A S+ + + ++ GA + W + I+E G G G
Sbjct: 129 LQSTGIVALAARGQLLQGCDDIIADKSIFGLAIIVLVMTAGAAMVMWFGEVITERGVGNG 188
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKV 377
SL+I GI + +L P + + + ++ + VV V +G R++
Sbjct: 189 MSLLIFAGIASRIPSEGKSILDS-------RGPLVFAFVCLAALLIIAGVVFVEQGQRRI 241
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--- 434
+QY + S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 242 PVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTSASTA 296
Query: 435 ---PFWQHVKE--ILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + ++NP V +Y+ + FF + +
Sbjct: 297 VDPSWWQRLINTYLVNPANPV--YIAIYFGLIVFFTYFY 333
>gi|456389448|gb|EMF54888.1| secY protein [Streptomyces bottropensis ATCC 25435]
Length = 437
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 145/300 (48%), Gaps = 20/300 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF- 204
A +F ++R++L + +IVI RIG IP+PG D ++ D SG + F
Sbjct: 6 ARAFKTPDLRKKLLFSLGIIVIYRIGTHIPIPGVDYTVVQYCIDQTKSNSGLFGLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTSKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
IL+ + + +++++ S+ +V + G + W+ + I++ G
Sbjct: 126 ILQGTGLVATARSGALFSSCPQGSQIVPDQSIFATIVMVVTMTAGTAVVMWLGELITDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+++ + I + +L+ + Q G W ++ V ++ V V +
Sbjct: 186 IGNGMSILMFISIAATFPSSLWAIKEQ--GDLADGWIEFAVVIAVGLVMVALVVFVEQAQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + + + YIP +N +G+ PV+ + LL P+++A G
Sbjct: 244 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVAQFAGG 298
>gi|126724888|ref|ZP_01740731.1| protein translocase subunit SecY [Rhodobacterales bacterium
HTCC2150]
gi|126706052|gb|EBA05142.1| protein translocase subunit SecY [Rhodobacteraceae bacterium
HTCC2150]
Length = 450
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R+R+ T L+++ R+G +IP+PG D + + S SG L F GA ++
Sbjct: 21 TELRQRIVFTLGLLIVYRLGTYIPVPGIDASALREFVESASSGLGGILNMFTGGAIGRMG 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q++ +VP + QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMTAMVPYMEQLKKEGEQGRKKINQYTRYGTVLLATFQAYGLA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL A + + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 A-SLEAGDLAHEPGLYFRIACMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRKVKLQYYGFKL 386
L + + G PF +F IV + AV+ + RK+ +QY ++
Sbjct: 200 PAALAQFFAS--GREGSISPFAT----IFVIVMVIAVIGFVVFMERALRKIHIQYPRRQV 253
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P+ +++ G+
Sbjct: 254 GMKVYDGG-----SSHLPIKVNPAGVIPAIFASSLLLLPTTISTFSGA 296
>gi|334128926|ref|ZP_08502802.1| preprotein translocase subunit SecY [Centipeda periodontii DSM
2778]
gi|333385953|gb|EGK57178.1| preprotein translocase subunit SecY [Centipeda periodontii DSM
2778]
Length = 419
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 152/301 (50%), Gaps = 24/301 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ F E+R+++ T ++ + R+G IP+PG D I Q F G++ L
Sbjct: 1 MLDALGNIFRIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFAQGTLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA K S F + I+P I A+I++Q+L +VP+L Q KEG +GH+K +++
Sbjct: 58 DLFSGGAFSKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ A +A+ S+ + + ++++ A L G + + W+ + I+ +G G G
Sbjct: 118 VALAFFQAI---GMSIGLKSAILNPNPMNILIIAITLTAGTVFLMWLGEQITANGVGNGI 174
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SLII GI+ + + + + + ++ ++ FM G++ + IV + + + G R+V
Sbjct: 175 SLIIFAGIVAALPKNIGTIYAYVKAGTISYFSVFMFGVIALAMIV--FVIHIETGFRRVP 232
Query: 379 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ Y G ++ ++ +IPF +N +G+ P++ + +L FP +A +
Sbjct: 233 ITYAKRLVGGRVGTSGHSS--------HIPFKVNQAGVIPIIFASSVLMFPITVAQFIDV 284
Query: 435 P 435
P
Sbjct: 285 P 285
>gi|332142186|ref|YP_004427924.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Deep ecotype']
gi|407689208|ref|YP_006804381.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410863182|ref|YP_006978416.1| preprotein translocase subunit SecY [Alteromonas macleodii AltDE1]
gi|327552208|gb|AEA98926.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Deep ecotype']
gi|407292588|gb|AFT96900.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410820444|gb|AFV87061.1| preprotein translocase subunit SecY [Alteromonas macleodii AltDE1]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 161/338 (47%), Gaps = 26/338 (7%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L++ A+S SE++ RL IV+ R+G ++P+PG D ++ D G++ E+ +
Sbjct: 6 LDSGAKSGL-SELKARLLFVLGAIVVFRLGSYVPIPGIDPAVL-ADLFEQQKGTIVEMFN 63
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S LGI P I ASI+MQ+L + P +V+L+KEG G KI Y +++L
Sbjct: 64 MFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMVELKKEGEAGRRKISQYTRYLTL 123
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
AI +++ ++ LP I + LV G M + W+ + I+E G G G
Sbjct: 124 VLAIFQSIGIST-GLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNG 182
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 377
S++I GI+ G + + Q + F+L L+G I + VV E G R++
Sbjct: 183 ISILIFAGIVAGLPTAIGQTAEQARQGDINLL-FLL-LIGAIVIALTYLVVFVERGQRRI 240
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---S 434
+ Y A + ++P +N +G+ P + + ++ FP +A G S
Sbjct: 241 VVNY-----AKRQQGRQVFAAQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNES 295
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q V +L+P +P +Y +YA + F F
Sbjct: 296 TAWLQDVALMLSP-----GQP-LYVMLYAAAIIFFCFF 327
>gi|149072026|ref|YP_001293597.1| preprotein translocase subunit SecY [Rhodomonas salina]
gi|134302977|gb|ABO70781.1| preprotein translocase subunit SecY [Rhodomonas salina]
Length = 420
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 166/327 (50%), Gaps = 31/327 (9%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSFVSGSVDELGDF 204
+ I+ R+ +T L+++SR+G FIP+PG D Q +L+ SG G F
Sbjct: 10 REGIQERILLTLGLLILSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSG-----GGF 64
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 263
+ + F LGI P I ASI++Q+ +PSL +L+KE G G +KI +I+LG+A
Sbjct: 65 AS---IGIFALGIVPYINASIIIQLATTSIPSLEKLQKEEGEAGRQKISQITRYIALGWA 121
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++ V+ + PY + + V+ L G+M + W + I+E G G G SL+I
Sbjct: 122 AIQSIGVSFWVRPY---VFNWDAQFVIEMTLALTTGSMLIMWFSEQITEKGIGNGPSLLI 178
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I+ G + L + S +G++ + + L +F I+ + + + EG R++ +
Sbjct: 179 FINIIAGLPK-LIQQKSGSVGTNTQITELFV-LASIFLIMIVGIIFIQEGTRRIPI-ISA 235
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
+L ++ Y+P +N G+ P++ + +L P+ L I+ + F ++ +
Sbjct: 236 RQLGKGQSQNK-----TSYLPLRLNQGGVMPIIFASAILVLPAYLGQIVKNQFLLNILNL 290
Query: 444 LNPETSVGARPWV--YYTIYAFFVFLF 468
L+P TS ++ Y+++ FF + +
Sbjct: 291 LSP-TSGDKNLYLIFYFSLILFFSYFY 316
>gi|147669116|ref|YP_001213934.1| preprotein translocase subunit SecY [Dehalococcoides sp. BAV1]
gi|146270064|gb|ABQ17056.1| protein translocase subunit secY/sec61 alpha [Dehalococcoides sp.
BAV1]
Length = 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 161/344 (46%), Gaps = 34/344 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L ++F ++RRRL +T +++ +R +PLPG D + + + + + +L
Sbjct: 10 LLQAMIDAFSLPDLRRRLLITLGILIAARFIAHVPLPGVDSVALQELFDQNGALGMLDLF 69
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA S LG+ P I ASI+M +L ++P L L KEG G KI + W+++
Sbjct: 70 SGGAMRYFSVAALGVYPYITASIIMTLLTPVIPKLSALSKEGDAGRNKINTITHWLAVPT 129
Query: 263 AILEAVIVACYS--LPYSIYAASHSVKHVMVTAFLL--VCGAMTMSWICDTISESGFGQG 318
A L A YS L A + + A +L V G M M W+ + I+ G G G
Sbjct: 130 AAL-----AGYSQLLLLQREGAVAQTEPLAAIAIVLSIVAGTMFMVWLGEQITSYGIGNG 184
Query: 319 SSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
SLII GI+ G + + + L Q G +V + FM + T+ V+ TE R
Sbjct: 185 ISLIIFAGIVAGLPDMIGRGLMASDQFAGLAV--YAFMA------LLTTVLIVIFTEAHR 236
Query: 376 KVKLQYYGFKLASAA--REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS--I 431
++ +QY + S R E +IP +N +GM P++ + L+ P ++AS +
Sbjct: 237 RIPVQYAQTVIRSGKMYRRGG-----ESHIPLRVNSAGMIPLIFASALVMLPGLVASYFM 291
Query: 432 LGSP----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GS FW V I + S+ VY+++Y F +F F
Sbjct: 292 AGSTAEPNFWNSVYTIFSSTASMPGG-LVYWSLYFFMTIIFAFF 334
>gi|427703087|ref|YP_007046309.1| preprotein translocase subunit SecY [Cyanobium gracile PCC 6307]
gi|427346255|gb|AFY28968.1| preprotein translocase, SecY subunit [Cyanobium gracile PCC 6307]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 156/304 (51%), Gaps = 20/304 (6%)
Query: 175 FIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCH 232
+IP+PG DR QD++ + L F G L F LGI P I ASI++Q++
Sbjct: 43 YIPVPGIDRVAF-QDFIRQGGQLIGFLDIFTGGGLSTLGVFALGILPFINASIIIQLMTA 101
Query: 233 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 291
+P L +L+K EG G K+ +++LG+ IL++++ A Y++ + V+
Sbjct: 102 ALPQLEELQKNEGEAGRRKLAQITRYVALGWGILQSIVFALILRQYALPGLPEWL-FVVQ 160
Query: 292 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 351
T+ LV G+M + WI + I+E G GQG+SL+I + I+ + L + QL S R
Sbjct: 161 TSLALVTGSMVVMWISEVITERGIGQGASLVIFINIVATLPKALGSTI-QLAQSGDRATV 219
Query: 352 FMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASAARE---DSPITEVEPYIPFNI 407
+ +L + +VT+ +++ + EG R++ + SA R+ S + + Y+P +
Sbjct: 220 GGIVVLVLVFLVTIVSIIFLQEGSRRI-------PIVSAKRQVGGASTLASRQSYLPLKL 272
Query: 408 NPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFL 467
N G+ P++ + ++ P +A++ SP+ V LNP +S PW+Y +Y +
Sbjct: 273 NAGGVMPIIFASAVVFLPLTIANLTKSPWLIRVAGYLNPTSST---PWLYALVYFALICG 329
Query: 468 FNIF 471
F F
Sbjct: 330 FAFF 333
>gi|269122561|ref|YP_003310738.1| preprotein translocase subunit SecY [Sebaldella termitidis ATCC
33386]
gi|268616439|gb|ACZ10807.1| preprotein translocase, SecY subunit [Sebaldella termitidis ATCC
33386]
Length = 429
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 148/299 (49%), Gaps = 10/299 (3%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
E+R+R+ T ++ +++R+G I +PG D RL + ++G ++ G + S F
Sbjct: 19 ELRKRVVFTLIMFLVARVGVHIQVPGIDVSRLSSAMQGNSLAGFINTFSGGGFQ-NASMF 77
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IVAC 272
LGI P I +SI+ Q+L +VP L +++KEG EK+ + ++++G AI ++ +
Sbjct: 78 ALGIIPYINSSIIFQLLGVVVPKLEEMQKEGGKEKEKVTQWTRYLTIGVAIAQSFGLTIL 137
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
+Y +VT L+ G + W+ + IS G G G+S++I + I++
Sbjct: 138 LQQQQLVYEPGP--MFTLVTVTLMTGGTAFLMWVAERISLKGIGNGTSMLIFLSIVSRLP 195
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
+Y++ L S ML + +F I+ V++ R++ +QY G R
Sbjct: 196 AEMYQIGKNLSTSGGMGLVLMLITIVLFVILIAVIVLIQLAERRIPIQYVG-----KGRT 250
Query: 393 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 451
+ ++P IN SG+ P++ + L+A PS+L S++ P + L +T VG
Sbjct: 251 GRSSVGQKTFLPLKINMSGVMPIIFASVLMAVPSVLISLVKDPSLNAKLKNLFSQTGVG 309
>gi|354558460|ref|ZP_08977715.1| preprotein translocase, SecY subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353546938|gb|EHC16385.1| preprotein translocase, SecY subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 429
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 35/344 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DEL 201
++++ ++ +EIR ++ T ++ +I RIG IP+P D ++ SGS+ D L
Sbjct: 2 IVDSLKNAWKVAEIRNKIGFTLLMFLIFRIGAHIPIPFMDHSVLSN---MIGSGSIFDFL 58
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----- 254
F G+ + S F L I+P I ASI++Q+L +VP L L KEG G +KI Y
Sbjct: 59 DTFSGGSFRRFSVFALSITPYITASIILQLLTIVVPYLEHLAKEGQYGRKKITQYTRYGT 118
Query: 255 -----IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 309
I L + + A+++ SL + IY ++ A +L G + WI +
Sbjct: 119 VVLGFIQGFGLTYGLRTALVIPSPSLKWPIY---------LLVALILTAGTAFLMWIGER 169
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G SLII GI+ + L + L + ++GL+ + + V
Sbjct: 170 ITEKGIGNGISLIIFAGIVARVPDGLKYIWGLLKVGEINALS-VIGLVIMGAAIIAGVVF 228
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
+ EG R+V++QY A +IP +N SG+ P++ LLAFPS +A
Sbjct: 229 IQEGQRRVQVQY-----AKRVVGRRVYGGQSSHIPLKVNQSGVIPIIFAISLLAFPSTIA 283
Query: 430 SIL--GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + S + Q + +V + P Y IYA + F F
Sbjct: 284 TWMPATSGYVQFINRWFTMNGTVYSIP--YLIIYAMLIIFFTYF 325
>gi|206889576|ref|YP_002249226.1| preprotein translocase subunit SecY [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741514|gb|ACI20571.1| preprotein translocase, SecY subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 435
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 12/299 (4%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R R+ T ++ + RIG IP PG D + + +L G+V D GA K++
Sbjct: 15 ELRARVLFTLAMLAVFRIGAHIPTPGIDGEALSK-FLLERGGAVMGFFDIFTGGALSKVT 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE--AVI 269
F LG+ P I ASI+ Q+L ++PSL +L KEG +G +KI Y + ++ A ++ +
Sbjct: 74 IFALGVMPYISASIIFQLLTVVIPSLQKLAKEGEEGRKKITRYTRYATIVIAAIQGFGIA 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V S+ + ++T L G + W+ + I+E G G G SLII GI+
Sbjct: 134 VGLESMGGGQFIQEPGWSFRIITMITLTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVA 193
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 389
+ ++ + + + + F+L L+ V V + + G R++ +QY A
Sbjct: 194 RFPNAIFYTYNLVRTGELSIF-FVLILIVVMVGVVAGIIFIERGQRRIPIQY-----AKR 247
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
Y+P IN +G+ P + + +L FP+ +A + P+ Q + + ++P +
Sbjct: 248 VVGKKMYGGYTTYLPLKINSAGVIPPIFASSVLMFPATVAGFIAVPWVQALAKQMSPGS 306
>gi|188587684|ref|YP_001919692.1| preprotein translocase subunit SecY [Clostridium botulinum E3 str.
Alaska E43]
gi|251777942|ref|ZP_04820862.1| preprotein translocase, SecY subunit [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188497965|gb|ACD51101.1| preprotein translocase, SecY subunit [Clostridium botulinum E3 str.
Alaska E43]
gi|243082257|gb|EES48147.1| preprotein translocase, SecY subunit [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 37/344 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F SE+R++ F +L+ + R+G IP+PG I +YL +S S L
Sbjct: 1 MLQTLRNAFKVSELRKKFFWIILLVAVFRMGSHIPVPG-----INAEYLKSISQSGGLLS 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S F LG+ P I ASI+MQ+L +P L QL KEG DG +KI++ +
Sbjct: 56 FYDLLSGGAFSRFSIFALGVMPYINASIIMQLLTVAIPQLEQLSKEGEDGRKKIQNATRY 115
Query: 258 ISLGFAILEAVIVACYSLPYSIYA------ASHSVK--HVMVTAFLLVCGAMTMSWICDT 309
+SLG + + L + IYA A+ +K ++V F LV G+ W+ D
Sbjct: 116 VSLGISFI---------LAFGIYATISNSGATAGIKTSEMLVIIFALVVGSTFCMWLGDQ 166
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
++ +G G G+S++I V I++ T+ + + +V + L F + + +V+
Sbjct: 167 LTVNGIGNGTSILIFVNIVSRIPMTMGSIAASKQAGNVS--IIEIALFAAFFVALLASVL 224
Query: 370 -VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ R++ +QY G A + +IP +I S + ++ ++ FP +
Sbjct: 225 YFSLAERRIPVQYAG----KAVGGSKMMRNQTSHIPLSIIGSAVIAIIFAMSVMDFPRTI 280
Query: 429 ASILGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF 471
A+ + + W IL +T V + W+Y +YA F F
Sbjct: 281 ATFVPNKSWAM--WILTNKTCVFNSESWMYIVLYAILTLFFTWF 322
>gi|408828949|ref|ZP_11213839.1| preprotein translocase subunit SecY [Streptomyces somaliensis DSM
40738]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 146/302 (48%), Gaps = 23/302 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 202
A +F ++R++L T +IV+ R+G IP+PG D + Q G+ + LG
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVLYRLGAHIPVPGVDYENVQQCVKQAQQGNNNLLGLMDMF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 66 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQYTRYLTVAL 125
Query: 263 AILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
AIL+ + + ++++ S+ + V + G + W+ + I++
Sbjct: 126 AILQGTGLVATAKSGALFSGCSVADQIVPDQSIFVITVMVITMTAGTALVMWLGELITDR 185
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTE 372
G G G S+++ + I G+ +L+ + G + W F +L F +V + V V +
Sbjct: 186 GVGNGMSILMFISIAAGFPGSLWAIKES--GKLAKGWIEFGTVILIGFVMVAL-VVFVEQ 242
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + + YIP +N +G+ PV+ + LL P ++
Sbjct: 243 AQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPILIVQFA 297
Query: 433 GS 434
G+
Sbjct: 298 GN 299
>gi|227497201|ref|ZP_03927449.1| preprotein translocase SecY subunit [Actinomyces urogenitalis DSM
15434]
gi|226833332|gb|EEH65715.1| preprotein translocase SecY subunit [Actinomyces urogenitalis DSM
15434]
Length = 430
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 21/297 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---G 205
++F ++R++L T ++ + R+G +P PG D + + Q + L + G
Sbjct: 7 QAFRTPDLRKKLLFTLGIMALFRLGSVLPTPGVDMKNVQQCIGESQDAGLLSLINIFSGG 66
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A L+LS F LGI P I ASI++Q+L ++P +L KEG G K+ Y ++++G +L
Sbjct: 67 ALLQLSVFALGIMPYITASIIIQLLRVVIPRFEELHKEGQAGTAKLTEYTRYLTIGLGVL 126
Query: 266 EAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ + + +++ S ++ + + G + W+ + I+E G G G
Sbjct: 127 QSATIVATASSGNLFTGCSVAVIPDSSAVNLGLMIVTMTAGTGLIMWLGELITEKGIGNG 186
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I I+ + L+ +L G+S L +L V + T+ V + + R++
Sbjct: 187 MSLLIFTSIVARMPQNLFSILGGNGGASK-----FLTVLAVILLATVAVVFIEQATRRIP 241
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+QY K R+ T YIP IN +G+ PV+ + +LA P ++A GSP
Sbjct: 242 VQYA--KRMIGRRQYGGSTT---YIPIKINTAGVIPVIFASSILAMPQLIAQ-FGSP 292
>gi|395205568|ref|ZP_10396199.1| preprotein translocase subunit SecY [Propionibacterium humerusii
P08]
gi|422441376|ref|ZP_16518186.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA3]
gi|422472439|ref|ZP_16548927.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA2]
gi|422572128|ref|ZP_16647699.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL044PA1]
gi|313836049|gb|EFS73763.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA2]
gi|314929587|gb|EFS93418.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL044PA1]
gi|314970528|gb|EFT14626.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA3]
gi|328906204|gb|EGG25979.1| preprotein translocase subunit SecY [Propionibacterium humerusii
P08]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 44/351 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVSNINTCVNQASSGSSAGLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++L +L+A + ++ S SV V+V + G + W+ + +
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELV 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++ G G G S++I I + ++L+ K+ G + W F+ ++ V + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWAIKVARNGAGQAHAW--FIFSMVIVIGLAVMAAV 238
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF 471
A+ P+TS A W+ Y+T +Y FL IF
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIAYFLLIIF 329
>gi|392553721|ref|ZP_10300858.1| preprotein translocase subunit SecY [Pseudoalteromonas spongiae
UST010723-006]
Length = 442
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E++RRL I+I R+G F+P+PG D ++ Q + G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLAQ-FFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+MQ++ H+ P+ ++L+KEG G +KI + + +L A +++ +
Sbjct: 75 SVLALGIMPYITASIIMQLMTHMHPTYMELKKEGEQGRKKISQHTRYATLVLATFQSIGI 134
Query: 271 ACYSLP--YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP S + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPNMMSGLVVNPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRW------WPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+ P +L L+ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTAEMARQGDLQPLVLLLIAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|296131856|ref|YP_003639103.1| preprotein translocase subunit SecY [Thermincola potens JR]
gi|296030434|gb|ADG81202.1| preprotein translocase, SecY subunit [Thermincola potens JR]
Length = 422
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 28/288 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
++R+++ T + V+ RIG IP+PG + I Q + G LG F GA
Sbjct: 12 GDLRKKILFTLAMFVVFRIGAHIPVPGINHTAIEQ----LIKGGGSLLGFFDVISGGAFK 67
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILE 266
+ S F + I+P I ASI+MQ+L ++P L QL KEG +G +KI YI + + LGF
Sbjct: 68 RFSIFAMSITPYINASIIMQLLTVVIPKLEQLSKEGEEGRKKITQYIRYGTVVLGF---- 123
Query: 267 AVIVACYSLPYSIYAASH----SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
+ + +++ AA S M+ A L G + W+ + I+E G G G SLI
Sbjct: 124 ---IQSLGMAFTLRAAGALENPSFGSYMIIAITLTAGTAFLMWLGEQITEKGIGNGISLI 180
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 382
I GI+ G LY + + +V +L L+ V +V V V EG R++ +QY
Sbjct: 181 IFAGIVAGIPGGLYNIYEAVRVGTVNPLSVVL-LVIVAALVIAAVVAVNEGQRRIPVQY- 238
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A +IP +N +G+ P++ + +L FP+ +A+
Sbjct: 239 ----AKRVVGRRVYGGQSTHIPLKVNQAGVIPIIFASSILMFPTTIAN 282
>gi|304315960|ref|YP_003851105.1| preprotein translocase subunit SecY [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654119|ref|YP_007297827.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777462|gb|ADL68021.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292308|gb|AGB18130.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 418
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 157/327 (48%), Gaps = 32/327 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFVSGSVDELGDFG 205
++IR+++ T +++++ R+G IP+PG D + ++ Q + +SG G
Sbjct: 12 ADIRKKIIYTVLMLLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDIISG--------G 63
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A++
Sbjct: 64 AFRDFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYMTVVLALI 123
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+A+ ++ + + ++ + L G + W+ + I+E+G G GSSLII
Sbjct: 124 QAI---GMTIGLRGAVINPNFLNLTIIVLTLTAGTSFLMWLGERITENGVGNGSSLIIFA 180
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GIL +Y + Q +G+ + L V ++ + ++++EG R++ +QY
Sbjct: 181 GILARIPNMIYTTI-QYVGAGTANIFGAIAFLIVILVMVVSIILMSEGQRRIPVQY---- 235
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEIL 444
A +IP IN +G+ P++ LL FP +A+ S F+ ++ L
Sbjct: 236 -AKRVVGRKVYGGQSTHIPLRINMAGVIPLIFALSLLQFPQQIATFFPKSAFYAFTEKWL 294
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
G W+Y + + F F
Sbjct: 295 ------GTNGWIYNVLNVLLIIFFTYF 315
>gi|114767221|ref|ZP_01446086.1| preprotein translocase SecY [Pelagibaca bermudensis HTCC2601]
gi|114540631|gb|EAU43702.1| preprotein translocase SecY [Roseovarius sp. HTCC2601]
Length = 447
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 145/289 (50%), Gaps = 29/289 (10%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 210
+++R R+ T L+++ R+G FIP+PG D + +D++ G + + GA ++
Sbjct: 14 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGGAL-RDFMEQAGQGIGGMVSMFTGGALGRM 72
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A+ +A
Sbjct: 73 GIFALGIMPYISASIIVQLLAAMVPALEQLKKEGEQGRKKINQYTRYGTVLLALFQA--- 129
Query: 271 ACYSLPYSIYAA--SHSVKHVMVTAFL--LVCGAMTMSWICDTISESGFGQGSSLIICVG 326
Y L S+ A +H A + LV G M + W+ + I+ G G G SLII VG
Sbjct: 130 --YGLAVSLEAGDLAHEAGWYFRAAVVITLVGGTMFLMWLGEQITARGVGNGISLIIFVG 187
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY---- 381
I+ L + + G S P ++ + V I + VV E RK+ +QY
Sbjct: 188 IVAEIPAALAQFFAS--GRSGAMSPAIIVGVIVMVIAVIMFVVFMERALRKITIQYPRRQ 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G K+ A + ++P +NP+G+ P + + LL P+ +A+
Sbjct: 246 VGMKMTEAQ---------QSHLPVKVNPAGVIPAIFASSLLLLPTTIAT 285
>gi|328955893|ref|YP_004373226.1| protein translocase subunit secY/sec61 alpha [Coriobacterium
glomerans PW2]
gi|328456217|gb|AEB07411.1| protein translocase subunit secY/sec61 alpha [Coriobacterium
glomerans PW2]
Length = 427
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 25/337 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL---SFVSGSVD 199
+L +F ++R ++ TA ++V+ R G +P+PG + + + S SG++
Sbjct: 1 MLTGLKNAFGIKDLRSKILFTAGMLVVYRFGAHLPVPGVPFQGMMNLFGGNGSVASGAMA 60
Query: 200 ELGDF-GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
L F G LK +S F LGI P I +SI++Q+L +VPSL +L +EG G KI Y +
Sbjct: 61 LLNLFSGGALKYVSVFSLGIMPYITSSIILQLLQSVVPSLHELSREGEVGQTKITQYSRY 120
Query: 258 ISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
++LG A+L ++ + Y + ++ A ++ +MV LV GAM + WI + I++
Sbjct: 121 LTLGLAVLNSIGYLFLFKSYGVSFNGAGAPEAIFDIMVVG-TLVAGAMLIMWIGELITQR 179
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SLII I+ G + + S L + + +L V ++ V + G
Sbjct: 180 GIGNGMSLIIFANIMAGLPQAIVSSSSAGLKGIIVTIVVFVVILLVIPLI----VFIERG 235
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 432
R++ +QY A + Y+P +N +G+ P++ + LL FP+ +A
Sbjct: 236 QRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVVPIIFASALLYFPAQIAVFFP 290
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIY-AFFVFLF 468
G F Q L S G WV ++ FF + +
Sbjct: 291 GIDFIQTAAGAL----SAGWLNWVLNVVFIVFFAYFY 323
>gi|289550163|ref|YP_003471067.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
HKU09-01]
gi|315659207|ref|ZP_07912071.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
M23590]
gi|385783738|ref|YP_005759911.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
N920143]
gi|418415058|ref|ZP_12988265.1| preprotein translocase subunit secY [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635872|ref|ZP_13198230.1| preprotein translocase, SecY subunit [Staphylococcus lugdunensis
VCU139]
gi|289179695|gb|ADC86940.1| Preprotein translocase secY subunit [Staphylococcus lugdunensis
HKU09-01]
gi|315495632|gb|EFU83963.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
M23590]
gi|339893994|emb|CCB53241.1| preprotein translocase SecY subunit [Staphylococcus lugdunensis
N920143]
gi|374841357|gb|EHS04830.1| preprotein translocase, SecY subunit [Staphylococcus lugdunensis
VCU139]
gi|410875831|gb|EKS23746.1| preprotein translocase subunit secY [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 21/328 (6%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRR-LIPQDYLSFVSGSVDELGDFGAE 207
SFF + E+R ++F T +++I +IG +IP PG + Q V+ ++ G GA
Sbjct: 7 SFFTTKEVRNKIFFTLAMLIIFKIGTYIPAPGVNPEPFAHQGSDQGVAALLNTFGG-GAL 65
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +GI P I ASI+MQ+L IVP + K+G G K+ + + ++ A ++
Sbjct: 66 KNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEVGKRKLSNVTRYFAIILAFVQ 125
Query: 267 AVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ +A Y + SV ++ A +L G + W+ D I++ G G G S+II
Sbjct: 126 SIGMAFQFNNYLGGKLVINQSVMSYLLIAIVLTTGTAFLIWLGDQITQFGVGNGISIIIF 185
Query: 325 VGILTGYTETLYKMLSQ-LLGS--SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
GIL+ ++ + Q +G+ + W ++GL+ ++T+ A+ V E RK+ +QY
Sbjct: 186 AGILSTLPSSIIQFAQQAFVGNDDTTLAWLKVIGLVVGLILLTIGAIYVLEAKRKIPIQY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 440
K SA R S T Y+P +N +G+ PV+ P L W Q +
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQTI 299
Query: 441 KEILNPETSVGARPWVYYTI-----YAF 463
+ NP + G +V I YAF
Sbjct: 300 SQTANPSNTYGMIVYVVLIIAFTYFYAF 327
>gi|302876514|ref|YP_003845147.1| preprotein translocase subunit SecY [Clostridium cellulovorans
743B]
gi|307687186|ref|ZP_07629632.1| preprotein translocase subunit SecY [Clostridium cellulovorans
743B]
gi|302579371|gb|ADL53383.1| preprotein translocase, SecY subunit [Clostridium cellulovorans
743B]
Length = 427
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 147/292 (50%), Gaps = 39/292 (13%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI-------PQDYLSFVSGSVDELGDFGAE 207
+IR ++ T +++V+ RIG +IP+PG ++ + + L F +L + GA
Sbjct: 13 DIRGKIIFTLLMLVVFRIGNYIPVPGVNKDALMKVMDTNSNNLLGFY-----DLMNGGAL 67
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+ S F LG+ P I SI+MQ+L +P L L KEG +G +KI+ Y +IS+ FA++++
Sbjct: 68 KQSSIFALGVMPYINTSIIMQLLTVAIPHLENLSKEGEEGRKKIQKYTKYISVVFAVIQS 127
Query: 268 VIVACYSLPYSIYAA--------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
Y IYA +S +V + L G++ + W+ D I+ GFG G
Sbjct: 128 ---------YGIYAIMTQLGAIDDYSKFNVAMIMLTLTAGSVFLVWLGDQITVKGFGNGV 178
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV-TEGCRKVK 378
SLII GI++ +++ ++ SQ+ V P + +LG I + +V+V T R++
Sbjct: 179 SLIIAFGIISRVPDSVLRINSQVTNEQVT--PLEVIILGAILIALLISVIVMTLAERRIP 236
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+QY A++ + + +PFN+ S + ++ + P+ + +
Sbjct: 237 IQY-------ASKANGRHFKQNSNLPFNLTASVVISIIFAMSFMRLPATIGN 281
>gi|254476973|ref|ZP_05090359.1| preprotein translocase, SecY subunit [Ruegeria sp. R11]
gi|214031216|gb|EEB72051.1| preprotein translocase, SecY subunit [Ruegeria sp. R11]
Length = 407
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 139/279 (49%), Gaps = 19/279 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++R R+ T L+++ R+G +IP+PG D + Q F++ + +G GA
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTYIPVPGIDADALRQ----FMAQAGQGIGGMVSMFTGGAL 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L +VPSL QL+KEG G +KI Y + ++ A ++
Sbjct: 77 GRMGIFALGIMPYISASIIVQLLTSMVPSLEQLKKEGEQGRKKINQYTRYGTVLLATAQS 136
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A SL A + + LV G M + W+ + I++ G G G SLII VGI
Sbjct: 137 YGLAV-SLESGDLATDPGLYFRLACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGI 195
Query: 328 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ + + L+ G S P ++ ++ + + M+ V + RK+ +QY ++
Sbjct: 196 IAEVPAAIAQFLAS--GRSGAISPAVIIAVIVMMVAIIMFVVFMERALRKIHIQYPRRQV 253
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+ ++P +NP+G+ P + + LL P
Sbjct: 254 GMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLP 287
>gi|418425394|ref|ZP_12998486.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS1]
gi|387716957|gb|EIK04994.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS1]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|449524114|ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 546
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 32/343 (9%)
Query: 120 NETFRSKPKMYKNRFLNFIRLSSVLNNAA---ESFFKSEIRRRLFVTAVLIVISRIGYFI 176
+TF S K++ + L++ + +++ FFK + + + +SR+G +I
Sbjct: 94 GQTFNSASSTKKDKSPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYI 153
Query: 177 PLPGFDRRL----IPQDYL-----SFVSGSVDELGDFGAELKLSFFQLGISPQIVASILM 227
PL G +R + Q+ L SF G + LG LGI P I A I+
Sbjct: 154 PLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLG---------ICSLGIVPFINAQIVF 204
Query: 228 QVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSV 286
Q+L I P L L+K EG G +KI Y + S+GFAI++A+ + PY S
Sbjct: 205 QLLAQIYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPY---VNDFST 261
Query: 287 KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSS 346
+ V+ + LL G++ ++I + I++ G G+SL+I I++ + + +Q
Sbjct: 262 EWVLSSVTLLTLGSVVTTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTTAQAFQDG 321
Query: 347 VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFN 406
+ ++ ++ F ++ + V V E RK+ L Y AS + Y+PF
Sbjct: 322 --NYVGLVAIIISFFLLVLGIVYVQEAERKIPLNY-----ASRYTSRGGGLQKSAYLPFK 374
Query: 407 INPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 449
+N SG+ P++ +T LA P LA G + LNP S
Sbjct: 375 VNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALALNPGGS 417
>gi|390952400|ref|YP_006416159.1| protein translocase subunit secY/sec61 alpha [Thiocystis violascens
DSM 198]
gi|390428969|gb|AFL76034.1| protein translocase subunit secY/sec61 alpha [Thiocystis violascens
DSM 198]
Length = 450
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 16/325 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E++RRL +++ RIG F+P+PG + + + +D F GA + S
Sbjct: 19 TELKRRLLFLLGALLVYRIGTFVPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERAS 78
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LG+ P I ASI++Q++ +VP L QL+KEG G KI Y + ++ A +A+ ++
Sbjct: 79 LFALGVMPYISASIIIQLMTSVVPQLEQLKKEGESGRRKITQYTRYGTVFLATFQAIGIS 138
Query: 272 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+L S V H V A LV G M + W+ + I+E G G G S+II G
Sbjct: 139 M-ALQGQTAGGSALVVHGGIGFVFTAAVSLVTGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G L L +L + +L L + VT + V V G R++ + Y
Sbjct: 198 IVAGLPAALGGTL-ELARTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNY----- 251
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A + + ++P +N +G+ P + + +L FP L G+ ++++ I N
Sbjct: 252 ARRQQGRKMMQAQSTHLPLKLNMAGVIPPIFASSILLFPGTLGQFFGAN--ENLRWIANI 309
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
+ + +Y Y + F F
Sbjct: 310 TSKLAPGEPLYVVFYTVAIVFFCFF 334
>gi|331091647|ref|ZP_08340481.1| preprotein translocase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403404|gb|EGG82963.1| preprotein translocase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 438
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 148/290 (51%), Gaps = 10/290 (3%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
+F ++R+R+F T +++++ RIG +P PG D I + S + + F G+
Sbjct: 7 RAFQIDDVRKRIFYTFLMLIVVRIGSILPTPGVDPTYIQNFFKSQTGEAFNFFSAFTGGS 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI S ++++ A++E
Sbjct: 67 LERMSIFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIASITRYVTVILALVE 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ +A S ++ +V V L G+ + W+ + I+E G G G S+++ +
Sbjct: 127 STAMAV-GFGRSGLLVKYNFVNVAVAVLTLTAGSAFLMWVGERITEKGIGNGISIVLLIN 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
I++ + ++ + + GL L + +V ++ +V+ +G RK+ +QY
Sbjct: 186 IISRMPSDFMTLYTKFMKGKSLAKAGLAGLIILAILLVVVIFVIVLQDGQRKISVQY--- 242
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + + +IP +N +G+ PV+ + L+ P ++A LG
Sbjct: 243 --SQKVQGRKSVGGQTTFIPLKVNTAGVVPVIFASSLMQTPVVIAGFLGK 290
>gi|84494766|ref|ZP_00993885.1| preprotein translocase SecY [Janibacter sp. HTCC2649]
gi|84384259|gb|EAQ00139.1| preprotein translocase SecY [Janibacter sp. HTCC2649]
Length = 438
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 34/348 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++RR++ T +I + R+G +P PG LI Q + D LG
Sbjct: 1 MLTAFGRAFKTPDLRRKILFTLGIIALYRLGAQVPTPGVSYSLI-QACQKGAGDANDLLG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y +
Sbjct: 60 LANLFSGGALLQLSIFALGIMPYITASIIIQLLTVVIPKFEALKKEGQAGQTKMTQYTRY 119
Query: 258 ISLGFAILEAVIVACYSL-PYSIYA--------ASHSVKHVMVTAFLLVCGAMTMSWICD 308
+++ A+L++ ++ P ++A S+ +++ + G + W+ +
Sbjct: 120 LTIALAVLQSATFITFAQNPSQLFANPACTNILTDDSIVTILIMVLTMTAGTGLVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
+++ G G G S++I I + L+ + + RW F+ +L F I+ + V
Sbjct: 180 LVTDHGVGNGMSIMIFTSIAASFPGALWAIQQK----EGRWDIFIGIILMGFVIIAL-VV 234
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + YIP +N +G+ PV+ + LLA P++L
Sbjct: 235 FVEQSQRRIPVQYAKRMVGRRVYGGT-----STYIPLKVNMAGVIPVIFASSLLALPTLL 289
Query: 429 ASI-----LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A SP W + G W Y Y + F F
Sbjct: 290 AQFNRKADGTSPGWVDWID----SNYAGGDTWAYGATYTALILFFTFF 333
>gi|262048497|ref|ZP_06021381.1| preprotein translocase SecY [Staphylococcus aureus D30]
gi|259163355|gb|EEW47913.1| preprotein translocase SecY [Staphylococcus aureus D30]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|239618245|ref|YP_002941567.1| preprotein translocase subunit SecY [Kosmotoga olearia TBF 19.5.1]
gi|239507076|gb|ACR80563.1| preprotein translocase, SecY subunit [Kosmotoga olearia TBF 19.5.1]
Length = 428
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 163/343 (47%), Gaps = 45/343 (13%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-SVDELGD 203
NA ++ FK E+R R+F T + I R+G +IP+PG + + S+ SG S G
Sbjct: 3 NALKNAFKIPELRDRIFFTLFALAIFRLGIYIPIPGIN----INAWASYFSGLSEGAAGG 58
Query: 204 F---------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
F GA S F L ++P I ASI++Q+L +VPSL ++ KEG +G +K
Sbjct: 59 FIGFFDVFTGGALKNFSLFALSVTPYINASIMLQLLASVVPSLKEMLKEGEEGRKKYARL 118
Query: 255 IWWISLGFAILEAVIVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
+++ L+A ++ S + A + V++ L+ G M + W+ + I+E
Sbjct: 119 TRRLTVFLGSLQAFLLTLALSNNQGLIATPNRAIFVLLGTVSLLGGTMFLLWLGERITEK 178
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S++I GI+ Y + + + L + ++W +L + V T+V + + V G
Sbjct: 179 GIGNGISVLIFAGIVARYPQYIAQAAVSL--TPLQW--IVLIAIAVLTVVAV--IYVQMG 232
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++++QY A V +IP +N G+ P++ ++ P +++S+L
Sbjct: 233 ERRIEIQY-----ARRVSGRRVFGGVSTHIPIKVNQGGVIPIIFAAAIMTLPQMISSVL- 286
Query: 434 SPFWQHVKEILNPETSVGARPW-----VYYTIYAFFVFLFNIF 471
PE ++ R + +Y T+Y VF F F
Sbjct: 287 ------------PEGNLLGRLFAYSSPLYLTLYGLLVFFFTYF 317
>gi|384862874|ref|YP_005745594.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|302752103|gb|ADL66280.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 425
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 2 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 54
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 55 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 114
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 115 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 174
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 175 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 233
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 234 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 287
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 288 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 319
>gi|282849884|ref|ZP_06259267.1| preprotein translocase, SecY subunit [Veillonella parvula ATCC
17745]
gi|294792814|ref|ZP_06757961.1| preprotein translocase, SecY subunit [Veillonella sp. 6_1_27]
gi|294794568|ref|ZP_06759704.1| preprotein translocase, SecY subunit [Veillonella sp. 3_1_44]
gi|417000184|ref|ZP_11940505.1| preprotein translocase, SecY subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|282580321|gb|EFB85721.1| preprotein translocase, SecY subunit [Veillonella parvula ATCC
17745]
gi|294454898|gb|EFG23271.1| preprotein translocase, SecY subunit [Veillonella sp. 3_1_44]
gi|294456713|gb|EFG25076.1| preprotein translocase, SecY subunit [Veillonella sp. 6_1_27]
gi|333976265|gb|EGL77135.1| preprotein translocase, SecY subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 420
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 25/335 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA K S F + I+P I ASI+MQ+L +VP K+G DG +KI + +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ ++A +A ++L + ++ V V A +L G + WI + I+ G G G
Sbjct: 118 VVLGFVQAAGMA-FALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGI 176
Query: 320 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
SLII GI L ET+Y+ + G+ + F+ ++ + I + V VT+G R+
Sbjct: 177 SLIIFAGIVARLPDGLETIYQYIQN--GTINMFQAFLFAVIALAMIAVV--VAVTQGQRR 232
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A ++P +N +G+ P++ + +L FP +A + + F
Sbjct: 233 IPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEF 287
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++ T + +YA +F+F F
Sbjct: 288 VHKAADLFTWGTPLQT------ALYAILIFIFTYF 316
>gi|116334249|ref|YP_795776.1| preprotein translocase subunit SecY [Lactobacillus brevis ATCC 367]
gi|116099596|gb|ABJ64745.1| protein translocase subunit secY/sec61 alpha [Lactobacillus brevis
ATCC 367]
Length = 436
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 173/344 (50%), Gaps = 33/344 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ +F +IR ++ T +++++ R+G +I +PG + + + Q S SG V L
Sbjct: 1 MLSSLKNAFKIKDIRNKILFTLLVLIVFRLGTYITVPGINAKAL-QSVAS--SGLVSILD 57
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ +++
Sbjct: 58 TFSGGGLSNYSIFAMGVSPYITAQIVIQLLQMDIVPRFVEWSKQGDVGRRKLNQATRYLA 117
Query: 260 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A ++++ I A +S S+ + SV+ + +L G M +W+ D I++ G G
Sbjct: 118 IALAFVQSIGITAGFSALSSLKLVQNPSVETYLSIGLILTGGTMLTTWMGDMITDRGLGN 177
Query: 318 GSSLIICVGILTGYTETLYKMLSQLL--GSSVRWWP---FMLGLLGVFTIVTMWAVVVTE 372
G S+II GI+ +++Y++ SS WW F+LGL+ + I+ + V +
Sbjct: 178 GISMIIFAGIIARTPKSVYQLYQTYFVDVSSSGWWKSGLFILGLIVLVLIIVTFVTWVQQ 237
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASI 431
R+V +QY + S + + S Y+P +N +G+ PV+ + +A P +IL +
Sbjct: 238 AERRVPIQYT--RRVSGSPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILMAF 288
Query: 432 LGS----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++Q + ++ N +T GA +Y + +F F
Sbjct: 289 QNTHSQDAWYQTLTDVFNMQTLDGA------ILYTVLIVVFTFF 326
>gi|146328808|ref|YP_001210131.1| preprotein translocase subunit SecY [Dichelobacter nodosus
VCS1703A]
gi|146232278|gb|ABQ13256.1| preprotein translocase, SecY subunit [Dichelobacter nodosus
VCS1703A]
Length = 442
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 162/331 (48%), Gaps = 33/331 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+ R+ + ++I RIG IP+PG + I +D GS+ +L + GA S
Sbjct: 11 ELSSRIRFLVISLIIYRIGVHIPVPGVNLDRI-RDMFDSGQGSIFQLFNMFSGGALSNAS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
LG++P I ASI+MQ+L H++P+L LR+EG G +KI Y + +L AI++
Sbjct: 70 LLALGVAPYISASIVMQLLTHMLPALKDLRQEGSAGQKKITQYTRYFTLFLAIMQG---- 125
Query: 272 CYSLPYSIYAASHSVKH----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+++ ++ AA ++ ++ L GA+ M W+ + I+E G G G S++I GI
Sbjct: 126 -FAISRTVMAAGMTISAGSGFLLTATIGLTAGALFMMWLGEQITERGIGNGISMLIFGGI 184
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV--VTEGCRKVKLQYYGFK 385
+ + +Q + + F L LLG+ IV+++A++ V R++K+ Y
Sbjct: 185 AVNMPSGILGLFNQAKIGEIGYGRFFL-LLGI--IVSLFALIVYVERAQRRIKIHY---- 237
Query: 386 LASAAREDSPITEVEP--YIPFNINPSGMQPVLTTTY---LLAFPSILASILGSPFWQHV 440
A R+ + + Y+P IN +G+ P + + LL LAS L +++
Sbjct: 238 ---AKRQQFGTSAMGERFYLPLKINMAGVIPAIFASAIITLLVSGLTLASSLPGAAGRYL 294
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L GA W+Y + + LF+ F
Sbjct: 295 SD-LAAGFHQGA--WLYIATFVLLIILFSFF 322
>gi|408529909|emb|CCK28083.1| Preprotein translocase subunit secY [Streptomyces davawensis JCM
4913]
Length = 437
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 27/344 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 200
+L A +F ++R++L T +IV+ R+G IP+PG D + Q D + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYTSVQQCVDEAAGNQGLFGL 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 309
++ AIL+ + + ++++ S+ + + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFSGCTVAGQIVPDRSIFVTITMVITMTAGTAVVMWLGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + +Q G+ W F +L F +V + V
Sbjct: 181 ITDRGVGNGMSILMFISIAATFPSALWAIKTQ--GTLADGWIEFSTVMLVGFVMVGL-VV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 429 ASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A G+ W K + G P +Y T+Y + F F
Sbjct: 293 AQFSDGTSSW---KTWIEANLVTGEHP-IYITMYFLLIVFFAFF 332
>gi|255038109|ref|YP_003088730.1| preprotein translocase subunit SecY [Dyadobacter fermentans DSM
18053]
gi|254950865|gb|ACT95565.1| preprotein translocase, SecY subunit [Dyadobacter fermentans DSM
18053]
Length = 437
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 22/325 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 208
F E+R R+ T + I I R+G ++ LPG + P +G + L F GA
Sbjct: 12 FAIEELRTRILNTLLFITIFRLGSYVALPGVE----PDQMNVSSAGLLGLLDTFLGGAFS 67
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
K S F LGI P I ASI +Q+L +P +++KEG G +K+ +++ +++
Sbjct: 68 KASIFALGIMPYISASIAIQLLTMALPYFQKMQKEGESGRKKLNQITRVLTIVVTLVQGT 127
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++P S S+ + + F+L G M W+ + I++ G G G S++I +GI+
Sbjct: 128 AYLNTTVPDEALLVSRSM-FTISSVFVLTAGTMFCMWLGERITDKGIGNGISMLIMIGIV 186
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + +YK S + F+L ++ ++ ++ M AV++T+ R++ +QY A
Sbjct: 187 SRFPGAIYKEFVSR--GSGQILLFVLEIVALYFVI-MGAVMLTQAVRRIPIQY-----AK 238
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKEILNP 446
+ + Y+P +N +G+ P++ L+ PS+ AS S F +V I
Sbjct: 239 QVVGNRVMGGQRQYLPLKLNAAGVMPIIFAQALMFIPSLGASYFAEKSDFASNVATIFAN 298
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
T+ W Y ++A + +F F
Sbjct: 299 YTT-----WQYNLLFAVLIIVFTFF 318
>gi|418455628|ref|ZP_13026876.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418458504|ref|ZP_13029692.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11b]
gi|387742523|gb|EIK29336.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387743730|gb|EIK30515.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11b]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGIYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|350570674|ref|ZP_08939023.1| preprotein translocase subunit SecY [Neisseria wadsworthii 9715]
gi|349795338|gb|EGZ49139.1| preprotein translocase subunit SecY [Neisseria wadsworthii 9715]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 32/329 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
++++ RL ++I RIG IP+PG D ++ + Y + +G + L F G+ + S
Sbjct: 14 NDLKNRLLFLLGALIIYRIGTHIPVPGVDAAILAKAYQNQSAGILGMLNMFSGGSLERFS 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI+MQ+ I+PSL L+KEG G I Y ++ A L+++ VA
Sbjct: 74 IFAIGIMPYISASIVMQLASEILPSLKSLKKEGDAGRRVITKYTRIGTVLLATLQSIGVA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAF--------LLVCGAMTMSWICDTISESGFGQGSSLII 323
SL YS V+V+ F LV G M + W+ + ++E G G G SLII
Sbjct: 134 --SLVYS------QENLVIVSKFEFYISAIVCLVGGTMFLMWLGEQMTERGIGNGISLII 185
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI G + ++L+ L S + LGV +V + VV E RKV + Y
Sbjct: 186 TAGIAAGIPSGIKQLLTLLNNDSTGVLQVIAIGLGVIFLV--YIVVCFESALRKVPIHY- 242
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
A R+ I ++PF +N SG+ P + + L+ FP+ + S LG+ Q+
Sbjct: 243 ------AKRQ--VIGGQNTHMPFKLNMSGVIPPIFASSLIMFPATIGSWLGNN--QNETW 292
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + +G +Y +++F + F F
Sbjct: 293 LTQLVSMLGHGQTLYLLLFSFLIIFFCYF 321
>gi|303230112|ref|ZP_07316881.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-134-V-Col7a]
gi|303231271|ref|ZP_07318009.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302514178|gb|EFL56182.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302515173|gb|EFL57146.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-134-V-Col7a]
Length = 420
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 161/341 (47%), Gaps = 37/341 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW-- 257
D GA K S F + I+P I ASI+MQ+L +VP K+G +G +KI +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQAVVPQFEAWSKDGEEGRKKIAKVTRYGT 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKH----VMVTAFLLVCGAMTMSWICDTISES 313
+ LGF V + + +++ A S V + V V A +L G + WI + I+
Sbjct: 118 VVLGF-------VQAFGMAFALRANSALVNNDILSVFVVAIILTAGTCLLMWIGEQITAY 170
Query: 314 GFGQGSSLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
G G G SLII GI L +T+Y+ + G+ + F+ ++ + I + V V
Sbjct: 171 GIGNGISLIIFAGIVARLPDGLQTIYQYIQT--GTINMFQAFLFAVIAIAMIAVV--VAV 226
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
T+G R++ +QY A ++P +N +G+ P++ + +L FP +A
Sbjct: 227 TQGQRRIPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQ 281
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + F + ++ T + +YA +F+F F
Sbjct: 282 FIENDFVHKIADLFTWGTPLQT------ALYAILIFIFTYF 316
>gi|160872417|ref|ZP_02062549.1| preprotein translocase, SecY subunit [Rickettsiella grylli]
gi|159121216|gb|EDP46554.1| preprotein translocase, SecY subunit [Rickettsiella grylli]
Length = 452
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 142/290 (48%), Gaps = 31/290 (10%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE++ RL + +++ RIG IP+PG D RL D S S S+ L + GA +
Sbjct: 23 SELKARLLFVLLALIVYRIGAHIPVPGLDPHRL--ADLFSHQSNSILGLFNMFSGGALSR 80
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LG+ P I SI++Q+L + P+L +L+KEG G K+ Y + + A ++AV
Sbjct: 81 FTVFALGLLPYISVSIIVQLLTAVTPALEELKKEGESGRRKLNQYTRYGTALLAFVQAVG 140
Query: 270 VACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+A + +H V + V LV G M + W+ + I+E G G G SLII
Sbjct: 141 MAKW------LVGNHVVLNPGFFFYFVATITLVTGTMFLMWLGEQITEHGIGNGISLIIF 194
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 381
GI++G + K L Q V++ +L +L V +VT + V + G R++ + Y
Sbjct: 195 SGIVSGLPVAMAKSLEQFRQGQVQFLT-LLCILAVILLVTAFVVFMERGQRRITVNYPQR 253
Query: 382 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G K+ SA ++P IN +G+ P + + ++ P A+
Sbjct: 254 QQGRKIYSAQTS---------HLPLKINMAGVIPPIFASSIMLLPGTFAN 294
>gi|343521802|ref|ZP_08758768.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
175 str. F0384]
gi|343401211|gb|EGV13717.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
175 str. F0384]
Length = 433
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 31/338 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 204
++F ++R +L T ++ + R+G +P PG + L Y +G L
Sbjct: 7 QAFRTPDLRAKLLFTLGIMALFRLGSILPAPGVN--LANAKYCIGEAGKDQNLLSLVNVF 64
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LGI P I ASI++Q+L ++P +L KEG G K+ Y ++++G
Sbjct: 65 SGGALLQLSVFALGIMPYITASIIIQLLRVVIPRFEELHKEGQAGTAKLTEYTRYLTIGL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHV-----MVTAFLLV----CGAMTMSWICDTISES 313
+L++ + + ++ +H+ +VT L++ G + W+ + I+E
Sbjct: 125 GLLQSSTIVATAKSGQLFQGCARAQHIIAGDSIVTPLLIIITMTAGTGLIMWLGELITER 184
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SL+I I+ + ++ + G++ F + ++ V + T+ V + +
Sbjct: 185 GIGNGMSLLIFTSIVAQFPSNMFSIAGGNNGAA----NFAI-IVAVVLLATLAVVYIEQA 239
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY K R+ T YIP IN +G+ PV+ + +LA P ++A G
Sbjct: 240 QRRIPVQYA--KRMIGRRQYGGSTT---YIPVKINTAGVIPVIFASSILAMPQLIAG-FG 293
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
SP + V+ IL T++ +Y T Y + F F
Sbjct: 294 SPTSKWVQWIL---TNLQQTSPIYLTAYGVLILFFAFF 328
>gi|387143935|ref|YP_005732329.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TW20]
gi|418955127|ref|ZP_13507075.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941819|emb|CBI50229.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus TW20]
gi|375371580|gb|EHS75350.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-189]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGLAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|37520962|ref|NP_924339.1| preprotein translocase subunit SecY [Gloeobacter violaceus PCC
7421]
gi|35211957|dbj|BAC89334.1| preprotein translocase subunit [Gloeobacter violaceus PCC 7421]
Length = 433
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 164/344 (47%), Gaps = 44/344 (12%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + S +RRRL T L+V+SRIG +IPLP ++ Q +L+
Sbjct: 10 SAQETFAQMASASGLRRRLLFTLGLLVLSRIGIYIPLPEINQAAFQQATQNNAIIGFLNI 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+G G L F LGI P I ASI+MQ+L + P L L+K EG G +I
Sbjct: 70 FAG--------GGFTTLGVFMLGILPYINASIIMQLLVPVFPKLEDLQKNEGEQGRRQIA 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
Y +++LG+AI++++ VA Y P+ A S V+ T L GA+ + W+ + I+E
Sbjct: 122 QYTRYLALGWAIIQSIGVAIYIKPF---VADWSPLFVIQTTLALTAGAIFVMWLGELITE 178
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I V I++ + L S R ++ LL ++ + V V E
Sbjct: 179 KGIGNGASLLIFVSIVSSLPTAFSQTFQLLQADSSRVAGVVVLLLVFLAMI-VGIVFVQE 237
Query: 373 GCRKVKLQYYGFKLASAAREDSP-----ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
G R++ + SA R+ P + Y+P +N G+ P++ + LL P
Sbjct: 238 GTRRI-------PIISARRQVGPRRQQYQQQQTSYLPLRVNQGGVMPIIFASSLLYLPLT 290
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A + V +++N +S W++ +Y + F+ F
Sbjct: 291 FAQFARNA---TVDQVVNAISS----GWIHNILYLVLILFFSFF 327
>gi|15925220|ref|NP_372754.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927810|ref|NP_375343.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus N315]
gi|21283878|ref|NP_646966.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MW2]
gi|49484446|ref|YP_041670.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49487012|ref|YP_044233.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57650814|ref|YP_187029.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus COL]
gi|82751819|ref|YP_417560.1| preprotein translocase subunit SecY [Staphylococcus aureus RF122]
gi|87162195|ref|YP_494819.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196142|ref|YP_500959.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268670|ref|YP_001247613.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus JH9]
gi|150394735|ref|YP_001317410.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus JH1]
gi|151222344|ref|YP_001333166.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156980545|ref|YP_001442804.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu3]
gi|161510434|ref|YP_001576093.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221140168|ref|ZP_03564661.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316991|ref|ZP_04840204.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253729896|ref|ZP_04864061.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253734361|ref|ZP_04868526.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH130]
gi|255007010|ref|ZP_05145611.2| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257423715|ref|ZP_05600144.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257429032|ref|ZP_05605419.1| translocase subunit SecY [Staphylococcus aureus subsp. aureus
68-397]
gi|257434639|ref|ZP_05610690.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M876]
gi|257794576|ref|ZP_05643555.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9781]
gi|258408822|ref|ZP_05681106.1| preprotein translocase subunit SecY [Staphylococcus aureus A9763]
gi|258422421|ref|ZP_05685333.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9719]
gi|258439810|ref|ZP_05690556.1| translocase subunit secY [Staphylococcus aureus A9299]
gi|258442634|ref|ZP_05691194.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A8115]
gi|258446667|ref|ZP_05694822.1| preprotein translocase subunit secY [Staphylococcus aureus A6300]
gi|258450215|ref|ZP_05698307.1| preprotein translocase, SecY subunit [Staphylococcus aureus A6224]
gi|258450774|ref|ZP_05698833.1| preprotein translocase, SecY subunit [Staphylococcus aureus A5948]
gi|258455413|ref|ZP_05703373.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A5937]
gi|262052022|ref|ZP_06024233.1| preprotein translocase SecY [Staphylococcus aureus 930918-3]
gi|282893668|ref|ZP_06301900.1| preprotein translocase, SecY subunit [Staphylococcus aureus A8117]
gi|282902133|ref|ZP_06310026.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C160]
gi|282906573|ref|ZP_06314421.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909543|ref|ZP_06317354.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282915079|ref|ZP_06322856.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M899]
gi|282917575|ref|ZP_06325327.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus D139]
gi|282920805|ref|ZP_06328523.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C427]
gi|282922099|ref|ZP_06329795.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9765]
gi|282925710|ref|ZP_06333358.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C101]
gi|282926776|ref|ZP_06334403.1| preprotein translocase, SecY subunit [Staphylococcus aureus A10102]
gi|283767322|ref|ZP_06340237.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus H19]
gi|283959008|ref|ZP_06376449.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284025256|ref|ZP_06379654.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus 132]
gi|293497483|ref|ZP_06665337.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511058|ref|ZP_06669755.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M809]
gi|293549664|ref|ZP_06672336.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M1015]
gi|294848763|ref|ZP_06789508.1| preprotein translocase [Staphylococcus aureus A9754]
gi|295404906|ref|ZP_06814719.1| preprotein translocase [Staphylococcus aureus A8819]
gi|295428813|ref|ZP_06821437.1| preprotein translocase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275979|ref|ZP_06858486.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MR1]
gi|297209957|ref|ZP_06926353.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297243964|ref|ZP_06927854.1| preprotein translocase [Staphylococcus aureus A8796]
gi|297589701|ref|ZP_06948342.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MN8]
gi|300910969|ref|ZP_07128419.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH70]
gi|304379414|ref|ZP_07362149.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379015354|ref|YP_005291590.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus VC40]
gi|379021895|ref|YP_005298557.1| pre protein translocase secY subunit [Staphylococcus aureus subsp.
aureus M013]
gi|384548437|ref|YP_005737690.1| preprotein translocase subunit [Staphylococcus aureus subsp. aureus
ED133]
gi|384551016|ref|YP_005740268.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus JKD6159]
gi|384865412|ref|YP_005750771.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384866854|ref|YP_005747050.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH60]
gi|384870778|ref|YP_005753492.1| Preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus T0131]
gi|385782465|ref|YP_005758636.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386729936|ref|YP_006196319.1| SecY protein [Staphylococcus aureus subsp. aureus 71193]
gi|386831802|ref|YP_006238456.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387603514|ref|YP_005735035.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus ST398]
gi|387781193|ref|YP_005755991.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus LGA251]
gi|404479524|ref|YP_006710954.1| preprotein translocase subunit SecY [Staphylococcus aureus
08BA02176]
gi|415684480|ref|ZP_11449589.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS00]
gi|415686925|ref|ZP_11450929.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS01]
gi|415692917|ref|ZP_11454808.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS03]
gi|417647898|ref|ZP_12297729.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21189]
gi|417652782|ref|ZP_12302520.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21172]
gi|417654898|ref|ZP_12304614.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21193]
gi|417795991|ref|ZP_12443208.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21305]
gi|417800510|ref|ZP_12447629.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21310]
gi|417801851|ref|ZP_12448933.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21318]
gi|417888259|ref|ZP_12532373.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21195]
gi|417893308|ref|ZP_12537343.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21201]
gi|417895465|ref|ZP_12539451.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21235]
gi|417898973|ref|ZP_12542885.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21259]
gi|417900885|ref|ZP_12544763.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21266]
gi|417903498|ref|ZP_12547342.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21269]
gi|418279661|ref|ZP_12892872.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21178]
gi|418287145|ref|ZP_12899777.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21209]
gi|418310911|ref|ZP_12922442.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21331]
gi|418314280|ref|ZP_12925758.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21334]
gi|418315650|ref|ZP_12927107.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21340]
gi|418319146|ref|ZP_12930532.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21232]
gi|418320123|ref|ZP_12931486.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus VCU006]
gi|418428285|ref|ZP_13001272.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS2]
gi|418431170|ref|ZP_13004069.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418435077|ref|ZP_13006926.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437844|ref|ZP_13009619.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS5]
gi|418440776|ref|ZP_13012460.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS6]
gi|418443746|ref|ZP_13015331.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446745|ref|ZP_13018205.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449834|ref|ZP_13021203.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS9]
gi|418452668|ref|ZP_13023989.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS10]
gi|418563490|ref|ZP_13127926.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21262]
gi|418564126|ref|ZP_13128551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21264]
gi|418568396|ref|ZP_13132742.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21272]
gi|418572025|ref|ZP_13136240.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21283]
gi|418573055|ref|ZP_13137255.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21333]
gi|418577431|ref|ZP_13141529.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418580191|ref|ZP_13144277.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418595653|ref|ZP_13159251.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21342]
gi|418599459|ref|ZP_13162942.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21343]
gi|418601325|ref|ZP_13164761.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21345]
gi|418639989|ref|ZP_13202227.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642210|ref|ZP_13204405.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-24]
gi|418645251|ref|ZP_13207378.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-55]
gi|418648083|ref|ZP_13210133.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-88]
gi|418653597|ref|ZP_13215535.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657457|ref|ZP_13219224.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-105]
gi|418660062|ref|ZP_13221706.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-111]
gi|418663023|ref|ZP_13224551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-122]
gi|418872402|ref|ZP_13426742.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-125]
gi|418876085|ref|ZP_13430333.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418876437|ref|ZP_13430679.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881918|ref|ZP_13436128.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418882192|ref|ZP_13436396.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418884841|ref|ZP_13438997.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418890030|ref|ZP_13444156.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418893009|ref|ZP_13447114.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418898818|ref|ZP_13452882.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418901797|ref|ZP_13455841.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418904594|ref|ZP_13458623.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418907201|ref|ZP_13461219.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG149]
gi|418910060|ref|ZP_13464048.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG547]
gi|418912812|ref|ZP_13466786.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418915357|ref|ZP_13469322.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418918296|ref|ZP_13472245.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418921098|ref|ZP_13475022.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418923956|ref|ZP_13477862.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418926797|ref|ZP_13480687.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418932534|ref|ZP_13486360.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946772|ref|ZP_13499181.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951262|ref|ZP_13503374.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-160]
gi|418980681|ref|ZP_13528455.1| SecY [Staphylococcus aureus subsp. aureus DR10]
gi|418983179|ref|ZP_13530881.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418984007|ref|ZP_13531702.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418989261|ref|ZP_13536928.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418989436|ref|ZP_13537100.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419774907|ref|ZP_14300860.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CO-23]
gi|419786221|ref|ZP_14311958.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-M]
gi|422746534|ref|ZP_16800466.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424774950|ref|ZP_18201951.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CM05]
gi|424786213|ref|ZP_18213004.1| Preprotein translocase secY subunit [Staphylococcus aureus CN79]
gi|440706674|ref|ZP_20887398.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21282]
gi|440735588|ref|ZP_20915191.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443635909|ref|ZP_21120028.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21236]
gi|443640553|ref|ZP_21124541.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21196]
gi|448742562|ref|ZP_21724502.1| preprotein translocase subunit SecY [Staphylococcus aureus
KT/314250]
gi|448745026|ref|ZP_21726901.1| preprotein translocase subunit SecY [Staphylococcus aureus KT/Y21]
gi|81693972|sp|Q5HDX8.1|SECY_STAAC RecName: Full=Protein translocase subunit SecY
gi|83291316|sp|Q99S39.1|SECY_STAAM RecName: Full=Protein translocase subunit SecY
gi|83291322|sp|Q7A468.1|SECY_STAAN RecName: Full=Protein translocase subunit SecY
gi|83291332|sp|Q6GEK3.1|SECY_STAAR RecName: Full=Protein translocase subunit SecY
gi|83291339|sp|Q6G791.1|SECY_STAAS RecName: Full=Protein translocase subunit SecY
gi|83291348|sp|Q7A086.1|SECY_STAAW RecName: Full=Protein translocase subunit SecY
gi|110282999|sp|O08387.2|SECY_STAA8 RecName: Full=Protein translocase subunit SecY
gi|13702030|dbj|BAB43322.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus N315]
gi|14248003|dbj|BAB58392.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Mu50]
gi|21205320|dbj|BAB96014.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MW2]
gi|49242575|emb|CAG41296.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49245455|emb|CAG43932.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285000|gb|AAW37094.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus COL]
gi|82657350|emb|CAI81791.1| preprotein translocase subunit [Staphylococcus aureus RF122]
gi|87128169|gb|ABD22683.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203700|gb|ABD31510.1| preprotein translocase, SecY subunit, putative [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|147741739|gb|ABQ50037.1| protein translocase subunit secY/sec61 alpha [Staphylococcus aureus
subsp. aureus JH9]
gi|149947187|gb|ABR53123.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus JH1]
gi|150375144|dbj|BAF68404.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722680|dbj|BAF79097.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Mu3]
gi|160369243|gb|ABX30214.1| Sec family Type I general secretory pathway preprotein translocase
SecY [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726343|gb|EES95072.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253727678|gb|EES96407.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH130]
gi|257272733|gb|EEV04835.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257279513|gb|EEV10100.1| translocase subunit SecY [Staphylococcus aureus subsp. aureus
68-397]
gi|257285235|gb|EEV15351.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M876]
gi|257788548|gb|EEV26888.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9781]
gi|257840505|gb|EEV64965.1| preprotein translocase subunit SecY [Staphylococcus aureus A9763]
gi|257841852|gb|EEV66289.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9719]
gi|257847586|gb|EEV71588.1| translocase subunit secY [Staphylococcus aureus A9299]
gi|257851755|gb|EEV75689.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A8115]
gi|257854735|gb|EEV77683.1| preprotein translocase subunit secY [Staphylococcus aureus A6300]
gi|257856307|gb|EEV79216.1| preprotein translocase, SecY subunit [Staphylococcus aureus A6224]
gi|257861557|gb|EEV84359.1| preprotein translocase, SecY subunit [Staphylococcus aureus A5948]
gi|257862624|gb|EEV85392.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A5937]
gi|259160077|gb|EEW45110.1| preprotein translocase SecY [Staphylococcus aureus 930918-3]
gi|282312539|gb|EFB42943.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C101]
gi|282315220|gb|EFB45604.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C427]
gi|282318537|gb|EFB48895.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus D139]
gi|282320800|gb|EFB51134.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M899]
gi|282326522|gb|EFB56824.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329472|gb|EFB58993.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282591227|gb|EFB96300.1| preprotein translocase, SecY subunit [Staphylococcus aureus A10102]
gi|282593567|gb|EFB98560.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9765]
gi|282596592|gb|EFC01551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C160]
gi|282763726|gb|EFC03854.1| preprotein translocase, SecY subunit [Staphylococcus aureus A8117]
gi|283461201|gb|EFC08285.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus H19]
gi|283471452|emb|CAQ50663.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus ST398]
gi|283788600|gb|EFC27427.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290918711|gb|EFD95787.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M1015]
gi|291096414|gb|EFE26672.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466045|gb|EFF08574.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M809]
gi|294824142|gb|EFG40566.1| preprotein translocase [Staphylococcus aureus A9754]
gi|294969851|gb|EFG45869.1| preprotein translocase [Staphylococcus aureus A8819]
gi|295127162|gb|EFG56804.1| preprotein translocase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296885630|gb|EFH24567.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178742|gb|EFH37987.1| preprotein translocase [Staphylococcus aureus A8796]
gi|297578212|gb|EFH96925.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MN8]
gi|298695486|gb|ADI98708.1| preprotein translocase subunit [Staphylococcus aureus subsp. aureus
ED133]
gi|300887949|gb|EFK83144.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH70]
gi|302333866|gb|ADL24059.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus JKD6159]
gi|304341946|gb|EFM07850.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312437359|gb|ADQ76430.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH60]
gi|312830579|emb|CBX35421.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129690|gb|EFT85681.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS03]
gi|315193482|gb|EFU23878.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS00]
gi|315198240|gb|EFU28571.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140232|gb|EFW32091.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA131]
gi|329314913|gb|AEB89326.1| Preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus T0131]
gi|329723493|gb|EGG60022.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21172]
gi|329730338|gb|EGG66728.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21193]
gi|329732075|gb|EGG68430.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21189]
gi|334270404|gb|EGL88809.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21305]
gi|334271056|gb|EGL89451.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21310]
gi|334276112|gb|EGL94380.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21318]
gi|341841593|gb|EGS83046.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21235]
gi|341846654|gb|EGS87845.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21266]
gi|341846902|gb|EGS88090.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21259]
gi|341849912|gb|EGS91048.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21269]
gi|341855504|gb|EGS96349.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21201]
gi|341856092|gb|EGS96935.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21195]
gi|344178295|emb|CCC88781.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus LGA251]
gi|359831204|gb|AEV79182.1| Pre protein translocase secY subunit [Staphylococcus aureus subsp.
aureus M013]
gi|364523454|gb|AEW66204.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365164569|gb|EHM56483.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21209]
gi|365170314|gb|EHM61339.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21178]
gi|365227827|gb|EHM69014.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus VCU006]
gi|365233906|gb|EHM74848.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21334]
gi|365235701|gb|EHM76612.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21331]
gi|365241399|gb|EHM82145.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21232]
gi|365243090|gb|EHM83781.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21340]
gi|371970728|gb|EHO88144.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21262]
gi|371977226|gb|EHO94504.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21264]
gi|371977724|gb|EHO94984.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21283]
gi|371979625|gb|EHO96851.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21272]
gi|371983142|gb|EHP00289.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21333]
gi|374364051|gb|AEZ38156.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus VC40]
gi|374396775|gb|EHQ68000.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21343]
gi|374398791|gb|EHQ69945.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21345]
gi|374400754|gb|EHQ71860.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21342]
gi|375015607|gb|EHS09254.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-3]
gi|375017258|gb|EHS10879.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-24]
gi|375018785|gb|EHS12355.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023605|gb|EHS17055.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-55]
gi|375027348|gb|EHS20712.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-88]
gi|375030621|gb|EHS23931.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-105]
gi|375033165|gb|EHS26370.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-111]
gi|375035016|gb|EHS28155.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-122]
gi|375367244|gb|EHS71211.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373664|gb|EHS77326.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-160]
gi|375377422|gb|EHS80890.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-157]
gi|377698754|gb|EHT23101.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377699313|gb|EHT23659.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377700856|gb|EHT25189.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377702057|gb|EHT26382.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377707603|gb|EHT31895.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377709606|gb|EHT33858.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377713383|gb|EHT37591.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377715548|gb|EHT39737.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377718101|gb|EHT42273.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377725887|gb|EHT49999.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377727874|gb|EHT51976.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG547]
gi|377728783|gb|EHT52879.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377729542|gb|EHT53634.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377737201|gb|EHT61211.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377739221|gb|EHT63227.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377740507|gb|EHT64503.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377745150|gb|EHT69126.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377748223|gb|EHT72184.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377753184|gb|EHT77101.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377758855|gb|EHT82736.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377760031|gb|EHT83910.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG149]
gi|377766134|gb|EHT89967.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377767813|gb|EHT91599.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377768582|gb|EHT92360.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377772708|gb|EHT96454.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379991540|gb|EIA13011.1| SecY [Staphylococcus aureus subsp. aureus DR10]
gi|383360867|gb|EID38253.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-M]
gi|383971306|gb|EID87385.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CO-23]
gi|384231229|gb|AFH70476.1| SecY [Staphylococcus aureus subsp. aureus 71193]
gi|385197194|emb|CCG16840.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387715918|gb|EIK03984.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS2]
gi|387716410|gb|EIK04468.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387723620|gb|EIK11353.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS4]
gi|387725016|gb|EIK12646.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS5]
gi|387728108|gb|EIK15607.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS6]
gi|387733057|gb|EIK20254.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS8]
gi|387734050|gb|EIK21206.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS7]
gi|387734377|gb|EIK21530.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS9]
gi|387741948|gb|EIK28772.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS10]
gi|402347052|gb|EJU82119.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CM05]
gi|404441013|gb|AFR74206.1| preprotein translocase SecY subunit [Staphylococcus aureus
08BA02176]
gi|408424154|emb|CCJ11565.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408426143|emb|CCJ13530.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408428131|emb|CCJ15494.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408430120|emb|CCJ27285.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408432107|emb|CCJ19422.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408434101|emb|CCJ21386.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408436094|emb|CCJ23354.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408438077|emb|CCJ25320.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|421955482|gb|EKU07820.1| Preprotein translocase secY subunit [Staphylococcus aureus CN79]
gi|436430468|gb|ELP27830.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506825|gb|ELP42584.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21282]
gi|443405074|gb|ELS63686.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21196]
gi|443408725|gb|ELS67242.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21236]
gi|445546721|gb|ELY15007.1| preprotein translocase subunit SecY [Staphylococcus aureus
KT/314250]
gi|445561642|gb|ELY17834.1| preprotein translocase subunit SecY [Staphylococcus aureus KT/Y21]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|50843291|ref|YP_056518.1| preprotein translocase subunit SecY [Propionibacterium acnes
KPA171202]
gi|282855179|ref|ZP_06264511.1| preprotein translocase, SecY subunit [Propionibacterium acnes J139]
gi|289424834|ref|ZP_06426616.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK187]
gi|289427682|ref|ZP_06429394.1| preprotein translocase, SecY subunit [Propionibacterium acnes J165]
gi|295131361|ref|YP_003582024.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK137]
gi|335052493|ref|ZP_08545379.1| preprotein translocase, SecY subunit [Propionibacterium sp.
409-HC1]
gi|335053570|ref|ZP_08546406.1| preprotein translocase, SecY subunit [Propionibacterium sp.
434-HC2]
gi|342212720|ref|ZP_08705445.1| preprotein translocase, SecY subunit [Propionibacterium sp.
CC003-HC2]
gi|354607553|ref|ZP_09025522.1| preprotein translocase subunit secY [Propionibacterium sp.
5_U_42AFAA]
gi|365963483|ref|YP_004945049.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn31]
gi|365965727|ref|YP_004947292.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn17]
gi|365974662|ref|YP_004956221.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn33]
gi|386024773|ref|YP_005943078.1| preprotein translocase subunit SecY [Propionibacterium acnes 266]
gi|386070033|ref|YP_005984929.1| preprotein translocase subunit SecY [Propionibacterium acnes ATCC
11828]
gi|387504203|ref|YP_005945432.1| preprotein translocase subunit SecY [Propionibacterium acnes 6609]
gi|407936219|ref|YP_006851861.1| preprotein translocase subunit SecY [Propionibacterium acnes C1]
gi|417930014|ref|ZP_12573394.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182]
gi|422386351|ref|ZP_16466471.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA3]
gi|422388825|ref|ZP_16468925.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA2]
gi|422391302|ref|ZP_16471393.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL103PA1]
gi|422392494|ref|ZP_16472563.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL099PA1]
gi|422395738|ref|ZP_16475771.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL097PA1]
gi|422425730|ref|ZP_16502660.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA1]
gi|422428720|ref|ZP_16505630.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA1]
gi|422429693|ref|ZP_16506589.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA2]
gi|422433888|ref|ZP_16510752.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA2]
gi|422436489|ref|ZP_16513338.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA2]
gi|422438956|ref|ZP_16515793.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL092PA1]
gi|422443928|ref|ZP_16520725.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA1]
gi|422444552|ref|ZP_16521336.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA1]
gi|422448499|ref|ZP_16525226.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA3]
gi|422451166|ref|ZP_16527870.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA2]
gi|422453966|ref|ZP_16530647.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA3]
gi|422456874|ref|ZP_16533537.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA1]
gi|422458973|ref|ZP_16535622.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA2]
gi|422461293|ref|ZP_16537923.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL038PA1]
gi|422464197|ref|ZP_16540808.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL060PA1]
gi|422467539|ref|ZP_16544091.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA4]
gi|422468985|ref|ZP_16545515.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA3]
gi|422475900|ref|ZP_16552344.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL056PA1]
gi|422478482|ref|ZP_16554903.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL007PA1]
gi|422481159|ref|ZP_16557561.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA1]
gi|422483668|ref|ZP_16560056.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA1]
gi|422484342|ref|ZP_16560720.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA2]
gi|422486896|ref|ZP_16563239.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA2]
gi|422490092|ref|ZP_16566413.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL020PA1]
gi|422493870|ref|ZP_16570167.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL086PA1]
gi|422496530|ref|ZP_16572814.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA1]
gi|422497210|ref|ZP_16573485.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA3]
gi|422500613|ref|ZP_16576868.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA2]
gi|422503568|ref|ZP_16579806.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA2]
gi|422505786|ref|ZP_16582015.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA2]
gi|422508763|ref|ZP_16584922.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA2]
gi|422512175|ref|ZP_16588310.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA2]
gi|422517112|ref|ZP_16593217.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA2]
gi|422517706|ref|ZP_16593797.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL074PA1]
gi|422522316|ref|ZP_16598342.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL045PA1]
gi|422525035|ref|ZP_16601043.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA2]
gi|422526803|ref|ZP_16602796.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA1]
gi|422530007|ref|ZP_16605972.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA1]
gi|422531057|ref|ZP_16607006.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA1]
gi|422532968|ref|ZP_16608910.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA1]
gi|422538094|ref|ZP_16613973.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL078PA1]
gi|422540676|ref|ZP_16616541.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA1]
gi|422540789|ref|ZP_16616651.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA1]
gi|422544781|ref|ZP_16620616.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA1]
gi|422548417|ref|ZP_16624232.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA3]
gi|422553302|ref|ZP_16629088.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA3]
gi|422555967|ref|ZP_16631728.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA2]
gi|422557874|ref|ZP_16633615.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA2]
gi|422559838|ref|ZP_16635553.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA1]
gi|422563719|ref|ZP_16639394.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA1]
gi|422566606|ref|ZP_16642239.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA2]
gi|422568143|ref|ZP_16643767.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA2]
gi|422571627|ref|ZP_16647209.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL067PA1]
gi|422575092|ref|ZP_16650636.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL001PA1]
gi|422579649|ref|ZP_16655168.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA4]
gi|50840893|gb|AAT83560.1| preprotein translocase SecY subunit [Propionibacterium acnes
KPA171202]
gi|282581767|gb|EFB87152.1| preprotein translocase, SecY subunit [Propionibacterium acnes J139]
gi|289154797|gb|EFD03480.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK187]
gi|289159173|gb|EFD07365.1| preprotein translocase, SecY subunit [Propionibacterium acnes J165]
gi|291376238|gb|ADE00093.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK137]
gi|313763211|gb|EFS34575.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA1]
gi|313773126|gb|EFS39092.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL074PA1]
gi|313793284|gb|EFS41342.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA1]
gi|313801072|gb|EFS42340.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA2]
gi|313808813|gb|EFS47267.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA2]
gi|313810393|gb|EFS48107.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA1]
gi|313812271|gb|EFS49985.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA1]
gi|313817992|gb|EFS55706.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA2]
gi|313819906|gb|EFS57620.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA1]
gi|313823396|gb|EFS61110.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA2]
gi|313824868|gb|EFS62582.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA1]
gi|313828391|gb|EFS66105.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA2]
gi|313830109|gb|EFS67823.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL007PA1]
gi|313832619|gb|EFS70333.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL056PA1]
gi|313837975|gb|EFS75689.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL086PA1]
gi|314914358|gb|EFS78189.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA4]
gi|314919590|gb|EFS83421.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA3]
gi|314924155|gb|EFS87986.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL001PA1]
gi|314925762|gb|EFS89593.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA3]
gi|314930181|gb|EFS94012.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL067PA1]
gi|314957147|gb|EFT01251.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA1]
gi|314957788|gb|EFT01891.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA1]
gi|314960842|gb|EFT04943.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA2]
gi|314963516|gb|EFT07616.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA1]
gi|314964885|gb|EFT08984.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA2]
gi|314969901|gb|EFT13999.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA1]
gi|314973042|gb|EFT17138.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA1]
gi|314975538|gb|EFT19633.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL045PA1]
gi|314979773|gb|EFT23867.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA2]
gi|314982280|gb|EFT26373.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA3]
gi|314984822|gb|EFT28914.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA1]
gi|314986080|gb|EFT30172.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA2]
gi|314988695|gb|EFT32786.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA3]
gi|315077137|gb|EFT49204.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA2]
gi|315079824|gb|EFT51800.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL078PA1]
gi|315083191|gb|EFT55167.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA2]
gi|315086855|gb|EFT58831.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA3]
gi|315089947|gb|EFT61923.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA1]
gi|315090467|gb|EFT62443.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA4]
gi|315093702|gb|EFT65678.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL060PA1]
gi|315096731|gb|EFT68707.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL038PA1]
gi|315097959|gb|EFT69935.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA2]
gi|315100602|gb|EFT72578.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA1]
gi|315103994|gb|EFT75970.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA2]
gi|315106045|gb|EFT78021.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA1]
gi|315109205|gb|EFT81181.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA2]
gi|327325145|gb|EGE66951.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA3]
gi|327325226|gb|EGE67031.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA2]
gi|327325521|gb|EGE67320.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL103PA1]
gi|327332735|gb|EGE74469.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL097PA1]
gi|327444026|gb|EGE90680.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA1]
gi|327449346|gb|EGE96000.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA2]
gi|327449426|gb|EGE96080.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA2]
gi|327451447|gb|EGE98101.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA3]
gi|327451577|gb|EGE98231.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL092PA1]
gi|327451864|gb|EGE98518.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA2]
gi|328752078|gb|EGF65694.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA1]
gi|328755525|gb|EGF69141.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA2]
gi|328756309|gb|EGF69925.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL020PA1]
gi|328761357|gb|EGF74884.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL099PA1]
gi|332676231|gb|AEE73047.1| preprotein translocase subunit SecY [Propionibacterium acnes 266]
gi|333763810|gb|EGL41235.1| preprotein translocase, SecY subunit [Propionibacterium sp.
409-HC1]
gi|333766831|gb|EGL44113.1| preprotein translocase, SecY subunit [Propionibacterium sp.
434-HC2]
gi|335278248|gb|AEH30153.1| preprotein translocase subunit SecY [Propionibacterium acnes 6609]
gi|340768264|gb|EGR90789.1| preprotein translocase, SecY subunit [Propionibacterium sp.
CC003-HC2]
gi|340772701|gb|EGR95202.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182]
gi|353454400|gb|AER04919.1| preprotein translocase subunit SecY [Propionibacterium acnes ATCC
11828]
gi|353556572|gb|EHC25942.1| preprotein translocase subunit secY [Propionibacterium sp.
5_U_42AFAA]
gi|365740164|gb|AEW84366.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn31]
gi|365742408|gb|AEW82102.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn17]
gi|365744661|gb|AEW79858.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn33]
gi|407904800|gb|AFU41630.1| preprotein translocase subunit SecY [Propionibacterium acnes C1]
gi|456738924|gb|EMF63491.1| preprotein translocase subunit SecY [Propionibacterium acnes
FZ1/2/0]
Length = 439
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 44/351 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++L +L+A + ++ S SV V+V + G + W+ + I
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++ G G G S++I I + ++L+ K+ G + W F+ ++ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAW--FIFSMVIAIGLAVMAAV 238
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF 471
A+ P+TS A W+ Y+T +Y FL IF
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIAYFLLIIF 329
>gi|297564057|ref|YP_003683030.1| preprotein translocase subunit SecY [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848506|gb|ADH70524.1| preprotein translocase, SecY subunit [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 437
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 32/310 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R +L T ++ I R+G IP PG + I +D + ++ S D+ G
Sbjct: 1 MLGAFVRAFRTPDLRNKLLFTLFILTIFRLGSVIPAPGINSAAI-RDQMEAITSS-DQSG 58
Query: 203 DF--------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
+ GA L+L+ F LG+ P I ASI++ +L ++P L L+KEG G KI Y
Sbjct: 59 VYALVNLFSGGALLQLAVFALGVMPYITASIIINLLTVVIPRLEALKKEGQSGQSKITQY 118
Query: 255 IWWISLGFAILEAV-IVACY--------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSW 305
+++L +L+A IVA ++P S Y + + ++ F + G + W
Sbjct: 119 TRYLTLMLGVLQATSIVAMARTGALFQGAIPVSSYMPNQDILTLVTIVFTMTAGTAIIMW 178
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
+ I+E G G G SL+I ++ + ++ + + W F L+ + +V +
Sbjct: 179 FGELITERGVGNGMSLLIFTQVIAMFPSSMVALFQER-----SIWVF--SLICIAGLVLI 231
Query: 366 WAVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 424
AVV E R++ +QY + S YIP +N +G+ PV+ + LL
Sbjct: 232 TAVVFMEQAQRRIPVQYAKRMVGRRMYGGS-----STYIPLKVNQAGIIPVIFASSLLYL 286
Query: 425 PSILASILGS 434
P +L ++G
Sbjct: 287 PQLLVGLMGQ 296
>gi|269203863|ref|YP_003283132.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ED98]
gi|262076153|gb|ACY12126.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ED98]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|255324771|ref|ZP_05365885.1| preprotein translocase, SecY subunit [Corynebacterium
tuberculostearicum SK141]
gi|311740038|ref|ZP_07713872.1| preprotein translocase subunit SecY [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255298246|gb|EET77549.1| preprotein translocase, SecY subunit [Corynebacterium
tuberculostearicum SK141]
gi|311305111|gb|EFQ81180.1| preprotein translocase subunit SecY [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 441
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 45/354 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 200
++F +++R+++ T V+I+ R+G IP PG D R+L Q + SV
Sbjct: 6 QAFKDADLRKKIIFTIVMIIAYRVGAQIPSPGVDYASIAGRLRQLTEQSGDLY---SVIN 62
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
L GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y +++L
Sbjct: 63 LFSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEELKKEGQSGQAKMTQYTRYLTL 122
Query: 261 GFAILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
A+L++ IVA + AA + ++V + GA+ + W+ + I+E
Sbjct: 123 ALALLQSSGIVALADREQLLGQGVQVLAADRNFFTLIVLVITMTSGAVLVMWMGELITEK 182
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SL+I GI T +L G F + + G I+ + + +G
Sbjct: 183 GIGNGMSLLIFAGIATRLPTDGVSILQNNGG-----LVFAMVVAG-LVILVVGITFIEQG 236
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 432
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+
Sbjct: 237 QRRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVN 291
Query: 433 -GSP-----FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
GSP +WQ + + P + W Y +Y F + +F + VS+ Y
Sbjct: 292 SGSPGTPDNWWQRNVIAHLQAPSS------WQYIVLY-FVLTIFFAYFYVSVQY 338
>gi|333376293|ref|ZP_08468079.1| preprotein translocase subunit SecY [Kingella kingae ATCC 23330]
gi|332968431|gb|EGK07498.1| preprotein translocase subunit SecY [Kingella kingae ATCC 23330]
Length = 434
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 148/287 (51%), Gaps = 21/287 (7%)
Query: 155 EIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF--GAELKL 210
++R+R LF+ LIV RIG +P+PG D + + Y + SG + L F G+ +
Sbjct: 18 DLRKRVLFLLGALIVF-RIGAHVPVPGVDAAALAKLYQNVAGSGILGMLNMFSGGSLERF 76
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F +GI P I ASI+MQ+ IVPSL L+KEG G + I Y ++ A +++ V
Sbjct: 77 SIFAIGIMPYISASIIMQLAGEIVPSLKALKKEGDAGRKIITKYTRIGTVFLATAQSIGV 136
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A + L ++ +++ + T LV G M + W+ + I+E G G G SL+I GI+ G
Sbjct: 137 AKFVLQQNVVVIP-AMEFYISTISCLVGGTMFLMWLGEQITERGLGNGISLLITAGIIAG 195
Query: 331 YTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLA 387
++ L+ G + +LGLLG+ +AVV E RK+ + Y
Sbjct: 196 VPSGAIQLWTLATSSGMPLTAVGIVLGLLGM-----TYAVVYFESAQRKIPIHY------ 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A R+ + ++PF +N +G+ P + + ++ FPS+ AS G+
Sbjct: 245 -AKRQFGGLDSQNTHMPFKLNMAGVIPPIFASSIIMFPSMFASWFGT 290
>gi|171778396|ref|ZP_02919575.1| hypothetical protein STRINF_00426 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379704457|ref|YP_005202916.1| preprotein translocase subunit SecY [Streptococcus infantarius
subsp. infantarius CJ18]
gi|171282927|gb|EDT48351.1| preprotein translocase, SecY subunit [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|374681156|gb|AEZ61445.1| preprotein translocase, SecY subunit [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 434
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 168/336 (50%), Gaps = 42/336 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I + R+G I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIIFVFRVGTHITVPGINAKSLDQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKSYILIGALLTTGSMIVTWLGEQIADKGFGNGVSMIIF 185
Query: 325 VGILT---GYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ T+Y+ + SS + + F+ L+ + + V + K+ +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLISSYIFVALLIVAVLAIVFFTTFVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P INP+G+ PV+ + + PS + ++ + P
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNGHDIP 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++ LN +T +G IY+ + LF+ F
Sbjct: 297 WLTTLESYLNYQTPIGM------VIYSVLIILFSFF 326
>gi|387151353|ref|YP_005742917.1| Preprotein translocase secY subunit [Staphylococcus aureus
04-02981]
gi|285817892|gb|ADC38379.1| Preprotein translocase secY subunit [Staphylococcus aureus
04-02981]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|120553672|ref|YP_958023.1| preprotein translocase subunit SecY [Marinobacter aquaeolei VT8]
gi|387813038|ref|YP_005428519.1| preprotein translocase subunit SecY [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|120323521|gb|ABM17836.1| protein translocase subunit secY/sec61 alpha [Marinobacter
aquaeolei VT8]
gi|381338049|emb|CCG94096.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 440
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 19/302 (6%)
Query: 139 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFV 194
+ +S+ A + F +E+R RL+ + +++ RIG IP+PG DR L Q+ + +
Sbjct: 3 KTASLPAGAGKGF--AELRSRLWFVFLALLVYRIGAHIPVPGINPDRLAALFDQNQGTIL 60
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
S + + GA ++S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y
Sbjct: 61 S--LFNMFSGGALERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQY 118
Query: 255 IWWISLGFAILEAVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
+ ++ A+++ ++ + + S S V V +F VCGA+ M W+ + I+E
Sbjct: 119 TRYGTVILALVQGFGISVGLASQGVTFNDSFSFHFVAVVSF--VCGAVFMMWLGEQITER 176
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE- 372
G G G SL+I GI+ G + + L Q + +LG +GV I + VV E
Sbjct: 177 GIGNGISLLIFAGIVAGLPGAIGQTLEQARNGEMSLL-VVLG-IGVLAIAVVGFVVFMER 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
G R++ + Y A + + ++P +N +G+ P + + +L FP+ L
Sbjct: 235 GQRRLTINY-----AKRQQGRRVFAQQSSHLPLKVNMAGVIPPIFASSILLFPASLGQWF 289
Query: 433 GS 434
G
Sbjct: 290 GQ 291
>gi|340751223|ref|ZP_08688046.1| preprotein translocase, SecY subunit [Fusobacterium mortiferum ATCC
9817]
gi|340562274|gb|EEO36790.2| preprotein translocase, SecY subunit [Fusobacterium mortiferum ATCC
9817]
Length = 412
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 25/324 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G +IP PG D D L+ ++ D LG GA +
Sbjct: 5 ELRERIVFTLLMFLVARVGTYIPAPGVDV-----DRLATMTAQSDILGYINMFSGGAFKR 59
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I +SI+ +L I+P + +++KEG G KI + ++++G AI++A
Sbjct: 60 VSIFALGIVPYINSSIVFSLLAVIIPKIEEIQKEGESGRNKITQWTRYLTIGIAIIQAFG 119
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + T L G + + WI + IS G G G SL+I + +++
Sbjct: 120 V-CMWLQSVGLVTTPGTMFFLTTIVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVIS 178
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY--GFKLA 387
G + + + + GS P +L + +V V+ G RK+ + Y GF
Sbjct: 179 GGPSNVVQTIQSMRGSKF-LIPVLLLIALAGILVVAGIVIFQLGQRKIPIHYVGKGFNGR 237
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
++S YIP +N +G+ PV+ + ++ PS + + + S + +K L
Sbjct: 238 GGMGQNS-------YIPLKLNSAGVMPVIFASVVMMIPSAIVNAIPSEY--TIKTTLAMV 288
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
S + P VY IYA + F+ F
Sbjct: 289 FS-QSHP-VYMIIYAVVIIFFSFF 310
>gi|392549259|ref|ZP_10296396.1| preprotein translocase subunit SecY [Pseudoalteromonas rubra ATCC
29570]
Length = 442
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 19/304 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A +++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYGTLVLATFQSIGI 134
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A +LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-NLPNMMDGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + ++ + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLNVLALVVISVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 442
+ ++P +N +G+ P + + ++ FP +AS G + F Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADFLQAVSA 307
Query: 443 ILNP 446
+L P
Sbjct: 308 VLTP 311
>gi|288942052|ref|YP_003444292.1| preprotein translocase subunit SecY [Allochromatium vinosum DSM
180]
gi|288897424|gb|ADC63260.1| preprotein translocase, SecY subunit [Allochromatium vinosum DSM
180]
Length = 450
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 14/324 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+RRRL +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 19 TELRRRLMFLLGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERAS 78
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LG+ P I ASI++Q++ +VP L QL+KEG G KI Y + ++ A +A+ ++
Sbjct: 79 LFALGVMPYISASIIVQLMTAVVPQLEQLKKEGEAGRRKITQYTRYGTVFLATFQAIGIS 138
Query: 272 C----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ S A V V LV G M + W+ + I+E G G G S+II GI
Sbjct: 139 MALQGQTAGGSALVAHSGVGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISMIIFGGI 198
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ G L L +L + +L L + VT + V V G R++ + Y A
Sbjct: 199 VAGLPAALGGTL-ELARTGEMNALAVLALFAMALAVTAFVVFVERGQRRITVNY-----A 252
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
+ + ++P +N +G+ P + + ++ FP L GS + ++ I +
Sbjct: 253 RRQQGRKMMQAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSS--EDLRWIADIT 310
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
+ + VY +YA + F F
Sbjct: 311 SKLAPGEPVYVLLYASAIIFFCFF 334
>gi|297569402|ref|YP_003690746.1| preprotein translocase, SecY subunit [Desulfurivibrio alkaliphilus
AHT2]
gi|296925317|gb|ADH86127.1| preprotein translocase, SecY subunit [Desulfurivibrio alkaliphilus
AHT2]
Length = 434
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E+RRR+F T ++ + R G +P PG + I + V G D F GA S
Sbjct: 13 ELRRRIFFTLAMLAVYRAGVQVPTPGVNGEAI-TAFFEQVGGLFDMFNMFSGGALENFSI 71
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV-- 270
F LGI P I ASI+ Q+L +VP L L+KEG G +KI Y + ++G A+++ +I+
Sbjct: 72 FALGIMPYISASIIFQLLTVVVPYLEALKKEGESGRQKITQYTRYATIGLAMIQGIIISI 131
Query: 271 ------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
A LP I M+T L CG + W+ + ++E G G G SLII
Sbjct: 132 GLEGMTAPGELPIVIEPGWGFRLTTMIT---LTCGTAFVMWLGEQMTERGIGNGISLIIY 188
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GIL + Q+ G+ F+ LL + VT + V V R++ +QY
Sbjct: 189 AGILASMPAAIANTF-QMAGTGELPMVFLPLLLVMVLAVTGFIVFVETAQRRIPVQYAKR 247
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
+ + ++P +N +G+ P + + L+ FP + + +
Sbjct: 248 MVGRRMYGGQ-----QSHLPLKVNMAGVIPAIFASSLMMFPETMGNFI 290
>gi|329938212|ref|ZP_08287663.1| preprotein translocase, SecY subunit [Streptomyces
griseoaurantiacus M045]
gi|329302701|gb|EGG46591.1| preprotein translocase, SecY subunit [Streptomyces
griseoaurantiacus M045]
Length = 437
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 27/344 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + G+ G
Sbjct: 1 MLTGFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKSV-QTCIDVAKGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 308
+++ AIL+ + + +++ S+ + + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFTGCPVATSIVPDQSIFMTITMVITMTAGTCMVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + +Q GS W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKTQ--GSLADGWIEFGTVILVGLVMVGLVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 429 ASILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A S W K + G P VY T+Y + F F
Sbjct: 293 AQFSDSNSGW---KTWIQANMVKGDHP-VYITLYFLLIVFFAFF 332
>gi|357236752|ref|ZP_09124095.1| preprotein translocase, SecY subunit [Streptococcus criceti HS-6]
gi|356884734|gb|EHI74934.1| preprotein translocase, SecY subunit [Streptococcus criceti HS-6]
Length = 434
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 53/348 (15%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+ +RR++F T +I++ RIG +I +PG + + + L+ +SGS +
Sbjct: 8 EALRLKNVRRKIFFTIFMILVFRIGAYITVPGVNATSLENMKDLPFLNMLNLISGSA--M 65
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G F S F LG+SP I ASI++Q+L I P V+ K+G G K+ +ISL
Sbjct: 66 GSF------SIFALGVSPYITASIVVQLLQMDIYPRFVEWSKQGEVGRRKLNQATRYISL 119
Query: 261 GFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A +++V I A ++ L S A+ + + + +L G + ++W+ D I++ GFG G
Sbjct: 120 VLAFIQSVSITAGFNILASSKLLANPNPRTFAMVGLILTTGTVIVTWLGDQITDKGFGNG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFT--IVTMWAV 368
S+II GI+ Y E + S + +S + +GLL +F I+ +
Sbjct: 180 VSMIIFAGIIAQIPSAIKSIYNEYFVNIESGQMTNSFIY----VGLL-IFAVLIIVFFTT 234
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + ++ +QY KL A S Y+P +NP+G+ PV+ + + A PS +
Sbjct: 235 FVQQAEYQIPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITAAPSSI 285
Query: 429 ASILGS-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ L S P+ +++E+ + ++ G IYA + LF+ F
Sbjct: 286 ITFLQSTNINLPWLDNLQELFSYQSPTGM------AIYAVLIALFSFF 327
>gi|303278562|ref|XP_003058574.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226459734|gb|EEH57029.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 340
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 19/268 (7%)
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ FF +GI P I ASI MQV+ +VPSL +L K+ + G + +K Y +++ AI ++++
Sbjct: 1 IPFFHVGIGPYIGASIAMQVMVAVVPSLKELTKDPI-GQQTVKQYTRYLTFVVAIFQSIL 59
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
A PY + V AF +CGA+ ++W+ D ++ G G G+S++I + +
Sbjct: 60 TANELRPYYVGGPLSGYFWHAVPAF--ICGAIVVTWLADEMTNYGLGNGTSMLITMSVCG 117
Query: 330 GYTETLYKMLSQLLGSSV--RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY-GFKL 386
Y + L+ GS ++ P++L + + T +V+V G KV L Y+ G +
Sbjct: 118 AYFKAASYYLTSYFGSIAIAQFMPWVLAAVAL----TAGSVLVQTGTCKVPLLYFQGPSI 173
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHVKEILN 445
R +E++ +IPF +NP GMQPVL +L + LA ++ +P W Q L
Sbjct: 174 PGLPRVVR--SEID-HIPFKVNPLGMQPVLVAVFLCEGMTWLAGVMNTPGWYQAACAFLF 230
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDI 473
S W YY + VF F+ D+
Sbjct: 231 SHAS-----WFYYVTFFLIVFGFSYLDL 253
>gi|237786349|ref|YP_002907054.1| preprotein translocase subunit SecY [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759261|gb|ACR18511.1| preprotein translocase SecY subunit [Corynebacterium kroppenstedtii
DSM 44385]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 170/351 (48%), Gaps = 43/351 (12%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-----RRL--IPQDYLSFVSGSVDELGD 203
F ++R+++ T +I++ RIG IP PG D RL + QD S S + L
Sbjct: 8 FRDPDLRKKILFTITMIILYRIGSQIPTPGVDYSSISDRLHDLNQDQSSVYS--MINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++G A
Sbjct: 66 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPKFEQLKKEGQSGQAKMTEYTRYLTVGLA 125
Query: 264 ILE-AVIVACYS----LPYSIYAASHSVKHVMVTAFLLV--CGAMTMSWICDTISESGFG 316
+L+ A IVA L + +V VT +LV GA+ + W+ + I++ G G
Sbjct: 126 LLQSAGIVALADRQQLLGEGVQVLDSNVGTFGVTMMVLVMTAGAVLVMWLGELITDKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SL+I GI T +L GS + ++ + + I ++ + +G R+
Sbjct: 186 NGMSLLIFAGIATRLPADGAAILR---GSGGLAFALVVVGVLILVIGVIF---IEQGQRR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP- 435
+ +QY K R+ E Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYA--KRMVGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLIYVPVLITQIVNSSQ 294
Query: 436 ------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+WQ ++ + NP + W Y +Y + F+ F VSI Y
Sbjct: 295 TNVKNNWWQRDVIQYLQNPAS------WQYIILYFALIIFFSFF-YVSIQY 338
>gi|453075576|ref|ZP_21978362.1| preprotein translocase subunit SecY [Rhodococcus triatomae BKS
15-14]
gi|452763002|gb|EME21289.1| preprotein translocase subunit SecY [Rhodococcus triatomae BKS
15-14]
Length = 437
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 165/344 (47%), Gaps = 40/344 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 204
+F ++RR++ + LI + R G +P PG D + + + +SGS D+ G +
Sbjct: 7 SAFRTPDLRRKILIALGLIALYRFGATLPSPGVDYGNV-KACIDQISGS-DQAGIYSLIN 64
Query: 205 ----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 65 LFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEELRKEGQSGQAKMTQYTRYLSI 124
Query: 261 GFAILEAV-IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
A+L++ IVA + + A SV ++ ++ GA + W+ + I+E
Sbjct: 125 ALAVLQSTGIVALAARGQLLQGCSEPILADDSVFAMVTIVLVMTAGAALVMWMGELITER 184
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTE 372
G G G SL+I GI + +L G + + V +V + VV V +
Sbjct: 185 GVGNGMSLLIFSGIASRLPSEGKAILDSRGG-------LIFAAVCVAALVLIAGVVFVEQ 237
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
G R++ +QY + S Y+P +N +G+ PV+ + LL P+++A +
Sbjct: 238 GQRRIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLS 292
Query: 433 GS------PFWQH-VKE-ILNPETSVGARPWVYYTIYAFFVFLF 468
G+ +WQ + E ++NP + +Y+ + FF + +
Sbjct: 293 GASSATDPSWWQRFINEYLVNPSNPI--YILIYFLLIVFFTYFY 334
>gi|357401188|ref|YP_004913113.1| Preprotein translocase subunit secY [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|386357251|ref|YP_006055497.1| preprotein translocase subunit SecY [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337767597|emb|CCB76308.1| Preprotein translocase subunit secY [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365807759|gb|AEW95975.1| preprotein translocase subunit SecY [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 438
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 157/343 (45%), Gaps = 24/343 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T ++V+ R+G +PLPG D R + Q + G+ G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGILVLFRLGQNVPLPGVDYRNVAQ-CIKEAGGNGGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 MINLFSGGALLQLTIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGQTKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 308
++L +L+ + + +++ S+ V + G + + W+ +
Sbjct: 120 LTLALGVLQGTGLVATAQSGTLFRTCAVGNQVVPDTSIFRTTVMVITMTAGTVMIMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ I G+ +L+ + G V W ++ + + V
Sbjct: 180 LITDRGIGNGMSILMFTSIAAGFPGSLWSIKKS--GKIVSGWGEFFIVIAIGLAMVCLVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G+ + I + + G P+ Y T+Y + F F
Sbjct: 293 VQFSGNSTAGWARWI-STNLTKGDHPF-YLTLYFLLIVFFAFF 333
>gi|254785099|ref|YP_003072527.1| preprotein translocase, SecY subunit [Teredinibacter turnerae
T7901]
gi|237685019|gb|ACR12283.1| preprotein translocase, SecY subunit [Teredinibacter turnerae
T7901]
Length = 441
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 153/323 (47%), Gaps = 16/323 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
E+ RL + IV+ R+G IP+PG D + Q + + G++ LG F GA
Sbjct: 10 GELWARLKFLFLAIVVYRLGTHIPVPGIDPEQVAQLF-NQNQGTI--LGMFNMFSGGALE 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA- 267
++S LGI P I ASI+MQ++ + PSL L+KEG G KI Y ++++ A ++A
Sbjct: 67 RMSILALGIMPYISASIIMQMMSSVTPSLEALKKEGESGRRKISQYTRYLTVALATVQAF 126
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
V+VA S YA ++ LV G++ M W+ + ++E G G G S++I GI
Sbjct: 127 VMVAGMSGQGMAYAGMPVFSFYLIAVTSLVTGSVFMMWLGEQVTERGIGNGISMLIFAGI 186
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKL 386
+ G + + + + L IV W VV E G R++ +QY +
Sbjct: 187 VAGLPSAVGQAFESARQGDLHVLMLLALLFAAVAIV--WFVVRMERGQRRITIQYARRQA 244
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A + T ++P IN +G+ PV+ + +L FP+ +A G+ EIL
Sbjct: 245 AGRMGQGPAQTS---HLPLKINMAGVIPVIFASSILLFPASIAQWFGNASEGKAAEILQE 301
Query: 447 -ETSVGARPWVYYTIYAFFVFLF 468
+G + + I+A + F
Sbjct: 302 VALMIGPGQPLNFVIFAVLIVAF 324
>gi|240017525|ref|ZP_04724065.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA6140]
Length = 416
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 13/278 (4%)
Query: 160 LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGI 217
+F+ LIV RIG IP+PG D + + Y S +G + L F G+ + S F +GI
Sbjct: 1 MFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMFSGGSLERFSIFAIGI 59
Query: 218 SPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPY 277
P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA +
Sbjct: 60 MPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQ 119
Query: 278 SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYK 337
I S HV T LV G M + W+ + I+E G G G SLII GI +G + K
Sbjct: 120 GIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAK 178
Query: 338 MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDSPI 396
+++ S+ +L + G ++ + VV E RK+ + Y + A S
Sbjct: 179 LVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHYAKRQFNGRAGSQS-- 234
Query: 397 TEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
++PF +N +G+ P + + ++ FPS L GS
Sbjct: 235 ----THMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 268
>gi|119472059|ref|ZP_01614317.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Alteromonadales
bacterium TW-7]
gi|359448651|ref|ZP_09238172.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20480]
gi|392539511|ref|ZP_10286648.1| preprotein translocase subunit SecY [Pseudoalteromonas marina
mano4]
gi|119445194|gb|EAW26486.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Alteromonadales
bacterium TW-7]
gi|358045552|dbj|GAA74421.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20480]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMNGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|159901445|ref|YP_001547692.1| preprotein translocase subunit SecY [Herpetosiphon aurantiacus DSM
785]
gi|159894484|gb|ABX07564.1| preprotein translocase, SecY subunit [Herpetosiphon aurantiacus DSM
785]
Length = 439
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 158/305 (51%), Gaps = 24/305 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGDFGAEL 208
+E+R+++ T +++VI R IP+PG DR Q LS ++ ++ L GA
Sbjct: 12 AEVRKKILFTMMMLVIFRFIAAIPVPGVDTAELDRLFNGQLPLSDLANFLNLLSG-GALR 70
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL------GF 262
+ S +G+ P I A I+MQ+L ++P+L QL KEG G +I+ Y +++++ G+
Sbjct: 71 QFSVAAMGVYPYITAQIIMQLLIPLIPALEQLSKEGEQGRNRIQRYQYFLTVPLAYLQGY 130
Query: 263 AILEAVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
++++I + +L ++ ++ + + ++V G+M + W+ + I E G G G S+
Sbjct: 131 GQIKSLINSGINLFGTLNFSITENFFQTFSILTIMVSGSMFLVWMGELIDERGIGNGLSM 190
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
II GI+T +Y+ ++ + +L ++ + T+V + V++TEG R++ +QY
Sbjct: 191 IIFGGIVTALPSMVYQAITTSSSGNNVIGGILLLIVTLATVVGI--VLITEGQRRIPVQY 248
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----GSPFW 437
A R + ++P +N +GM P++ +L FPS +AS GS F+
Sbjct: 249 -----AKRVRGNKVYGGQSSHLPLKVNMAGMIPLIFAQSILIFPSTVASYFWNPNGSGFF 303
Query: 438 QHVKE 442
V
Sbjct: 304 NGVAN 308
>gi|257431678|ref|ZP_05608041.1| translocase subunit secY [Staphylococcus aureus subsp. aureus
E1410]
gi|257282557|gb|EEV12689.1| translocase subunit secY [Staphylococcus aureus subsp. aureus
E1410]
Length = 430
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRSKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|422550160|ref|ZP_16625959.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA1]
gi|314917678|gb|EFS81509.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA1]
Length = 439
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 22/303 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++L +L+A + ++ S SV V+V + G + W+ + I
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++ G G G S++I I + ++L+ K+ G + W F+ ++ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAW--FIFSMVIAIGLAVMAAV 238
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 428 LAS 430
A+
Sbjct: 294 YAT 296
>gi|449464360|ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 571
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 32/343 (9%)
Query: 120 NETFRSKPKMYKNRFLNFIRLSSVLNNAA---ESFFKSEIRRRLFVTAVLIVISRIGYFI 176
+TF S K++ + L++ + +++ FFK + + + +SR+G +I
Sbjct: 94 GQTFNSASSTKKDKSPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYI 153
Query: 177 PLPGFDRRL----IPQDYL-----SFVSGSVDELGDFGAELKLSFFQLGISPQIVASILM 227
PL G +R + Q+ L SF G + LG LGI P I A I+
Sbjct: 154 PLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLG---------ICSLGIVPFINAQIVF 204
Query: 228 QVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSV 286
Q+L I P L L+K EG G +KI Y + S+GFAI++A+ + PY S
Sbjct: 205 QLLAQIYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPY---VNDFST 261
Query: 287 KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSS 346
+ V+ + LL G++ ++I + I++ G G+SL+I I++ + + +Q
Sbjct: 262 EWVLSSVTLLTLGSVVTTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTTAQAFQDG 321
Query: 347 VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFN 406
+ ++ ++ F ++ + V V E RK+ L Y AS + Y+PF
Sbjct: 322 --NYVGLVAIIISFFLLVLGIVYVQEAERKIPLNY-----ASRYTSRGGGLQKSAYLPFK 374
Query: 407 INPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 449
+N SG+ P++ +T LA P LA G + LNP S
Sbjct: 375 VNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALALNPGGS 417
>gi|307946306|ref|ZP_07661641.1| preprotein translocase, SecY subunit [Roseibium sp. TrichSKD4]
gi|307769970|gb|EFO29196.1| preprotein translocase, SecY subunit [Roseibium sp. TrichSKD4]
Length = 443
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 152/300 (50%), Gaps = 21/300 (7%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L+S LN +A F K+E +++R++ T +++ R+G +IPLPG + Q + SG
Sbjct: 7 QLASNLNFSA--FAKAEELKKRIWFTLGALLVYRLGTYIPLPGINPEAFGQAFNQAQSGI 64
Query: 198 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+ F GA +++ F LGI P I ASI+MQ++ +VP+L Q++K+G G + I Y
Sbjct: 65 IGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPTLEQMKKDGEQGRKVINQYT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTI 310
+ ++ A L+A Y + + A++ V T LV G M + W+ + I
Sbjct: 125 RYGTVVLAALQA-----YGIAVGLEGAANVVTDPGWFFRASTVITLVGGTMFLMWLGEQI 179
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
+ G G G SLII GI+ G + L ++ W +LG++ + +V + V +
Sbjct: 180 TSRGIGNGISLIIFAGIVAGLPTAVVSTLELGRQGALATW-IILGIIILAVVVIAFIVFM 238
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R++ +QY ++ + E + ++P +N +G+ P + + LL P+ ++
Sbjct: 239 ERAQRRLLIQYPKRQMGNRMFEGN-----TSFLPLKLNTAGVIPPIFASSLLLVPATISG 293
>gi|343183574|gb|AEM01127.1| preprotein translocase subunit SecY [Criblamydia sequanensis]
Length = 456
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 41/344 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGDFGAELK 209
E+R+++ T +++ + RIG FIP+PG + + + + G + ++ GA +
Sbjct: 13 ELRQKILFTFLMLCVCRIGGFIPVPGINGEVALSYFRQAMGGGQNIFQMIDIFSGGAFSQ 72
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAV 268
++ LG+ P I ASI+ Q+L PSL + +E D G KI +++ ++L++
Sbjct: 73 MTVVALGVVPYISASIITQLLVATWPSLQREIRENQDVGRRKINKITRLLTIILSVLQSG 132
Query: 269 IVACYSLPYSIYAASHSVKHVM-------------VTAFLLVCGAMTMSWICDTISESGF 315
+ A Y++ + ++ V + G M + WI + I+E G
Sbjct: 133 LFAKYAVQMNFARPGIITGELLDFQLFGMPWLFYLVVVATMTTGTMFLMWIGEQITEKGI 192
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVT 371
G G SLII +GIL+ + + QL S + +L L+GVF VT+ +++
Sbjct: 193 GNGMSLIITIGILSQLPSAMGMIFQQLNLDSQEPGQMNFASVLLLIGVFVFVTLATILII 252
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+G R++ LQ+ AR EV+ YIP +N +G+ PV+ + LL FP+ +
Sbjct: 253 QGHRRIPLQH--------ARRVVGRKEVQGGASYIPLKVNYAGVIPVIFASSLLMFPTTI 304
Query: 429 ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S +G+ W V ++P+T +Y +Y + F F
Sbjct: 305 GSFIGAGNWVGMVASWMDPKTK------MYLIMYVMLIIFFTYF 342
>gi|312899063|ref|ZP_07758447.1| preprotein translocase, SecY subunit [Megasphaera micronuciformis
F0359]
gi|310619848|gb|EFQ03424.1| preprotein translocase, SecY subunit [Megasphaera micronuciformis
F0359]
Length = 420
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 21/320 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E R+R T ++ +I R+G IP+PG D I F SG++ L D GA K S
Sbjct: 13 EFRKRAVFTLIMFIIFRLGVHIPVPGVDAAAIEG---LFNSGNLFGLLDLFSGGALSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
+ I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + ++ ++A
Sbjct: 70 VLAMSITPYINASIIMQLLTAVVPTFEQWSKDNQDGRDKIQKVTRYGTVLLGFIQA-FAM 128
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
Y+L + +S V++ A +L G + W+ D I+ G G G SLII GI+ +
Sbjct: 129 SYALKVNNALIDNSWTTVLMVAVILTAGTCFLMWLGDQITAGGIGNGISLIIFAGIVARF 188
Query: 332 ---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
TLY+ + G+ + + L+ +F IV + V VT+G R+V +QY A
Sbjct: 189 PNGVNTLYQYVQA--GTINIFQAALFALIALFMIVIV--VEVTQGQRRVNVQY-----AK 239
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+IP +N +G+ P++ + +L FP +A + + Q + ++ T
Sbjct: 240 RVVGRKMYGGHSTHIPLKVNQAGVIPIIFASSVLMFPITIAQFIQNDTIQWLAQVFGWGT 299
Query: 449 SVGARPWVYYTIYAFFVFLF 468
A Y + FF + +
Sbjct: 300 L--ANTVAYAVLIIFFTYFY 317
>gi|297717866|gb|ADI50076.1| preprotein translocase SecY subunit [Candidatus Odyssella
thessalonicensis L13]
Length = 435
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 157/312 (50%), Gaps = 25/312 (8%)
Query: 149 ESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
+F K+E +++R++ T + +++ R G +IPLPG + L+ Q++ + SG + + D
Sbjct: 15 STFSKAEDLKKRIYFTLLALIVYRFGTYIPLPGVNP-LVIQEFAAMNSGGIFGILDMFSG 73
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA +++ F L I P I ASI++Q++ + P L L+KEG G +K+ Y + ++ A
Sbjct: 74 GAISRMTVFALNIMPYISASIIVQLMTSVSPHLEALKKEGESGRKKLNQYTRYGTVLLAS 133
Query: 265 LEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
++A +A L + S +V + T L G + + W+ + I+ G G G+
Sbjct: 134 VQAFGIAV-GLEKMVVGTSTAVLNPGFFFKFSTIVTLTGGTLFIMWLGEQITSRGLGNGT 192
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SLII GI+ ++ K ++ +L LL V +V + V + + R++ +
Sbjct: 193 SLIIYSGIVANLPQSFAKTFISARTGAISNGILVLILLMV-AVVIAYVVFMEKAQRRILI 251
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY ++A+ D P ++P +N SG+ P + LL FP+ +A GS
Sbjct: 252 QYPKRQVAA----DRPAQAQTTHLPLKLNSSGVIPPIFANSLLLFPATIAGFSGS----- 302
Query: 440 VKEILNPETSVG 451
+NP++ +G
Sbjct: 303 ----MNPDSILG 310
>gi|213964901|ref|ZP_03393100.1| preprotein translocase, SecY subunit [Corynebacterium amycolatum
SK46]
gi|213952437|gb|EEB63820.1| preprotein translocase, SecY subunit [Corynebacterium amycolatum
SK46]
Length = 443
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 164/339 (48%), Gaps = 39/339 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF---GAELK 209
++R+++F T +I++ RIG IP PG D +L+ + +S SV L + GA L+
Sbjct: 13 DLRKKIFFTLTMIILYRIGSQIPTPGIDYQLVNAQLEQISKDQSSVYSLINLFSGGALLQ 72
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
++ F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L++
Sbjct: 73 MAIFGIGIMPYITASIIVQLLTVVIPHFEQLKKEGQSGQTKMTQYTRYLTVALALLQSAG 132
Query: 270 VACYSLPYSIYAASHS--VKHVMV-----TAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
+ + ++ S S VK V ++ GA+ + W+ + I++ G G G SL+
Sbjct: 133 IVAMADRGALLGGSQSLLVKDAGVFDLVVMVVVMTAGAVLVMWMGELITDRGVGNGMSLL 192
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 382
I GI G +L G V + ++ +L I+ + + + +G R++ +QY
Sbjct: 193 IFAGIAAGMPAQGANILRSTTG--VVFATVIVAVL----ILIIGVIFIEQGQRRIPVQYA 246
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP------- 435
+ S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 247 KRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYVPVLITQIVQSGQSNPNMD 301
Query: 436 -FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ ++ +L P + W Y ++ + F+ F
Sbjct: 302 NWWQRNVIQYLLAPSS------WQYILLFFLMIIFFSFF 334
>gi|359455881|ref|ZP_09245087.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20495]
gi|414070182|ref|ZP_11406170.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
Bsw20308]
gi|358047185|dbj|GAA81336.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20495]
gi|410807487|gb|EKS13465.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
Bsw20308]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-DFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|332533194|ref|ZP_08409061.1| preprotein translocase SecY subunit [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037273|gb|EGI73728.1| preprotein translocase SecY subunit [Pseudoalteromonas haloplanktis
ANT/505]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|308233877|ref|ZP_07664614.1| preprotein translocase, SecY subunit [Atopobium vaginae DSM 15829]
gi|328943585|ref|ZP_08241050.1| preprotein translocase subunit SecY [Atopobium vaginae DSM 15829]
gi|327491554|gb|EGF23328.1| preprotein translocase subunit SecY [Atopobium vaginae DSM 15829]
Length = 426
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 34/298 (11%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDELGDF- 204
+ +F E+R ++F+T ++++ R G ++P PG F R L S SG+V L F
Sbjct: 6 SSAFRIKELRNKIFITVAILLLYRFGAYLPAPGVPFARMLQAFQEASAGSGAVAVLNLFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA ++S F LGI P I A I++Q+ ++PSL +L KEG G KI Y ++++ A
Sbjct: 66 GGALSRVSVFSLGIMPYITAQIILQMFQAVIPSLGELAKEGESGQRKITQYTRYLTVVLA 125
Query: 264 ILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
++ A+ + Y + +S ++ ++ LLV GAM + W+ + I++ G G G
Sbjct: 126 LVNAIGYYFLFKSYGISFSNLGFPEYIEAFIIVGVLLV-GAMIIMWLGEVITQRGVGNGM 184
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT-------- 371
SLII I+ G L L SSV F + V T+VT+ ++
Sbjct: 185 SLIIFANIMAG--------LPSALTSSVNTSTFGM----VTTLVTLLVILAIIPIIIFIE 232
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
G R++ +QY A + Y+P +N +G+ P++ + LL P+ +A
Sbjct: 233 RGQRRIPVQY-----AKRVMGRRIMGGQSTYLPIKVNTAGVVPIIFASALLYMPAQVA 285
>gi|357639738|ref|ZP_09137611.1| preprotein translocase, SecY subunit [Streptococcus urinalis
2285-97]
gi|357588192|gb|EHJ57600.1| preprotein translocase, SecY subunit [Streptococcus urinalis
2285-97]
Length = 434
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 166/340 (48%), Gaps = 50/340 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 14 NVRHKIFYTLFIILVFRIGTHITVPGINAKSLEQLSDLPFLNMLNLVSGN--------AM 65
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 66 RNFSVFSMGVSPYITASIIVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ ++ +S +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAAFNTLSNVGLVSSPNVKTYILIGTLLTTGSVIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCR 375
GI++ + + + S + ++GLL I+ + A+V V +
Sbjct: 186 AGIISSIPNAIATVREDYFVNIKSSDINHSYIVVGLL----IIAVLAIVFFTTFVQQAEY 241
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
K+ +QY KL A S Y+P +NP+G+ PV+ + + PS L L +
Sbjct: 242 KIPIQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLLPFLQNG 292
Query: 435 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++ +LN +T G YA + LF+ F
Sbjct: 293 KNIPWLTTLQSLLNYQTPTGM------VFYAILIILFSFF 326
>gi|333996145|ref|YP_004528758.1| preprotein translocase subunit SecY [Treponema azotonutricium
ZAS-9]
gi|333734582|gb|AEF80531.1| preprotein translocase, SecY subunit [Treponema azotonutricium
ZAS-9]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---VDELGDF--G 205
F E+R R+ TA+++V+ R+G +P+PG + + + +LS + VD L F G
Sbjct: 9 FRVKELRERIIFTALMLVVFRVGAVLPIPGINVQELNAYFLSQANSGNAIVDYLDFFAGG 68
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A S F LGI P I SI+MQ+L + P L ++ +E G +KI+SY ++ +++
Sbjct: 69 AFSNFSVFMLGIMPYISMSIIMQLLIIVFPRLKKISQEE-GGRKKIQSYQRMGTIVVSLI 127
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC------GAMTMSWICDTISESGFGQGS 319
++ V Y+ SI + ++ + + F L+ G M + WI + I++ G G G
Sbjct: 128 QSFAVTQYA--QSISRSVENLLSMNIVPFTLIAMLTVTTGTMFLMWIGEQITQRGIGNGI 185
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I GI+ + L++++ ++ + ++ + +F V V +G RK+++
Sbjct: 186 SLLIFAGIVARLPQALWELMQRVRSGDLNLVFVIVVFV-MFVAVVALVVFEQQGQRKIQV 244
Query: 380 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
Y G ++ A YIPF INPSG+ PV+ + +L FP +AS +G
Sbjct: 245 NYAKRVVGRRMYGAQ---------NTYIPFKINPSGVIPVIFASSILTFPLQIASTIGGN 295
Query: 435 -PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ V +L P R +Y +Y + F F
Sbjct: 296 VPWLAAVSNVLTP------RGPLYNVLYVILIIFFAYF 327
>gi|303276823|ref|XP_003057705.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226460362|gb|EEH57656.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 423
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 138/276 (50%), Gaps = 22/276 (7%)
Query: 166 LIVISRIGYFIPLPGFDRRLIPQDYLSFVS--GSVDELGDFGAELKLSFFQLGISPQIVA 223
L+V+SRIG +IP+ G DR + G VD L G+ KL F LGI P I +
Sbjct: 15 LLVVSRIGTYIPISGVDRAAFAESLAGGGGMLGYVDTLTG-GSISKLGIFSLGIVPFINS 73
Query: 224 SILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 282
SI+ Q+L + PSL +L+K EG G K Y + +L FA+++AV Y P Y
Sbjct: 74 SIIFQLLTSVFPSLSKLQKEEGEAGRRKFMQYQRYGALAFAVVQAVGQCLYVRP---YVE 130
Query: 283 SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL 342
S+ ++ ++ +L GAM + +I + ++E G G+SL+I I++ + + LS+
Sbjct: 131 DFSLGWLVESSAVLTAGAMILLYIGEVLNELKLGNGTSLLIFTNIVSSLPSSFGQTLSEA 190
Query: 343 --LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG-FKLASAAREDSPITEV 399
G + F G F + T+ V V E RK+ + Y F+ A+
Sbjct: 191 GEKGDNAVLPVF----FGAFFLSTLGIVYVQEAERKIPMNYSTRFQAGGLAKSS------ 240
Query: 400 EPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
Y+PF +N +G+ P++ + LLA P+ +A +P
Sbjct: 241 --YLPFKVNSAGVMPIIFASSLLALPATIARFAPNP 274
>gi|359442404|ref|ZP_09232272.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20429]
gi|392535589|ref|ZP_10282726.1| preprotein translocase subunit SecY [Pseudoalteromonas arctica A
37-1-2]
gi|358035778|dbj|GAA68521.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20429]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AS-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|12230545|sp|Q9XQU4.1|SECY_PEA RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|4929291|gb|AAD33936.1|AF144684_1 secY [Pisum sativum]
Length = 527
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 29/309 (9%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 201
FF + + + +SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 111 FFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRL 170
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 260
G LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+
Sbjct: 171 G---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASV 221
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
GFAI++A+ + PY A + + + + LL G++ ++I + I+E G G+S
Sbjct: 222 GFAIVQAIGQVLFLRPY---ANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTS 278
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
L+I I++ + + SQ + + ++ ++ F ++ + V V E RK+ +
Sbjct: 279 LLIFTNIISYLPASFGRTFSQAFSDA--NYVGLVTIIVSFFLLVLGIVYVQEAERKIPIN 336
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y AS S E Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 337 Y-----ASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTA 391
Query: 441 KEILNPETS 449
LNP S
Sbjct: 392 AVALNPGGS 400
>gi|418417686|ref|ZP_12990880.1| preprotein translocase, SecY subunit [Streptococcus urinalis
FB127-CNA-2]
gi|410871277|gb|EKS19232.1| preprotein translocase, SecY subunit [Streptococcus urinalis
FB127-CNA-2]
Length = 434
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 166/340 (48%), Gaps = 50/340 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 14 NVRHKIFYTLFIILVFRIGTHITVPGINAKSLEQLSDLPFLNMLNLVSGN--------AM 65
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 66 RNFSVFSMGVSPYITASIIVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ ++ +S +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAAFNTLSNVGLVSSPNVKTYILIGTLLTTGSVIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCR 375
GI++ + + + S + ++GLL I+ + A+V V +
Sbjct: 186 AGIISSIPNAIATVREDYFVNIKSSDINHSYIVVGLL----IIAVLAIVFFTTFVQQAEY 241
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
K+ +QY KL A S Y+P +NP+G+ PV+ + + PS L L +
Sbjct: 242 KIPIQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLLPFLQNG 292
Query: 435 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++ +LN +T G YA + LF+ F
Sbjct: 293 RNIPWLTTLQSLLNYQTPTGM------VFYAILIILFSFF 326
>gi|344923978|ref|ZP_08777439.1| preprotein translocase subunit SecY [Candidatus Odyssella
thessalonicensis L13]
Length = 448
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 157/312 (50%), Gaps = 25/312 (8%)
Query: 149 ESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
+F K+E +++R++ T + +++ R G +IPLPG + L+ Q++ + SG + + D
Sbjct: 15 STFSKAEDLKKRIYFTLLALIVYRFGTYIPLPGVNP-LVIQEFAAMNSGGIFGILDMFSG 73
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA +++ F L I P I ASI++Q++ + P L L+KEG G +K+ Y + ++ A
Sbjct: 74 GAISRMTVFALNIMPYISASIIVQLMTSVSPHLEALKKEGESGRKKLNQYTRYGTVLLAS 133
Query: 265 LEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
++A +A L + S +V + T L G + + W+ + I+ G G G+
Sbjct: 134 VQAFGIAV-GLEKMVVGTSTAVLNPGFFFKFSTIVTLTGGTLFIMWLGEQITSRGLGNGT 192
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SLII GI+ ++ K ++ +L LL V +V + V + + R++ +
Sbjct: 193 SLIIYSGIVANLPQSFAKTFISARTGAISNGILVLILLMV-AVVIAYVVFMEKAQRRILI 251
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY ++A+ D P ++P +N SG+ P + LL FP+ +A GS
Sbjct: 252 QYPKRQVAA----DRPAQAQTTHLPLKLNSSGVIPPIFANSLLLFPATIAGFSGS----- 302
Query: 440 VKEILNPETSVG 451
+NP++ +G
Sbjct: 303 ----MNPDSILG 310
>gi|336436021|ref|ZP_08615734.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008061|gb|EGN38080.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
1_4_56FAA]
Length = 450
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 154/301 (51%), Gaps = 20/301 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ +F EIR+++F T +++++ R G +P PG D I Q++ + +G
Sbjct: 1 MLDTVRRAFRIEEIRKKIFYTFLMLIVVRFGSQLPAPGVDPTFI-QNFFANQTGDAFNFF 59
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D G+ ++S F L I+P I +SI+MQ+L +P L ++KEG DG +KI + +++
Sbjct: 60 DAFTGGSFTQMSVFALSITPYITSSIIMQLLTIAIPKLEDMQKEGADGRKKIAAITRYVT 119
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC----GAMTMSWICDTISESGF 315
+ A++E+ +A V+ V A ++VC G+ + WI + I+E G
Sbjct: 120 VVLALIESTAMAV-----GFGRQGLLVEFNFVNAAIVVCTLTAGSAFLMWIGERITEKGV 174
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G S+++ + IL+ + L ++ +Q + + + +L V V ++ +++ +G
Sbjct: 175 GNGISIVLLINILSRVPQDLVQLYTQFISGKTLAKRILAAVIILLVLLAVVVFVIILQDG 234
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY + + +IP +N +G+ P++ + L+ P ++A+ LG
Sbjct: 235 ERRIAVQY-----SQKVQGRKTYGGRSSHIPLKVNTAGVIPIIFASSLMQTPIVIATFLG 289
Query: 434 S 434
Sbjct: 290 K 290
>gi|374374201|ref|ZP_09631860.1| protein translocase subunit secY/sec61 alpha [Niabella soli DSM
19437]
gi|373233643|gb|EHP53437.1| protein translocase subunit secY/sec61 alpha [Niabella soli DSM
19437]
Length = 445
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 20/298 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E+R ++ T VL + R+G I LPG + + Q + SG +D + F GA + S
Sbjct: 15 DELRSKILFTLVLTAVYRVGAHIVLPGINPVALEQYSKANQSGILDLINTFAGGAFNQAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI +Q++ +VPS +++KEG G KI ++++ +++A
Sbjct: 75 IFALGIMPYITASIFIQLMTVLVPSFQKMQKEGESGRNKINQITRYLTVAVTLVQAFAYI 134
Query: 272 CY---SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
Y + +I S + T +L G + + W+ + I++ G G G+SLII VGIL
Sbjct: 135 AYLHQTAGPAIMPGYGSFNFTLTTVVVLTAGTLFVMWLGEKITDKGLGNGTSLIIMVGIL 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
+ + L+ SVR ++ + + ++ + M +++ +G RKV + Y
Sbjct: 195 ARLPQAFTQELAV---RSVRTGDILIFIIEIALYIAINMGCIILVQGTRKVPVNY----- 246
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-----SILGSPFWQH 439
A + ++P +N +G+ P++ ++ P++ + LG F H
Sbjct: 247 AKQIVGNRQFGGARQFLPLKVNAAGVMPIIFAQAIIFVPTLFTMGSKNATLGRMFTDH 304
>gi|319893180|ref|YP_004150055.1| preprotein translocase subunit SecY [Staphylococcus
pseudintermedius HKU10-03]
gi|386318601|ref|YP_006014764.1| preprotein translocase subunit SecY [Staphylococcus
pseudintermedius ED99]
gi|317162876|gb|ADV06419.1| Preprotein translocase secY subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|323463772|gb|ADX75925.1| preprotein translocase, SecY subunit [Staphylococcus
pseudintermedius ED99]
Length = 430
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 158/337 (46%), Gaps = 39/337 (11%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FFK+ E+R ++ T ++VI +IG +IP PG FD R Q G D L
Sbjct: 7 NFFKTKEVRNKILFTLAMLVIFKIGTYIPAPGVNPAAFDNRQGSQ-------GVTDLLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A S F +GI P I ASI+MQ+L IVP + K+G G +K+ ++ + ++
Sbjct: 60 FGGGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGETGRKKLNNFTRYFTI 119
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-----GAMTMSWICDTISESGF 315
A ++++ S ++ Y +K V ++LL+ G + W+ + I++ G
Sbjct: 120 VLAFIQSI---GMSFQFNNYLDGALIKEQNVWSYLLIAIVLTSGTAFLMWLGEQITQYGV 176
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G S+II GIL+ L + Q +G W + GL+ ++T+ AV V +
Sbjct: 177 GNGISIIIFAGILSTLPSGLMQFYQQEFIGQDDVTFAWLKVAGLVVGMILLTVGAVYVLQ 236
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
RK+ +QY K S R S T Y+P +N +G+ PV+ + P L+
Sbjct: 237 AIRKIPIQYA--KKQSHMRLGSQAT----YLPLKVNSAGVIPVIFSMAFFLLPRTLSLFF 290
Query: 433 GSPFW-QHVKEILNPETSVGARPWVYYTI-----YAF 463
W Q + +P ++G +V I YAF
Sbjct: 291 PDADWAQKLGNYADPSHNMGMVVYVVLIIAFTYFYAF 327
>gi|431932128|ref|YP_007245174.1| preprotein translocase subunit SecY [Thioflavicoccus mobilis 8321]
gi|431830431|gb|AGA91544.1| preprotein translocase, SecY subunit [Thioflavicoccus mobilis 8321]
Length = 450
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E+R+RLF +++ RI F+P+PG + + + +D F GA + S
Sbjct: 20 ELRQRLFFVIGALLVYRIATFVPVPGVNPEALAALFDQHQGSMLDLFNMFSGGALQRASI 79
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
LGI P I ASI+MQ++ ++P L QL+KEG G KI SY + +L A +A+ ++
Sbjct: 80 VALGIMPYISASIIMQMMAAVIPKLEQLKKEGESGRRKITSYTRYGTLVLATFQAIGISV 139
Query: 273 ----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ S V A LV G M + W+ + ISE G G G SLII GI+
Sbjct: 140 ALQGQAVGGSAIVTQSGFGFVFTAAVSLVTGTMFLMWLGEQISERGIGNGISLIIFSGIV 199
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G L +L+ + +L + + VT + V V G R++ + Y A
Sbjct: 200 AGLPSAAGGTL-ELVRTGEMNALTVLAMFALALAVTAFVVFVERGQRRITVNY-----AR 253
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + ++P +N +G+ P + + ++ FP L GS
Sbjct: 254 RQQGRKLMAAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGS 299
>gi|374988965|ref|YP_004964460.1| preprotein translocase subunit SecY [Streptomyces bingchenggensis
BCW-1]
gi|297159617|gb|ADI09329.1| preprotein translocase subunit SecY [Streptomyces bingchenggensis
BCW-1]
Length = 437
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 150/311 (48%), Gaps = 32/311 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG + Q+ + + + + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLFRLGQHIPIPGINY----QNVQTCIDQAKGQQG 56
Query: 203 DFG--------AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
FG A L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 57 LFGLVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQY 116
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSW 305
++++ AIL+ + + ++ A ++ +V + G + W
Sbjct: 117 TRYLTVALAILQGTGLVATARSGQLFQACDVGNQIVKDDAIFTTVVMVITMTAGTALIMW 176
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIV 363
+ + +++ G G G S+++ V I G+ ++ K +++G W F L +L +V
Sbjct: 177 LGELVTDRGIGNGMSILMFVSIAAGFPSAMWTIKQQGKIMGG---WLEFGLVVLCGLVMV 233
Query: 364 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 423
+ V V + R++ +QY + + + YIP +N +G+ PV+ + LL
Sbjct: 234 GL-VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPMKVNQAGVIPVIFASSLLY 287
Query: 424 FPSILASILGS 434
P+++ GS
Sbjct: 288 IPALIVQFSGS 298
>gi|119773374|ref|YP_926114.1| preprotein translocase subunit SecY [Shewanella amazonensis SB2B]
gi|119765874|gb|ABL98444.1| protein translocase subunit secY/sec61 alpha [Shewanella
amazonensis SB2B]
Length = 446
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 19/289 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + G++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QKGTI--LGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G KI Y W +L ++V
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQSV 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNPGFGFYFVAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFK 385
I+ G + + Q + +L L+GV VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLN--VLVLLLIGVIVFAVTYFVVFVERGQRRIVVNY---- 245
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + + ++P +N +G+ P + + ++ FP LA G
Sbjct: 246 -AKRQQGNKIFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|350424463|ref|XP_003493804.1| PREDICTED: preprotein translocase subunit secY-like [Bombus
impatiens]
Length = 447
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 29/333 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
E++RRL + +++ RIG FIP+PG + L+ Q S+ + GA +
Sbjct: 17 GELKRRLLFVLLALIVFRIGSFIPVPGINAGELSALLKQAASDNGIISMFNMFSGGALSR 76
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F LGI P I ASI++Q+L I P+L +L+KEG G KI Y + +L AI++A+
Sbjct: 77 ASIFALGIMPYISASIIVQLLTAINPTLAELKKEGESGRRKISQYTRYGTLALAIVQAIG 136
Query: 270 VACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+A LP +I H V + + LV G M + W+ + I+E G G G S+II
Sbjct: 137 IAT-GLP-NIPGFGHVVVNPGFSFYFIATVSLVTGTMFLMWLGEQITERGVGNGISIIIF 194
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ G + + + Q + ++ VF I T + V V G R++ + Y
Sbjct: 195 AGIVAGLPVAIGETIEQARSGVLHPLLLLVVAALVFGI-TYFVVFVERGQRRIVVNY--- 250
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPFWQH--- 439
A + ++P IN +G+ P + + ++ P++LAS L W++
Sbjct: 251 --AQRQQGRRIYAAQSSHLPLKINMAGVIPAIFASTIIMLPAMLASWLQGDGQGWRYIFV 308
Query: 440 -VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+K+ L+ E +Y +YA + F F
Sbjct: 309 LIKQYLSQEQP------LYIVLYAAAIIFFCFF 335
>gi|416058065|ref|ZP_11580409.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348000074|gb|EGY40873.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 441
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGII 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + + +VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLVVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGKQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|387120535|ref|YP_006286418.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415765296|ref|ZP_11482681.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416048090|ref|ZP_11576212.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416069574|ref|ZP_11583308.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429735165|ref|ZP_19269140.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993458|gb|EGY34815.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347999945|gb|EGY40753.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348653955|gb|EGY69616.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875027|gb|AFI86586.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429149980|gb|EKX92936.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans Y4]
Length = 441
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGII 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGKQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|84515656|ref|ZP_01003017.1| preprotein translocase SecY [Loktanella vestfoldensis SKA53]
gi|84510098|gb|EAQ06554.1| preprotein translocase SecY [Loktanella vestfoldensis SKA53]
Length = 446
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R+R+ T L++I R+G FIP+PG D + Q +G L F GA +++
Sbjct: 14 TELRQRILFTIGLLMIYRLGTFIPVPGIDGIALQQFMEDAQAGIGGILSMFTGGALSRMA 73
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+L + L L+KEG G K+ Y + ++ A +A +A
Sbjct: 74 IFTLGIMPYISASIVMQLLGSMWEPLKNLKKEGEAGRRKLNQYTRYGTVVLATAQAYGLA 133
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL A+ +V G M + W+ + I+ G G G SLII VGI+
Sbjct: 134 V-SLEAGGLASDPGFFFRAACVITIVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEI 192
Query: 332 TETLYKMLSQLLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 386
L + LSQ G + PF ++G+L + +V + V + RK+ +QY G K+
Sbjct: 193 PAALAQFLSQ--GRTGAISPFVIIGILLMVIVVLTFVVFMERSLRKIHIQYPRQQRGMKI 250
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P+ +++ G
Sbjct: 251 YDGSSS---------HLPIKVNPAGVIPAIFASALLLLPTTISTFSGG 289
>gi|117621057|ref|YP_854863.1| preprotein translocase subunit SecY [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|334702744|ref|ZP_08518610.1| preprotein translocase subunit SecY [Aeromonas caviae Ae398]
gi|117562464|gb|ABK39412.1| preprotein translocase, SecY subunit [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 442
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 152/329 (46%), Gaps = 25/329 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL I++ R G ++P+PG D ++ + + G++ E+ + GA +
Sbjct: 16 SELKSRLLFVLGAIIVFRAGSYVPIPGIDAAVLAELFQQ-QKGTIIEMFNMFSGGALSRA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y W +L +A+ +
Sbjct: 75 SILALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQAIGI 134
Query: 271 ACYSLPYSIYA-ASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + +H TA + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 135 AT-GLPNMMQGLVTHPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + Q + +L L VF VT + V V G R++ + Y A
Sbjct: 194 AGLPHAIGATAEQARQGELHILLLLLLGLIVFA-VTYFVVFVERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 442
+ ++P +N +G+ P + + ++ FP + S G + Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTITSWFGQGEGKIADILQQVSM 307
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L P +P +Y +YA + F F
Sbjct: 308 VLQP-----GQP-LYEMLYAAAIIFFCFF 330
>gi|416032635|ref|ZP_11572903.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347999818|gb|EGY40632.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 436
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGII 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGKQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|302336361|ref|YP_003801568.1| protein translocase subunit secY/sec61 alpha [Olsenella uli DSM
7084]
gi|301320201|gb|ADK68688.1| protein translocase subunit secY/sec61 alpha [Olsenella uli DSM
7084]
Length = 426
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 18/295 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDE 200
+L A +F E+R ++ V+ ++ + R G ++P PG F R L S SG++
Sbjct: 1 MLKGIANAFRIPELRNKILVSIAILALYRFGAYLPAPGVPFARMLEAFSAASASSGAIAV 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
L F GA ++S F LGI P I A I++Q++ ++PSL +L KEG G KI Y ++
Sbjct: 61 LNLFSGGALSRVSVFSLGIMPYITAQIILQMMQAVIPSLGELAKEGESGQRKITQYTRYL 120
Query: 259 SLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++ A++ A+ + Y + +S +++ +++ +LV GA+ + W+ + I++ G
Sbjct: 121 TIVLALINAIGYLFLFKSYGINFSQMGFPEAIEDIIIVG-VLVTGAIIIMWLGEVITQRG 179
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SLII I+ G L +S + SS L LL +F I+ + V + G
Sbjct: 180 VGNGMSLIIFANIMAGLPSAL---ISSVNTSSAGTIMTALTLLVIFAIIPV-IVYIERGQ 235
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
R++ +QY A + Y+P +N +G+ P++ + +L P+ LA
Sbjct: 236 RRIPVQY-----AKRVVGRKVMGGQSTYLPIKVNTAGVVPIIFASAILYLPAQLA 285
>gi|359433065|ref|ZP_09223408.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20652]
gi|357920221|dbj|GAA59657.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20652]
Length = 442
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AS-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|145300915|ref|YP_001143756.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida A449]
gi|411011158|ref|ZP_11387487.1| preprotein translocase subunit SecY [Aeromonas aquariorum AAK1]
gi|418362589|ref|ZP_12963216.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|423199213|ref|ZP_17185796.1| preprotein translocase subunit secY [Aeromonas hydrophila SSU]
gi|423204912|ref|ZP_17191468.1| preprotein translocase subunit secY [Aeromonas veronii AMC34]
gi|142853687|gb|ABO92008.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686170|gb|EHI50780.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|404625788|gb|EKB22603.1| preprotein translocase subunit secY [Aeromonas veronii AMC34]
gi|404629567|gb|EKB26314.1| preprotein translocase subunit secY [Aeromonas hydrophila SSU]
Length = 442
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 152/329 (46%), Gaps = 25/329 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL I++ R G ++P+PG D ++ + + G++ E+ + GA +
Sbjct: 16 SELKSRLLFVLGAIIVFRAGSYVPIPGIDAAVLAELFQQ-QKGTIIEMFNMFSGGALSRA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y W +L +A+ +
Sbjct: 75 SILALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQAIGI 134
Query: 271 ACYSLPYSIYA-ASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + +H TA + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 135 AT-GLPNMMQGLVTHPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + Q + +L L VF VT + V V G R++ + Y A
Sbjct: 194 AGLPHAIGATAEQARQGELHILLLLLLGLIVFA-VTYFVVFVERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 442
+ ++P +N +G+ P + + ++ FP + S G + Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTITSWFGQGEGKVADILQQVSM 307
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L P +P +Y +YA + F F
Sbjct: 308 VLQP-----GQP-LYEMLYAAAIIFFCFF 330
>gi|326792587|ref|YP_004310408.1| preprotein translocase subunit SecY [Clostridium lentocellum DSM
5427]
gi|326543351|gb|ADZ85210.1| preprotein translocase, SecY subunit [Clostridium lentocellum DSM
5427]
Length = 422
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 25/324 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF---GAELKL 210
E+R +L T + + RIG I +PG DR + + SG V++ GA L
Sbjct: 15 ELRNKLIYTLWMFLFIRIGVSITVPGVDRAALAAANAANANSGFVNQFMSMITGGANQDL 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
+ F LG+ P I ASI+MQ+L + L +L KEG +G +KI Y +++LG A++++
Sbjct: 75 ALFALGVGPYITASIIMQLLQVAISKLEELAKEGEEGRKKINKYTRYVTLGLAVVQS--- 131
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
L S+ ++ + G+M + WI + I+ G G G SL I +GI+
Sbjct: 132 WAMVLTNRNVLVDDSIWTFLLVMIAFIAGSMLVMWIGEQITSKGVGNGMSLYIFIGIIYS 191
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ +L + P + +L F + + V++ +G R+V +QY A
Sbjct: 192 LPTNFAGIF--VLNKDRIYIPII--VLIAFIALVGFTVLMAQGERRVSVQY-----AKRM 242
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVKEILNPE 447
YIP +N G+ P++ ++ FP I+ +++G S WQ V LN
Sbjct: 243 AGRKVYGGQSQYIPVKVNLGGVLPIIFAMSIMNFPQIIINLVGAQVSENWQTVLNWLNWT 302
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
VG+ IY +F F F
Sbjct: 303 NPVGS------VIYIILIFAFAFF 320
>gi|309777151|ref|ZP_07672114.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
3_1_53]
gi|308915021|gb|EFP60798.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
3_1_53]
Length = 434
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 163/335 (48%), Gaps = 25/335 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDELGDF 204
A+ F +IR R+F T ++ + R G I +PG D + + QD F ++ LG
Sbjct: 6 ADMFKNKDIRNRIFFTLAMLFVFRFGSAITVPGVDVKELTNGIQDNSLF--AMINMLGGG 63
Query: 205 GAELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
G E +LS F +G+ P I ASI++Q+L ++P+L +L K G G ++I Y ++++ +
Sbjct: 64 GLE-QLSIFAMGVGPYITASIIIQLLSMDVIPALTELAKGGATGKKQIDRYTRYLAVVLS 122
Query: 264 ILEA-VIVACYSLPYSIYAASHSV-KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+A +V +S Y+ + S ++ A LL G+M + WI D IS G G G S+
Sbjct: 123 FFQASTLVYSFSTQYTTLLVNGSGWASILYVATLLTAGSMFILWIGDRISMKGIGNGVSM 182
Query: 322 IICVGILTGYT---ETLYKMLSQLLGSSVRWWPFML-GLLGV-FTIVTMWAVVVTEGCRK 376
II GI+ T ++ L SS + + GL V + ++ ++ V + RK
Sbjct: 183 IIAAGIIARLPYQFTTAWQTLVDPSNSSATFNGILTYGLYIVSYLLIIVFVVFMQTAERK 242
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY + + ++ + Y+P IN + + PV+ + +LA P + ++
Sbjct: 243 IPIQYTSSTVTTRKKDMT-------YLPLKINSASVIPVIFASAILAAPLQICKMV---- 291
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W + ET +G + + IY +FLF F
Sbjct: 292 WPAAGWVKTMETYMGMQTPISLVIYVILIFLFTFF 326
>gi|289450525|ref|YP_003475764.1| preprotein translocase subunit SecY [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185072|gb|ADC91497.1| preprotein translocase, SecY subunit [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 433
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 170/340 (50%), Gaps = 26/340 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS-GSVDEL 201
V+ ++F ++R+R+ T +I++ R+G IP+PG DR+L F GS+ +
Sbjct: 4 VIETLRKAFNVGDMRKRIIFTIGMIILFRVGGNIPVPGIDRQLFSHLIDRFGQIGSMMNI 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA S F +GI+P I +SI++Q++ ++PSL L+KEG G +K++S + ++++G
Sbjct: 64 ISGGALKAASIFAMGITPYINSSIIIQLMTVVLPSLQNLQKEGETGRKKMQSIVRYVTIG 123
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV----CGAMTMSWICDTISESGFGQ 317
++++V + Y+ +A+ +V ++ AF+++ G + WI + I+E G G
Sbjct: 124 LGLIQSV-----AFWYATRSAASTVMPSVLNAFVVILSFTAGTAVIMWIGEQINEWGVGN 178
Query: 318 GSSLIICVGILTG---YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV--VTE 372
G SL+I GIL+ T L++ ++ + LL V V + V V+
Sbjct: 179 GISLLIYAGILSRVPYMTSGLFQYFQAWSAANNFYIALFFALLVVIAFVVIIVFVSYVSL 238
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ + Y A Y+P +N SG+ P++ LL+ P++L S
Sbjct: 239 AERRIPVTY-----AKRVIGRKQFGGQTTYLPLKVNQSGVLPIIFALSLLSLPNMLISF- 292
Query: 433 GSPFWQHVKE-ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
F+ H ++N + G+ P+ YY + A + F F
Sbjct: 293 ---FFSHSNNWLVNWFRNPGSSPF-YYVLQALLIIGFTFF 328
>gi|115475569|ref|NP_001061381.1| Os08g0254500 [Oryza sativa Japonica Group]
gi|75294264|sp|Q6ZG25.1|SECY_ORYSJ RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|37572923|dbj|BAC98517.1| putative Preprotein translocase secY subunit, chloroplast precursor
[Oryza sativa Japonica Group]
gi|37573023|dbj|BAC98535.1| putative Preprotein translocase secY subunit, chloroplast precursor
[Oryza sativa Japonica Group]
gi|113623350|dbj|BAF23295.1| Os08g0254500 [Oryza sativa Japonica Group]
gi|125602744|gb|EAZ42069.1| hypothetical protein OsJ_26630 [Oryza sativa Japonica Group]
Length = 556
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 138 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG- 195
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++A
Sbjct: 196 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQA 255
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 256 IGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 312
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F + + V V E RK+ L Y A
Sbjct: 313 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLFLVLGIVYVQEAERKIPLNY-----A 365
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
S S + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 366 SRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNP 424
>gi|422348980|ref|ZP_16429872.1| preprotein translocase, SecY subunit [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658740|gb|EKB31604.1| preprotein translocase, SecY subunit [Sutterella wadsworthensis
2_1_59BFAA]
Length = 443
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 14/282 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++ RL A+ +V+ RIG +P+PG D ++ Q + G + F GA + S
Sbjct: 17 GDLKGRLIFLALALVVYRIGAHVPVPGIDPDMLKQLFDEQQGGILGLFNMFSGGALSRFS 76
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+L +++P L LRKEG G KI Y + +L + + +A
Sbjct: 77 VFALGIMPYISASIIMQMLSYVLPELEALRKEGESGRRKITQYTRYGTLLLGLFQGFGIA 136
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+ + T L+ G M + W+ + I+E G G G S+II GI+ G
Sbjct: 137 VALESQAGLVLDPGFMFRITTTISLLTGTMFLMWLGEQITERGLGNGISIIIFAGIVAGL 196
Query: 332 ---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
T L++++S S + + ++ + VT + V + G R++ + Y ++ +
Sbjct: 197 PSGTSGLFQLVSTGAISPLA----AIFVIAIILAVTAFVVFIERGQRRITVNYAKRQIGN 252
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
Y+P +N SG+ P + + L+ FP+ LA
Sbjct: 253 KIYGGQ-----SSYLPLKMNMSGVIPPIFASSLILFPATLAG 289
>gi|392309054|ref|ZP_10271588.1| preprotein translocase subunit SecY [Pseudoalteromonas citrea NCIMB
1889]
Length = 442
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A +++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYGTLVLATFQSIGI 134
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-GLPSMMDGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + +L + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLHVLALLLIAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 442
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAISA 307
Query: 443 ILNP 446
+L P
Sbjct: 308 VLTP 311
>gi|333895234|ref|YP_004469109.1| preprotein translocase subunit SecY [Alteromonas sp. SN2]
gi|332995252|gb|AEF05307.1| preprotein translocase subunit SecY [Alteromonas sp. SN2]
Length = 439
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 161/338 (47%), Gaps = 26/338 (7%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L++ A+S SE++ RL IV+ R+G ++P+PG D ++ D G++ E+ +
Sbjct: 6 LDSGAKSGL-SELKARLLFVLGAIVVFRLGSYVPIPGIDPAVL-ADLFEQQKGTIVEMFN 63
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S LGI P I ASI+MQ+L + P +++L+KEG G KI Y +++L
Sbjct: 64 MFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMIELKKEGEAGRRKISQYTRYLTL 123
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
AI +++ ++ LP I + LV G M + W+ + I+E G G G
Sbjct: 124 VLAIFQSIGIST-GLPNLINGLVLNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNG 182
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 377
S++I GI+ G + + Q + F+L L+ V I + VV E G R++
Sbjct: 183 ISILIFAGIVAGLPTAIGQTAEQARQGDINLL-FLL-LMAVIVIALTYLVVFVERGQRRI 240
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---S 434
+ Y A + ++P +N +G+ P + + ++ FP +A G S
Sbjct: 241 VVNY-----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIAGWFGQNES 295
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q V +L+P +P +Y +YA + F F
Sbjct: 296 TAWLQDVALMLSP-----GQP-LYVMLYATAIIFFCFF 327
>gi|333998870|ref|YP_004531482.1| preprotein translocase subunit SecY [Treponema primitia ZAS-2]
gi|333739605|gb|AEF85095.1| preprotein translocase, SecY subunit [Treponema primitia ZAS-2]
Length = 442
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 36/338 (10%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---VDELGDF--G 205
F E+R RL TA+++++ R+G +P+PG + R + +LS + +D L F G
Sbjct: 9 FRVKELRERLLFTALMLIVFRLGAVLPIPGINVRELNAYFLSQQNSGNAIIDYLDFFAGG 68
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A S F LGI P I SI+MQ+L + P L ++ +E G +K+++Y ++ ++
Sbjct: 69 AFSNFSVFMLGIMPYISMSIIMQLLLIVFPKLKKISQEE-GGKKKVQAYQRIGTVVVCLI 127
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC------GAMTMSWICDTISESGFGQGS 319
++ V Y+ SI + ++ + + F L+ G M + W+ + I++ G G G
Sbjct: 128 QSFAVTQYA--QSISRSVENLLSLNILPFTLLAMLTVTTGTMFLMWMGEQITKRGIGNGI 185
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I GI+ L+++ ++ + F++ + +F V + +G RK+ +
Sbjct: 186 SLLIFAGIVARLPHALWELFGRVRNGDLNLV-FVIVVFIMFVAVVALVIFEQQGQRKIPV 244
Query: 380 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
Y G ++ A YIPF INPSG+ PV+ + +L FP +AS +G
Sbjct: 245 HYAKRVVGRRMYGAQ---------NTYIPFKINPSGVIPVIFASSILTFPLQIASTIGGN 295
Query: 435 -PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V LNP R +Y +Y + F F
Sbjct: 296 VAWLAAVSRALNP------RGALYNVLYVLLIIFFAYF 327
>gi|399516352|ref|ZP_10757959.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Leuconostoc
pseudomesenteroides 4882]
gi|398648796|emb|CCJ65986.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Leuconostoc
pseudomesenteroides 4882]
Length = 444
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 41/340 (12%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
LS++ N E +IR++L T +++ + RIG I +PG + + D + SG ++
Sbjct: 2 LSTLFNAVREK----DIRKKLGWTFLILFVYRIGTHITVPGVNPAAMS-DMAN--SGLMN 54
Query: 200 ELGDF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIW 256
L F G + S F +G+SP + A I++Q+L IVP V+ K+G G K+ +
Sbjct: 55 ILNIFSGGGLMNYSLFAMGVSPYVTAQIVVQLLQLDIVPRFVEWSKQGEVGRRKLNNATR 114
Query: 257 WISLGFAILEAV-IVACYSL--PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
W++L A +++V I A ++ Y + + +++V +V ++ G W+ + I+E
Sbjct: 115 WLTLVLAFVQSVGITAGFNSLSSYGLVSQTNNVMSFIVIGSVMTIGTFFAMWLGEMITEK 174
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAV 368
G G G S+II GI+ E LY++ + + G + W FM+ LL +V +
Sbjct: 175 GLGNGVSMIIFAGIIAQAPEGLYEIFKENILQAGNGELLNGWVFMIVLLVAMILVVAFTT 234
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL--------TTTY 420
EG R++++QY SA S E Y+P +N SG+ PV+ T
Sbjct: 235 WSYEGTRRLQMQY----TRSATSYGS-----EAYLPLKVNVSGVIPVIFASSFISTPQTV 285
Query: 421 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTI 460
LLAF AS + ++Q +++I + T GA + YT+
Sbjct: 286 LLAFQDKYAS---AQWYQVMQQIFSMTTLPGA---ILYTV 319
>gi|374316512|ref|YP_005062940.1| preprotein translocase subunit SecY [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352156|gb|AEV29930.1| preprotein translocase, SecY subunit [Sphaerochaeta pleomorpha str.
Grapes]
Length = 438
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 164/338 (48%), Gaps = 27/338 (7%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
N+ E + ++R+++F+T L+++SR+G IP+PG D ++ +LS + S L ++
Sbjct: 3 NSLVEMYRMKDLRKKIFITLGLLIVSRLGAVIPIPGVDPEVLKLYFLSQSTSSNVGLTEY 62
Query: 205 ------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA S F LG+ P I I++Q+L +VP+L +L E G +KI+ Y +
Sbjct: 63 LNFFSGGAFANFSLFMLGVMPYISTQIILQLLMLVVPTLKKL-AEDPSGQKKIQQYTRYG 121
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ ++++ +V Y+ V ++ + GAM + W+ + I++ G G G
Sbjct: 122 TIVVCLIQSYVVTIYAKSIPGVLTMGIVPFTLIAMLTVTAGAMLLVWLGNKITQFGIGNG 181
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 377
SL+I GI+ + + + ++ P ++ ++ + IV + VV E G RK+
Sbjct: 182 ISLLIFAGIVARIPAAMVTLFKSVSAGTLN--PIVVVVVFIMFIVVVALVVYEEQGVRKI 239
Query: 378 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ Y G K+ A YIP +NPS + PV+ + LL+FP +A+ LG
Sbjct: 240 PVNYAKRVVGRKMYGAQST---------YIPIKLNPSNVIPVIFASALLSFPLQIATTLG 290
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P + + N + GA Y IYA + F F
Sbjct: 291 -PEVKWLATFSNWLSPQGAP---YLIIYALLIIAFAFF 324
>gi|312115707|ref|YP_004013303.1| preprotein translocase subunit SecY [Rhodomicrobium vannielii ATCC
17100]
gi|311220836|gb|ADP72204.1| preprotein translocase, SecY subunit [Rhodomicrobium vannielii ATCC
17100]
Length = 440
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 13/284 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E+++RL T ++I R+G FIPLPG D L+ + + S + L F GA + +
Sbjct: 21 GELKQRLLFTLGALLIYRLGTFIPLPGIDTALLAKLFESAPNTVFGMLNVFSGGALSRSA 80
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F L I P I ASI++Q+L ++P+L L+KEG G ++I Y ++++ A ++A + A
Sbjct: 81 IFLLNIMPYITASIIIQLLTSVIPTLETLKKEGESGRKQINQYTRYLTVVIATVQATLTA 140
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L S + + T LV G M + W+ + I+ G G G+SLII GI+
Sbjct: 141 -QGLNSSALEPGWFFQ--LTTVVSLVGGTMFLVWLGEQITARGIGNGASLIIFAGIVAEM 197
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
LY++L Q G S P +LGL + V V RK+ +QY ++ +
Sbjct: 198 PTALYRILEQ--GRSGVLSPAVILGLFVMMVAVVTVVVFFERAQRKLTIQYPKRQVGNRM 255
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N SG+ P + + LL P+ + I+G
Sbjct: 256 FQGD-----SSHLPLKLNASGVIPPIFASTLLYLPATIEQIVGK 294
>gi|222099987|ref|YP_002534555.1| preprotein translocase subunit SecY [Thermotoga neapolitana DSM
4359]
gi|221572377|gb|ACM23189.1| Preprotein translocase SecY subunit [Thermotoga neapolitana DSM
4359]
Length = 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 165/335 (49%), Gaps = 33/335 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 200
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRSRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K +Y ++L
Sbjct: 67 FTG-GALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAAYTRRLTL 125
Query: 261 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+A ++ S P + ++++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFISFSLARSNPDMVAPGVNALQFTILSTMSMLAGTMFLLWLGERITERGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G S++I GI+ Y + + + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPSYIRR--AYLGGLNILEWIFLIAI----ALITIFGIILVQQAERR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A Y+P +N G+ P++ + +++ PS +ASI S
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNS-- 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +K + A ++Y IY VF F F
Sbjct: 293 -ETLKSLFR------AGGFLYLLIYGLLVFFFTYF 320
>gi|400405279|ref|YP_006588138.1| protein translocase subunit SecY [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400363642|gb|AFP84710.1| protein translocase subunit secY/sec61 alpha [secondary
endosymbiont of Ctenarytaina eucalypti]
Length = 443
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
E++RRL +V+ RIG FIP+PG D ++ L G++ E+ + GA +
Sbjct: 17 GELKRRLLFVIGALVVFRIGSFIPIPGIDGTVL-ATLLERQRGTIIEMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L I P L +++KEG G KI Y + +L AI +A+ +
Sbjct: 76 SIFALGIMPYISASIIIQLLTVIHPVLAEIKKEGESGRRKIGQYTRYGALILAIFQAIGI 135
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFL-----LVCGAMTMSWICDTISESGFGQGSSLIICV 325
A LP ++ V + T + LVCG M + W+ + I+E G G G S+II
Sbjct: 136 AT-GLP-NMPGMQGLVINPDCTFYFTAVVSLVCGTMFLMWLGEQITERGIGNGISMIIFA 193
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GI+ G + + Q + ++ +L + + VT + V V G R++ + Y
Sbjct: 194 GIVAGLPPAIAHTIEQARQGDMHFFALLL-ITALVFSVTFFVVFVERGQRRIVVNY---- 248
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A + + ++P +N +G+ P + + ++ FP+ +AS
Sbjct: 249 -AKSQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIAS 292
>gi|315655850|ref|ZP_07908748.1| preprotein translocase subunit SecY [Mobiluncus curtisii ATCC
51333]
gi|315489914|gb|EFU79541.1| preprotein translocase subunit SecY [Mobiluncus curtisii ATCC
51333]
Length = 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 163/336 (48%), Gaps = 28/336 (8%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV--SGSVDELGDF-- 204
++F ++R +L T ++ + R G FIPLPG D + + +S V +GS+ +L +
Sbjct: 7 QAFKTPDLRNKLLFTFFIMALFRWGSFIPLPGVDYATL-KSVISDVQNNGSLLDLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y ++++
Sbjct: 66 GGALLQLSVFALGIMPYITASIIIQLLRVVIPRFEDLHKEGQTGQAKLTQYTRYLTIALG 125
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMS-------WICDTISESGF 315
+L++ + + +++ + + K + +A++ + + M+ W+ + I+E G
Sbjct: 126 VLQSTSIITAARTGALFGRASNQKIIPSDSAWIFILQILVMTAATGLIMWMGELITEKGV 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G S++I I+ L+ + G + F L ++ + +VT+ V V + R
Sbjct: 186 GNGMSILIFTSIIANLPRKLFA----IAGGNGGIQKF-LAIVTLILLVTLAVVYVEQAMR 240
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY K R T YIP IN SG+ PV+ + +L+ P +LA G
Sbjct: 241 RIPVQYA--KRMVGRRMYGGTTT---YIPLKINMSGVIPVIFASSILSLPMMLAQ-FGD- 293
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q+ K I + + W Y IY F F F
Sbjct: 294 --QNAKWIQWISMNFRSSSWFYLVIYGLLTFAFAFF 327
>gi|298345444|ref|YP_003718131.1| preprotein translocase subunit SecY [Mobiluncus curtisii ATCC
43063]
gi|304391000|ref|ZP_07372952.1| preprotein translocase subunit SecY [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315656224|ref|ZP_07909115.1| preprotein translocase subunit SecY [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298235505|gb|ADI66637.1| preprotein translocase SecY subunit [Mobiluncus curtisii ATCC
43063]
gi|304325883|gb|EFL93129.1| preprotein translocase subunit SecY [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315493226|gb|EFU82826.1| preprotein translocase subunit SecY [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 163/336 (48%), Gaps = 28/336 (8%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV--SGSVDELGDF-- 204
++F ++R +L T ++ + R G FIPLPG D + + +S V +GS+ +L +
Sbjct: 7 QAFKTPDLRNKLLFTFFIMALFRWGSFIPLPGVDYATL-KSVISDVQNNGSLLDLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y ++++
Sbjct: 66 GGALLQLSVFALGIMPYITASIIIQLLRVVIPRFEDLHKEGQTGQAKLTQYTRYLTIALG 125
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMS-------WICDTISESGF 315
+L++ + + +++ + + K + +A++ + + M+ W+ + I+E G
Sbjct: 126 VLQSTSIITAARTGTLFGRASNQKIIPSDSAWIFILQILVMTAATGLIMWMGELITEKGV 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G S++I I+ L+ + G + F L ++ + +VT+ V V + R
Sbjct: 186 GNGMSILIFTSIIANLPRKLFA----IAGGNGGIQKF-LAIVTLILLVTLAVVYVEQAMR 240
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY K R T YIP IN SG+ PV+ + +L+ P +LA G
Sbjct: 241 RIPVQYA--KRMVGRRMYGGTTT---YIPLKINMSGVIPVIFASSILSLPMMLAQ-FGD- 293
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
Q+ K I + + W Y IY F F F
Sbjct: 294 --QNAKWIQWISMNFRSSSWFYLVIYGLLTFAFAFF 327
>gi|344201989|ref|YP_004787132.1| preprotein translocase subunit SecY [Muricauda ruestringensis DSM
13258]
gi|343953911|gb|AEM69710.1| preprotein translocase, SecY subunit [Muricauda ruestringensis DSM
13258]
Length = 447
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 24/337 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E+R+R+ +T L+++ R G + LPG D + + +G + L F GA S
Sbjct: 15 DELRQRIILTLGLLLVYRFGAQVVLPGIDTTQLAELSSQTENGILGILNAFTGGAFANAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI-- 269
F LGI P I ASI++Q++ +P L +L+KEG G + I W+++G I++A
Sbjct: 75 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIGICIVQAPAYL 134
Query: 270 --VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ +P S + + ++ +LV G + W+ + I++ G G G SL+I VGI
Sbjct: 135 YGLGALGVPDSAFVLGKGLDFIVPAVIILVTGCVFAMWLGEKITDKGIGNGISLLIMVGI 194
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ + + ++ FML + V+ +V + +V +T R++ +Q Y + A
Sbjct: 195 IATLPQAFAQEFVSRTTNNTGGIMFMLIEVIVWFLVILASVYLTMAVRQIPVQ-YARRTA 253
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
S E + + YIP +N SG+ P++ ++ P S++G F
Sbjct: 254 SGGYEKN-VMGARQYIPLKLNASGVMPIIFAQAIMFAP----SLIGRTF----------- 297
Query: 448 TSVGARPWVYYTIYAFFVFLFNI-FDIVSILYTLLFT 483
A W+ F +NI F ++ I++T +T
Sbjct: 298 NDTAAGQWMEVQFADIFGLAYNILFAVLIIIFTYFYT 334
>gi|445421863|ref|ZP_21436168.1| preprotein translocase, SecY subunit [Acinetobacter sp. WC-743]
gi|444757133|gb|ELW81664.1| preprotein translocase, SecY subunit [Acinetobacter sp. WC-743]
Length = 440
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 11 YREIIRRLMFLIGALVVF-RLGAHIPLPGIDNVALER---FFKANEGTFLGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 G-IGMCAGLISQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPNLVIQAFTSVDNGQSSLIGLAVFGLLSVAVLAAIVFIEKAQRRIPVNY-- 239
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 240 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 287
>gi|407010032|gb|EKE25040.1| hypothetical protein ACD_5C00316G0003 [uncultured bacterium]
Length = 423
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 26/299 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 194
+L + F +E+R ++ ++V+ RI +PLPG D RRL + L+
Sbjct: 1 MLEKLTQIFKVTELRNKILFILGILVVFRIAANVPLPGVDMEQLRRLFEGNQFLGMLNVF 60
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKS 253
SG G +S LG+ P I ASI+MQ+L IVP + Q+ ++EG G +K
Sbjct: 61 SG--------GGLTNISIVMLGVGPYITASIIMQLLTMIVPRVEQIYKEEGEAGRQKFNM 112
Query: 254 YIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
+ W+++ A L+ + + + + M+ + G + + W+ + I+E
Sbjct: 113 WTRWLTVPLAALQTFSMVALLRSQGVLQVTSTFDIAMIVV-IATAGTVFLMWLGELITEK 171
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SLII GI++G + K+ L S + + + +GL+ V I V+VTEG
Sbjct: 172 GIGNGVSLIIFAGIVSGLPSGISKLF--LTFDSTQIFTY-IGLIAVTVITIAGVVMVTEG 228
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R + + Y A R D ++P +N +G+ P++ ++ FP ++A+ L
Sbjct: 229 QRNIPVSY-----AKRIRGDKTYGGASSHLPLRVNQAGVIPIIFAMSIMLFPGMIATFL 282
>gi|240015076|ref|ZP_04721989.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae DGI18]
gi|240122148|ref|ZP_04735110.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID24-1]
Length = 416
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 160 LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGI 217
+F+ LIV RIG IP+PG D + + Y S +G + L F G+ + S F +GI
Sbjct: 1 MFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMFSGGSLERFSIFAIGI 59
Query: 218 SPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPY 277
P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA +
Sbjct: 60 MPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQ 119
Query: 278 SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYK 337
I S HV T LV G M + W+ + I+E G G G SLII GI +G + K
Sbjct: 120 GIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAK 178
Query: 338 MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDSPI 396
+++ S+ +L + G ++ + VV E RK+ + Y K R S
Sbjct: 179 LVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHYA--KRQFNGRAGSQN 234
Query: 397 TEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
T ++PF +N +G+ P + + ++ FPS L GS
Sbjct: 235 T----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS 268
>gi|116624182|ref|YP_826338.1| protein translocase subunit SecY/sec61 alpha [Candidatus Solibacter
usitatus Ellin6076]
gi|116227344|gb|ABJ86053.1| protein translocase subunit secY/sec61 alpha [Candidatus Solibacter
usitatus Ellin6076]
Length = 463
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 18/299 (6%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSV 198
++ +L A F ++R+RL T L+ + R+G IP PG + +R +++ S +GS+
Sbjct: 1 MNKLLEAFANIFRVPDLRKRLMFTLGLLAVYRLGGHIPTPGINIQRW--EEFFSSNAGSI 58
Query: 199 DELGDF--GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
D G +K L+ F LGI P I ASI++Q+L +VP+L +L+KEG G KI +
Sbjct: 59 FGFFDLFAGGNIKRLTVFALGIMPYITASIILQLLTVVVPTLEKLQKEGELGRRKITQWT 118
Query: 256 WWISLGFAILEAVIV--ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
++++ +IL++ + + I + + V +T L G + W+ + ISE
Sbjct: 119 RYLTIILSILQSFGISQGLMGMQQGI-VINPGIGFVFLTILSLTTGTAFIMWLGEQISER 177
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF--MLGLLGVFTIVTMWAVVVT 371
G G G SLII GI+ G + + + ++ W ++ L+ + V + V+V
Sbjct: 178 GVGNGMSLIIFTGIVVGLPNAIANIYQHVF--TIHDWGAITLIVLMALMVAVVAFIVLVE 235
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ +QY A + ++P +N G+ PV+ + +LAFP LA
Sbjct: 236 RGERRIPVQY-----AKRVVGRRVMGGQSTHMPLKVNAGGVIPVIFASSILAFPQTLAQ 289
>gi|402756103|ref|ZP_10858359.1| preprotein translocase subunit SecY [Acinetobacter sp. NCTC 7422]
Length = 452
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 145/292 (49%), Gaps = 24/292 (8%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAH---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLFLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI+ G L ++ Q S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAG----LPNLVIQSFTSVQNGQGSLIGLVVFGLLSLAVLAAIVFIEKAQRRIPVNY- 251
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|406977622|gb|EKD99743.1| preprotein translocase subunit SecY [uncultured bacterium]
Length = 418
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 13/283 (4%)
Query: 149 ESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAE 207
+ FKS E+R+++F + ++IVI R+ IP+PG D I Q S + +L G
Sbjct: 2 SNIFKSPELRKKIFFSLLVIVIFRVLTHIPVPGVDTTAIKQFLTSNAVFGLFDLFSGGGF 61
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S L ++P I ASI++Q+ ++PSL +L KEG G EKI Y +++ ++L+A
Sbjct: 62 SNFSIVTLSLNPYINASIILQLFTMMIPSLEELSKEGESGREKINMYTKLLTVPLSLLQA 121
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
V + L + ++V L G M + WI D ++E G G G S++I +GI
Sbjct: 122 YGV-YFLLSKQGVINGLDITRLIVLICTLTAGTMLLMWIGDLLTEYGVGNGISVLIFIGI 180
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + S + + + L L + +V V+V EG R + ++Y
Sbjct: 181 ISRLPASAVQFFSTIQSNGIFNA---LVFLAITALVIAGVVLVNEGTRNIPIEY------ 231
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R +V Y+P IN +G+ P++ ++ PS+L+
Sbjct: 232 --GRTGVKSNKVTNYLPIKINQAGVIPIIFAVSVVMIPSLLSG 272
>gi|452909973|ref|ZP_21958656.1| Preprotein translocase secY subunit [Kocuria palustris PEL]
gi|452834933|gb|EME37731.1| Preprotein translocase secY subunit [Kocuria palustris PEL]
Length = 436
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 28/344 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDEL 201
+L+ +F E+R +L T +IVI R+G F+P PG D + Q L SG V +L
Sbjct: 1 MLSAFGRAFKTPELRNKLLFTIGIIVIYRLGTFVPAPGVDYGNVQQCLALGNASGGVYDL 60
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA L++S F LG+ P I ASI++Q+L ++P +L +EG G K+ Y ++
Sbjct: 61 VNLFSGGALLQVSIFALGVMPYITASIIVQLLRVVIPRFQELHEEGPQGQAKLTQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
++G A+L A + + + + SV + + L G + W+ + I+
Sbjct: 121 TIGLALLNATTIVSLARSGQLLGDCPLPIIPNDSVLTIAIIIIALTAGTTVIMWLGERIT 180
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G SL+I I + L ++ + G+ V ++GL +V + V V
Sbjct: 181 EHGVGNGMSLLIFTSIAASFPSALGQIFNT-QGALVFGLVCLVGL-----VVIICVVFVE 234
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL--- 428
+ R+V +QY A I YIP +N +G+ P++ + +L P ++
Sbjct: 235 QSQRRVPVQY-----AKRMIGRRTIGGSTTYIPLKVNMAGVIPIIFASSMLMLPGLVTQF 289
Query: 429 -ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A GSP + I N + G P VY Y + F F
Sbjct: 290 AAPTDGSPMPGWINWI-NTYLASGDHP-VYMVTYFLLIVFFTYF 331
>gi|403050176|ref|ZP_10904660.1| preprotein translocase subunit SecY [Acinetobacter bereziniae LMG
1003]
Length = 452
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALVVF-RLGAHIPLPGIDNVALER---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 G-IGMCAGLISQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLVIQAFTSVDNGQSSLIGLAVFGLLSVAVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|227832265|ref|YP_002833972.1| preprotein translocase subunit SecY [Corynebacterium aurimucosum
ATCC 700975]
gi|262183879|ref|ZP_06043300.1| preprotein translocase subunit SecY [Corynebacterium aurimucosum
ATCC 700975]
gi|227453281|gb|ACP32034.1| preprotein translocase SecY subunit [Corynebacterium aurimucosum
ATCC 700975]
Length = 441
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 40/345 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY--LSFVSG---SVDELGD 203
++F +++R+++ T V+I++ R+G IP PG D I L+ +G SV L
Sbjct: 6 QAFKDADLRKKIIFTIVMIILYRVGAQIPSPGVDYATIAGRLRDLTEEAGNLYSVINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y +++L A
Sbjct: 66 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEQLKKEGQSGQAKMTQYTRYLTLALA 125
Query: 264 ILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L++ IVA + A + ++V + GA+ + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADREQLLGQGVRVLAEDRNFFTLIVLVITMTSGAILVMWMGELITEKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG-VFTIVTMWAVVVTEGCR 375
G SL+I GI T +L G F + L G +F +V + + +G R
Sbjct: 186 NGMSLMIFAGIATRLPTDGVNILQNNGG-----LVFAMVLAGLIFLVVGI--TFIEQGQR 238
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 239 RIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNSG 293
Query: 436 -------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ + + +P + W Y +Y F+ F
Sbjct: 294 SAGVSDNWWQRNVIAHLQSPSS------WQYIVLYFVLTIFFSYF 332
>gi|222152285|ref|YP_002561460.1| preprotein translocase subunit SecY [Streptococcus uberis 0140J]
gi|222113096|emb|CAR40475.1| preprotein translocase SecY subunit [Streptococcus uberis 0140J]
Length = 434
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 54/341 (15%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++ T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRHKILYTIFIILVFRIGTHITVPGVNAKSLEQLSDLPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFVQS 126
Query: 268 V-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ S +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + V+ ++G +L V IV + V + K+ +
Sbjct: 187 GIISSIPNAIATVHEDYFVNVKSGDVQSSYLVVGILILAVLAIV-FFTTFVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY KL A S Y+P +NP+G+ PV+ + + PS L PF+Q+
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLI-----PFFQN 291
Query: 440 ---------VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++E+LN +T G +YAF + LF+ F
Sbjct: 292 GRDIPWLTKLQELLNYQTPTG------MIVYAFLIILFSFF 326
>gi|345874165|ref|ZP_08825981.1| preprotein translocase, SecY subunit [Neisseria weaveri LMG 5135]
gi|417957271|ref|ZP_12600196.1| preprotein translocase, SecY subunit [Neisseria weaveri ATCC 51223]
gi|343968675|gb|EGV36900.1| preprotein translocase, SecY subunit [Neisseria weaveri ATCC 51223]
gi|343970810|gb|EGV38981.1| preprotein translocase, SecY subunit [Neisseria weaveri LMG 5135]
Length = 437
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 12/280 (4%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LF+ LIV RIG IP+PG D + + Y S G + L F G+ + S F +
Sbjct: 19 RVLFLLGALIVF-RIGAHIPVPGVDAAALAKLYESAGGGVLGMLNMFSGGSLERFSIFAI 77
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+ I PSL L+KEG G + I Y + ++ A+L++ VA +
Sbjct: 78 GIMPYISASIIVQLASEIFPSLKLLKKEGEAGRKIITKYTRYGTVLLALLQSFGVATFVF 137
Query: 276 PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETL 335
+ S + + T LV G M + W+ + I+E G G G SLII GI++G +
Sbjct: 138 QQGVVVTSQ-FEFYVSTIVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGVPSGI 196
Query: 336 YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDS 394
++ + S+ + ++GVF ++ +AVV E RK+ + Y ++ + +
Sbjct: 197 VQLWTLTRQGSISMLMAVSIVIGVFILI--YAVVFFESAQRKIPVHYAKRQIGNRIAQGQ 254
Query: 395 PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
++PF +N +G+ P + + ++ FPS + S GS
Sbjct: 255 -----NTHMPFKLNMAGVIPPIFASSIILFPSTIFSWFGS 289
>gi|443242445|ref|YP_007375670.1| preprotein translocase secY subunit [Nonlabens dokdonensis DSW-6]
gi|442799844|gb|AGC75649.1| preprotein translocase secY subunit [Nonlabens dokdonensis DSW-6]
Length = 444
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 164/337 (48%), Gaps = 16/337 (4%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+++N + E+R R+ +T L+++ R G I LPG D + +F G L
Sbjct: 2 KLIDNLRNIWKIEELRDRIIMTLSLLLVYRFGAQITLPGIDSTQLVGLASNFKDGIGGIL 61
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA K S F LGI P I ASI++Q++ +P L +L+KEG G +KI W++
Sbjct: 62 NAFTGGAFAKASVFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKKINQITRWLT 121
Query: 260 LGFAILEA----VIVACYSLPYSIY-AASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+G +++A + + +P S + ++++ +LV G + W+ + I++ G
Sbjct: 122 IGICLIQAPSYMLSLKTLGVPDSAFMMQDQQTLFLVLSTIILVTGCVFAMWLGEKITDKG 181
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I VGI+ + + ++ + W+ ++ ++ ++ ++ V++ G
Sbjct: 182 IGNGISLLIMVGIIATLPQAFIQEITSRVDGVGGWFLIIVEVV-IWLLIIAACVMLVMGV 240
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +Q Y + A+ E + + YIP +N SG+ P++ ++ PS + I S
Sbjct: 241 RKIPVQ-YARRSATGGYEKNAFGSRQ-YIPLKLNASGVMPIIFAQAIMFVPSAIGQIDAS 298
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W K I N T + W Y +A + +F F
Sbjct: 299 --W--AKSIGNAYTDIFGF-W-YNLTFALLIIVFTYF 329
>gi|348026038|ref|YP_004765843.1| preprotein translocase subunit secY [Megasphaera elsdenii DSM
20460]
gi|341822092|emb|CCC73016.1| preprotein translocase subunit secY [Megasphaera elsdenii DSM
20460]
Length = 420
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 148/298 (49%), Gaps = 27/298 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L N E R+R T ++ VI R+G IP+PG D +I F SG++ L
Sbjct: 1 MLENIQNVLNVPEFRKRAVFTLIMFVIFRLGVHIPVPGVDSSVIEN---LFSSGNLFGLL 57
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D GA K S + I+P I ASI+MQ+L +VP+ Q K+ +G +KI+ + +
Sbjct: 58 DLFAGGALSKFSVLAMSITPYINASIIMQLLTAVVPTFEQWAKDNQEGRDKIQKVTRYGT 117
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ A+++A ++ Y+L + S V++ + +L G + W+ D I+ G G G
Sbjct: 118 VVLALIQAFAMS-YALKVNNALIVDSWAMVVMVSLILTAGTCFLMWLGDQITAGGIGNGI 176
Query: 320 SLIICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
SLII GI+ + + T+YK + GS + + ++ +F IV + + VT+G R+
Sbjct: 177 SLIIFAGIVARFPQGCMTIYKYIQA--GSINIFQALLFAVIALFMIVVV--IEVTQGQRR 232
Query: 377 VKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
V +QY G K+ +IP +N +G+ P++ + +L FP +A
Sbjct: 233 VTVQYAKRIVGRKMYGGH---------STHIPLKVNQAGVIPIIFASSVLMFPITIAQ 281
>gi|330827903|ref|YP_004390855.1| Preprotein translocase subunit secY [Aeromonas veronii B565]
gi|406674841|ref|ZP_11082033.1| preprotein translocase subunit secY [Aeromonas veronii AMC35]
gi|423203651|ref|ZP_17190219.1| preprotein translocase subunit secY [Aeromonas veronii AER39]
gi|423211425|ref|ZP_17197958.1| preprotein translocase subunit secY [Aeromonas veronii AER397]
gi|328803039|gb|AEB48238.1| Preprotein translocase subunit secY [Aeromonas veronii B565]
gi|404612429|gb|EKB09490.1| preprotein translocase subunit secY [Aeromonas veronii AER39]
gi|404613505|gb|EKB10526.1| preprotein translocase subunit secY [Aeromonas veronii AER397]
gi|404628349|gb|EKB25131.1| preprotein translocase subunit secY [Aeromonas veronii AMC35]
Length = 442
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 25/329 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL I++ R G ++P+PG D ++ + + G++ E+ + GA +
Sbjct: 16 SELKSRLLFVLGAIIVFRAGSYVPIPGIDAAVLAELFQQ-QKGTIIEMFNMFSGGALSRA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y W +L +A+ +
Sbjct: 75 SILALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQAIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP ++ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 135 AT-GLPNMMHGLVTNPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + Q + +L L VF VT + V V G R++ + Y A
Sbjct: 194 AGLPHAIGATAEQARQGELHILLLLLLGLIVFA-VTYFVVFVERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 442
+ ++P +N +G+ P + + ++ FP + S G + Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTITSWFGQGEGKVADILQQVSM 307
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L P +P +Y +YA + F F
Sbjct: 308 VLQP-----GQP-LYEMLYAAAIIFFCFF 330
>gi|227502691|ref|ZP_03932740.1| preprotein translocase subunit SecY [Corynebacterium accolens ATCC
49725]
gi|306835262|ref|ZP_07468294.1| preprotein translocase subunit SecY [Corynebacterium accolens ATCC
49726]
gi|227076421|gb|EEI14384.1| preprotein translocase subunit SecY [Corynebacterium accolens ATCC
49725]
gi|304568855|gb|EFM44388.1| preprotein translocase subunit SecY [Corynebacterium accolens ATCC
49726]
Length = 462
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 46/346 (13%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--YLSFVSG---SVDELGD 203
++F +++R+++ T V+I+ RIG IP PG D I L+ SG SV L
Sbjct: 27 QAFKDADLRKKIIFTIVMIIAYRIGAQIPSPGVDYASIAGRLRQLTEESGDLYSVINLFS 86
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y +++L A
Sbjct: 87 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEQLKKEGQSGQAKMTQYTRYLTLALA 146
Query: 264 ILEAV-IVAC--------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L++ IVA +P + A + +++ + GA+ + W+ + I+E G
Sbjct: 147 LLQSSGIVALADREQLLGQGVP--VLAEDRNFFTLILLVVTMTSGAVLVMWMGELITEKG 204
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L Q G V F + L G+ +V + + +G
Sbjct: 205 IGNGMSLLIFAGIATRLPTDGMNIL-QNNGGMV----FAMVLAGLIVLV-VGITFIEQGQ 258
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 259 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 313
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ + + P + W Y +Y FL IF
Sbjct: 314 SSVHTPDNWWQRNVIAHLQAPSS------WQYIVLY----FLLTIF 349
>gi|410668868|ref|YP_006921239.1| preprotein translocase SecY [Thermacetogenium phaeum DSM 12270]
gi|409106615|gb|AFV12740.1| preprotein translocase SecY [Thermacetogenium phaeum DSM 12270]
Length = 424
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 157/325 (48%), Gaps = 23/325 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
E+RR++ T ++ +I RIG +P+PG + ++ + + + G D + GA +LS F
Sbjct: 12 EELRRKIGFTLLMFLIFRIGAHVPVPGINPEVLEKLFEGQLFGIFDVISG-GAFRRLSVF 70
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC- 272
+ I+P I ASI+MQ+L ++P L QL KEG G + I Y + ++ ++A+ +A
Sbjct: 71 AMSITPYINASIIMQLLTIVIPRLEQLSKEGEAGRKVIVQYTRYGTVLLGFIQAIGMAIA 130
Query: 273 -----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+P +I + + ++ A +L G + W+ + I+E G G G SLII GI
Sbjct: 131 LGRPMQGMPPAI--NNPGIGTYLMIAIILTAGTAFLMWLGEMITEKGIGNGISLIIFAGI 188
Query: 328 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
++ +L QL + +L +LG+ I + V V EG R++ +QY
Sbjct: 189 VSRLPSGAASILQQLSAGVIPITSVIILVVLGLLIIAGV--VAVNEGQRRIPVQY----- 241
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A +IP +N +G+ P++ L+ FP +A + P+ + V+ L
Sbjct: 242 AKRVMGRKVYGGQSTHIPLRVNQAGVIPIIFAMSLMLFPVQIARWIDHPWARAVESALGF 301
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
T++ + +YA + F F
Sbjct: 302 GTALNS------VLYALLIIFFTYF 320
>gi|359428612|ref|ZP_09219642.1| preprotein translocase secY subunit [Acinetobacter sp. NBRC 100985]
gi|358235798|dbj|GAB01181.1| preprotein translocase secY subunit [Acinetobacter sp. NBRC 100985]
Length = 452
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAR---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
V + C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 GVGM-CAGLISQGITLTSGLAFYIPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLTAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|297201749|ref|ZP_06919146.1| preprotein translocase, SecY subunit [Streptomyces sviceus ATCC
29083]
gi|197710876|gb|EDY54910.1| preprotein translocase, SecY subunit [Streptomyces sviceus ATCC
29083]
Length = 437
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 163/344 (47%), Gaps = 27/344 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G +P+PG + + + Q+ + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHVPIPGVNYKSV-QECVDQASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 308
+++ AIL+ + + ++++ ++ +V + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCTVASSIVPDRAIFTTIVMVITMTAGTAVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q G+ W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLADGWIEFGTVIAVGLVMVGLVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 429 ASI-LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A G+ W K + + G P +Y ++Y + F F
Sbjct: 293 AQFSSGTSSW---KTWIEANLTKGDHP-IYISLYFLLIVFFAFF 332
>gi|126658007|ref|ZP_01729159.1| protein translocase subunit SecY [Cyanothece sp. CCY0110]
gi|126620645|gb|EAZ91362.1| protein translocase subunit SecY [Cyanothece sp. CCY0110]
Length = 438
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 33/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDE 200
A E+F + + +R RL +T L+++ R G FIP+PG DR + + + V G +D
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILIRFGIFIPIPGIDRAKFVSAISNNQVLGFLDI 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G L F LGI P I ASI+MQ+L +PSL L+K EG G KI +++
Sbjct: 70 FTGGGIS-TLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVA 128
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
G+A++++ + L YA + ++ V T L G+M + W+ + I+E G G G+
Sbjct: 129 AGWAVIQSTAITVGLLRE--YALTDTIWFVPETVLALTAGSMFVMWVSELITERGIGNGA 186
Query: 320 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
SL+I V I+ TL + + +Q G +L L+ + IV + V V EG R++
Sbjct: 187 SLLIFVNIVASLPRTLGQTIDYAQTGGRQAVAQVVILLLVFLVMIVGI--VFVQEGTRRI 244
Query: 378 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-- 433
+ SA R+ E Y+P +N G+ P++ + +L P LA G
Sbjct: 245 -------PIISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLAGFFGDE 297
Query: 434 SPFWQ---HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
F Q V L P T WVY +Y+ + F+ F
Sbjct: 298 GAFSQVLIQVANALRPGT------WVYVGVYSLLILFFSYF 332
>gi|159467437|ref|XP_001691898.1| preprotein translocase secY subunit [Chlamydomonas reinhardtii]
gi|158278625|gb|EDP04388.1| preprotein translocase secY subunit [Chlamydomonas reinhardtii]
Length = 451
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 18/301 (5%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDELGDFGAE 207
+ FF S++ ++L L+++SR+G +I LPG D + S + G +D L G+
Sbjct: 35 QEFFNSDLPKKLGGLLALLLLSRVGVYIRLPGVDVDAFAESLTNSGLLGYIDTLSG-GSI 93
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 266
K+ F LGI P I ASI++Q+ P L ++ R EG G K + Y ++ FAI++
Sbjct: 94 SKVGLFSLGIIPYINASIVLQLFSAAFPGLKKMQRDEGAQGRAKFQYYQKLMAFAFAIVQ 153
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV Y P+ S V ++ LV GAM + +I DTISE G G+S++I
Sbjct: 154 AVGQLFYIRPF---VDDFSPAWVAGSSTALVAGAMALVYIADTISELKLGNGTSVLIFAN 210
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQYYGFK 385
I + L + QL+ + P + + V F + T+ + V E R++ + Y
Sbjct: 211 IAS----ALPASVGQLVAQNESDDPTNVAVFFVAFALTTLGIIYVQEAERRIPVNY---- 262
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
+ R S + Y+PF +N +G+ P++ + +LA P+ LA S + +
Sbjct: 263 ---SNRLSSGNLARQSYLPFKVNATGVMPLIFASSILALPTALARYTDSAALDEFSQSVG 319
Query: 446 P 446
P
Sbjct: 320 P 320
>gi|302536271|ref|ZP_07288613.1| preprotein translocase, SecY subunit [Streptomyces sp. C]
gi|302445166|gb|EFL16982.1| preprotein translocase, SecY subunit [Streptomyces sp. C]
Length = 437
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 148/314 (47%), Gaps = 38/314 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG + V VD++G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLYRLGSHIPVPGVSYK--------NVQICVDQMG 52
Query: 203 D------------FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 250
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G K
Sbjct: 53 SSNSLFGLVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPKLENLKKEGQSGTAK 112
Query: 251 IKSYIWWISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAM 301
I Y ++++ AIL+ + + +++ +HS+ + + G
Sbjct: 113 ITQYTRYLTVALAILQGTGLVATARTGALFGTCPVAREIVPNHSIFTTITMVLTMTAGTC 172
Query: 302 TMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVF 360
+ W+ + I++ G G G S+++ + I G+ L+ + +L G W F + +L
Sbjct: 173 VVMWLGELITDRGIGNGMSILMFISIAAGFVGALWTI--KLQGKIADGWVEFAVVILVGL 230
Query: 361 TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 420
+V + V V + R++ +QY + A + YIP +N +G+ PV+ +
Sbjct: 231 AMVAL-VVFVEQAQRRIPVQYAKRMIGRRAYGGT-----STYIPLKVNQAGVIPVIFASS 284
Query: 421 LLAFPSILASILGS 434
LL P+++ GS
Sbjct: 285 LLYIPALIVQFSGS 298
>gi|172038946|ref|YP_001805447.1| preprotein translocase subunit SecY [Cyanothece sp. ATCC 51142]
gi|354552765|ref|ZP_08972073.1| preprotein translocase, SecY subunit [Cyanothece sp. ATCC 51472]
gi|171700400|gb|ACB53381.1| preprotein translocase SecY subunit [Cyanothece sp. ATCC 51142]
gi|353556087|gb|EHC25475.1| preprotein translocase, SecY subunit [Cyanothece sp. ATCC 51472]
Length = 438
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 162/341 (47%), Gaps = 33/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDE 200
A E+F + + +R RL +T L+++ R G FIP+PG DR + + + V G +D
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILIRFGIFIPIPGIDRAKFVSAISNNQVLGFLDI 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G L F LGI P I ASI+MQ+L +PSL L+K EG G KI +++
Sbjct: 70 FTGGGIS-TLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVA 128
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
G+A++++ + L YA + ++ V T L G+M + W+ + I+E G G G+
Sbjct: 129 AGWAVIQSTAITVGLLRE--YALTDTIWFVPETVLALTAGSMFVMWVSELITERGIGNGA 186
Query: 320 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
SL+I V I+ TL + + +Q G +L L+ + IV + V V EG R++
Sbjct: 187 SLLIFVNIVASLPRTLGQTIDYAQTGGRQAVAQVVILLLVFLVMIVGI--VFVQEGTRRI 244
Query: 378 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-- 433
+ SA R+ E Y+P +N G+ P++ + +L P LA G
Sbjct: 245 -------PIISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLAGFFGDE 297
Query: 434 ---SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S V L P T WVY +Y+ + F+ F
Sbjct: 298 GQFSQILIQVANALRPGT------WVYVGVYSLLILFFSYF 332
>gi|262370558|ref|ZP_06063883.1| secretion protein [Acinetobacter johnsonii SH046]
gi|381197889|ref|ZP_09905228.1| preprotein translocase subunit SecY [Acinetobacter lwoffii WJ10621]
gi|262314358|gb|EEY95400.1| secretion protein [Acinetobacter johnsonii SH046]
Length = 452
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IP+PG + + ++ + G++ LG F GA
Sbjct: 23 YREIIRRMMFLIGALLVF-RLGAHIPVPGINNAAL-ENLFNANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLFLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 A-IGMCAGLISQGITLTAGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L ++ Q + S ++GL+ GV ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLILQSISSVDNGQTSLIGLVIFGVLSLAVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRVFTAQQSHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|157363462|ref|YP_001470229.1| preprotein translocase subunit SecY [Thermotoga lettingae TMO]
gi|157314066|gb|ABV33165.1| preprotein translocase, SecY subunit [Thermotoga lettingae TMO]
Length = 429
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 163/338 (48%), Gaps = 33/338 (9%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
A ++ FK E+R R+ T +++ R+G +IP+PG + + + + F + + F
Sbjct: 3 KALQNAFKIPELRNRILFTVATLIVFRLGIYIPIPGINIQAWGEAFKRFGESAAGGILSF 62
Query: 205 ------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA S F + ++P I ASI++Q+L ++P L L +EG +G +K Y +
Sbjct: 63 YDVFTGGALENFSIFAMSVTPYINASIVLQLLSSVIPKLRDLLREGEEGRKKFAQYTRNL 122
Query: 259 SLGFAILEAVIVACYSL----PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++ ++ IV+ +SL P + + M++ ++ G M + W+ D I+E G
Sbjct: 123 TVILGAFQSFIVS-FSLVRQNPDIVSYGLNPFAFTMISTISMLAGTMFLLWLGDRITERG 181
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 373
G G S++I GI+ Y ++L L ++ W F++ V ++VT+ +V V +
Sbjct: 182 IGNGISILIFAGIVARYPNYFGRILLGRL--NIFGWIFLI----VVSLVTIAGIVYVQQA 235
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY AS YIP +N G+ P++ + ++ P+ +A + G
Sbjct: 236 ERRINIQY-----ASRVTGRRIYGGASTYIPVKVNQGGVIPIIFASAIIMIPAAIAQMAG 290
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W+ ++ IL P + +Y IY VF F F
Sbjct: 291 ---WETLRRILGPGS------LLYVVIYGLLVFFFTYF 319
>gi|210631173|ref|ZP_03296784.1| hypothetical protein COLSTE_00669 [Collinsella stercoris DSM 13279]
gi|210160140|gb|EEA91111.1| preprotein translocase, SecY subunit [Collinsella stercoris DSM
13279]
Length = 428
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 20/307 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----FVSGSV 198
+L +F E+R ++ T ++V+ RIG +P+PG + + + S F SG++
Sbjct: 1 MLTGLKNTFRIKELRGKILFTIAMLVVYRIGAHVPVPGIPFQGMSALFTSAGDTFASGAM 60
Query: 199 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L F GA +S F LGI P I +SI+MQ+L +VPSL +L +EG G KI Y
Sbjct: 61 ALLNLFSGGALSYVSVFSLGIMPYITSSIVMQMLQAVVPSLHELAREGEVGQTKITQYSR 120
Query: 257 WISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+++L A+L +V + + + ++ A + +M+ L GAM + WI + I++
Sbjct: 121 YLTLALALLNSVGYLFLFKSFGIQFTGAEAPEVIFDIMIVG-TLTAGAMLIMWIGELITQ 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SLII I+ G + + + + G SV ++ +L + ++ + V +
Sbjct: 180 RGIGNGMSLIIFANIMAGLPQAIIQSMD---GGSVAIITTLVVVLVILCVIP-FIVYLER 235
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
G R++ +QY A + Y+P +N +G+ P++ + LL FP+ LA
Sbjct: 236 GQRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVVPIIFASALLYFPAQLAVFF 290
Query: 433 GSPFWQH 439
+ W
Sbjct: 291 PNVGWMQ 297
>gi|118591161|ref|ZP_01548560.1| protein translocase subunit SecY [Stappia aggregata IAM 12614]
gi|118436237|gb|EAV42879.1| protein translocase subunit SecY [Stappia aggregata IAM 12614]
Length = 443
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 21/300 (7%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L+S LN +A F K+E +++R++ T +++ R+G +IPLPG + Q + SG
Sbjct: 7 QLASNLNFSA--FAKAEELKKRIWFTLGALLVYRLGTYIPLPGINPDAFAQAFNQAQSGI 64
Query: 198 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+ F GA +++ F LGI P I ASI+MQ++ +VPSL QL+KEG G + I Y
Sbjct: 65 IGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPSLEQLKKEGEQGRKVINQYT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTI 310
+ ++ A +A Y + + A++ V T LV G M + W+ + I
Sbjct: 125 RYGTVILAAFQA-----YGIAVGLEGAANVVADPGWFFRASTVLTLVGGTMFLMWLGEQI 179
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
+ G G G SLII GI+ G L +L +L +LG+L + +V V +
Sbjct: 180 TSRGIGNGISLIIFAGIVAGLPVALVNVL-ELGRQGSMSTVLILGILILAVVVIALIVFM 238
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R++ +QY ++ + E + ++P +N +G+ P + + LL P+ +
Sbjct: 239 ERAQRRLLIQYPKRQMGNRMFEGN-----TSFLPLKLNTAGVIPPIFASSLLLVPATIGG 293
>gi|260432468|ref|ZP_05786439.1| preprotein translocase, SecY subunit [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416296|gb|EEX09555.1| preprotein translocase, SecY subunit [Silicibacter lacuscaerulensis
ITI-1157]
Length = 454
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 136/279 (48%), Gaps = 19/279 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++R R+ T L+++ R+G FIP+PG D Q F+ + +G GA
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTFIPVPGIDG----QALREFMEQAGQGIGGMVSMFTGGAL 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A ++A
Sbjct: 77 GRMGIFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKINQYTRFGTVALATVQA 136
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A SL A + + T LV G M + W+ + I+ G G G SLII VGI
Sbjct: 137 YGLAV-SLESGDLATDPGLYFRLSTMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGI 195
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKL 386
+ L + L+ G S P ++ + V I + VV E RK+ +QY +
Sbjct: 196 IAEVPAALAQFLAS--GRSGAISPAVIVGVIVMVIAVITFVVFMERALRKIHIQYPRRNV 253
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
E ++P +NP+G+ P + + LL P
Sbjct: 254 GMKVYEGG-----SSHLPVKVNPAGVIPAIFASSLLLLP 287
>gi|342214831|ref|ZP_08707502.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
780 str. F0422]
gi|341590362|gb|EGS33605.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
780 str. F0422]
Length = 420
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 33/332 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E+R ++ T ++ ++ R+G IP+PG + +I F SG++ L D GA K
Sbjct: 12 TELRNKVVYTLLMFIVFRLGIHIPVPGVEASVIES---LFTSGNLFGLLDLFAGGALSKF 68
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAV 268
S F + I+P I ASI+MQ+L +VP+ K+G +G +KI + + LGF
Sbjct: 69 SIFAMSITPYINASIIMQLLGAVVPTFEAWSKDGEEGRKKIAKVTRYGTVILGF------ 122
Query: 269 IVACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+ + + Y++ A++ +S V++ + +L G + W+ + I+ G G G SLII
Sbjct: 123 -IQAFGMTYALRASNALIDNSFMSVILISIILTAGTCFLMWVGEQITAHGIGNGISLIIF 181
Query: 325 VGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
GI+ + +T+Y+ L +G+ + + ++ V IV + A VT+G R++ +QY
Sbjct: 182 AGIVARFPDGVQTIYQYLQ--VGTINVFQAILFAIIAVAMIVLVIA--VTQGQRRIPIQY 237
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
A ++P +N +G+ P++ + +L FP+ LA + P+ Q V
Sbjct: 238 -----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSILMFPATLAQFVQVPWVQTVA 292
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIFDI 473
T + + +Y + FF + + I
Sbjct: 293 SYFQWGTPI--QTILYAVLILFFTYFYTAISI 322
>gi|403225195|gb|AFR24807.1| preprotein translocase subunit [uncultured Pelagomonas]
Length = 410
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 25/276 (9%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSGSVDELGDFGAE 207
+ + R+ +T +I+ +R+G FIPL G D++ + + L+F S S + GDF
Sbjct: 13 RDNLVNRILLTLGIILFARLGTFIPLTGIDQKYLYTELQNSPILNFFS-SFSQ-GDF--- 67
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILE 266
L F LGI P I ASI MQ+L ++P L +L+KE G+ G +K+ Y ++++ A +
Sbjct: 68 FVLGPFTLGILPNINASISMQLLTAVLPFLQKLQKEEGVTGQKKVTQYTRYLTVVIAFIY 127
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
++A + P+ + V+ V + A L G++ + W+ + I+E G G G+SL I V
Sbjct: 128 GCLIAFFLKPFVF--GWNLVRAVEI-ALTLTTGSIIILWLSELITEKGIGNGTSLFIFVN 184
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I + +TL V P LG+ +F I + VVV RK+ L +
Sbjct: 185 ISSALPKTLNNF-----AVLVPTLPLKLGIGFIFAIGLLSIVVVQGALRKIDL----LSV 235
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 422
S RE S Y+PF +NPSG+ P++ ++ LL
Sbjct: 236 KSLLRESS--NSQSSYLPFRLNPSGIMPLIFSSGLL 269
>gi|398993736|ref|ZP_10696674.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM21]
gi|398134079|gb|EJM23254.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM21]
Length = 442
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y ++++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYLTVALALVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + S V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVSFTGDFSFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFSGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 291
>gi|346991281|ref|ZP_08859353.1| preprotein translocase subunit SecY [Ruegeria sp. TW15]
Length = 454
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 15/277 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+++R R+ T L+++ R+G FIP+PG D R + Q G + + GA +
Sbjct: 21 TDLRNRILFTLALLIVYRLGTFIPVPGIDGAALREFMEQAGQGI--GGMISMFTGGALGR 78
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A ++A
Sbjct: 79 MGIFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKINQYTRFGTVALATVQAYG 138
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+A SL A + M T LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLESGDLATDPGLFFRMSTMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIA 197
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
L + + G S P ++ + + I + VV E RK+ +QY +
Sbjct: 198 EVPAALAQFFAS--GRSGAISPAVIVGVIIMVIAVITFVVFMERALRKIHIQYPRRQAGM 255
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
E ++P +NP+G+ P + + LL P
Sbjct: 256 KVYEGG-----SSHLPVKVNPAGVIPAIFASSLLLLP 287
>gi|306832567|ref|ZP_07465707.1| preprotein translocase subunit SecY [Streptococcus bovis ATCC
700338]
gi|336063433|ref|YP_004558292.1| preprotein translocase subunit SecY [Streptococcus pasteurianus
ATCC 43144]
gi|304425325|gb|EFM28451.1| preprotein translocase subunit SecY [Streptococcus bovis ATCC
700338]
gi|334281633|dbj|BAK29206.1| preprotein translocase SecY subunit [Streptococcus pasteurianus
ATCC 43144]
Length = 434
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 168/340 (49%), Gaps = 50/340 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFVQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ +I ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSNISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILT---GYTETLYKML------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GI++ T+Y+ S LL S + F+ L+ + + V +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLLSSYI----FVALLVVAVLAIVFFTTFVQQAEY 241
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
K+ +QY KL A S Y+P INP+G+ PV+ + + PS + ++ +
Sbjct: 242 KIPIQYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNG 292
Query: 435 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++ LN +T G +YA + LF+ F
Sbjct: 293 KDIPWLTTLESFLNYQTPSGM------VVYAVLIILFSFF 326
>gi|225849527|ref|YP_002729692.1| preprotein translocase subunit SecY [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644157|gb|ACN99207.1| preprotein translocase, SecY subunit [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 429
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 164/329 (49%), Gaps = 27/329 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
E+R R+ T +++ + R+G IP+PG + ++ Y + G++ + + GA +
Sbjct: 12 KELRSRIAFTLIILAVYRLGTHIPVPGVNSEML-MHYFNSAGGALFNIYNLFSGGALGRF 70
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 269
S F LG+ P I ASI+MQ+L ++P+L +L+KE D G KI Y ++++ A +++
Sbjct: 71 SVFALGVMPYISASIIMQLLTAVIPTLERLQKEEGDYGRWKISQYTRYLTIAIASFQSLG 130
Query: 270 VACYSLPYSIYAASHSVK-----HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ + + + + V++T ++ G + + W+ + I+E G G G S+II
Sbjct: 131 LSIWLTTLKTESGASLISLSPFTFVILTTVIVTTGTVLLMWLGEKITEFGIGNGISMIIL 190
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ G + + +L+ V + L + V V + E R++ +QY
Sbjct: 191 SGIVAGIVPAILRT-YELVKVGVISILLLTVALVIIVAVIAGIVYIQEAERRIPIQY--- 246
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKE 442
AR + I++ Y+PF +NPSG+ P++ +L FP+ +A S + + +
Sbjct: 247 -----ARRNIMISQSASYLPFKLNPSGVIPIIFAVAILMFPATIAQFFANKSEIARMIVD 301
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P++ +VY+ +Y + F F
Sbjct: 302 YLSPQS------YVYFGLYVALIIFFAYF 324
>gi|407693279|ref|YP_006818068.1| preprotein translocase subunit SecY [Actinobacillus suis H91-0380]
gi|407389336|gb|AFU19829.1| preprotein translocase subunit SecY [Actinobacillus suis H91-0380]
Length = 440
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 138/276 (50%), Gaps = 18/276 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIVQLLTAIHPPLAELKKEGEAGRRKISKYTRYATLLLAFIQSIGISI-AL 138
Query: 276 PYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + + S+ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVADLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
T+ + + Q + P +L L+ V VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARQGEIS--PLVLLLVAVIAFAVTYFVVFVERGQRRIVVNY-------ASRQ 249
Query: 393 DSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 250 QGRMMAPARSSHLPLKVNMAGVIPAIFASSIILFPA 285
>gi|294101648|ref|YP_003553506.1| preprotein translocase subunit SecY [Aminobacterium colombiense DSM
12261]
gi|293616628|gb|ADE56782.1| preprotein translocase, SecY subunit [Aminobacterium colombiense
DSM 12261]
Length = 432
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 21/333 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR----RLIPQDYLSFVSGSV 198
+L++ ++F +++RR+ T ++ I R+G IP PG D RL Q + V G +
Sbjct: 1 MLDSFRDAFKLPDLKRRILFTLGVLFIFRLGAHIPTPGIDTAAMARLFEQG--AGVLGFL 58
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
D GA + F LG++P I +SI+ Q+L + P+L +++KE DG +KI + W
Sbjct: 59 DIFAG-GALRRFGIFALGVTPYINSSIVFQLLVVVFPALEKMQKESEDGRKKIIQFTRWG 117
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ FA ++AV + + I+ S + ++ + GA+T+ W+ + I++ G G G
Sbjct: 118 TILFAGIQAVGMTFWLGRLGIF--SGGLFAGLIVVLTVTAGAVTVMWLGEEITDHGIGNG 175
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I GI+ E + + L + +L + G+ +V +++ EG R++
Sbjct: 176 ISLLIFAGIVARIPEAILRSWQMLRLGEMNILVLILAI-GLMFVVIAGCILLQEGQRRLP 234
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY A + +IP +N +G+ P++ + +L FP +A
Sbjct: 235 VQY-----AKRVVGNKVYGGQSTFIPLKVNQAGVMPIIFASSVLLFPYSIARFFTGNIAT 289
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V+++ P + VY +Y + F F
Sbjct: 290 MVQKMFEPGSV------VYIVLYISLIIFFAYF 316
>gi|262373501|ref|ZP_06066779.1| preprotein translocase, SecY subunit [Acinetobacter junii SH205]
gi|262311254|gb|EEY92340.1| preprotein translocase, SecY subunit [Acinetobacter junii SH205]
Length = 452
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAR---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRYGTLFLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GVGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGF 384
GI+ G + + + + + + L + G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAGLPNLVIQSFTTV--QNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY--- 251
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 --AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|242620057|ref|YP_003002061.1| preprotein translocase subunit secY [Aureococcus anophagefferens]
gi|239997302|gb|ACS36825.1| preprotein translocase subunit secY [Aureococcus anophagefferens]
Length = 410
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 154/288 (53%), Gaps = 33/288 (11%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSGSV 198
L N ++S + + R+ +T +I+ +R G FIP+PG D+ + ++ L+F S S
Sbjct: 6 LGNESKS--RKNLVNRILLTLGIILFARFGTFIPIPGIDQNYLYKELQNSPILNFFS-SF 62
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWW 257
+ GDF L F LGI P I ASI MQ+L I P+L +L+KE G+ G +K Y+ +
Sbjct: 63 SQ-GDF---FVLGPFTLGILPNINASITMQLLTSISPALQKLQKEEGVAGQKKSTQYVRY 118
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+++ A + +I+A + P+ ++ + A L G++ + W+ + I+E G G
Sbjct: 119 VTVLIAFIYGLIIAFFLKPF---VFGWNLVQALQIAVTLTTGSVIILWLSELITEKGIGN 175
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI--VTMWAVVVTEGC- 374
G+SL I V I + +TL +SV P ++ LG+ I V + ++++ +G
Sbjct: 176 GTSLFIFVNISSALPKTLSNF------NSVA--PSLISKLGIGFIFFVGLVSIIIVQGAL 227
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 422
RK++L + S RE + + Y+PF +NPSG+ P++ ++ LL
Sbjct: 228 RKIEL----LSVKSLLREST--NKQSSYLPFRLNPSGIMPLIFSSGLL 269
>gi|169335649|ref|ZP_02862842.1| hypothetical protein ANASTE_02069 [Anaerofustis stercorihominis DSM
17244]
gi|169258387|gb|EDS72353.1| preprotein translocase, SecY subunit [Anaerofustis stercorihominis
DSM 17244]
Length = 418
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 152/326 (46%), Gaps = 30/326 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 206
E+R+R+ T ++ I R+G FI +P D + L+ +SG+ +F
Sbjct: 13 ELRKRILFTLAMLCIFRLGGFIAVPFIDTAAVDTMVNNNSMFGLLNIISGN-----NF-- 65
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F + I+P I ASI++Q+L +P+L +L EG +G +KI SY ++++ A+++
Sbjct: 66 -RTFSIFAMSITPYINASIILQLLTIAIPALERLSHEGEEGRKKISSYTRYLTVVLALIQ 124
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A+ +A + + S V V A + G + W+ + I+E G G G S++I G
Sbjct: 125 ALGIA---FSFKQILTTDSAFTVAVVALTITAGTSFLMWLGENITEHGIGNGISILIFAG 181
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFK 385
I+ L + Q+ S+ +L + VF I+ + VV + EG RK+ +QY
Sbjct: 182 IIANIPSALGYLYEQVTSGSIT--GVLLVIFLVFVILVIAGVVEINEGVRKIPVQY---- 235
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A +IP IN SG+ P++ + + FP+ LAS P W +
Sbjct: 236 -AKRVVGRKMYGGQNTHIPLKINQSGVMPIIFASTITMFPATLASFF--PNWGFAAWLSK 292
Query: 446 PETSVGARPWVYYTIY-AFFVFLFNI 470
GA + Y I FF + + I
Sbjct: 293 SLAWGGAASTILYVILIVFFTYFYTI 318
>gi|20808641|ref|NP_623812.1| preprotein translocase subunit SecY [Thermoanaerobacter
tengcongensis MB4]
gi|20517275|gb|AAM25416.1| Preprotein translocase subunit SecY [Thermoanaerobacter
tengcongensis MB4]
Length = 418
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 26/298 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
+IRRR+ T ++VI R+G IP+PG D + I + G G F GA
Sbjct: 12 DDIRRRILYTLGMLVIFRLGSHIPVPGIDPKQIAN-----ILGQGQLFGFFDIISGGAFR 66
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ F + I P I ASI+MQ+L +PSL QL KEG +G +KI Y ++++ A+++A+
Sbjct: 67 NFTIFAMSIVPYINASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 269 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ I + +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLRSAVINPTFFRLTVIVIT---LTAGTTFLMWLGERITENGLGNGSSLIIFAGII 183
Query: 329 TGYTETLYKMLSQLLGSSVRWW---PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
+ +Y + + + F++ L I+ + ++ TEG R++ +QY
Sbjct: 184 SRIPNMIYLTHEYIKAGTSNIFGAIAFVVAEL----IMIVLIILATEGQRRIPVQY---- 235
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKE 442
A +IP IN +G+ P++ LL FP LA+ S F+ V++
Sbjct: 236 -AKRVVGRRVYGGQSTHIPIRINMAGVIPIIFAISLLQFPQQLATFFPHSSFYNFVQK 292
>gi|315127936|ref|YP_004069939.1| preprotein translocase subunit SecY [Pseudoalteromonas sp. SM9913]
gi|359439527|ref|ZP_09229479.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20311]
gi|359446515|ref|ZP_09236181.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20439]
gi|392557094|ref|ZP_10304231.1| preprotein translocase subunit SecY [Pseudoalteromonas undina NCIMB
2128]
gi|315016450|gb|ADT69788.1| preprotein translocase, membrane component, transport across inner
membrane (general secretory pathway) [Pseudoalteromonas
sp. SM9913]
gi|358025770|dbj|GAA65728.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20311]
gi|358039615|dbj|GAA72430.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20439]
Length = 442
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMNGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + + ++ + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLNVFVLLMVAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + ++ FP +AS G
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|310659482|ref|YP_003937203.1| preprotein translocase membrane subunit [[Clostridium] sticklandii]
gi|308826260|emb|CBH22298.1| preprotein translocase membrane subunit [[Clostridium] sticklandii]
Length = 424
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 163/331 (49%), Gaps = 23/331 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--SVDELGDFGAELKLSF 212
++R++L T +++V+ RIG IP+PG + +I Q +S +G S ++ GA +
Sbjct: 13 DLRKKLVFTFLMLVVFRIGTAIPVPGINVDVIKQ-MISQQAGILSFYDIVAGGAFSNFTI 71
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
F L I+P I +SI++Q+L +P+L ++K G +G +KI Y ++++ A+++A +
Sbjct: 72 FALSITPYITSSIVIQLLTVAIPALEDMQKSGEEGRKKILQYTRYLTVVLALIQATAIGI 131
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
++ S S+ + L G + W+ + I+E G G G SL+I GI++
Sbjct: 132 GFFNSAL--VSDSILSKISVVLTLTAGTAFLMWLGEQITEKGIGNGISLLIFAGIVSRIP 189
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKLAS 388
+ + + + + +GVF I+++ +V V +G RK+ +QY A
Sbjct: 190 QATVQTFELVKSGELNFIQ-----VGVFLIISVAIIVGVILVLQGVRKIPVQY-----AK 239
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+IP +N +G+ PV+ LLAFP L + +P +Q ++
Sbjct: 240 RVVGRKTYGGQSTHIPLKVNQAGVIPVIFAVSLLAFPQTLGIFIKNPEYQ---AFVSKWF 296
Query: 449 SVGARPWVY-YTIYAFFVFLFNIFDIVSILY 478
+ P +Y YT+ F + +F + +SI +
Sbjct: 297 TASGNPGIYVYTLMEFLLVVFFTYFYISITF 327
>gi|88861474|ref|ZP_01136100.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
tunicata D2]
gi|88816522|gb|EAR26351.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
tunicata D2]
Length = 442
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 27/293 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYATLVLATVQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-GLPNMMQGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 381
L +GS+ ML ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTAEMARQGDLNVLMLLVIAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|153004793|ref|YP_001379118.1| preprotein translocase subunit SecY [Anaeromyxobacter sp. Fw109-5]
gi|152028366|gb|ABS26134.1| preprotein translocase, SecY subunit [Anaeromyxobacter sp. Fw109-5]
Length = 445
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 36/337 (10%)
Query: 150 SFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---G 205
+ FK +E+R+RL T ++ + R+G ++ PG DR+ + Q+ +S SG++ L +F G
Sbjct: 8 NIFKIAELRKRLLFTLGMLAVYRLGIYVTTPGVDRQAM-QNVVS--SGNLLGLLNFFSGG 64
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A +LS F LGI P + ASI++Q+L +VP+L +L+KEG G KI Y ++++ A +
Sbjct: 65 AFEQLSIFALGIMPYVSASIILQLLTVVVPALEKLQKEGELGRRKITQYTRYLTVVLAAI 124
Query: 266 EAVIVACY----SLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+ +A Y P + A+ ++T L G + W+ + I+E G G G S
Sbjct: 125 QGYGIATYLETLRDPSGLSVVANPGWGFRLLTMISLAAGTSFIMWMGEQITERGVGNGIS 184
Query: 321 LIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
LII GI+ + GS + ++ LLG+ +V V V G R++
Sbjct: 185 LIIFAGIVARAPSAAWATFQGFRAPGSQMSELGLVI-LLGIMIVVIGAIVFVERGQRRIP 243
Query: 379 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY G KL ++P +N +G+ P + + LL FP+ L
Sbjct: 244 IQYAKRVVGRKLYGGQ---------STHLPLKVNTAGVIPPIFASSLLMFPATLGG---- 290
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W + + ++ A W+Y +Y + F F
Sbjct: 291 --W--IPALSQLSNALQAGSWIYNVLYIALIVFFAYF 323
>gi|154505149|ref|ZP_02041887.1| hypothetical protein RUMGNA_02662 [Ruminococcus gnavus ATCC 29149]
gi|336433144|ref|ZP_08612970.1| preprotein translocase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794628|gb|EDN77048.1| preprotein translocase, SecY subunit [Ruminococcus gnavus ATCC
29149]
gi|336017106|gb|EGN46874.1| preprotein translocase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 443
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 150/296 (50%), Gaps = 10/296 (3%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L ++F +IR+RLF T +++++ R G +P PG D I S +G+
Sbjct: 1 MLKTVRKAFQIEDIRKRLFYTFLMLIVVRFGSQLPTPGVDPTYIQNLLASQNNGAYSFFD 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F G+ ++S F L I+P I +SI+MQ+L +P L +++KEG +G +KI + ++++
Sbjct: 61 AFTGGSFTRMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGAEGRKKIAAITRYVTV 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
A++E++ ++ + + V +V + L G+ + WI + I+E G G G S
Sbjct: 121 ALALIESIAMSIGFGRQGLLEEFNFV-NVAIVVCTLTAGSAFLMWIGERITEKGVGNGIS 179
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFM--LGLLGVFTIVTMWAVVVTEGCRKVK 378
+++ + IL+ + +Q + M + +L + V ++ +++ +G R++
Sbjct: 180 IVLLINILSRVPNDFVTLYTQFIKGKTLAKGAMAAIIILAILLAVVLFVIILQDGERRIA 239
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY + + +IP +N SG+ PV+ + L+ FP ++A LG
Sbjct: 240 VQY-----SQKVQGRRTYGGKATHIPLKVNTSGVIPVIFASSLMQFPIVIAQFLGK 290
>gi|424741403|ref|ZP_18169756.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-141]
gi|422944792|gb|EKU39769.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-141]
Length = 452
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLESLKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S ++ + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I++G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVSG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSVGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|25027120|ref|NP_737174.1| preprotein translocase subunit SecY [Corynebacterium efficiens
YS-314]
gi|23492400|dbj|BAC17374.1| preprotein translocase SecY [Corynebacterium efficiens YS-314]
Length = 440
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 43/353 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++ T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKILFTIAMIVLYRIGAQIPSPGVDYASISGRLRDLTQDQSSVYS--LINL 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y +++L
Sbjct: 64 FSGGALLQLSIFAIGIMPFITASIIVQLLTVVIPHFEQLKKEGQSGQTKMTQYTRYLTLA 123
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ + + + A V + +++ + GA+ + W+ + I+E G
Sbjct: 124 LALLQSAGIVALADREQLLGAGIRVLNEDRDFFDLLILVITMTAGAILVMWLGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L G + I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVVFAVVLVSV------LILVIGVVFVEQGQ 237
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+WQ + + P + W Y +Y F+ F VS+ Y
Sbjct: 293 GSLEVTDNWWQRNVIAHLQTPSS------WQYIVLYFALTIFFSYF-YVSVQY 338
>gi|357039729|ref|ZP_09101521.1| preprotein translocase, SecY subunit [Desulfotomaculum gibsoniae
DSM 7213]
gi|355357535|gb|EHG05308.1| preprotein translocase, SecY subunit [Desulfotomaculum gibsoniae
DSM 7213]
Length = 425
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 14/294 (4%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVS 195
++ +L+ +F SE+R +L T +I I R+G IP+PG D R LI +
Sbjct: 1 MAQLLDGLKGAFKVSELRTKLLFTLSMIFIFRVGAHIPVPGVDVDAFRELIGTA--GIIL 58
Query: 196 GSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
G D + GA S F + I P I ASI+MQ+L ++P L +L KEG +G +KI Y
Sbjct: 59 GFFDVISG-GAFKSFSVFAMSIIPYINASIIMQLLTVVIPHLERLAKEGEEGRKKITQYT 117
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
+ ++ A L+A+ ++ Y + + + ++ F L G + WI + I+E G
Sbjct: 118 RYFTVMLAFLQAIGMSVMMGNYGVLHNPGFISYAVIV-FTLTAGTTLLMWIGEQITERGI 176
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G SL+I GI++ + + QL ++ ++ L+ + +V V V EG R
Sbjct: 177 GNGISLLIFAGIVSRLPSGIQNLYLQLEAGTINVLSLLI-LVVIGALVIAAVVAVQEGQR 235
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
++ +QY K R T ++P +N +G+ PV+ + LL FP +A
Sbjct: 236 RIPVQYA--KRVVGRRVYGGQTT---HLPLKVNQAGVIPVIFASSLLMFPEQIA 284
>gi|299768686|ref|YP_003730712.1| preprotein translocase subunit SecY [Acinetobacter oleivorans DR1]
gi|298698774|gb|ADI89339.1| preprotein translocase subunit SecY [Acinetobacter oleivorans DR1]
Length = 452
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S ++ + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I++G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVSG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSVGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|227499175|ref|ZP_03929310.1| preprotein translocase subunit secY [Acidaminococcus sp. D21]
gi|226904622|gb|EEH90540.1| preprotein translocase subunit secY [Acidaminococcus sp. D21]
Length = 418
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 26/336 (7%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
++S L+N ++ +E+R++L T + ++ R G IP+PG + +I Q F +G++
Sbjct: 1 MASALDNLMQA---TELRKKLSFTLAMFIVFRAGTQIPVPGVNAAMIEQ---LFNNGNLF 54
Query: 200 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L D GA K S F + I+P I ASI+ Q+L ++P+L + KEG +G +KI
Sbjct: 55 GLLDLFSGGALSKFSIFAMSITPYINASIITQLLTVVIPTLEEWSKEGAEGAKKINKINR 114
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+ ++ +++A+ +A Y L ++ + +V + L G + + WI + I+ G G
Sbjct: 115 YAAVVLGVIQAIGMA-YGLRVAVNNPTFFSYLTIVVS--LTAGTILLMWIGEQITARGIG 171
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVVTEGCR 375
G SLII GI++ + M L ++ + ++ +L V + M+ V +T R
Sbjct: 172 NGISLIIFAGIISRLPSGMAVMYRYLQAGTINIFNLLIFAVLAVLMV--MFVVAITVAYR 229
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
K+ +QY A YIP +N +G+ P++ + +L FP +A + P
Sbjct: 230 KIPVQY-----AKRVVGRKMYGGHTTYIPLKVNQAGVMPIIFASSVLMFPVTIAQFIQVP 284
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q V L T + T+Y + F F
Sbjct: 285 WVQKVASYLQWGTPLQT------TLYVLLILFFTYF 314
>gi|422510186|ref|ZP_16586334.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA1]
gi|313816548|gb|EFS54262.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA1]
Length = 439
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 44/351 (12%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 310
+++L +L+A + ++ S SV V+V + G + W+ + I
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI 180
Query: 311 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
++ G G G S++I I + ++L+ K+ G + W F+ ++ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAW--FIFSMVIAIGLAVMAAV 238
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V + +G R++ QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPGQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF 471
A+ P+TS A W+ Y+T +Y FL IF
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIAYFLLIIF 329
>gi|329117198|ref|ZP_08245915.1| preprotein translocase, SecY subunit [Streptococcus parauberis NCFD
2020]
gi|333904317|ref|YP_004478188.1| preprotein translocase subunit SecY [Streptococcus parauberis KCTC
11537]
gi|326907603|gb|EGE54517.1| preprotein translocase, SecY subunit [Streptococcus parauberis NCFD
2020]
gi|333119582|gb|AEF24516.1| preprotein translocase SecY subunit [Streptococcus parauberis KCTC
11537]
gi|456369949|gb|EMF48848.1| Preprotein translocase secY subunit [Streptococcus parauberis
KRS-02109]
gi|457093865|gb|EMG24426.1| Preprotein translocase secY subunit [Streptococcus parauberis
KRS-02083]
Length = 434
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRTKVFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLFLAFVQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + ++K ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVNTPNIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + + ++GL L V IV + V + K+ +
Sbjct: 187 GIISSIPNAIATIHEDYFVNVRPGEINMSYIIVGLIILAVLAIV-FFTTYVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + P
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFFQNGKDIP 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++E+LN +T G +YAF + LF+ F
Sbjct: 297 WLTKLQEVLNYQTPTGMM------VYAFLIILFSFF 326
>gi|325294416|ref|YP_004280930.1| preprotein translocase subunit SecY [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064864|gb|ADY72871.1| preprotein translocase, SecY subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 442
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 155/343 (45%), Gaps = 25/343 (7%)
Query: 138 IRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+ LS + N E E+R+R T +L+ + R+G IP PG D + ++ G+
Sbjct: 1 MNLSKIFFNVTEV---PELRKRFIFTMLLLAVYRLGAHIPTPGIDVIAL-SEFFKRAQGT 56
Query: 198 VDELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKS 253
V D GA KL+ F LG+ P I ++I+MQ+L +PS+ +L K EG G KI
Sbjct: 57 VFGFMDVFSGGALSKLTIFALGVMPYISSAIIMQLLTVAIPSIEKLAKEEGEYGRRKINQ 116
Query: 254 YIWWISLGFAILEAVIVA----CYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICD 308
Y + ++ A ++A+ +A P I + + V L GA + W+ +
Sbjct: 117 YTRYGAVLLAFIQALGIAIGLESMKSPSGIPVVPNPGFTFMFVCVTCLTAGATFLMWLGE 176
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I+E G G G S++I GI+ + + + + + + ++ V
Sbjct: 177 KITEKGIGNGMSILIFAGIVASIPNAAITTFTLFKNGEISLFKIIGIISIILAMIAAI-V 235
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ E R+V LQY + A + + Y+P +NP+ + P++ +L FP+ +
Sbjct: 236 YIQEAERRVPLQYARRNIGRQA-----VGKYTSYLPIKLNPANVIPIIFAASVLMFPATI 290
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +P Q + + L P ++ +Y +YA +F F F
Sbjct: 291 VKFIHNPIAQAIYDALQPGST------LYLIVYAVLIFFFTYF 327
>gi|244539088|dbj|BAH83131.1| protein translocase subunit SecY [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 433
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 168/336 (50%), Gaps = 26/336 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DELGDF-- 204
A++ S R LFV I+I RIG +IP+PG + ++ + L+ +G++ D L F
Sbjct: 2 AKTSLDSLKHRVLFVITA-IIIFRIGSYIPIPGINTTVLSK-LLNQQNGTIIDMLNMFSG 59
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA + S F LGI P I AS+++Q+L + P+L ++K+G G KI Y + +L AI
Sbjct: 60 GALSRASIFALGIMPYISASVIIQLLSIVNPTLADIKKDGEIGRLKINQYTRYSALALAI 119
Query: 265 LEAVIVACYSLP----YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
L++V + +LP +H+++ ++ LV G + + W+ + +++ G G G S
Sbjct: 120 LQSVGITT-ALPKIAGIDNLIFNHNMQFYFISVMSLVTGTIFLMWLGEQLTDHGIGNGIS 178
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
++I GI+ + L + +++ +L ++ +F I+ + V V G R++ +
Sbjct: 179 ILIFTGIIASLPPAIGHTLERSRQGDLQFTELLLIVILIFAII-FFVVFVERGQRRIIVH 237
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y A + P + ++P IN +G+ P + + ++ FP+ +AS G + +
Sbjct: 238 Y-----AHRQQGRRPYYQPTSHLPLKINMAGVIPAIFASSIILFPATIASWFG----RSM 288
Query: 441 KEILNPETSVGARP------WVYYTIYAFFVFLFNI 470
L + S+ +P +Y T FF F + +
Sbjct: 289 NNYLLTQISLYLQPGQLIYLLLYSTAIVFFCFFYTV 324
>gi|373499246|ref|ZP_09589737.1| preprotein translocase, SecY subunit [Fusobacterium sp. 12_1B]
gi|404369343|ref|ZP_10974683.1| preprotein translocase, SecY subunit [Fusobacterium ulcerans ATCC
49185]
gi|313690726|gb|EFS27561.1| preprotein translocase, SecY subunit [Fusobacterium ulcerans ATCC
49185]
gi|371959317|gb|EHO77008.1| preprotein translocase, SecY subunit [Fusobacterium sp. 12_1B]
Length = 426
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 25/324 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G +IP PG D D L+ ++ D LG GA +
Sbjct: 19 ELRDRIIFTLIMFLVARVGTYIPAPGIDV-----DRLATMTAQSDILGYINMFSGGAFKR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+ +L I+P + +++K+G G +I + ++++ A+++
Sbjct: 74 VSIFALGIVPYINASIVFSLLAVIIPKIEEIQKDGEAGRNRINQWTRYLTIAIAVVQGFG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + T L G + + WI + IS G G G SL+I + +++
Sbjct: 134 V-CMWLQSVGLVTTPGTLFFLTTVVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY--GFKLA 387
G ++ + + + GS P ++ + G + V+ G RK+ + Y GF
Sbjct: 193 GGPSSVVQTIQTMKGSKF-LIPVLILIAGAAILTVAGIVIFQLGQRKIPIHYVGKGFSGK 251
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
++S YIP +N +G+ PV+ + ++ PS++ + + S + K L
Sbjct: 252 GGMGQNS-------YIPLKLNSAGVMPVIFASVVMMIPSVIINAIPSQY--TFKTTLAMV 302
Query: 448 TSVGARPWVYYTIYAFFVFLFNIF 471
S + VY +YA + F+ F
Sbjct: 303 FS--QKHPVYMIVYAIVIIFFSFF 324
>gi|225571573|ref|ZP_03780569.1| hypothetical protein CLOHYLEM_07671 [Clostridium hylemonae DSM
15053]
gi|225159650|gb|EEG72269.1| hypothetical protein CLOHYLEM_07671 [Clostridium hylemonae DSM
15053]
Length = 438
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 152/293 (51%), Gaps = 16/293 (5%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---G 205
++F +IR+++ T +++++ RIG +P PG D I +D+ + +G L + G
Sbjct: 7 KAFQIKDIRKKIGYTFLMLIVIRIGSELPTPGVDPSYI-KDFFAQNTGEAFNLFNAFTGG 65
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ ++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI + ++++ A++
Sbjct: 66 SFEQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIVAITRYLTVALALI 125
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
E+ +A ++ + + L G+ + WI + I+E G G G S+++ +
Sbjct: 126 ESTAMAV-GFGRRGLLVEYNFVNAAIVVLTLTAGSALLMWIGERITEKGVGNGISIVLVI 184
Query: 326 GILTGYTETLYKMLSQLL-GSSVRWWPFMLGLLGVFTIV---TMWAVVVTEGCRKVKLQY 381
I++ + + Q + G S+ L ++ +F I+ ++ +V+ +G R++ +QY
Sbjct: 185 NIISRIPNDMSTLFEQFVKGKSLASGG--LAVVIIFAIILALVVFVIVLQDGERRIAVQY 242
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ +IP IN +G+ P++ + L+ FP ++AS LG
Sbjct: 243 -----SQKVVGRKTFGGQSTHIPLKINTAGVIPIIFASSLMQFPIVIASFLGK 290
>gi|386841899|ref|YP_006246957.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374102200|gb|AEY91084.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451795193|gb|AGF65242.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 437
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 22/306 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG + + + Q ++ G+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLGIIVVYRVGTHIPIPGVNYKAV-QTCVNEAQGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEA---VIVACYSLPYSIYAASHSV---KHVMVTAFLLVC---GAMTMSWICD 308
+++ AIL+ V A +S + + S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCSVATSIVPDQAIFTTITMVICMTAGTAVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
+++ G G G S+++ + I + L+ + Q G+ W ++ V ++ V
Sbjct: 180 LVTDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLVMVALVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 429 ASILGS 434
A G
Sbjct: 293 AQFAGG 298
>gi|251781538|ref|YP_002995839.1| preprotein translocase subunit SecY [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390166|dbj|BAH80625.1| protein translocase subunit [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 447
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 164/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 28 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 79
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 80 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 139
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 140 IGITAGFNTLSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 199
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + S ++ ++G +L V IV + V + K+ +
Sbjct: 200 GIISSIPNAIATIREDYFVNVKASDLQSSYLIVGILILAVLAIV-FFTTYVQQAEYKIPI 258
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + + P
Sbjct: 259 QYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDIP 309
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++EI N +T VG IYA + LF+ F
Sbjct: 310 WLTRLQEIFNYQTPVG------MMIYAVLIILFSFF 339
>gi|398343365|ref|ZP_10528068.1| preprotein translocase subunit SecY [Leptospira inadai serovar Lyme
str. 10]
gi|398348408|ref|ZP_10533111.1| preprotein translocase subunit SecY [Leptospira broomii str. 5399]
Length = 460
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 172/354 (48%), Gaps = 39/354 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L + A F E+R ++F T ++++ R+G I +PG D +++ + + S +G
Sbjct: 1 MLTSIANIFKIPELRNKVFFTLGMLLLFRLGTHITIPGIDPKVV-SAIAADATASEGLVG 59
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F GA L S F LGI P I +SI+MQ++ +VPSL +L+KEG +G +KI Y +
Sbjct: 60 MFDMFAGGALLNFSIFALGIMPYISSSIIMQLVMVLVPSLQKLQKEGEEGRKKIGQYTKY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKH------------VMVTAFLLVCGAMTMSW 305
++ ++++ V + +S A + H + + G + + W
Sbjct: 120 GTIILCAVQSLAVIRLAQQWSYGADQKAALHPGLIHSSVESWFFFIALLSITTGTVLLIW 179
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
+ + I+E G G G SL+I GI+ ++Y++ + + ++ LL +F ++
Sbjct: 180 LGEQITERGIGNGISLLIFAGIVGRLPSSVYQLFQENFVDGLN----IIILLLLFILLIS 235
Query: 366 WAVVVTEGCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYL 421
V++T+G RKV LQY G ++ A + IPF +N + + P++ + L
Sbjct: 236 LTVLLTQGVRKVPLQYGKQMVGRRMVQAKSQS---------IPFKVNGASVMPIIFASSL 286
Query: 422 LAFP-SILASILGSPFWQH---VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L FP +I+ I+ P W + + LNP + + VY+ IY + F F
Sbjct: 287 LLFPQTIIQQIVDIPEWAGWAVLLDYLNPFSQIWYHAAVYFFIYIGLIVFFAYF 340
>gi|384564382|ref|ZP_10011486.1| preprotein translocase, SecY subunit [Saccharomonospora glauca K62]
gi|384520236|gb|EIE97431.1| preprotein translocase, SecY subunit [Saccharomonospora glauca K62]
Length = 435
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 48/355 (13%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDFGA 206
++R+++ T +++V+ RIG P PG ++ Q+ S ++ L GA
Sbjct: 13 DLRKKILFTLMIVVVYRIGAVTPAPGVSYPNVQACLEQVEDQNIFSLLN-----LFSGGA 67
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
L+LS F GI P I ASI++Q+L ++P +L++EG G K+ Y ++++ AIL+
Sbjct: 68 LLQLSVFATGIMPYITASIIIQLLTVVIPRFEELKREGQAGQSKLTQYTRYLTIALAILQ 127
Query: 267 AVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A V + +++ +SV + +T + G M W+ + I+E G G G
Sbjct: 128 ATGVVALADRGQLFSNCAQPVLPDNSVFTLSLTVLTMTAGTAVMMWLGELITERGVGNGM 187
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I + I +L+ G + F + LL + I ++ + V +G R++ +
Sbjct: 188 SLLIFLNIAARIPTEGLAILNNQGGLTF----FFICLLALAIIASV--IFVEQGQRRIPV 241
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---- 435
QY + + Y+P +N +G+ PV+ + LL P +L ++G P
Sbjct: 242 QYAKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLLGQLIGDPNQAS 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
WQ + S WV+ +Y + F F I TIT V+D
Sbjct: 297 GWQRFLQNYVTNQS----HWVHIALYFAMIIFFTYFYI---------TITFNVDD 338
>gi|407793910|ref|ZP_11140940.1| preprotein translocase subunit SecY [Idiomarina xiamenensis 10-D-4]
gi|407213763|gb|EKE83616.1| preprotein translocase subunit SecY [Idiomarina xiamenensis 10-D-4]
Length = 442
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 147/323 (45%), Gaps = 13/323 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
SE++RRL I++ R G F+P+PG D ++ Q + V F GA + S
Sbjct: 16 SELKRRLLFVLGAIIVFRAGSFVPVPGVDTAVLAQLFEQQKDTIVAMFNMFSGGALERAS 75
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
LGI P I ASI+MQ+ +VPSL +L+KEG G KI Y W +L A +++ +A
Sbjct: 76 ILALGIMPYISASIIMQLASVVVPSLAELKKEGEAGRRKISQYTRWGTLILATFQSIGIA 135
Query: 272 C---YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+P + V + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 136 TGLPNFMPGLVIDPGFGFYFTAVVS--LVTGTMFLMWLGEQITERGIGNGISILIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + Q + +L + + VT + V V G R++ + Y A
Sbjct: 194 AGLPSAIGQTAEQARQGDLNVLLLLL-IGVIVVAVTYFVVFVERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+ ++P +N +G+ P + + ++ FPS +AS +GS +
Sbjct: 248 RQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPSTIASSVGSGDGMFADILQQISM 307
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
+V +Y +YA + F F
Sbjct: 308 TVSPGQPLYALLYAAAIIFFCFF 330
>gi|431792489|ref|YP_007219394.1| protein translocase subunit SecY [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782715|gb|AGA67998.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 429
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 161/337 (47%), Gaps = 45/337 (13%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 206
E+R+++ T ++ ++ RIG IP+P + ++ Q D+L SG G+
Sbjct: 14 ELRKKIGFTLMMFLVFRIGAHIPIPYINHDVLSQMLGTGTLYDFLDTFSG--------GS 65
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IW 256
+ S F L I+P I ASI++Q+L ++P L +L KEG G +KI Y +
Sbjct: 66 FRRFSVFALSITPYITASIILQLLTIVIPYLERLAKEGEYGRKKITQYTRYGTVILGFVQ 125
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+ F + A+++ + ++IY ++ A +L G + W+ + I+E+G G
Sbjct: 126 GFGMTFGLRGALVIPQPGMEWAIY---------LLVALILTAGTAFLMWLGERITENGIG 176
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G SLII GI+ G + + K ++ LL +LGL+ + + V + EG R+
Sbjct: 177 NGISLIIFAGIVAGVPDAI-KYIAGLLKVGEINALSVLGLVVIGAAIIAGVVFIQEGQRR 235
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GS 434
+++QY A +IP +N +G+ P++ LLAFPS +A+ + S
Sbjct: 236 IQVQY-----AKRVVGRRTYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMPATS 290
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q V + S+ + P+++ YA + F F
Sbjct: 291 GYVQFVNKWFVMNGSLTSIPYLF--TYAVLIIFFTYF 325
>gi|407278721|ref|ZP_11107191.1| preprotein translocase subunit SecY [Rhodococcus sp. P14]
Length = 437
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 34/335 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 208
++RR++ V L+ + R+G +P PG D R I Q +G S+ L GA L
Sbjct: 13 DLRRKILVALGLVALYRLGATLPSPGVDYGNVRACIDQLSGGDSAGIYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A+L++
Sbjct: 73 QLSVFAIGIMPFITASIIVQLLTVVIPRFEELRKEGQSGQAKMTQYTRYLAVALAVLQST 132
Query: 269 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
IVA + + A S+ ++V ++ GA + W + I+E G G G S+
Sbjct: 133 GIVALAARGQLLQGCSEPILADDSIFGMVVIVLVMTAGAALVMWFGELITERGVGNGMSI 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI + +L R +L V +V V V +G R++ +QY
Sbjct: 193 LIFAGIASRLPSEGRTILES------RGGLVFTIVLVVALVVITGVVFVEQGQRRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------P 435
+ S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 247 AKRMVGRRMYGGS-----STYLPLKVNQAGIIPVIFASSLLYLPNLIAQLTGATSATDPS 301
Query: 436 FWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + + ++NP V +Y+ + FFVF +
Sbjct: 302 WWQRIINEYLVNPNNPV--YIAIYFGLIVFFVFFY 334
>gi|365920167|ref|ZP_09444517.1| preprotein translocase, SecY subunit [Cardiobacterium valvarum
F0432]
gi|364578437|gb|EHM55641.1| preprotein translocase, SecY subunit [Cardiobacterium valvarum
F0432]
Length = 441
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 157/330 (47%), Gaps = 27/330 (8%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELK 209
E+ RL+ +++ RIG IP+PG D + Q + S GS+ +L + GA
Sbjct: 9 NKELVSRLWYLVFALIVYRIGAHIPVPGIDHAKVQQLFES-GEGSIFQLFNMFSGGALSN 67
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S LG++P I ASI++Q+ H+ P L +LR++G G +KI Y +++LGFA+++
Sbjct: 68 ASLLALGVAPYISASIVLQLFTHMYPPLKELRQQGSSGQKKISQYTRYLALGFALVQGYA 127
Query: 270 VA--CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
++ + ++Y H +++ L GA+ M W+ + I+E G G G S++I GI
Sbjct: 128 ISKMVMAQGLTLYQGQH---FLLLGTMSLATGALFMMWLGEQITERGIGNGISMLIFAGI 184
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA--VVVTEGCRKVKLQYYGFK 385
+ ++ Q + ++ F L LL I+ ++A V + R++ + Y
Sbjct: 185 AVHIPSGIVNLIVQAKEGDITFFRFFLMLL---IIIALFAFIVFIERAQRQIAIHY---- 237
Query: 386 LASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVK 441
A R+ S ++P IN +G+ P + + ++ ++LG S W
Sbjct: 238 ---AKRQGLGSLGMGKRSHLPLKINMAGVIPAIFASAIITLIVSSLALLGGMSGAWGRYF 294
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S G W+Y ++ + LF+ F
Sbjct: 295 SDMAHGFSQG--NWLYVATFSLLIVLFSFF 322
>gi|322515614|ref|ZP_08068593.1| preprotein translocase subunit SecY [Actinobacillus ureae ATCC
25976]
gi|322118324|gb|EFX90599.1| preprotein translocase subunit SecY [Actinobacillus ureae ATCC
25976]
Length = 440
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 18/284 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRASTFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIVQLLTAIHPPLAELKKEGEAGRRKISKYTRYATLLLAFIQSIGISI-AL 138
Query: 276 PYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + + S+ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVADLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
T+ + + Q + P +L L+ V VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARQGEIS--PLVLLLVAVIAFAVTYFVVFVERGQRRIVVNY-------ASRQ 249
Query: 393 DSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + ++ FP+ ++ G
Sbjct: 250 QGRMMAPARSSHLPLKVNMAGVIPAIFASSIILFPASISQWFGQ 293
>gi|403066618|ref|YP_006639107.1| preprotein translocase subunit secY (chloroplast) [Saccharina
japonica]
gi|378787531|gb|AFC40161.1| preprotein translocase subunit secY (chloroplast) [Saccharina
japonica]
Length = 431
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 32/331 (9%)
Query: 157 RRRLFVTAVLIVISRIGYFIPLPGFDRR----LIPQDYLSFVSGSVDELGDFGAELKLSF 212
R+R F+T L+ + RIG FIPLP D + L+ + + ++ G S
Sbjct: 14 RQRFFLTIGLLTLVRIGSFIPLPYIDIKTFSPLLESNTSTTAVATILNSFSGGENASFSI 73
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIVA 271
LGI P I ASI++Q+L I P+L++L+KE G G K+ Y +++ AI+E+ IV
Sbjct: 74 LSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIES-IVT 132
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
YS I+ + +V ++ + L+ G+M + W + I++ G G GSS++IC I++ +
Sbjct: 133 TYSFRPLIF--NWNVLVLIQISLTLIAGSMIILWFSELITKDGIGNGSSILICFNIVSNF 190
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ L M+ L ++ F +G G+F + T+ + + E K+ L SA++
Sbjct: 191 PDQLRAMILALSNQNI-IVSFFIG--GIFLLTTVGCIYINEAMVKI-------PLVSASQ 240
Query: 392 EDSPITEVEPY----IPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK------ 441
+ + + +P +N +G+ P++ T+ ++ IL+S+ + Q V
Sbjct: 241 LLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMV---ILSSLTNLIYGQLVNIELFSF 297
Query: 442 -EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+ ++G Y++ Y VF F F
Sbjct: 298 LNSLSTNLTLGVGKIFYWSTYGILVFFFTSF 328
>gi|359782254|ref|ZP_09285476.1| preprotein translocase subunit SecY [Pseudomonas psychrotolerans
L19]
gi|359370047|gb|EHK70616.1| preprotein translocase subunit SecY [Pseudomonas psychrotolerans
L19]
Length = 428
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 27/306 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG + L Q+ + +S + + GA +
Sbjct: 2 SELWTRLRFLFLAIIVYRIGAHIPVPGINPDQLAALFRQNEGTILS--LFNMFSGGALER 59
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 267
+S F LGI P I ASI+MQ+L I P L QL+KEG G KI Y + +L A+++A
Sbjct: 60 MSIFALGIMPYISASIIMQLLTAISPQLEQLKKEGESGRRKISQYTRYGTLVLALVQATG 119
Query: 268 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V +A + +S+ S V VT F V GA+ M W+ + I+E G G G S++I
Sbjct: 120 MSVGLASQGVAFSV---GFSFYFVAVTTF--VAGALFMMWLGEQITERGIGNGISMLIFA 174
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 384
GI+ G + + + F L ++GV + + VV E G R++ + Y
Sbjct: 175 GIVAGLPRAIGQSFESARQGDINI--FALIMVGVVAVAIIAFVVFIERGQRRIAVHY--- 229
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHV 440
A + ++P +N +G+ P + + +L FP+ L S G + Q V
Sbjct: 230 --AKRQQGRKVFAAQNSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDV 287
Query: 441 KEILNP 446
+ + P
Sbjct: 288 AQAIAP 293
>gi|350567965|ref|ZP_08936371.1| preprotein translocase subunit SecY [Propionibacterium avidum ATCC
25577]
gi|348662217|gb|EGY78886.1| preprotein translocase subunit SecY [Propionibacterium avidum ATCC
25577]
Length = 440
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 23/304 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------ 196
+L+ A +F ++RR++ T ++ + R+G IP+P + I SG
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVSNINTCVSQASSGSSAGLY 60
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
S+ L GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGILPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDT 309
+++L +L+A + ++ S S+ ++V + G + W+ +
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTGCALPVVYSTSIFEIIVMILTMTAGTTIVMWMGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
++E G G G S++I I + ++L+ K+ G + W+ F+L + V ++ M A
Sbjct: 181 VTEHGIGNGMSIMIFTQIAARFPDSLWAIKVARNGAGQAHAWFVFILVI--VIGLLVMAA 238
Query: 368 VV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
VV + +G R++ +QY + S YIP +N SG+ PV+ + +L P
Sbjct: 239 VVFIEQGQRRIPVQYAKRMVGRRMLGGS-----TTYIPLKVNQSGVIPVIFASSILYLPV 293
Query: 427 ILAS 430
+ A+
Sbjct: 294 LYAT 297
>gi|170728989|ref|YP_001763015.1| preprotein translocase subunit SecY [Shewanella woodyi ATCC 51908]
gi|169814336|gb|ACA88920.1| preprotein translocase, SecY subunit [Shewanella woodyi ATCC 51908]
Length = 446
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 19/298 (6%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L +A F SE++ RL I++ R G F+P+PG D ++ + + + G++ LG
Sbjct: 8 LKSAKGGF--SELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELF-NQQKGTI--LGM 62
Query: 204 F-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
F GA + S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y +
Sbjct: 63 FNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRYG 122
Query: 259 SLGFAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L +AV +A LP + + V LV G M + W+ + I+E G G
Sbjct: 123 TLVLGTFQAVGIAT-GLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGIG 181
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G S++I GI+ G + + Q + +L + VF VT + V V G R+
Sbjct: 182 NGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLIAVIVFA-VTYFVVFVERGQRR 240
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + Y A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 241 IVVNY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|357237950|ref|ZP_09125289.1| preprotein translocase, SecY subunit [Streptococcus ictaluri
707-05]
gi|356753454|gb|EHI70569.1| preprotein translocase, SecY subunit [Streptococcus ictaluri
707-05]
Length = 434
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 164/337 (48%), Gaps = 44/337 (13%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 14 NVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AM 65
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +
Sbjct: 66 RNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNALSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVK 378
GI++ + + + S ++ ++G +L V I+ + V + K+
Sbjct: 186 AGIISSIPNAIATIREDYFVNVKASDLQTSYLIVGVLILAVLAII-FFTTYVQQAEYKIP 244
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 434
+QY KL A S Y+P +NP+G+ PV+ + + PS + L +
Sbjct: 245 IQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFLQNGRDI 295
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++E+ N +T VG +YA + LF+ F
Sbjct: 296 PWLSRLQELFNYQTPVG------MIVYAVLIILFSFF 326
>gi|407010050|gb|EKE25055.1| hypothetical protein ACD_5C00313G0003 [uncultured bacterium]
Length = 423
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 31/316 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 194
+L + F E+R ++ +++I RI +PLPG + RRL + L+
Sbjct: 1 MLEKITQIFKIPELRNKILFILGILIIFRIAANVPLPGVNIEQLRRLFEGNQFLGMLNVF 60
Query: 195 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKS 253
SG G +S LG+ P I ASI+MQ++ IVP + QL ++EG G +K
Sbjct: 61 SG--------GGLTNISIVMLGVGPYITASIIMQLMTMIVPRVEQLYKEEGEAGRQKFNM 112
Query: 254 YIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
+ W+++ AIL+ + + + S + V + G + + W+ + I+E
Sbjct: 113 WTRWLTVPLAILQTFSMVTLLRSQGVLTVTSSF-DIAVIVIIATAGTVFLMWLGELITEK 171
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTE 372
G G G SLII GI++G L K+ + V + LGLL V T++T+ VV VTE
Sbjct: 172 GIGNGVSLIIFAGIVSGLPSGLSKLFLTFDSTQVFVY---LGLL-VVTLITIAGVVLVTE 227
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
G R + + Y A R + V ++P +N +G+ P++ ++ FP ++AS L
Sbjct: 228 GQRNIPVSY-----AKRVRGEKTYGGVSSHLPLRVNQAGVIPIIFAMSIMLFPGMIASFL 282
Query: 433 ---GSPFWQHVKEILN 445
SP + ++N
Sbjct: 283 MKASSPAIANAASMVN 298
>gi|77361714|ref|YP_341289.1| preprotein translocase subunit SecY [Pseudoalteromonas haloplanktis
TAC125]
gi|76876625|emb|CAI87847.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
haloplanktis TAC125]
Length = 442
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-DFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + + ++ + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLNVFVLLMVAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + ++ FP +AS G
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQ 293
>gi|365841060|ref|ZP_09382215.1| preprotein translocase, SecY subunit [Anaeroglobus geminatus F0357]
gi|364559152|gb|EHM37144.1| preprotein translocase, SecY subunit [Anaeroglobus geminatus F0357]
Length = 420
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 25/300 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
E R+R T ++ +I R+G IP+PG D I + S S + +L GA K S
Sbjct: 13 EFRKRAVFTLIMFIIFRLGVHIPVPGVDATAIESLFNSGQSFGLLDLFSGGALSKFSVLA 72
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVIVAC 272
+ I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + + LGF +
Sbjct: 73 MSITPYINASIIMQLLTAVVPTFEQWSKDNQDGRDKIQKVTRYGTVILGF-------IQA 125
Query: 273 YSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+++ Y++ A + +S V++ A +L G + W+ D I+ G G G SLII GI+
Sbjct: 126 FAMSYALKANNALIDNSWSMVLMVAIILTAGTCFLMWLGDQITAGGIGDGISLIIFAGIV 185
Query: 329 TGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
+ TLY+ + G+ + + L+ +F IV + + VT+G R++++ Y
Sbjct: 186 ARFPNGVNTLYQYVQA--GTINIFQAVLFALIALFMIVIV--IEVTQGQRRIQVHY---- 237
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A +IP +N +G+ P++ + +L FP +A + + Q + ++
Sbjct: 238 -AKRVVGRKMYGGHSTHIPLKVNQAGVIPIIFASSVLMFPITVAQFIRNDTIQWLAQVFG 296
>gi|375093443|ref|ZP_09739708.1| preprotein translocase, SecY subunit [Saccharomonospora marina
XMU15]
gi|374654176|gb|EHR49009.1| preprotein translocase, SecY subunit [Saccharomonospora marina
XMU15]
Length = 435
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 31/331 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP------QDYLSFVSGSVDELGDFGAEL 208
++R+++ T +++ + RIG +P PG + QD F S+ L GA L
Sbjct: 13 DLRKKILFTLMIVAVYRIGATMPAPGVSYPNVQACQAQVQDQNIF---SLLNLFSGGALL 69
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ AIL+A
Sbjct: 70 QLSVFATGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQSKLTQYTRYLTIALAILQAT 129
Query: 269 IVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V + ++ +SV + +T + G M W+ + I+E G G G SL
Sbjct: 130 GVVALADRGQLFGDCDQPVLPDNSVYSLALTVLTMTAGTAVMMWLGELITERGVGNGMSL 189
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I + I +L+ G V ++ +LGL + ++ + V +G R++ +QY
Sbjct: 190 LIFLNIAARIPAEGANILNN-QGGLVFFFVCVLGLAIIASV-----IFVEQGQRRIPVQY 243
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FW 437
+ + Y+P +N +G+ PV+ + LL P ++ ++G+P +W
Sbjct: 244 AKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLIGRLVGNPNEASWW 298
Query: 438 QHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
Q + + S +Y+ + FF + +
Sbjct: 299 QRFLQTYLVDQSSWVHILMYFALIIFFTYFY 329
>gi|254509568|ref|ZP_05121635.1| preprotein translocase, SecY subunit [Rhodobacteraceae bacterium
KLH11]
gi|221533279|gb|EEE36267.1| preprotein translocase, SecY subunit [Rhodobacteraceae bacterium
KLH11]
Length = 454
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 15/277 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+++R R+ T L+++ R+G FIP+PG D R + Q G + + GA +
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGAALREFMEQAGQGI--GGMVSMFTGGALGR 78
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A ++A
Sbjct: 79 MGIFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKINQYTRFGTVALATVQAYG 138
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+A SL A + M T LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLESGDLATDPGLYFRMSTMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIA 197
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
L + + G S P ++ + V I + VV E RK+ +QY +
Sbjct: 198 EVPAALAQFFAS--GRSGAISPAVIVGVIVMVIAVITFVVFMERALRKIHIQYPRRQAGM 255
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
E ++P +NP+G+ P + + LL P
Sbjct: 256 KVYEGG-----SSHLPVKVNPAGVIPAIFASSLLLLP 287
>gi|441496886|ref|ZP_20979112.1| Preprotein translocase secY subunit [Fulvivirga imtechensis AK7]
gi|441439359|gb|ELR72677.1| Preprotein translocase secY subunit [Fulvivirga imtechensis AK7]
Length = 437
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 158/331 (47%), Gaps = 42/331 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DELGDF--GAELKLS 211
++R R+ T +++ R+G FI LPG D P S G + D L F G+ + S
Sbjct: 16 DLRIRILNTLGFLIVFRLGSFIVLPGVD----PDALGSGAQGGIFDLLNTFLGGSFSRAS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L VP +L+KEG G +++ +++ + ++
Sbjct: 72 IFALGIMPYISASIVIQLLTVAVPYFQKLQKEGESGRKRLTQITRVLTIAITLAQSAGYL 131
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
++P + S V + +LV G M W+ + I++ G G G S++I +GI++ +
Sbjct: 132 AATIPSEAVLYTQSFFQVS-SMIILVAGTMFCMWLGEKITDKGIGNGISMLIMIGIISRF 190
Query: 332 -----TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----Y 382
+E + + +S L F+L ++ +F +V M V++T+ R++ +QY
Sbjct: 191 PGSIVSEAMTRGMSGALA-------FVLEIVALFFVV-MAVVMLTQAVRRIPIQYAKQVI 242
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
G KL R+ YIP +N SG+ P++ L+ P ++A I W+ E
Sbjct: 243 GNKLYGGKRD---------YIPLKVNASGVMPIIFAQALMFIPPLIAGI-----WKE-SE 287
Query: 443 ILNPETSVGARP--WVYYTIYAFFVFLFNIF 471
+ S A P W Y ++ + LF F
Sbjct: 288 VGAYIGSTFADPYSWQYNLVFGILILLFTFF 318
>gi|416051263|ref|ZP_11577361.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347993281|gb|EGY34655.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 441
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 444
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSILL 308
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIF 471
+P +P +Y +YA + F+ F
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFF 329
>gi|306821600|ref|ZP_07455198.1| preprotein translocase subunit SecY [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550345|gb|EFM38338.1| preprotein translocase subunit SecY [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 424
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 157/327 (48%), Gaps = 19/327 (5%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDEL 201
A ++ FK +++++L T +++ + R+G +P+PG + +I Q Y SF S +L
Sbjct: 3 TAVKNAFKIPDLKKKLVYTILMLAVFRVGSAVPVPGINVEVIKSMLQQYSSF--SSFYDL 60
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA + F LG+ P + +SI++Q+L +PSL ++K G +G +KI ++++G
Sbjct: 61 VSGGALNNFTIFALGVGPYVTSSIIIQLLAVAIPSLEDMQKSGEEGRKKIMQLTRYVTVG 120
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
A+L++ +A ++ SHS + + L G+ + W+ + I+E G G G S+
Sbjct: 121 LALLQSTALAIGFFNSALI--SHSRLNELSVVLTLTAGSAFLMWLGEQITEKGIGNGISI 178
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI++ K L + F++ L V + ++V E RKV +Q+
Sbjct: 179 LIFAGIVSRIPGGAIKSYEMLRTGQLNIIEFIV-FLAVSLAIIAGVIMVLEATRKVPVQH 237
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
A +IP IN +G+ PV+ + L P++L + +P +
Sbjct: 238 -----AKRVVGRKTYGGQTTHIPIKINQAGVIPVIFASSFLMMPNLLGMFIKNPGY---T 289
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLF 468
E +N + P +Y +YA FL
Sbjct: 290 EFVNKYFNTQGTPGLY--VYAGLEFLL 314
>gi|304438382|ref|ZP_07398323.1| preprotein translocase subunit SecY [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368748|gb|EFM22432.1| preprotein translocase subunit SecY [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 418
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 145/285 (50%), Gaps = 17/285 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F G++ L D GA K S
Sbjct: 13 ELRQKIIFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFSQGTLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I A+I++Q+L +VP+L Q KEG +GH+K ++++ A +A+
Sbjct: 70 VFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLTVVLAFFQAI--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + + ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ + +L+ + ++ ++ F G++ + IV + + + G R++ + Y A
Sbjct: 187 PKNIGTILAYVKAGTISYFSVFAFGVIALAMIV--FVIHIETGFRRIPITY-----AKRV 239
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
T +IPF +N +G+ P++ + +L FP +A + P
Sbjct: 240 VGGRTATGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFVDIP 284
>gi|291533607|emb|CBL06720.1| protein translocase subunit secY/sec61 alpha [Megamonas hypermegale
ART12/1]
Length = 395
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 140/279 (50%), Gaps = 23/279 (8%)
Query: 171 RIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQLGISPQIVASILM 227
R+G IP+PG + +I Q F SG++ L D GA K S F + I+P I ASI++
Sbjct: 6 RLGTHIPVPGVNPSVIEQ---LFNSGNLFGLLDLFSGGALSKFSLFAMSITPYINASIII 62
Query: 228 QVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVK 287
Q+L +VP+L Q KEG +GH+KI ++++ A L+A+ S+ + S+
Sbjct: 63 QLLTVVVPTLEQWSKEGEEGHKKITKTTRYLTVVLAFLQAI---GMSIGLKQAIINPSIT 119
Query: 288 HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSV 347
+++ A L G + + WI + I+ G G G SLII GI+ + L + + L ++
Sbjct: 120 SILIIAITLTAGTVFLMWIGEQITAHGVGNGISLIIFAGIVAALPQNLGTIYNYLQAGTI 179
Query: 348 RWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYI 403
++ + F I+ + +V + +G R+V + Y A +I
Sbjct: 180 SYFNVLF-----FAIIALAMIVFVIAIQQGQRRVPVSY-----AKRVVGRKTYGGQSTHI 229
Query: 404 PFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
P +N +G+ P++ + +L FP+ LA + +P+ + + +
Sbjct: 230 PLKVNQAGVIPIIFASSVLMFPATLAQFVQTPWIKTIAD 268
>gi|227505238|ref|ZP_03935287.1| preprotein translocase subunit SecY [Corynebacterium striatum ATCC
6940]
gi|227198137|gb|EEI78185.1| preprotein translocase subunit SecY [Corynebacterium striatum ATCC
6940]
Length = 441
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY--LSFVSG---SVDELGD 203
++F +++R+++ T V+I+ RIG IP PG D I L+ SG SV L
Sbjct: 6 QAFKDADLRKKIIFTIVMIIAYRIGAQIPSPGVDYASIAGRLRTLTEESGNLYSVINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y +++L A
Sbjct: 66 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEQLKKEGQSGQAKMTQYTRYLTLALA 125
Query: 264 ILEAV-IVAC--------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L++ IVA +P + A + ++V + GA+ + W+ + I+E G
Sbjct: 126 LLQSSGIVALADREQLLGQGVP--VLAEDRNFFTLIVLVITMTAGAILVMWMGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T ++ + + + GL+ I+ + + +G
Sbjct: 184 IGNGMSLMIFAGIATRLPTDGVSIMKN--NGGLVFAMVVAGLI----ILVVGITFIEQGQ 237
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ + + +P + W Y +Y F+ F
Sbjct: 293 GSAVVPDNWWQRNVIAHLQSPSS------WQYIVLYFVLTIFFSYF 332
>gi|386388972|ref|ZP_10073814.1| preprotein translocase, SecY subunit [Haemophilus
paraphrohaemolyticus HK411]
gi|387772237|ref|ZP_10128194.1| preprotein translocase, SecY subunit [Haemophilus parahaemolyticus
HK385]
gi|385696706|gb|EIG27177.1| preprotein translocase, SecY subunit [Haemophilus
paraphrohaemolyticus HK411]
gi|386907681|gb|EIJ72387.1| preprotein translocase, SecY subunit [Haemophilus parahaemolyticus
HK385]
Length = 441
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 139/275 (50%), Gaps = 16/275 (5%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIIQLLTAIHPPLAELKKEGEAGRRKISKYTRYATLLLAFIQSIGISI-AL 138
Query: 276 PYSIYAASHSVKHVM-VTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + + + +TA + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 139 PNMLSGLVPNPNMLFYITAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
T+ + + + + + +L + F VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEEARQGEISFLVLLLIAIIAFA-VTYFVVFVERGQRRIVVNY-------ASRQQ 250
Query: 394 SPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 251 GRMMAPARSSHLPLKVNMAGVIPAIFASSIILFPA 285
>gi|333382880|ref|ZP_08474545.1| preprotein translocase, SecY subunit [Dysgonomonas gadei ATCC
BAA-286]
gi|332828210|gb|EGK00922.1| preprotein translocase, SecY subunit [Dysgonomonas gadei ATCC
BAA-286]
Length = 438
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 30/332 (9%)
Query: 149 ESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--G 205
E+ +K E +R+RL +T +VI R G I LPG D + G +D L F G
Sbjct: 8 ENIWKIEDLRKRLMITFFFVVIYRFGVHIVLPGVDPEALNALQAKTSGGILDILNMFSGG 67
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A S F LGI P I ASI+MQ+L VP +L++EG G K+ Y ++++ +
Sbjct: 68 AFANASIFALGIMPYISASIVMQLLGMAVPYFQKLQREGESGRTKMNQYTRYLTVAILLF 127
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ Y L AA S + ++ + +L G+M + W+ + I++ G G G S II V
Sbjct: 128 QG---PAYLLGALGAAAPTSWEFLIPSTIILAGGSMFVLWLGERITDKGIGNGVSFIILV 184
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 381
GI+ L S L S L + ++ A+++ +G R++ +QY
Sbjct: 185 GIIARLPHALIGEFSSRLASQGGGLVMFLAEIVFLLLIICGAILLVQGTRRIPVQYAKRV 244
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA--SILGSPFWQH 439
G K AR+ YIP +N + + P++ ++ P +A S FW
Sbjct: 245 VGNKQYGGARQ---------YIPLKVNAANVMPIIFAQAIMFVPISIAGFSTEKGGFWGS 295
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ TSV Y ++AF + F F
Sbjct: 296 FMD----HTSV-----AYNVVFAFLIIAFTWF 318
>gi|24371849|ref|NP_715891.1| preprotein translocase subunit SecY [Shewanella oneidensis MR-1]
gi|24345662|gb|AAN53336.1| preprotein translocase subunit SecY [Shewanella oneidensis MR-1]
Length = 446
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 137/288 (47%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + SG++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QSGTI--LGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y W +L ++V
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSV 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + +L + +F VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIIFA-VTYFVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|421078713|ref|ZP_15539663.1| preprotein translocase, SecY subunit [Pelosinus fermentans JBW45]
gi|392523189|gb|EIW46365.1| preprotein translocase, SecY subunit [Pelosinus fermentans JBW45]
Length = 418
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E+R+++ T + ++ R G IP+PG D +I Q F SG++ L D GA K
Sbjct: 12 TELRQKVVFTLAMFLVFRAGTHIPVPGVDVSVIEQ---MFTSGNLFGLLDLFSGGALSKF 68
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F + I+P I ASI+MQ++ +VP+ Q KEG +G +K+ + ++ ++A+ +
Sbjct: 69 SIFAMSITPYINASIIMQLITIVVPTFEQWSKEGEEGRKKLTQITRYGTVLLGFIQAIGM 128
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A L +I + + ++ A L G + W+ + I+E G G G SLII GI++
Sbjct: 129 AI-GLKAAII--NPGIASTLLIALTLTAGTTFLMWLGEQITEKGIGNGISLIIFAGIVSR 185
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 386
+ LY + L ++ + +L F I+ + +V +T+G R++ +QY
Sbjct: 186 LPDGLYMLYEYLTAGTINIFNVLL-----FAIIALAMIVLVIAITQGQRRIPVQY----- 235
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A +IP +N +G+ P++ + +L FP +A
Sbjct: 236 AKRVVGRKTYGGHSTHIPLKVNQAGVIPIIFASSVLMFPVTIAQ 279
>gi|330812055|ref|YP_004356517.1| Sec protein secretion system subunit SecY [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380163|gb|AEA71513.1| Putative Sec protein secretion system, subunit SecY [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 428
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 2 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 59
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 60 MSIFALGIMPYISASIIMQLMSAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIG 119
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + A S V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 120 MSIGLAGQGVSFTADFSFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 177
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 178 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 230
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 231 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 277
>gi|218200780|gb|EEC83207.1| hypothetical protein OsI_28473 [Oryza sativa Indica Group]
Length = 1155
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 15/300 (5%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 207
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 736 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG 794
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 266
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++
Sbjct: 795 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQ 853
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 854 AIGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 910
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 911 IISYLPASFGRTVAQAFQDGN--YVGLLTIILSFLVLVLGIVYVQEAERKIPLNY----- 963
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
AS S + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 964 ASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLDFLKKAAISLNP 1023
>gi|114771247|ref|ZP_01448667.1| preprotein translocase SecY [Rhodobacterales bacterium HTCC2255]
gi|114548172|gb|EAU51059.1| preprotein translocase SecY [Rhodobacterales bacterium HTCC2255]
Length = 454
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 36/293 (12%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
E++ R+ ++++ R+G FIP+PG D + +FV + +G GA
Sbjct: 21 KELQSRIIFALGMLIVYRLGTFIPVPGIDADALK----TFVESAQQGIGGILNMFTGGAV 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+++ F LGI P I ASI++Q++ +VPSL QL+KEG G +KI Y + ++ AI +A
Sbjct: 77 SRMAIFALGIMPYISASIIVQLMTAMVPSLEQLKKEGEQGRKKINQYTRYGTVALAIFQA 136
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFL-----LVCGAMTMSWICDTISESGFGQGSSLI 322
Y L + A + +T L LV G M + WI + I+ G G G SLI
Sbjct: 137 -----YGLSAGLQAGDMATNPGFLTFQLPCIITLVGGTMFLMWIGEQITARGIGNGISLI 191
Query: 323 ICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
I VGI+ L + Q G P +L ++ + V + V + RKV +QY
Sbjct: 192 IFVGIVAELPAALAQFFVQ--GRQGTISPAVILSVMVMVVAVIAFIVFMERALRKVHIQY 249
Query: 382 ----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G K+ E S ++P +NP+G+ P + + LL P+ +A+
Sbjct: 250 PKRQVGMKVYGG--ESS-------HLPIKLNPAGVIPPIFASALLLLPTTIAT 293
>gi|429748896|ref|ZP_19282054.1| preprotein translocase, SecY subunit [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429169586|gb|EKY11333.1| preprotein translocase, SecY subunit [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 448
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 144/302 (47%), Gaps = 21/302 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--VDELGDF--GAELK 209
E++ R+ +T ++++ R G I LPG D + + S SG +D L F GA
Sbjct: 15 EELKNRIILTLGVLLVYRFGAHIVLPGIDSAQL-HELASRTSGGGLLDILNAFTGGAFSN 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F LGI P I ASI++Q++ +P L +L+KEG G KI W+++ +++A +
Sbjct: 74 ASIFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRRKINQITRWLTIAICLVQAPV 133
Query: 270 ----VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ +P S + + ++ +LV G + W+ + I++ G G G SL+I V
Sbjct: 134 YLYGINRLGVPDSAFVLGKGLGFIVPAVIILVTGTIFAMWLGEKITDKGIGNGISLLIMV 193
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV------TEGCRKVKL 379
GI+ + ++ L +S GL+ + V +W V+V + R++ +
Sbjct: 194 GIIARFPRAFAAEVASRLTASNG------GLMLILIEVILWFVIVLLCIYLIKAVRQIPV 247
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY + + YIP +N +G+ P++ L+ P+ +A + S F ++
Sbjct: 248 QYARRTADGGVATEKNVFGARQYIPLRLNAAGVMPIIFAQALMFVPATVAGLSQSEFAKN 307
Query: 440 VK 441
V+
Sbjct: 308 VQ 309
>gi|256390160|ref|YP_003111724.1| preprotein translocase subunit SecY [Catenulispora acidiphila DSM
44928]
gi|256356386|gb|ACU69883.1| preprotein translocase, SecY subunit [Catenulispora acidiphila DSM
44928]
Length = 448
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 38/328 (11%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVD------E 200
A +F ++R++L T ++ + R+G IP PG D + + +S SG +
Sbjct: 6 ARAFRTPDLRKKLLFTLGIMALFRLGAHIPAPGVDTKALSACVGISKASGQGNGALGLIN 65
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
L GA L+LS F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 66 LFSGGALLQLSIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGQTKITQYTRYLTI 125
Query: 261 GFAILEA--VIVACYSLPYSIYAASHSVKHVM----------VTAFLLVCGAMTMSWICD 308
G AIL++ ++ + P ++ S +V+ V L G + W+ +
Sbjct: 126 GLAILQSTTMLTLMKNNPSALLGPGCSGTNVIFQKVDWIGMAVMVITLTAGTTLIMWLGE 185
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G SL+I I + +L+ + +++ WP G+L + ++ V
Sbjct: 186 LITDRGIGNGMSLLIFTSITANFPSSLWSIKQG--STTMDGWPVFFGVLLMGMLLVGLVV 243
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V +G R++ +QY + S YIP +N +G+ PV+ + LL P ++
Sbjct: 244 FVEQGQRRIPVQYAKRMVGRRMYGGS-----STYIPMKVNQAGVIPVIFASSLLQLPLMV 298
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWV 456
A+ NP + G WV
Sbjct: 299 AN------------FTNPNATKGWAHWV 314
>gi|422758043|ref|ZP_16811805.1| preprotein translocase subunit SecY [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322410878|gb|EFY01786.1| preprotein translocase subunit SecY [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 434
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 164/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + S ++ ++G +L V IV + V + K+ +
Sbjct: 187 GIISSIPNAIATIREDYFVNVKASDLQSSYLIVGILILAVLAIV-FFTTYVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + + P
Sbjct: 246 QYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDIP 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++EI N +T VG +YA + LF+ F
Sbjct: 297 WLTRLQEIFNYQTPVG------MMVYAVLIILFSFF 326
>gi|346312842|ref|ZP_08854377.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
2_2_44A]
gi|345905993|gb|EGX75727.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
2_2_44A]
Length = 434
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 159/333 (47%), Gaps = 21/333 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGA 206
A+ F +IR R+F T ++ + R G I +PG D LI S + ++ LG G
Sbjct: 6 ADMFKNKDIRNRIFFTLAMLFVFRFGSAITVPGVDVTELIKGMQDSSLFAMINMLGGGGL 65
Query: 207 ELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
E +LS F +G+ P I ASI++Q+L ++P+L +L K G G ++I Y ++++ +
Sbjct: 66 E-QLSIFAMGVGPYITASIIIQLLSMDVIPALTELAKGGATGKKQIDRYTRYLAVVLSFF 124
Query: 266 EA-VIVACYSLPYSIYAASHSV-KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+A +V +S Y + S ++ A LL G+M + WI D IS G G G S+II
Sbjct: 125 QASTLVYSFSTQYKTLLVNGSGWASILYVATLLTAGSMFILWIGDRISMKGIGNGVSMII 184
Query: 324 CVGILT----GYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVK 378
GI++ +T ++ Q S+ GL V + ++ ++ V + RK+
Sbjct: 185 AAGIISRLPYQFTTAWQTLVDQSNSSATFNGILTFGLYIVSYLLIIVFVVFMQTAERKIP 244
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY + + ++ + Y+P IN + + PV+ + ++ P + ++ W
Sbjct: 245 IQYTSSTVTTRKKDMT-------YLPLKINSASVIPVIFASAIMVAPLQICKMV----WP 293
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ET +G + V IY + LF F
Sbjct: 294 AAGWVKTLETYMGMQTPVSLVIYVVLILLFTFF 326
>gi|255659523|ref|ZP_05404932.1| preprotein translocase, SecY subunit [Mitsuokella multacida DSM
20544]
gi|260848075|gb|EEX68082.1| preprotein translocase, SecY subunit [Mitsuokella multacida DSM
20544]
Length = 418
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 153/305 (50%), Gaps = 18/305 (5%)
Query: 146 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
+A + FK E+R+++ T ++ I R+G IP+PG D I + F +G++ L D
Sbjct: 3 SALGNIFKIPELRQKIIFTLIMFAIFRMGTHIPVPGVDPTAIEK---LFANGNLFGLLDL 59
Query: 205 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA K S F + I+P I A+I++Q+L ++P+L Q KEG +GH+K ++++
Sbjct: 60 FSGGAFSKFSIFAMSITPYINAAIIIQLLNVVIPTLEQWSKEGEEGHKKTTQVTRYLTVV 119
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
A L+A+ S+ + + ++++ A L G + + W+ + I+ G G G SL
Sbjct: 120 LAFLQAI---GMSIGLKAAILNPNPVNILIIAITLTAGTVFLMWVGEQITAQGVGNGISL 176
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
II GI+ + L + + ++ ++ FM G++ + +V + + V G R++ +
Sbjct: 177 IIFAGIVAALPKNLGTIYHYVQAGTISYFSVFMFGVIALAMVV--FVIHVETGFRRIPIS 234
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y + A +IP +N +G+ P++ + +L FP +A + P+ + V
Sbjct: 235 YAKRVVGQRAYGGH-----SSHIPLKVNQAGVIPIIFASSVLMFPVTVAQFIDVPWVKTV 289
Query: 441 KEILN 445
L
Sbjct: 290 ASYLE 294
>gi|392961470|ref|ZP_10326928.1| preprotein translocase, SecY subunit [Pelosinus fermentans DSM
17108]
gi|421056292|ref|ZP_15519219.1| preprotein translocase, SecY subunit [Pelosinus fermentans B4]
gi|421058296|ref|ZP_15521008.1| preprotein translocase, SecY subunit [Pelosinus fermentans B3]
gi|421064602|ref|ZP_15526463.1| preprotein translocase, SecY subunit [Pelosinus fermentans A12]
gi|421072729|ref|ZP_15533833.1| preprotein translocase, SecY subunit [Pelosinus fermentans A11]
gi|392438708|gb|EIW16531.1| preprotein translocase, SecY subunit [Pelosinus fermentans B4]
gi|392445156|gb|EIW22488.1| preprotein translocase, SecY subunit [Pelosinus fermentans A11]
gi|392453727|gb|EIW30590.1| preprotein translocase, SecY subunit [Pelosinus fermentans DSM
17108]
gi|392460762|gb|EIW37024.1| preprotein translocase, SecY subunit [Pelosinus fermentans A12]
gi|392461105|gb|EIW37333.1| preprotein translocase, SecY subunit [Pelosinus fermentans B3]
Length = 418
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E+R+++ T + ++ R G IP+PG D +I Q F SG++ L D GA K
Sbjct: 12 TELRQKVVFTLAMFLVFRAGTHIPVPGVDVSVIEQ---MFTSGNLFGLLDLFSGGALSKF 68
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F + I+P I ASI+MQ++ +VP+ Q KEG +G +K+ + ++ ++A+ +
Sbjct: 69 SIFAMSITPYINASIIMQLITIVVPTFEQWSKEGEEGRKKLTQITRYGTVLLGFIQAIGM 128
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A L +I + + ++ A L G + W+ + I+E G G G SLII GI++
Sbjct: 129 AI-GLKAAII--NPGIASTLLIALTLTAGTTFLMWLGEQITEKGIGNGISLIIFAGIVSR 185
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 386
+ LY + L ++ + +L F I+ + +V +T+G R++ +QY
Sbjct: 186 LPDGLYMLYEYLTAGTINIFNVLL-----FAIIALAMIVLVIAITQGQRRIPVQY----- 235
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
A +IP +N +G+ P++ + +L FP +A
Sbjct: 236 AKRVVGRKTYGGHSTHIPLKVNQAGVIPIIFASSVLMFPVTIAQ 279
>gi|315925236|ref|ZP_07921450.1| preprotein translocase subunit SecY [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621470|gb|EFV01437.1| preprotein translocase subunit SecY [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 419
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 27/330 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDELGDFGAELKLS 211
E+RR++ +T +L+++ R+G FIP+P D + + D F ++ G+FG +
Sbjct: 13 ELRRKIVMTLLLLLVYRLGSFIPVPYIDSQQLASLINDGGIFGLFNIISGGNFG---NFT 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI+P I ASI+M +L +P+L L+KEG +G +K+ Y ++++ AI++A+
Sbjct: 70 IFAMGITPYINASIIMNLLAFAIPALEALQKEGEEGRKKLAQYTRYLTIILAIVQAL--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
SL Y + + ++ G + + ++ + I+E G G G SLII + I++
Sbjct: 127 GMSLSYRNLLVEKTAFTIFAVVLIVTAGTIFLMYLGEKITEIGIGNGVSLIIFISIVSRI 186
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASAA 390
+ + + + ++ + LL +F I +AVV VTEG RK+ +QY A
Sbjct: 187 PDAVGSIYQYVQNGTMNAVSLI--LLVIFIIAATFAVVAVTEGQRKIPIQY-----AKRV 239
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEIL---NP 446
+IP +N +G+ P++ + L P+ LA+ S F Q V + P
Sbjct: 240 VGRKMYGGQNTHIPLRVNMAGVIPIIFASSLTLLPATLANFFPNSGFSQWVSKYFAWGQP 299
Query: 447 ETSVGARPWVYYTI---YAFFVFLFNIFDI 473
T+V +V T+ Y + FN FDI
Sbjct: 300 TTTV---IYVILTVAFTYFYTAVTFNPFDI 326
>gi|408680117|ref|YP_006879944.1| Preprotein translocase secY subunit [Streptomyces venezuelae ATCC
10712]
gi|328884446|emb|CCA57685.1| Preprotein translocase secY subunit [Streptomyces venezuelae ATCC
10712]
Length = 450
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 157/347 (45%), Gaps = 30/347 (8%)
Query: 141 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 200
+VL A +F ++R++L T +IV+ R+G IP+PG + Q G+
Sbjct: 10 GTVLTAFARAFKTPDLRKKLLFTLAIIVLYRLGAHIPVPGVSYEAVQQCVKQASEGNNSL 69
Query: 201 LG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
G GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 70 FGLVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYT 129
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWI 306
++++ A+L+ + + ++++ V+ + G + W+
Sbjct: 130 RYLTVALAVLQGTGLVATAKSGALFSGCRVADQVVPDPSIFTIATMVITMTAGTCIVMWL 189
Query: 307 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTM 365
+ I++ G G G S+++ + I G+ L+ + G + W F +L F +V +
Sbjct: 190 GELITDRGIGNGMSILMFISIAAGFPGALWAIKES--GKLAKGWIEFGTVILIGFVMVAL 247
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P
Sbjct: 248 -VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIP 301
Query: 426 SILASILGS-PFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLF 468
+++A S W K + G P+ Y+ + FF F +
Sbjct: 302 ALIAQFSNSTAGW---KTWIEAHFVKGDHPYYIATYFLLIVFFAFFY 345
>gi|259506750|ref|ZP_05749650.1| preprotein translocase SecY subunit [Corynebacterium efficiens
YS-314]
gi|259165621|gb|EEW50175.1| preprotein translocase SecY subunit [Corynebacterium efficiens
YS-314]
Length = 452
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 43/353 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++ T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 18 QAFKDADLRKKILFTIAMIVLYRIGAQIPSPGVDYASISGRLRDLTQDQSSVYS--LINL 75
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y +++L
Sbjct: 76 FSGGALLQLSIFAIGIMPFITASIIVQLLTVVIPHFEQLKKEGQSGQTKMTQYTRYLTLA 135
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ + + + A V + +++ + GA+ + W+ + I+E G
Sbjct: 136 LALLQSAGIVALADREQLLGAGIRVLNEDRDFFDLLILVITMTAGAILVMWLGELITEKG 195
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L G +L I+ + V V +G
Sbjct: 196 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVVFAV------VLVSVLILVIGVVFVEQGQ 249
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 250 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 304
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+WQ + + P + W Y +Y F+ F VS+ Y
Sbjct: 305 GSLEVTDNWWQRNVIAHLQTPSS------WQYIVLYFALTIFFSYF-YVSVQY 350
>gi|295396450|ref|ZP_06806612.1| preprotein translocase subunit SecY [Brevibacterium mcbrellneri
ATCC 49030]
gi|294970752|gb|EFG46665.1| preprotein translocase subunit SecY [Brevibacterium mcbrellneri
ATCC 49030]
Length = 433
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 27/342 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSV 198
+L +F ++R +L T +IV+ R+G FIP PG D + + L + +
Sbjct: 1 MLGAIGRAFRTPDLRNKLLFTLGVIVLFRLGSFIPAPGIDYSQVQTCVASPALGQGAFGL 60
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
L GA LKLS F LGI P I ASI+ Q+L ++P L KEG G K+ Y ++
Sbjct: 61 INLFSGGALLKLSIFALGIMPYITASIITQLLRVVIPRFEALHKEGASGQAKLTQYTRYM 120
Query: 259 SLGFAILEA----VIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDT 309
++ AIL A V +L ++ A + +++ + + L G + W+ +
Sbjct: 121 TIALAILNATTLVTTVRTGALFGNVDACMNLIQNDTWWGICIIVLTLTAGTALIMWMGEQ 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G S++I + G+ L +L+ G + +GLL V + V
Sbjct: 181 ITERGVGNGMSILIFTSVAAGFPAALNSILTS-KGIDIFAIVLAVGLL-----VILAVVF 234
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + R++ +QY A YIP +N +G+ PV+ + +L P++++
Sbjct: 235 VEQSQRRIPVQY-----AKRMVGRRMFGGTSTYIPIKVNQAGVIPVIFASSVLYLPTLIS 289
Query: 430 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G P V+ I N + G W+Y YA F F
Sbjct: 290 Q-FGDPEAGWVQWI-NAHLTRGDH-WIYILTYAVLTIFFAYF 328
>gi|86610046|ref|YP_478808.1| preprotein translocase subunit SecY [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558588|gb|ABD03545.1| preprotein translocase, SecY subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 432
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 25/334 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDE 200
+A E+F + S +R RLF+T L+++ R+G +IP+P DR R + S V G +D
Sbjct: 10 SAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGLLDV 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G L F LGI P I ASI+MQ+L +P+L L+K EG G +I Y +++
Sbjct: 70 FSGGGIS-ALGIFALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVT 128
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
L +AI++ + ++ + ++ + ++ + + T L G++ + W+ + I+E G G G
Sbjct: 129 LVWAIIQGIGISFWVREFA--STTNELAFMASTTLALAAGSLFVMWLGEMITEKGVGSGP 186
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SL+I V I+ L + +S S +L LL +F + + V V EG RK+ +
Sbjct: 187 SLLIFVNIVATLPRALGQTISLARADSSTIGGILL-LLAIFLVTIVGIVFVQEGSRKIPI 245
Query: 380 QYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 437
Y A R+ + E + Y+P +N G+ P++ +++ P LA +
Sbjct: 246 VY-------AKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTL 298
Query: 438 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V L+P + W Y Y + F+ F
Sbjct: 299 VQVANFLSPTS------WFYIPFYFVLILFFSYF 326
>gi|15896363|ref|NP_349712.1| preprotein translocase subunit SecY [Clostridium acetobutylicum
ATCC 824]
gi|337738320|ref|YP_004637767.1| preprotein translocase subunit SecY [Clostridium acetobutylicum DSM
1731]
gi|384459830|ref|YP_005672250.1| preprotein translocase subunit SecY [Clostridium acetobutylicum EA
2018]
gi|15026179|gb|AAK81052.1|AE007808_5 Preprotein translocase subunit SecY [Clostridium acetobutylicum
ATCC 824]
gi|325510519|gb|ADZ22155.1| preprotein translocase subunit SecY [Clostridium acetobutylicum EA
2018]
gi|336292055|gb|AEI33189.1| preprotein translocase subunit SecY [Clostridium acetobutylicum DSM
1731]
Length = 427
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 153/292 (52%), Gaps = 21/292 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+R+ T +++I R+G +IP+ G D I L+ SGS+ L + GA + S
Sbjct: 13 ELRKRMLFTIAMVLIFRMGNYIPVSGVDTSKILN--LTNQSGSLFGLYNMMTGGAFSQFS 70
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +G+ P I ASI+MQ+L +PSL QL KEG +G +KI+ +IS+ A L++ +
Sbjct: 71 IFAMGVIPYINASIIMQLLTVAIPSLEQLSKEGEEGRKKIQKITRYISVPLAALQS--LT 128
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMT-MSWICDTISESGFGQGSSLIICVGILTG 330
Y++ S A + K + L + A T + W+ D I++ G G G+SLII V I++
Sbjct: 129 FYAVIRSAGAMQTNSKLSVFLIILTLTAASTFLMWLGDQITDKGIGNGASLIIFVNIISR 188
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS-A 389
+ T+Y ++ +L + ++ + + ++ + V+ + R++ +QY G +
Sbjct: 189 FPSTIYNIV-KLQSADTVNIVEIVVVAVIACVLFVGVVIASLAERRIPVQYAGKAVGGKV 247
Query: 390 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
AR+ S +IP N+N S + ++ ++ FP+ + S FW K
Sbjct: 248 ARKQS------SHIPINMNASCIIAIIFAISVMMFPTTI-----SQFWPTAK 288
>gi|94543083|gb|ABF33131.1| Protein translocase subunit secY [Streptococcus pyogenes MGAS10270]
Length = 380
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 164/339 (48%), Gaps = 50/339 (14%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 31 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 82
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 83 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 142
Query: 268 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A + +L + +K ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 143 IGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 202
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 376
GI++ + + + S + ++G+L I+ + A+V V + K
Sbjct: 203 GIISSIPSAIATIREDYFVNVKASDLHSSYLIVGIL----IIAVLAIVFFTTYVQQAEYK 258
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ +QY KL A S Y+P +NP+G+ PV+ + + PS + + +
Sbjct: 259 IPIQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGR 309
Query: 435 --PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++EI N +T VG +YA + LF+ F
Sbjct: 310 DLPWLNRLQEIFNYQTPVG------MIVYALLIILFSFF 342
>gi|421863377|ref|ZP_16295075.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379139|emb|CBX22270.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 416
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 140/267 (52%), Gaps = 16/267 (5%)
Query: 167 IVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVAS 224
+V+ RIG IP+PG D + + Y S G + L F G+ + S F +GI P I AS
Sbjct: 7 LVVFRIGAHIPVPGVDAVALAKLYESAGGGILGMLNMFSGGSLERFSIFAIGIMPYISAS 66
Query: 225 ILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASH 284
I++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA + I S
Sbjct: 67 IIVQLASEILPSLKALKKEGEAGRKLITKYTRYGTVLLAILQSLGVASFVFQRGIVVTS- 125
Query: 285 SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLG 344
S + + T LV G M + W+ + I+E G G G SLII GI +G + ++++ +
Sbjct: 126 SFEFYVSTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSGITRLVAFVNQ 185
Query: 345 SSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQYYGFKLASAARE-DSPITEVEP 401
++ ++ LL VF ++ + +VV RKV + Y A R+ +S +
Sbjct: 186 GTMS---ILMALLIVFGVLLLIYLVVYFESAQRKVPIHY-------AKRQFNSGLGNHNT 235
Query: 402 YIPFNINPSGMQPVLTTTYLLAFPSIL 428
++PF +N +G+ P + + ++ FPS L
Sbjct: 236 HMPFKLNMAGVIPPIFASSIILFPSTL 262
>gi|427391383|ref|ZP_18885789.1| preprotein translocase, SecY subunit [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732026|gb|EKU94838.1| preprotein translocase, SecY subunit [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 434
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 154/327 (47%), Gaps = 29/327 (8%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELG 202
A +F ++R +L T ++V+ R+G FIP P + Q ++ GS D L
Sbjct: 6 AAAFRTPDLRNKLLFTMFIMVLYRLGSFIPSPFVSLSNVRQ-CVATQGGSNDLVSMMNLF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F LGI P I ASI++Q+L ++P +L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGIMPYITASIIVQLLRVVIPRFQELHKEGQTGQAKLTEYTRYLTIGL 124
Query: 263 AILEAVIVACYSLPYSIYAASH-------SVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L++ +V + Y+I+ + +T + G + W+ + I+E G
Sbjct: 125 ALLQSSVVVS-TANYTIFGGCQLDVIPDATWWTYTLTILAMTAGTGLIMWMAELITERGV 183
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G S++I GI G+ + +L W ++ + VF ++T+ V + R
Sbjct: 184 GNGMSILIFTGICAGFPGLMGGIL------QTHGWGTVILVTAVFLLITLVVTFVEQSQR 237
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY + S Y+P +N + + PV+ + +L P+++A+ G+P
Sbjct: 238 RIPVQYAKRVIGRRTYGGS-----TTYLPIKVNMANVIPVIFASSILMLPTMIAT-FGNP 291
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYA 462
V+ I + G W Y YA
Sbjct: 292 ESGWVQWIQRNFSQSG---WAYILTYA 315
>gi|357390068|ref|YP_004904908.1| putative preprotein translocase SecY subunit [Kitasatospora setae
KM-6054]
gi|311896544|dbj|BAJ28952.1| putative preprotein translocase SecY subunit [Kitasatospora setae
KM-6054]
Length = 435
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 30/309 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F ++R++L T ++V+ R+G +P+PG + Q + V+G + L
Sbjct: 1 MLSAFARAFQTPDLRKKLLFTLGIMVLFRLGAHVPMPGINF----QAVHACVNGQKEGL- 55
Query: 203 DFG--------AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
FG A L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 56 -FGLVNLFSGNALLQLTIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQY 114
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSW 305
++++ A+L+ + + ++++ S+ + ++ G + W
Sbjct: 115 TRYLTIALAVLQGTGILATASSGALFSGCPEGGNIVPDQSIFRIATMVIIMTAGTTVIMW 174
Query: 306 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 365
+ + I++ G G G S++I I G+ +++ + G + W ++ V IV
Sbjct: 175 LGELITDRGIGNGMSILIFTSIAAGFPGSMWAIKES--GKLLDGWGEFASVIAVGIIVVC 232
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+ V + R++ +QY A YIP +N +G+ PV+ + LL P
Sbjct: 233 LVIFVEQAQRRIPVQY-----AKRMVGRRSFGGTSTYIPLKVNQAGVIPVIFASSLLYIP 287
Query: 426 SILASILGS 434
+++ + S
Sbjct: 288 ALVVQLTNS 296
>gi|254362777|ref|ZP_04978859.1| preprotein translocase subunit SecY [Mannheimia haemolytica PHL213]
gi|452744240|ref|ZP_21944088.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype 6 str. H23]
gi|153094406|gb|EDN75255.1| preprotein translocase subunit SecY [Mannheimia haemolytica PHL213]
gi|452087736|gb|EME04111.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype 6 str. H23]
Length = 439
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 16/275 (5%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELIRQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIIQLLTAIHPPLAELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISL-AL 138
Query: 276 PYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P ++ + S+ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMVHGLVPNPSILFYVTSVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVADLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
T+ + + Q + + +L + F VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARQGELSFIVLLLVAIIAFA-VTYFVVFVERGQRRIVVNY-------ASRQQ 250
Query: 394 SPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 251 GRMMAPARTSHLPLKVNMAGVIPAIFASSIILFPA 285
>gi|261492712|ref|ZP_05989260.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495673|ref|ZP_05992119.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308780|gb|EEY10037.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311565|gb|EEY12720.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 439
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 16/275 (5%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELIRQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIIQLLTAIHPPLAELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISL-AL 138
Query: 276 PYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P ++ + S+ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMVHGLVPNPSILFYVTSVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVADLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 393
T+ + + Q + + +L + F VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARQGELSFIVLLLVAIIAFA-VTYFVVFVERGQRRIVVNY-------ASRQQ 250
Query: 394 SPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 251 GRMMAPARTSHLPLKVNMAGVIPAIFASSIILFPA 285
>gi|350563338|ref|ZP_08932160.1| preprotein translocase, SecY subunit [Thioalkalimicrobium
aerophilum AL3]
gi|349779202|gb|EGZ33549.1| preprotein translocase, SecY subunit [Thioalkalimicrobium
aerophilum AL3]
Length = 442
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV R+G IP+P D + + +D F GA +LS L
Sbjct: 22 RLLFVLGALIVF-RLGTHIPVPSIDPIALAAMFEQQRGTVLDMFNMFSGGALERLSILAL 80
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I A+I+MQ+L + P+L QL+KEG G KI Y + ++ A +A+ V+
Sbjct: 81 GIMPYISAAIIMQLLTAVSPTLEQLKKEGEAGRRKITQYTRYGTVVLATFQAIGVSIALQ 140
Query: 276 PYSIYAASHSVKH---VMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+I V MVTA + LV G + + W+ + I+E G G G SLII GI+ G
Sbjct: 141 AQNINGMPVVVNPGALFMVTAVVTLVSGTIFLMWLGEQITERGIGNGISLIIFAGIVAGL 200
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
L L Q+ ++ ++ LL + VT + V V G R++ +QY A R
Sbjct: 201 PSALGGTLEQVHTGALHAITVII-LLLLVAAVTAFVVFVERGQRRIPVQY-----AQRMR 254
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 451
E ++P +N +G+ P + + ++ FP+ L GS +++ + + T++
Sbjct: 255 GRKLYGGQEGHLPLKLNMAGVIPPIFASSIILFPASLGGWFGSS--ENMSWLKDIATTLA 312
Query: 452 ARPWVYYTIYAFFVFLFNIF 471
+Y YA + F F
Sbjct: 313 PGQPLYIMFYALAIMFFCFF 332
>gi|290968224|ref|ZP_06559767.1| preprotein translocase, SecY subunit [Megasphaera genomosp. type_1
str. 28L]
gi|335050133|ref|ZP_08543113.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 199-6]
gi|290781706|gb|EFD94291.1| preprotein translocase, SecY subunit [Megasphaera genomosp. type_1
str. 28L]
gi|333761765|gb|EGL39297.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 199-6]
Length = 420
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 143/286 (50%), Gaps = 27/286 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E R+R T ++ VI R+G IP+PG D +I F SG++ L D GA K S
Sbjct: 13 EFRKRAVFTLIMFVIFRLGVHIPVPGVDSSVIEN---LFSSGNLFGLLDLFSGGALSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
+ I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + ++ A+++A+ ++
Sbjct: 70 ILAMSITPYINASIIMQLLTSVVPTFEQWAKDNQDGRDKIQKVTRYGTVVLAVIQALAMS 129
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
Y+L + S V++ +L G + W+ D I+ G G G SLII GI+ +
Sbjct: 130 -YALKVNGALMVDSWTMVLMVTVILTAGTCFLMWLGDQITAGGIGNGISLIIFAGIVARF 188
Query: 332 ---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGF 384
T+YK + GS + + ++ +F I + V VT+G R+V +QY G
Sbjct: 189 PNGCSTVYKYIQA--GSINIFQAVLFIIIALFMIAVV--VEVTQGQRRVTVQYAKRIVGR 244
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
K+ +IP +N +G+ P++ + +L FP +A
Sbjct: 245 KMYGGH---------STHIPLKVNQAGVIPLIFASSVLMFPVTIAQ 281
>gi|291437819|ref|ZP_06577209.1| preprotein translocase subunit secY [Streptomyces ghanaensis ATCC
14672]
gi|291340714|gb|EFE67670.1| preprotein translocase subunit secY [Streptomyces ghanaensis ATCC
14672]
Length = 437
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 33/341 (9%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF- 204
A +F ++R++L T +IV+ RIG IP+PG D R + D G + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRIGTNIPIPGVDYRNVQACIDNAEANQGLFGLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDTISESG 314
+L+ + + +++ AS V + + VT +++ G + W+ + I++ G
Sbjct: 126 VLQGTGLVATARSGALFQGCPVASQIVPDQSIFVTVTMVITMTAGTAVVMWLGELITDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTEG 373
G G S+++ + I + L+ + Q GS W F +L F +V + V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWAIKEQ--GSLADGWIEFGTVMLVGFVMVAL-VVFVEQA 242
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA---- 429
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSN 297
Query: 430 SILGSPFWQHVKEILNPETSVGARPWV--YYTIYAFFVFLF 468
S G W I GA P + Y+ + FF F +
Sbjct: 298 SNAGWATW-----ITKNLADTGATPHIILYFLLIVFFAFFY 333
>gi|422315175|ref|ZP_16396614.1| preprotein translocase, SecY subunit, partial [Fusobacterium
periodonticum D10]
gi|404592758|gb|EKA94511.1| preprotein translocase, SecY subunit, partial [Fusobacterium
periodonticum D10]
Length = 364
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 159/323 (49%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 209
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + ++ G F+ L+ +T+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATITIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|363581383|ref|ZP_09314193.1| preprotein translocase subunit SecY [Flavobacteriaceae bacterium
HQM9]
Length = 446
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 143/283 (50%), Gaps = 8/283 (2%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
E+R R+ +T L+++ R G + LPG D + Q G + L F GA S
Sbjct: 15 ELRNRIGLTLGLLLVYRFGAQVVLPGIDAAQLAQLGTQTQDGLLGLLNAFTGGAFANASV 74
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---VI 269
F LGI P I ASI++Q++ +P L +L+KEG G +KI W+++G +++ +
Sbjct: 75 FALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKKINQITRWLTIGITLVQGPSYIY 134
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+LP S + +SV + + ++ G + W+ + I+E G G G SL+I VGI+
Sbjct: 135 NLFNTLPESAFVMGNSVAFIASSVIIITTGCIFAMWLGERITEKGIGNGISLLIMVGIIA 194
Query: 330 GYTET-LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + ++S++ G +L L ++ ++ + ++++ R+V +Q Y + A
Sbjct: 195 TLPQVFIQNLISRVSGEEGGGLIMVLIELVIWFVIILASILLVMAVRQVPVQ-YARRTAD 253
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
E + I YIP +N SG+ P++ ++ P+ +A +
Sbjct: 254 GGYEKN-IFGSRQYIPLKLNASGVMPIIFAQAIMFVPAAVAGL 295
>gi|345850530|ref|ZP_08803525.1| preprotein translocase subunit SecY [Streptomyces zinciresistens
K42]
gi|345638011|gb|EGX59523.1| preprotein translocase subunit SecY [Streptomyces zinciresistens
K42]
Length = 438
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 147/294 (50%), Gaps = 20/294 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF- 204
A +F ++R++L T +IV+ R+G +P+PG D R + D + G + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRVGTHVPIPGVDYRAVQVCVDQANANQGIFGLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDTISESG 314
IL+ + + S++ AA V + + VT +++ G + W+ + I++ G
Sbjct: 126 ILQGTGLVATARSGSLFQNCPAAGQIVPDRSIFVTITMVITMTAGTALVMWLGELITDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+++ + I + +L+ + +Q G+ W ++ V + V V +
Sbjct: 186 IGNGMSILMFISIAATFPSSLWAIKTQ--GNLAGGWIEFATVIAVGLFMVGLVVFVEQAQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
R+V +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 244 RRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
>gi|153816230|ref|ZP_01968898.1| hypothetical protein RUMTOR_02479 [Ruminococcus torques ATCC 27756]
gi|317501794|ref|ZP_07959980.1| preprotein translocase subunit secY [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088685|ref|ZP_08337595.1| preprotein translocase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439568|ref|ZP_08619179.1| preprotein translocase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846413|gb|EDK23331.1| preprotein translocase, SecY subunit [Ruminococcus torques ATCC
27756]
gi|316896827|gb|EFV18912.1| preprotein translocase subunit secY [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407208|gb|EGG86711.1| preprotein translocase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015797|gb|EGN45599.1| preprotein translocase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 450
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 10/296 (3%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L ++F +IR+R+F T V++VI R+G +P PG D I + + + +
Sbjct: 1 MLKTVRKAFQIEDIRKRIFYTFVMLVIVRLGSQLPTPGVDPTFIKEFFAQQTGDAFNFFE 60
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F G+ S F L I+P I +SI+MQ+L +P L +++KEG +G +KI + ++++
Sbjct: 61 AFTGGSFTNFSIFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEEGRKKIAAITRYVTV 120
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
A++E+ +A + + V +V L G+ M WI + I+E+G G G S
Sbjct: 121 ALALIESTAMAVGFGRQGLLEEYNFVSCAVVVC-TLTAGSAFMMWIGERITENGVGNGIS 179
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVK 378
+++ + I++ LY + + + + GL L V V ++ V++ G R++
Sbjct: 180 IVLLINIISRVPSDLYTLYEKFMSGKKLAQAGLAGLIILAVILAVVVFVVLLQSGERRIA 239
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY + + +IP +N +G+ PV+ + L+ P ++A LG
Sbjct: 240 VQY-----SKKVQGRKTYGGQSTHIPLRVNTAGVIPVIFASSLMQTPIVIAQFLGK 290
>gi|358446911|ref|ZP_09157450.1| protein-export membrane protein SecY [Corynebacterium casei UCMA
3821]
gi|356607235|emb|CCE55802.1| protein-export membrane protein SecY [Corynebacterium casei UCMA
3821]
Length = 442
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 25/299 (8%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--YLSFVSG---SVDELGD 203
++F +++R+++ T V+I+ RIG IP PG D I L+ SG SV L
Sbjct: 6 QAFKDADLRKKIIFTIVMIIAYRIGAQIPTPGVDYATIAGRLRQLTQESGDLYSVINLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y +++L A
Sbjct: 66 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEQLKKEGQSGQSKMTQYTRYLTLALA 125
Query: 264 ILE-AVIVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L+ A IVA + A ++ ++V ++ GA+ + W+ + I+E G G
Sbjct: 126 LLQSAGIVALADRQQLLGQGVEVLDADRNIFTLIVMVIVMTSGAVLVMWMGELITEKGIG 185
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 375
G SL+I GI T ++L G + ++ V +V + + + +G R
Sbjct: 186 NGMSLLIFAGIATRLPTDGLQILQNNGG-------LVFAMVVVGVVVLVVGITFIEQGQR 238
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 239 RIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
>gi|336309732|ref|ZP_08564712.1| preprotein translocase secY subunit [Shewanella sp. HN-41]
gi|335866846|gb|EGM71799.1| preprotein translocase secY subunit [Shewanella sp. HN-41]
Length = 446
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + SG++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QSGTI--LGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y W +L ++V
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSV 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + +L + VF VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFA-VTYFVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|302519640|ref|ZP_07271982.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB78]
gi|333026531|ref|ZP_08454595.1| putative preprotein translocase subunit SecY [Streptomyces sp.
Tu6071]
gi|302428535|gb|EFL00351.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB78]
gi|332746383|gb|EGJ76824.1| putative preprotein translocase subunit SecY [Streptomyces sp.
Tu6071]
Length = 437
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 162/338 (47%), Gaps = 27/338 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSG--SVDELGD 203
A +F ++R++L T +IVI R+G +P+PG + + + D + SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIDQANTNSGLFGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I +SI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGILPYITSSIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L+ + + +I+ S+ +V + G T+ W+ + +++ G
Sbjct: 126 VLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGELVTDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G S+++ V I G+ +L+ K L G + + +L V ++ V V +
Sbjct: 186 IGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVIL----VGLVMVALVVFVEQ 241
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 242 AQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFT 296
Query: 433 GSPF-WQH-VKEILNPETSVGARPWVYYTIYAFFVFLF 468
S W +++ L +TS +Y+ + FF F +
Sbjct: 297 DSQASWATWIRDNL-ADTSAWPHVVLYFLLIVFFAFFY 333
>gi|157377430|ref|YP_001476030.1| preprotein translocase subunit SecY [Shewanella sediminis HAW-EB3]
gi|157319804|gb|ABV38902.1| preprotein translocase, SecY subunit [Shewanella sediminis HAW-EB3]
Length = 446
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 19/298 (6%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L +A F SE++ RL I++ R G F+P+PG D ++ + + + G++ LG
Sbjct: 8 LKSAKGGF--SELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELF-NQQKGTI--LGM 62
Query: 204 F-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
F GA + S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y +
Sbjct: 63 FNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRYG 122
Query: 259 SLGFAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
+L +A+ +A LP + + V LV G M + W+ + I+E G G
Sbjct: 123 TLVLGTFQAIGIAT-GLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGIG 181
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
G S++I GI+ G + + Q + +L + VF VT + V V G R+
Sbjct: 182 NGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLIAVIVFA-VTYFVVFVERGQRR 240
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + Y A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 241 IVVNY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|359418633|ref|ZP_09210612.1| preprotein translocase SecY subunit [Gordonia araii NBRC 100433]
gi|358245443|dbj|GAB08681.1| preprotein translocase SecY subunit [Gordonia araii NBRC 100433]
Length = 443
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 155/346 (44%), Gaps = 43/346 (12%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-------QDYLSFVSGSVDELGD 203
F E+R+++ ++V+ R G +P PG D +++ QD S+ +
Sbjct: 9 FRTPELRKKILFVLFILVLYRFGATLPSPGVDFKVVKECLDPANQDSTQQQIYSLINMFS 68
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A
Sbjct: 69 GGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEELRKEGQAGQAKMTQYTRYLTVALA 128
Query: 264 ILEAVIVACYSLPYSIYA-----------ASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+L+A + + ++ A S+ + + ++V GAM + W + I+E
Sbjct: 129 LLQATGIVALAANGNLLQGQANCDAQGIIADKSITGLAIIVIVMVAGAMVVMWFGELITE 188
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I GI+ +L+ P L+ V ++ + VV E
Sbjct: 189 RGIGNGMSLLITAGIVARIPAEGRMILND-------RGPVAFSLVIVAGVIIVAGVVFIE 241
Query: 373 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
G R++ +QY + S Y+P +N +G+ PV+ + LL P +++ +
Sbjct: 242 MGQRRIPVQYAKRMVGRKMFGGS-----STYLPLKVNQAGVIPVIFASSLLYLPMLISQL 296
Query: 432 L---GSP-FWQHV--KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G P WQ + ++NP VY Y + F F
Sbjct: 297 TRGEGEPSRWQTFIDQHLVNPSDP------VYIVTYFLMIIFFTYF 336
>gi|385239007|ref|YP_005800346.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TCDC-AB0715]
gi|416146878|ref|ZP_11601425.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB210]
gi|417562989|ref|ZP_12213868.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC137]
gi|417565703|ref|ZP_12216577.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC143]
gi|421199981|ref|ZP_15657142.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC109]
gi|421790954|ref|ZP_16227142.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-2]
gi|323519508|gb|ADX93889.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TCDC-AB0715]
gi|333365834|gb|EGK47848.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB210]
gi|395525571|gb|EJG13660.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC137]
gi|395557459|gb|EJG23460.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC143]
gi|395564978|gb|EJG26629.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC109]
gi|410403832|gb|EKP55906.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-2]
Length = 439
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 10 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 65
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 66 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 125
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 126 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 184
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 185 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 238
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 239 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 286
>gi|452954060|gb|EME59465.1| preprotein translocase subunit SecY [Rhodococcus ruber BKS 20-38]
Length = 437
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 34/335 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 208
++RR++ V L+ + R+G +P PG D R I Q +G S+ L GA L
Sbjct: 13 DLRRKILVALGLVALYRLGATLPSPGVDYGNVRACIDQLSGGDSAGIYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A+L++
Sbjct: 73 QLSVFAIGIMPFITASIIVQLLTVVIPRFEELRKEGQAGQAKMTQYTRYLAVALAVLQST 132
Query: 269 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
IVA + + A S+ ++V ++ GA + W + I+E G G G S+
Sbjct: 133 GIVALAARGQLLQGCSEPILADDSIFGMVVIVLVMTAGAALVMWFGELITERGVGNGMSI 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I GI + +L R +L V +V V V +G R++ +QY
Sbjct: 193 LIFAGIASRLPSEGRTILES------RGGLVFTIVLVVALVVITGVVFVEQGQRRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------P 435
+ S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 247 AKRMVGRRMYGGS-----STYLPLKVNQAGIIPVIFASSLLYLPNLIAQLTGATSATDPS 301
Query: 436 FWQHV--KEILNPETSVGARPWVYYTIYAFFVFLF 468
+WQ + + ++NP V +Y+ + FFVF +
Sbjct: 302 WWQRIINEYLVNPNNPV--YIAIYFGLIVFFVFFY 334
>gi|443468480|ref|ZP_21058692.1| Preprotein translocase secY subunit [Pseudomonas pseudoalcaligenes
KF707]
gi|442897642|gb|ELS24521.1| Preprotein translocase secY subunit [Pseudomonas pseudoalcaligenes
KF707]
Length = 442
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 148/303 (48%), Gaps = 21/303 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAELFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + +A+ V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSVGLAGQGVAFASDFGFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPSAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFW-QHVKEI 443
+ ++P +N +G+ P + + +L FP+ L + G S W Q V +
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSESMGWLQDVAQA 304
Query: 444 LNP 446
+ P
Sbjct: 305 IAP 307
>gi|378953163|ref|YP_005210651.1| SecY protein [Pseudomonas fluorescens F113]
gi|359763177|gb|AEV65256.1| SecY [Pseudomonas fluorescens F113]
Length = 428
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 2 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 59
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y ++++ A+++AV
Sbjct: 60 MSIFALGIMPYISASIIMQLMSAVSPQLEQLKKEGEAGRRKISQYTRYLTVVLALVQAVG 119
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 120 MSIGLAGQGVAFTGDFGFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 177
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 178 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 230
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 231 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 277
>gi|340359398|ref|ZP_08681884.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 448
str. F0400]
gi|339884719|gb|EGQ74487.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 448
str. F0400]
Length = 430
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 34/338 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI------PQDYLSFVSGSVDELG 202
++F ++R +L T ++ + R+G +P PG D + QD +G ++ +
Sbjct: 7 QAFRTPDLRSKLLFTLGIMALFRLGSILPTPGVDMANVQKCIGESQD-----AGLLNLIN 61
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
F GA L+LS F LGI P I ASI++Q+L ++P +L KEG G K+ Y ++++
Sbjct: 62 IFSGGALLQLSVFALGIMPYITASIIIQLLRVVIPHFEELYKEGQSGTAKLTEYTRYLTI 121
Query: 261 GFAILEAVIVACYSLPYSIY-------AASHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
G +L++ + + ++ + S ++ V + G + W+ + I+E
Sbjct: 122 GLGVLQSATIVATAANGKLFQNCSVSVVPNDSALNMAVMVVTMTAGTGLIMWLGELITEK 181
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G SL+I I+ + L+ ++ G S L ++ V + T+ V + +
Sbjct: 182 GIGNGMSLLIFTSIVARMPQNLFSIIGGNGGVSK-----FLAVVAVILVATIAVVFIEQA 236
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY K R+ T YIP IN +G+ PV+ + +L+ P ++A G
Sbjct: 237 TRRIPVQYA--KRMVGRRQYGGSTT---YIPIKINTAGVIPVIFASSILSMPQLVAQ-FG 290
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
SP V+ I + ++ VY Y + F F
Sbjct: 291 SPASSWVQWI---DKNLQQTAPVYLVGYGVLILFFTFF 325
>gi|170077667|ref|YP_001734305.1| preprotein translocase subunit SecY [Synechococcus sp. PCC 7002]
gi|169885336|gb|ACA99049.1| preprotein translocase SecY subunit [Synechococcus sp. PCC 7002]
Length = 439
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 166/341 (48%), Gaps = 34/341 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDE 200
A E+F + + +R RL VT L+V+ R G FIP+PG DR + + S + G +D
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQNSPLLGFLDV 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
G + F LGI P I ASI+MQ++ +P+L ++K +G G KI I +++
Sbjct: 70 FAGGGLS-AVGIFALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKISQIIRYVT 128
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+G+A L++ + L YA V+ T L G++ + WI + I+E G G G+
Sbjct: 129 VGWAALQSFGITLQIL--RPYALDPGFTFVLETTLALTAGSVFVMWISELITEKGLGNGA 186
Query: 320 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
SL+I V I+ TL + +Q G +V + LL VF I+ + V V EG R++
Sbjct: 187 SLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVIL--LLVVFLIMIVGIVFVQEGTRRI 244
Query: 378 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
+ SA R+ E Y+P +N G+ P++ + +L PS LA + GS
Sbjct: 245 -------PIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSG 297
Query: 436 ---FWQHVKEI---LNPETSVGARPW--VYYTIYAFFVFLF 468
F Q + I L P G P+ VY + FF + +
Sbjct: 298 EGFFGQAIATISTLLQP----GRIPYVLVYLALILFFSYFY 334
>gi|358010441|ref|ZP_09142251.1| preprotein translocase subunit SecY [Acinetobacter sp. P8-3-8]
Length = 452
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ I R +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIHRLMFLIGALVVF-RLGAHIPLPGIDNVALER---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 G-IGMCAGLISQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L ++ Q S ++GL G+ +I + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLVIQAFTSVDNGQSSLIGLAVFGLLSIAVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|296141077|ref|YP_003648320.1| preprotein translocase subunit SecY [Tsukamurella paurometabola DSM
20162]
gi|296029211|gb|ADG79981.1| preprotein translocase, SecY subunit [Tsukamurella paurometabola
DSM 20162]
Length = 439
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 157/340 (46%), Gaps = 36/340 (10%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGDF 204
F ++RR++ + ++V+ R G +P PG + R + + +G S+ +
Sbjct: 9 FRTPDLRRKILIVLGILVLYRFGATLPSPGVNFRNVSECVDDLANGANADVYSLINMFSG 68
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+LS F +GI P I ASI++Q+L ++P LRKEG G KI Y ++++ A+
Sbjct: 69 GALLQLSVFAIGIMPYITASIIVQLLMVVIPRFETLRKEGQAGQAKITQYTRYLTVALAL 128
Query: 265 LEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
L+A + + S+ + ++V + GA+ + W + I+E G G
Sbjct: 129 LQATAIVAMASRGSLLQGCTKPILDKTDIFSLIVIVITMTAGAVLVMWFGELITERGIGN 188
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G SL+I GI + +L G + F L L VF I+ + V V +G R+V
Sbjct: 189 GMSLLIFAGIASRLPADGQNILQSQGGLT-----FGLVLFAVFLII-IAVVFVEQGQRRV 242
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----G 433
+QY + S Y+P +N +G+ PV+ + LL P ++ ++
Sbjct: 243 PVQYAKRMVGRKMYGGS-----STYLPLKVNTAGVIPVIFASSLLYLPQLIIQLVSGGQS 297
Query: 434 SPFW-QHVK-EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ W Q ++ ++NP + WV+ +Y + F F
Sbjct: 298 TAGWVQWIQTNLVNPGS------WVHIAVYFALIIFFTYF 331
>gi|254470026|ref|ZP_05083430.1| preprotein translocase, SecY subunit [Pseudovibrio sp. JE062]
gi|374332201|ref|YP_005082385.1| SecY protein [Pseudovibrio sp. FO-BEG1]
gi|211960337|gb|EEA95533.1| preprotein translocase, SecY subunit [Pseudovibrio sp. JE062]
gi|359344989|gb|AEV38363.1| SecY protein [Pseudovibrio sp. FO-BEG1]
Length = 446
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 23/301 (7%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L+S LN +A F K+E +++R++ T +++ R G +IPLPG + + Q + + +G
Sbjct: 7 QLASNLNFSA--FAKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFGNVQTGI 64
Query: 198 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
V F GA +++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y
Sbjct: 65 VGLFNMFSGGAVERMAIFALGIMPYISASIIIQLMTSVVPTLEQLKKEGEQGRKKINQYT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTI 310
+ ++ A +A Y + + A ++ V + T LV G M + W+ + I
Sbjct: 125 RFGTVILATFQA-----YGISVGLEAGTNIVIDPGWFFRIATVLTLVGGTMFLMWLGEQI 179
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
+ G G G SLII GI+ G + L +L P +L ++ + ++V + +V
Sbjct: 180 TSRGIGNGISLIIFAGIVAGLPSAIASTL-ELGRQGALATPIILAVV-ILSVVVIGVIVF 237
Query: 371 TE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
E R++ +QY + + E + ++P +N +G+ P + + LL P+ ++
Sbjct: 238 MERAQRRLLIQYPRRQQGNKMFEGN-----TSFLPLKLNTAGVIPPIFASSLLLVPATVS 292
Query: 430 S 430
S
Sbjct: 293 S 293
>gi|210611145|ref|ZP_03288759.1| hypothetical protein CLONEX_00949 [Clostridium nexile DSM 1787]
gi|210152132|gb|EEA83139.1| hypothetical protein CLONEX_00949 [Clostridium nexile DSM 1787]
Length = 451
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 149/290 (51%), Gaps = 10/290 (3%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
++F EIR+++F T ++ + R+G +P PG D I + + + + F G+
Sbjct: 7 KAFQIEEIRKKIFYTFAMLFVVRLGSQLPTPGVDPTFIQNFFANQTGEAFNFFNAFTGGS 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S F L I+P I +SI+MQ+L +P L +++K+G +G +KI ++ ++++ A+++
Sbjct: 67 FEQMSIFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEEGRKKIAAFTRYVTVLLALIQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ +A S ++ + + L G+ + WI + I+E G G G S+++ +
Sbjct: 127 STAMAV-GFGRSGLLVEYNFVNAAIVVLTLTAGSAFLMWIGERITEKGVGNGISIVLLIN 185
Query: 327 ILTGYTETLYKMLSQLL-GSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
IL+ + + +Q + G S+ ++ + V ++ + + +G RK+ +QY
Sbjct: 186 ILSRIPDDFNTLYTQFMKGKSLATAGLAAFIIVAIILAVIVFVIFLQDGQRKIAVQY--- 242
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + + +IP +N +G+ PV+ + L+ FP ++AS LG
Sbjct: 243 --SQKIQGRKNVGGQSTFIPLKVNTAGVIPVIFASSLMQFPIVIASFLGK 290
>gi|344941035|ref|ZP_08780323.1| preprotein translocase, SecY subunit [Methylobacter tundripaludum
SV96]
gi|344262227|gb|EGW22498.1| preprotein translocase, SecY subunit [Methylobacter tundripaludum
SV96]
Length = 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 38/336 (11%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL + R+G IP+PG D + + + SGS+ ++ + GA ++L
Sbjct: 16 SELKARLLFVLGAFFVYRVGAHIPVPGIDPKALAVMFEQ-QSGSILDMFNMFSGGALMRL 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI+MQ++ ++P++ QL+KEG G KI Y + ++ A +A+ +
Sbjct: 75 SLFALGIMPYISASIIMQLMTVVIPAMEQLKKEGESGRRKISQYTRFGTVVLATFQAIGI 134
Query: 271 ACYSLPYSIYAA-----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ +L S + +++T LV G + + W+ + ++E G G G SLII
Sbjct: 135 SL-ALQNQTAGGLSVVLSPGMSFIVITTVTLVAGTVFLMWLGEQVTERGIGNGISLIIFA 193
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 381
GI++G + + L +L + F++ L + VT V V G R++ + Y
Sbjct: 194 GIVSGLPKAIGGTL-ELARTGEMNGAFIILLFLLSISVTALVVFVERGQRRILINYPKRQ 252
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FW 437
G K+ + ++P +N +G+ P + + ++ FP+ +A G+ +
Sbjct: 253 QGRKMYAGQSS---------FLPLKLNMAGVIPPIFASSIILFPATIAGWFGNSEGFTWL 303
Query: 438 QHVKEILNPETSVGARPWVYYTIYA----FFVFLFN 469
Q V +L+P +P VY YA FF F +
Sbjct: 304 QDVATMLSP-----GQP-VYVIFYATAIVFFCFFYT 333
>gi|302877821|ref|YP_003846385.1| preprotein translocase subunit SecY [Gallionella capsiferriformans
ES-2]
gi|302580610|gb|ADL54621.1| preprotein translocase, SecY subunit [Gallionella capsiferriformans
ES-2]
Length = 438
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 157/343 (45%), Gaps = 29/343 (8%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 199
+S V +A ++ + R F+ L+V RIG IP+PG D ++ + + +G +
Sbjct: 1 MSKVAKDAPKAKYGDLSTRLWFLLGALVVF-RIGAHIPVPGIDPVVLADLFKTQKNGILG 59
Query: 200 ELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F GA + + F LGI P I ASI+MQ+ VP L QL+KEG G KI Y +
Sbjct: 60 MFNMFSGGALSRFTIFALGIMPYISASIIMQLASIAVPYLEQLKKEGESGRRKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISE 312
+LG A+ ++ + + ++ A V H M T LV G M + W+ + I+E
Sbjct: 120 GTLGLAVFQS-----FGISVALQAQPGLVLHPGSMFQMTTMITLVTGTMFLMWLGEQITE 174
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SLII GI G + L +L + P +L L VT V V
Sbjct: 175 RGLGNGISLIIFAGIAAGLPSAIGSTL-ELARTGAFSIPLVLFLFVGAIAVTALVVFVER 233
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
G RK+ + Y ++ + ++P +N +G+ P + + ++ FP+ +A
Sbjct: 234 GQRKILVNYAKRQVGNRVYGGQ-----SSHLPLKLNMAGVIPPIFASSIILFPATIAGWF 288
Query: 433 GSP----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G+ + + ++L+P +P +Y YA + F F
Sbjct: 289 GNSQGMGWLKDASQMLSP-----GQP-IYVLAYASAILFFCFF 325
>gi|339504835|ref|YP_004692255.1| preprotein translocase subunit SecY [Roseobacter litoralis Och 149]
gi|338758828|gb|AEI95292.1| preprotein translocase subunit SecY [Roseobacter litoralis Och 149]
Length = 454
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 23/290 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 209
+++R R+ T L+++ R+G FIP+PG D R + Q G + + GA +
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGI--GGMVSMFTGGALGR 78
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+ F LGI P I ASI++Q++ +VP L L+KEG G +KI Y + ++ A L+A
Sbjct: 79 MGIFALGIMPYISASIIVQLMTAMVPKLEALKKEGEQGRKKINQYTRYGTVFLATLQA-- 136
Query: 270 VACYSLPYSIYAASHSVKHVMV----TAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
Y L S+ A M LV G M + W+ + I+ G G G SLII V
Sbjct: 137 ---YGLAVSLEAGDIVTDPGMFFRASCVITLVGGTMFLMWLGEQITARGIGNGISLIIFV 193
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ + + + G S P ++G++ + + M+ V + RK+ +QY
Sbjct: 194 GIIAEVPAAMAQFFAS--GRSGAISPAVIIGVILMVILTIMFVVFMERALRKIHIQYPRR 251
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
++ + ++P +NP+G+ P + + LL P +++ G+
Sbjct: 252 QVGMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGN 296
>gi|336053525|ref|YP_004561812.1| preprotein translocase subunit secY [Lactobacillus kefiranofaciens
ZW3]
gi|363805543|sp|F6CD01.1|SECY1_LACKZ RecName: Full=Protein translocase subunit SecY 1
gi|333956902|gb|AEG39710.1| Preprotein translocase subunit secY [Lactobacillus kefiranofaciens
ZW3]
Length = 431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 163/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGINVKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ LY++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLYQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q +++N S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFF 326
>gi|423097624|ref|ZP_17085420.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q2-87]
gi|423699615|ref|ZP_17674105.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q8r1-96]
gi|387996905|gb|EIK58235.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q8r1-96]
gi|397885840|gb|EJL02323.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q2-87]
Length = 442
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMSAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + A S V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVSFTADFSFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 291
>gi|110812356|gb|ABG91712.1| preprotein translocase, SecY subunit [Shewanella putrefaciens 200]
Length = 446
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 15/296 (5%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L +A F SE++ RL I++ R G F+P+PG D ++ + + SG++ + +
Sbjct: 8 LKSAKGGF--SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QSGTILSMFN 64
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y W +L
Sbjct: 65 MFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTL 124
Query: 261 GFAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++V +A LP + + V LV G M + W+ + I+E G G G
Sbjct: 125 VLGTFQSVGIAT-GLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNG 183
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
S++I GI+ G + + Q + +L + VF VT + V V G R++
Sbjct: 184 ISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFA-VTYFVVFVERGQRRIV 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ Y A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 243 VNY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|46143637|ref|ZP_00134836.2| COG0201: Preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209243|ref|YP_001054468.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165977216|ref|YP_001652809.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190151134|ref|YP_001969659.1| Preprotein translocase secY subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250032|ref|ZP_07336234.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303253206|ref|ZP_07339355.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248850|ref|ZP_07530863.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307253464|ref|ZP_07535335.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307257878|ref|ZP_07539634.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262274|ref|ZP_07543923.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264483|ref|ZP_07546068.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126098035|gb|ABN74863.1| Preprotein translocase secY subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165877317|gb|ABY70365.1| preprotein translocase SecY subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189916265|gb|ACE62517.1| Preprotein translocase secY subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302647888|gb|EFL78095.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651095|gb|EFL81249.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854777|gb|EFM86967.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306859143|gb|EFM91185.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863608|gb|EFM95535.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306868037|gb|EFM99864.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870180|gb|EFN01939.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 138/276 (50%), Gaps = 18/276 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIVQLLTAIHPPLAELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISI-AL 138
Query: 276 PYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + + S+ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVADLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
T+ + + Q + P +L L+ + VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARQGEIS--PLVLLLVAIIAFAVTYFVVFVERGQRRIVVNY-------ASRQ 249
Query: 393 DSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 250 QGRMMAPARSSHLPLKVNMAGVIPAIFASSIILFPA 285
>gi|426411760|ref|YP_007031859.1| preprotein translocase subunit SecY [Pseudomonas sp. UW4]
gi|426269977|gb|AFY22054.1| preprotein translocase subunit SecY [Pseudomonas sp. UW4]
Length = 442
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + A S V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVSFTADFSFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 291
>gi|225010537|ref|ZP_03701008.1| preprotein translocase, SecY subunit [Flavobacteria bacterium
MS024-3C]
gi|225005366|gb|EEG43317.1| preprotein translocase, SecY subunit [Flavobacteria bacterium
MS024-3C]
Length = 447
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E++ R+ VT L+++ R G I LPG D + Q + SG + L F GA S
Sbjct: 15 EELKGRILVTLSLLLVYRFGAQIVLPGIDTTQLAQLTSNTDSGILGILNAFTGGAFANAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI-- 269
F LGI P I ASI++Q++ +P L +L+KEG G + I W+++G +++A
Sbjct: 75 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIGICVVQAPAYL 134
Query: 270 --VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ +P S + + ++ + +LV G + W+ + I++ G G G SL+I VGI
Sbjct: 135 YSLGALGVPDSAFVLGKGLDFIIPSVVILVTGTVFAMWLGEKITDKGIGNGISLLIMVGI 194
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ ++ + ++ F+L + ++ +V + +V++ R++ +QY +
Sbjct: 195 IANMPQSFVQEFISRTSTTSGGLMFVLIEVILWFLVILGSVLLVMATRQIPVQYA--RRT 252
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
++ D YIP +N SG+ P++ ++ P +L
Sbjct: 253 ASGGFDKNAVGTRQYIPLKLNASGVMPIIFAQAIMFAPGLLGK 295
>gi|428301921|ref|YP_007140227.1| protein translocase subunit SecY [Calothrix sp. PCC 6303]
gi|428238465|gb|AFZ04255.1| protein translocase subunit secY/sec61 alpha [Calothrix sp. PCC
6303]
Length = 437
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 153/308 (49%), Gaps = 28/308 (9%)
Query: 124 RSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR 183
R KP+ ++ F+ + + +R RL VT ++++ R+G IP+P DR
Sbjct: 4 RDKPQSAQDTFMQMAQAAG-------------LRGRLLVTVGILMLIRMGIHIPIPNIDR 50
Query: 184 RLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLR 241
L D ++ S + L F G L F LGI P I ASI++Q+L +PSL L+
Sbjct: 51 -LAFADAVAKNSQILSFLDIFSGGGLSALGIFALGILPYINASIIIQLLTAAIPSLENLQ 109
Query: 242 K-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGA 300
K EG G K+ Y ++S G+AIL++V +A + L YA + V TA LV G+
Sbjct: 110 KNEGEAGRRKLSQYTRYVSFGWAILQSVFIAGFWL--KPYAYNFGPLFVAQTAIALVAGS 167
Query: 301 MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVF 360
M + W + I+E G G G+SL+I + I+ +TL +S + + ++ L+ +F
Sbjct: 168 MFVMWASEVITERGIGNGASLLIFLNIVASLPKTLGDTISFVETGNREAVGRVIVLVLLF 227
Query: 361 TIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTT 418
+ T+ V V EG R++ + SA R+ + E ++P +N G+ P++
Sbjct: 228 LLTTVGIVFVQEGMRRI-------PIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFA 280
Query: 419 TYLLAFPS 426
+L+ P
Sbjct: 281 QAILSLPQ 288
>gi|332853159|ref|ZP_08434596.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013150]
gi|332868595|ref|ZP_08438251.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013113]
gi|332876063|ref|ZP_08443847.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6014059]
gi|384133268|ref|YP_005515880.1| Secretion protein [Acinetobacter baumannii 1656-2]
gi|417577578|ref|ZP_12228423.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-17]
gi|421629012|ref|ZP_16069762.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC180]
gi|421654738|ref|ZP_16095065.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-72]
gi|421661190|ref|ZP_16101367.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC110]
gi|421665765|ref|ZP_16105871.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC087]
gi|421695650|ref|ZP_16135255.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-692]
gi|421796547|ref|ZP_16232607.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-21]
gi|421803922|ref|ZP_16239834.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-694]
gi|425753957|ref|ZP_18871824.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-113]
gi|445398174|ref|ZP_21429545.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-57]
gi|445456188|ref|ZP_21445722.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC047]
gi|445463833|ref|ZP_21449368.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC338]
gi|445478654|ref|ZP_21454777.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-78]
gi|322509488|gb|ADX04942.1| Secretion protein [Acinetobacter baumannii 1656-2]
gi|332728828|gb|EGJ60187.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013150]
gi|332733272|gb|EGJ64466.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013113]
gi|332735681|gb|EGJ66724.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6014059]
gi|395570799|gb|EJG31461.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-17]
gi|404565168|gb|EKA70338.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-692]
gi|408510509|gb|EKK12171.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-72]
gi|408703871|gb|EKL49251.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC180]
gi|408716039|gb|EKL61160.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC110]
gi|410389499|gb|EKP41911.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC087]
gi|410398796|gb|EKP51002.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-21]
gi|410412388|gb|EKP64247.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-694]
gi|425497350|gb|EKU63456.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-113]
gi|444774727|gb|ELW98803.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-78]
gi|444778719|gb|ELX02729.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC047]
gi|444780182|gb|ELX04148.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC338]
gi|444783933|gb|ELX07770.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-57]
Length = 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 239
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 287
>gi|256821682|ref|YP_003145645.1| preprotein translocase subunit SecY [Kangiella koreensis DSM 16069]
gi|256795221|gb|ACV25877.1| preprotein translocase, SecY subunit [Kangiella koreensis DSM
16069]
Length = 446
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 30/340 (8%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
+A+S E+++RL + I++ RIG FIP+PG D ++ Q +L G++ + +
Sbjct: 6 QQSAKSGGLGELKQRLLFVLMAIIVFRIGSFIPVPGVDGSVL-QAFLENQGGTIFTMFNV 64
Query: 205 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA + S F LGI P I ASI+MQ+L + P L +++KEG G KI Y ++++
Sbjct: 65 FSGGALERASVFALGIMPYISASIIMQILSFVDPRLKEIKKEGESGRRKINQYTRYLTVA 124
Query: 262 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A ++AV ++ LP I A+ + LV G M + W+ + I+E G G G
Sbjct: 125 LATIQAVGMST-QLPGLIPGLVANPDFSFYFIAVVTLVTGTMFLMWLGEQITERGIGNGI 183
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTE-GCRK 376
S+II VGI+ G+ + + ++ S +LG+L GVF + ++ +V E R+
Sbjct: 184 SIIILVGIVAGFPQAIAQIFSDAYDGDRN----ILGVLVFGVFALAVVYFIVWFERAQRR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ + Y A + + ++P +N +G+ P + + ++ FP L S GS
Sbjct: 240 ITINY-----AKRQQGNKVFAAQSSFLPMKLNMAGVIPAIFASSIVLFPGTLLSWFGSGS 294
Query: 435 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + L P +P VY +YA + F F
Sbjct: 295 GEVSWLTTMAQNLQP-----GKP-VYIMLYAVGIIFFAFF 328
>gi|387122504|ref|YP_006288386.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-TJ]
gi|407934163|ref|YP_006849806.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TYTH-1]
gi|421204427|ref|ZP_15661553.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC12]
gi|421535345|ref|ZP_15981606.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC30]
gi|424050879|ref|ZP_17788415.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab11111]
gi|424058576|ref|ZP_17796073.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab33333]
gi|424062046|ref|ZP_17799533.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab44444]
gi|193078465|gb|ABO13458.2| secretion protein [Acinetobacter baumannii ATCC 17978]
gi|385876996|gb|AFI94091.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
MDR-TJ]
gi|398326108|gb|EJN42260.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC12]
gi|404665818|gb|EKB33780.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab33333]
gi|404669632|gb|EKB37525.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab11111]
gi|404674458|gb|EKB42206.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab44444]
gi|407902744|gb|AFU39575.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TYTH-1]
gi|409986708|gb|EKO42900.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC30]
Length = 450
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 21 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 76
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 77 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 136
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 137 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 195
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 196 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 249
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 250 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 297
>gi|29831489|ref|NP_826123.1| preprotein translocase subunit SecY [Streptomyces avermitilis
MA-4680]
gi|29608604|dbj|BAC72658.1| putative preprotein translocase SecY subunit [Streptomyces
avermitilis MA-4680]
Length = 438
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 158/343 (46%), Gaps = 24/343 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + S G+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRLGTHIPIPGVDYKNVQTCIDSASKGNQGLFG 60
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 120
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 308
+++ AIL+ + + +++ ++ T +++C G + W+ +
Sbjct: 121 LTVALAILQGTGLVATARSGALFGTCPVGNQIVPDQGIFTTITMVICMTAGTAVVMWLGE 180
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 181 LITDRGIGNGMSILMFISIAASFPSALWAIKQQ--GSLADGWIEFGTVIAVGLVMVGLVV 238
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 293
Query: 429 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A S K + + G P +Y T Y + F F
Sbjct: 294 AQF--SKDTSGWKSWIEQNLTKGDHP-IYITAYFLLIVFFAFF 333
>gi|381158299|ref|ZP_09867532.1| preprotein translocase, SecY subunit [Thiorhodovibrio sp. 970]
gi|380879657|gb|EIC21748.1| preprotein translocase, SecY subunit [Thiorhodovibrio sp. 970]
Length = 450
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 12/287 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+E+R+RL +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 19 TELRQRLMFVLGALLVYRIGTFIPVPGVNPEALAALFDQNQGSILDMFNMFSGGALQRAS 78
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
LGI P I ASI+MQ++ ++P L QL+KEG G KI Y + ++ A +A+ ++
Sbjct: 79 ILALGIMPYISASIIMQLMSSVIPQLEQLKKEGEAGRRKITQYTRYGTVVLASFQAIGIS 138
Query: 272 C----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ S +H V V A LV G M + W+ + I+E G G G SLII GI
Sbjct: 139 MALQGQTAGGSAIVVTHGVGFVFTAAVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGI 198
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ G + L +L+ + +L L + +VT + V V G R++ + Y A
Sbjct: 199 VAGLPSAVGGTL-ELVRTGEMNAIAVLALFALALLVTAFVVFVERGQRRITVNY-----A 252
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + ++P +N +G+ P + + ++ FP L G
Sbjct: 253 RRQQGRKMMAAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGQ 299
>gi|307251078|ref|ZP_07533002.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306856908|gb|EFM89040.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 138/276 (50%), Gaps = 18/276 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ ++ +L
Sbjct: 80 GIMPYISASIIVQLLTAIHPPLAELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISI-AL 138
Query: 276 PYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P + + S+ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVADLPA 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
T+ + + Q + P +L L+ + VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARQGEIS--PLVLLLVAIIAFAVTYFVVFVERGQRRIVVNY-------ASRQ 249
Query: 393 DSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 250 QGRMMAPARSSHLPLKVNMAGVIPAIFASSIILFPA 285
>gi|374587569|ref|ZP_09660661.1| protein translocase subunit secY/sec61 alpha [Leptonema illini DSM
21528]
gi|373876430|gb|EHQ08424.1| protein translocase subunit secY/sec61 alpha [Leptonema illini DSM
21528]
Length = 457
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 160/347 (46%), Gaps = 52/347 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI----PQ-----DYLSFVSGSVDELGDFG 205
E+R++L T ++++ R+G FI +PG + + PQ D + SG G
Sbjct: 12 ELRKKLLFTVAVLLLFRLGSFITIPGVNPIAVAEAKPQGQSILDVVDVFSG--------G 63
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A KLS F LGI P I +SI+M +L I+P + +L++EG G KI Y ++ +
Sbjct: 64 ALFKLSIFSLGIMPYISSSIIMSLLTVIIPQMARLQREGEAGRRKINQYTRMGTVVLCAV 123
Query: 266 EAVIVACYSLPYSIYAASHSVKHVMVTAFL-------LVCGAMTMSWICDTISESGFGQG 318
+A+ + +++ + V M A + G + + W+ + I+E G G G
Sbjct: 124 QAMFILIWAVEQTSRTGKPLVSAEMSRALFYSTGVVTITTGTLILMWLGEQITERGIGNG 183
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG-VFTIVTMWAVVVTEGCRKV 377
+SLII GI+ + + M+ S++ PF + +LG VF ++ V++T+G RK+
Sbjct: 184 ASLIIFAGIIARLPKNIMDMIRD---DSIK--PFDILILGIVFILLIALTVILTQGVRKI 238
Query: 378 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
LQY G ++ A + + F +N + + P++ + LL FP + +L
Sbjct: 239 PLQYGKKMQGRRMVQAQSQS---------LSFKLNSASVMPIIFASSLLLFPQTVLGMLA 289
Query: 434 ---------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S Q ++ L+P + YY IY + F F
Sbjct: 290 GDGSGQTTVSWLAQQMQVWLDPFAPSFVKQLPYYFIYTVLIIFFAYF 336
>gi|333898859|ref|YP_004472732.1| preprotein translocase subunit SecY [Pseudomonas fulva 12-X]
gi|333114124|gb|AEF20638.1| preprotein translocase, SecY subunit [Pseudomonas fulva 12-X]
Length = 442
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFMAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 267
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L A ++A
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAFVQAIG 133
Query: 268 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V +A + +S+ H V VT F V GAM M W+ + I+E G G G S++I
Sbjct: 134 MSVGLASQGVAFSVDFGFH---FVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFA 188
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ G + + + + + +GLL V I + V + G R++ + Y
Sbjct: 189 GIVAGLPSAIGQSFESARQGDINIFALIAIGLLAVAII--GFVVFIERGQRRIAVHY--- 243
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + LL FP+ L + G
Sbjct: 244 --AKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSLLLFPASLGAWFGQ 291
>gi|169632370|ref|YP_001706106.1| preprotein translocase subunit SecY [Acinetobacter baumannii SDF]
gi|169151162|emb|CAO99834.1| secretion protein [Acinetobacter baumannii]
Length = 452
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|428203670|ref|YP_007082259.1| preprotein translocase subunit SecY [Pleurocapsa sp. PCC 7327]
gi|427981102|gb|AFY78702.1| preprotein translocase, SecY subunit [Pleurocapsa sp. PCC 7327]
Length = 438
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 166/342 (48%), Gaps = 35/342 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 200
A E+F + + +R RL +T L+++ R G IP+PG DR D + + G D
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITLGLLILVRFGISIPIPGIDRARFSADIANLPIFGIFDF 69
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 259
L G + + F LGI P I ASI+MQ+L +P+L L+K EG G KI +++
Sbjct: 70 LTGGGLK-AVGLFALGILPYINASIIMQLLAAAIPALEDLQKNEGEAGRRKISQITRYVA 128
Query: 260 LGFAILEAVIVACYSL-PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
LG+AI++++ + L PY+I ++ V T L G+M + W+ + I+E G G G
Sbjct: 129 LGWAIIQSLGITIGLLRPYAI---NYGFWFVAQTVLALTAGSMFVMWVSELITERGIGNG 185
Query: 319 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 376
+SL+I + I+ +TL L+Q G +L L+ + TI+ + V V EG R+
Sbjct: 186 ASLLIFLNIVAVLPKTLGDTIDLAQTGGRDTIAKVVLLLLVFLVTIIMI--VFVQEGTRR 243
Query: 377 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG- 433
+ + SA R+ E Y+P +N G+ P++ + +L PS LA +
Sbjct: 244 I-------PIVSARRQVGKRLYRERTSYLPLRLNQGGVMPIIFASAVLFLPSTLAGLFSN 296
Query: 434 ----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S V L P + W+Y +Y+ + F+ F
Sbjct: 297 QGNISQALVQVANTLQPGS------WIYIAVYSLMIIFFSYF 332
>gi|15674307|ref|NP_268480.1| preprotein translocase subunit SecY [Streptococcus pyogenes SF370]
gi|19745261|ref|NP_606397.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS8232]
gi|21909596|ref|NP_663864.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS315]
gi|28894974|ref|NP_801324.1| preprotein translocase subunit SecY [Streptococcus pyogenes SSI-1]
gi|71909878|ref|YP_281428.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS5005]
gi|139472947|ref|YP_001127662.1| preprotein translocase subunit SecY [Streptococcus pyogenes str.
Manfredo]
gi|161761326|ref|YP_059431.2| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS10394]
gi|162139091|ref|YP_595796.2| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS9429]
gi|162139139|ref|YP_599663.2| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS2096]
gi|162139192|ref|YP_601562.2| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS10750]
gi|162139415|ref|YP_279532.2| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS6180]
gi|209558647|ref|YP_002285119.1| preprotein translocase subunit SecY [Streptococcus pyogenes NZ131]
gi|306828240|ref|ZP_07461500.1| preprotein translocase subunit SecY [Streptococcus pyogenes ATCC
10782]
gi|383479270|ref|YP_005388164.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS15252]
gi|383493194|ref|YP_005410870.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS1882]
gi|386361943|ref|YP_006071274.1| preprotein translocase subunit secY [Streptococcus pyogenes Alab49]
gi|410679756|ref|YP_006932158.1| preprotein translocase subunit SecY [Streptococcus pyogenes A20]
gi|417855932|ref|ZP_12500991.1| preprotein translocase subunit SecY [Streptococcus pyogenes HKU
QMH11M0907901]
gi|13621388|gb|AAK33202.1| putative preprotein translocase [Streptococcus pyogenes M1 GAS]
gi|19747356|gb|AAL96896.1| putative preprotein translocase [Streptococcus pyogenes MGAS8232]
gi|21903777|gb|AAM78667.1| putative preprotein translocase [Streptococcus pyogenes MGAS315]
gi|28810219|dbj|BAC63157.1| putative preprotein translocase [Streptococcus pyogenes SSI-1]
gi|71852660|gb|AAZ50683.1| protein translocase subunit [Streptococcus pyogenes MGAS5005]
gi|134271193|emb|CAM29406.1| preprotein translocase SecY subunit [Streptococcus pyogenes str.
Manfredo]
gi|209539848|gb|ACI60424.1| Preprotein translocase secY subunit [Streptococcus pyogenes NZ131]
gi|304429551|gb|EFM32600.1| preprotein translocase subunit SecY [Streptococcus pyogenes ATCC
10782]
gi|350276352|gb|AEQ23720.1| preprotein translocase subunit secY [Streptococcus pyogenes Alab49]
gi|378927260|gb|AFC65466.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS15252]
gi|378928922|gb|AFC67339.1| preprotein translocase subunit SecY [Streptococcus pyogenes
MGAS1882]
gi|387932887|gb|EIK41000.1| preprotein translocase subunit SecY [Streptococcus pyogenes HKU
QMH11M0907901]
gi|395453106|dbj|BAM29445.1| preprotein translocase subunit [Streptococcus pyogenes M1 476]
gi|409692345|gb|AFV37205.1| preprotein translocase, SecY subunit [Streptococcus pyogenes A20]
Length = 434
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 164/339 (48%), Gaps = 50/339 (14%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 126
Query: 268 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A + +L + +K ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 376
GI++ + + + S + ++G+L I+ + A+V V + K
Sbjct: 187 GIISSIPSAIATIREDYFVNVKASDLHSSYLIVGIL----IIAVLAIVFFTTYVQQAEYK 242
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ +QY KL A S Y+P +NP+G+ PV+ + + PS + + +
Sbjct: 243 IPIQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGR 293
Query: 435 --PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++EI N +T VG +YA + LF+ F
Sbjct: 294 DLPWLNRLQEIFNYQTPVG------MIVYALLIILFSFF 326
>gi|374337107|ref|YP_005093805.1| Preprotein translocase SecY subunit [Streptococcus macedonicus
ACA-DC 198]
gi|372283205|emb|CCF01361.1| Preprotein translocase SecY subunit [Streptococcus macedonicus
ACA-DC 198]
Length = 434
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 168/340 (49%), Gaps = 50/340 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 207
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGEVPFLNMLNLVSG--NAMSNF--- 68
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYISLVLAFVQ 125
Query: 267 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 325 VGILTGYTE---TLYKML------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
GI++ + T+Y+ S LL S + F+ L+ + + V +
Sbjct: 186 AGIISSIPKAISTIYEDFFVNVRSSDLLSS----YIFVALLIVAVLAIVFFTTFVQQAEY 241
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 434
K+ +QY KL A S Y+P INP+G+ PV+ + + PS + ++ +
Sbjct: 242 KIPIQYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNG 292
Query: 435 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++ LN +T G +YA + LF+ F
Sbjct: 293 KDISWLTTLESFLNYQTPSG------MVVYAVLIILFSFF 326
>gi|58336649|ref|YP_193234.1| preprotein translocase subunit SecY [Lactobacillus acidophilus
NCFM]
gi|227903207|ref|ZP_04021012.1| preprotein translocase subunit SecY [Lactobacillus acidophilus ATCC
4796]
gi|58253966|gb|AAV42203.1| protein translocase [Lactobacillus acidophilus NCFM]
gi|227869012|gb|EEJ76433.1| preprotein translocase subunit SecY [Lactobacillus acidophilus ATCC
4796]
Length = 431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T +++I RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLIYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ L+++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL-TTTYLLAFPSILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ +++++ +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIITPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q ++LN S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVLNQIFSLQTTPGV--IIYTLLIILFTFF 326
>gi|398868930|ref|ZP_10624319.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM78]
gi|398232191|gb|EJN18166.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM78]
Length = 442
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y ++++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYLTVVLALVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + S V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVSFTGDFSFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFSGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 291
>gi|333991941|ref|YP_004524555.1| preprotein translocase SecY [Mycobacterium sp. JDM601]
gi|333487909|gb|AEF37301.1| preprotein translocase SecY [Mycobacterium sp. JDM601]
Length = 443
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 161/345 (46%), Gaps = 51/345 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-------SVDELGDFGAE 207
++RR++ +I+I R+G IP PG D + + Q + VSG S+ L GA
Sbjct: 13 DLRRKILFALGIIIIYRLGAAIPSPGVDYQNV-QQCIKEVSGGDAAQVYSLINLFSGGAL 71
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
L+L+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A+L+A
Sbjct: 72 LQLTVFAIGVMPYITASIIVQLLTVVIPRFEELRKEGQSGQNKMTQYTRYLTVALAVLQA 131
Query: 268 V-IVACY---------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
IVA SL + I A HS+ ++V ++ GA+ + W+ + I+E G G
Sbjct: 132 TSIVALAANGGLLQTCSLRHDII-ADHSIFTLVVIVMVMTAGAVLVMWLGELITERGIGN 190
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT------ 371
G SL+I VGI +L G VFT+V + A+V+
Sbjct: 191 GMSLLIFVGIAARIPIEGKTILDSRGGL-------------VFTMVCLAALVIVVGVVFV 237
Query: 372 -EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+G R++ +QY A Y+P +N +G+ PV+ + L+ P ++
Sbjct: 238 EQGQRRIPVQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPQLVTQ 292
Query: 431 I-------LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ +G+ +W + S VY+ + FF + +
Sbjct: 293 LVRSGSGGVGNSWWDKAVSTYLSDPSNLVYIAVYFGLIIFFTYFY 337
>gi|290958131|ref|YP_003489313.1| preprotein translocase subunit SecY [Streptomyces scabiei 87.22]
gi|260647657|emb|CBG70762.1| preprotein translocase SecY subunit [Streptomyces scabiei 87.22]
Length = 437
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 20/300 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF- 204
A +F ++R++L T +IVI RIG IP+PG D + D SG + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYTAVQFCIDQTKSNSGLFGLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTSKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L+ + + ++++ S+ +V + G + W+ + I++ G
Sbjct: 126 VLQGTGLVATARSGALFSQCPQANAIVPDDSIFTTLVMVVTMTAGTAVVMWLGELITDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWSIKEQ--GDLADGWIEFGIVIAVGLVMVALVVFVEQAQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + + + YIP +N +G+ PV+ + LL P+++ GS
Sbjct: 244 RRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVVQFSGS 298
>gi|162286719|ref|YP_001086060.2| preprotein translocase subunit SecY [Acinetobacter baumannii ATCC
17978]
gi|169794614|ref|YP_001712407.1| preprotein translocase subunit SecY [Acinetobacter baumannii AYE]
gi|184159578|ref|YP_001847917.1| preprotein translocase subunit SecY [Acinetobacter baumannii ACICU]
gi|215482203|ref|YP_002324385.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB307-0294]
gi|239503214|ref|ZP_04662524.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB900]
gi|260557047|ref|ZP_05829264.1| preprotein translocase, SecY subunit [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|301512039|ref|ZP_07237276.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB058]
gi|384144687|ref|YP_005527397.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-ZJ06]
gi|403674562|ref|ZP_10936809.1| preprotein translocase subunit SecY [Acinetobacter sp. NCTC 10304]
gi|417544362|ref|ZP_12195448.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC032]
gi|417550363|ref|ZP_12201442.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-18]
gi|417555158|ref|ZP_12206227.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-81]
gi|417570375|ref|ZP_12221232.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC189]
gi|417871986|ref|ZP_12516898.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH1]
gi|417875092|ref|ZP_12519913.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH2]
gi|417880084|ref|ZP_12524621.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH3]
gi|417883006|ref|ZP_12527275.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH4]
gi|421455845|ref|ZP_15905189.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-123]
gi|421621595|ref|ZP_16062511.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC074]
gi|421624597|ref|ZP_16065465.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC098]
gi|421633298|ref|ZP_16073935.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-13]
gi|421641633|ref|ZP_16082164.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-235]
gi|421647964|ref|ZP_16088375.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-251]
gi|421649978|ref|ZP_16090360.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC0162]
gi|421659645|ref|ZP_16099861.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-83]
gi|421669072|ref|ZP_16109100.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC099]
gi|421673738|ref|ZP_16113675.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC065]
gi|421680337|ref|ZP_16120192.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC111]
gi|421685817|ref|ZP_16125583.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-143]
gi|421690311|ref|ZP_16129982.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-116]
gi|421698351|ref|ZP_16137893.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-58]
gi|421704838|ref|ZP_16144279.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1122]
gi|421708617|ref|ZP_16147990.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1219]
gi|421788997|ref|ZP_16225265.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-82]
gi|421809465|ref|ZP_16245300.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC035]
gi|425748461|ref|ZP_18866448.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-348]
gi|445444286|ref|ZP_21442930.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-92]
gi|445489908|ref|ZP_21458916.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AA-014]
gi|169147541|emb|CAM85402.1| secretion protein [Acinetobacter baumannii AYE]
gi|183211172|gb|ACC58570.1| Preprotein translocase subunit SecY [Acinetobacter baumannii ACICU]
gi|213987239|gb|ACJ57538.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB307-0294]
gi|260409653|gb|EEX02954.1| preprotein translocase, SecY subunit [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|342223986|gb|EGT89059.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH1]
gi|342225881|gb|EGT90858.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH3]
gi|342226621|gb|EGT91583.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH2]
gi|342236751|gb|EGU01261.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH4]
gi|347595180|gb|AEP07901.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-ZJ06]
gi|395550823|gb|EJG16832.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC189]
gi|400212083|gb|EJO43045.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-123]
gi|400382250|gb|EJP40928.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC032]
gi|400386188|gb|EJP49262.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-18]
gi|400391575|gb|EJP58622.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-81]
gi|404564583|gb|EKA69762.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-116]
gi|404570844|gb|EKA75916.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-143]
gi|404572651|gb|EKA77693.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-58]
gi|407188931|gb|EKE60159.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1122]
gi|407189345|gb|EKE60571.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1219]
gi|408512377|gb|EKK14022.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC0162]
gi|408514385|gb|EKK15991.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-235]
gi|408516158|gb|EKK17737.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-251]
gi|408697504|gb|EKL43016.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC074]
gi|408701254|gb|EKL46693.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC098]
gi|408706758|gb|EKL52058.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-13]
gi|408706978|gb|EKL52272.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-83]
gi|410385956|gb|EKP38440.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC065]
gi|410389199|gb|EKP41614.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC099]
gi|410389706|gb|EKP42117.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC111]
gi|410399883|gb|EKP52064.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-82]
gi|410414362|gb|EKP66164.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC035]
gi|425491342|gb|EKU57627.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-348]
gi|444761931|gb|ELW86308.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-92]
gi|444766350|gb|ELW90625.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AA-014]
gi|452946326|gb|EME51825.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MSP4-16]
Length = 452
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|357636448|ref|ZP_09134323.1| preprotein translocase, SecY subunit [Streptococcus macacae NCTC
11558]
gi|357584902|gb|EHJ52105.1| preprotein translocase, SecY subunit [Streptococcus macacae NCTC
11558]
Length = 434
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 173/341 (50%), Gaps = 54/341 (15%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R+++F T +I + R+G I +PG + + + Q + L+ VSG + + +F
Sbjct: 15 VRKKIFFTIFIIFVFRVGTHITVPGINAKSLEQLSDLPFLNMLNLVSG--NAMSNF---- 68
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A L++
Sbjct: 69 --SVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFLQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V I A +S S+ + +V+ ++ +L G++ ++W+ D IS+ GFG G S+II
Sbjct: 127 VGITAGFSALSSVSLVKTPNVQTYLLIGAILTAGSVVVTWLGDQISDKGFGNGVSMIIFA 186
Query: 326 GILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFT-IVTMWAVVVTEGCRK 376
GI++ Y + + S L +S+ +GLL + + I+ + V + K
Sbjct: 187 GIISSIPSTIKSIYEDYFVNVRSGELTNSI----IFVGLLILASLIIVFFTTFVEQAEYK 242
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY KL A +S Y+P INP+G+ PV+ ++ + PS + PF
Sbjct: 243 IPIQYT--KLTQGAATNS-------YLPLKINPAGVIPVIFSSSITTIPSTII-----PF 288
Query: 437 WQHVKEILNPETSVGARPWVYYT------IYAFFVFLFNIF 471
+Q+ ++I T + W+ YT +YA + LF+ F
Sbjct: 289 FQNGRDIPWLTT---LQEWLSYTNPTGMVVYAVLIVLFSFF 326
>gi|120597009|ref|YP_961583.1| preprotein translocase subunit SecY [Shewanella sp. W3-18-1]
gi|146294821|ref|YP_001185245.1| preprotein translocase subunit SecY [Shewanella putrefaciens CN-32]
gi|386311975|ref|YP_006008140.1| preprotein translocase subunit SecY [Shewanella putrefaciens 200]
gi|120557102|gb|ABM23029.1| protein translocase subunit secY/sec61 alpha [Shewanella sp.
W3-18-1]
gi|145566511|gb|ABP77446.1| protein translocase subunit secY/sec61 alpha [Shewanella
putrefaciens CN-32]
gi|319424600|gb|ADV52674.1| preprotein translocase, SecY subunit [Shewanella putrefaciens 200]
Length = 446
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 15/296 (5%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
L +A F SE++ RL I++ R G F+P+PG D ++ + + SG++ + +
Sbjct: 8 LKSAKGGF--SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QSGTILSMFN 64
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y W +L
Sbjct: 65 MFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTL 124
Query: 261 GFAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++V +A LP + + V LV G M + W+ + I+E G G G
Sbjct: 125 VLGTFQSVGIAT-GLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNG 183
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
S++I GI+ G + + Q + +L + VF VT + V V G R++
Sbjct: 184 ISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFA-VTYFVVFVERGQRRIV 242
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ Y A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 243 VNY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|386812717|ref|ZP_10099942.1| protein translocase subunit SecY [planctomycete KSU-1]
gi|386404987|dbj|GAB62823.1| protein translocase subunit SecY [planctomycete KSU-1]
Length = 460
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 38/315 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
E+R+++ +T LI + R+G +IP+PG D ++ + F V +L GA
Sbjct: 13 ELRKKVLITLGLIALCRVGVYIPIPGIDTTVLKSYFHQFTQTGVGQLLGLVDMFAGGALT 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ F LG+ P I ASI+ Q+L ++P L +L+KEG G +KI Y ++G + +A
Sbjct: 73 SGAIFGLGVMPYISASIIFQLLVGVIPYLEKLQKEGEVGRKKINQYTRLATVGLCLFQAF 132
Query: 269 IV--ACYSLPYS----IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 322
++ Y++ ++ I + M+ A LL G MT+ WI + I E G G G S++
Sbjct: 133 VMTRTLYTVEFNGVPVIPVYLQGIGFQMMAALLLTTGTMTLMWIGEQIEEHGIGSGISIV 192
Query: 323 ICVGILTGYTETLYKMLSQLLGS---SVRWWPFMLG------LLGVFTIVTMWAVVVTEG 373
I VGI+ E L SQ++ + SV +G LLG+F + V +T+G
Sbjct: 193 IMVGII----ERLPWAFSQVIQNFTFSVTPAEHQIGIVKLLVLLGMFLAIVGGVVYITQG 248
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +Q A R ++P +N +G+ P++ LL FP A+I+
Sbjct: 249 QRRIPVQQ-----AKHTRGRKVYGGQRHFLPLRVNQAGVMPIIFAQSLLIFP---AAIM- 299
Query: 434 SPFWQHVKEILNPET 448
Q ++ L+P T
Sbjct: 300 ----QGIQARLDPGT 310
>gi|22536263|ref|NP_687114.1| preprotein translocase subunit SecY [Streptococcus agalactiae
2603V/R]
gi|25010153|ref|NP_734548.1| preprotein translocase subunit SecY [Streptococcus agalactiae
NEM316]
gi|76787809|ref|YP_328804.1| preprotein translocase subunit SecY [Streptococcus agalactiae A909]
gi|77406107|ref|ZP_00783181.1| preprotein translocase, SecY subunit [Streptococcus agalactiae
H36B]
gi|77412269|ref|ZP_00788585.1| preprotein translocase, SecY subunit [Streptococcus agalactiae
CJB111]
gi|77414573|ref|ZP_00790716.1| preprotein translocase, SecY subunit [Streptococcus agalactiae 515]
gi|339302539|ref|ZP_08651585.1| preprotein translocase subunit SecY [Streptococcus agalactiae ATCC
13813]
gi|406708600|ref|YP_006763326.1| preprotein translocase subunit SecY [Streptococcus agalactiae
GD201008-001]
gi|410593786|ref|YP_006950513.1| protein translocase subunit SecY [Streptococcus agalactiae SA20-06]
gi|417004098|ref|ZP_11942874.1| preprotein translocase subunit SecY [Streptococcus agalactiae FSL
S3-026]
gi|421147884|ref|ZP_15607557.1| preprotein translocase subunit SecY [Streptococcus agalactiae
GB00112]
gi|421532447|ref|ZP_15978809.1| preprotein translocase subunit SecY [Streptococcus agalactiae
STIR-CD-17]
gi|424050338|ref|ZP_17787884.1| preprotein translocase subunit SecY [Streptococcus agalactiae
ZQ0910]
gi|22533084|gb|AAM98986.1|AE014195_5 preprotein translocase, SecY subunit [Streptococcus agalactiae
2603V/R]
gi|23094504|emb|CAD45723.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562866|gb|ABA45450.1| preprotein translocase, SecY subunit [Streptococcus agalactiae
A909]
gi|77159371|gb|EAO70539.1| preprotein translocase, SecY subunit [Streptococcus agalactiae 515]
gi|77161659|gb|EAO72654.1| preprotein translocase, SecY subunit [Streptococcus agalactiae
CJB111]
gi|77175288|gb|EAO78083.1| preprotein translocase, SecY subunit [Streptococcus agalactiae
H36B]
gi|319743975|gb|EFV96355.1| preprotein translocase subunit SecY [Streptococcus agalactiae ATCC
13813]
gi|341578384|gb|EGS28780.1| preprotein translocase subunit SecY [Streptococcus agalactiae FSL
S3-026]
gi|389648112|gb|EIM69624.1| preprotein translocase subunit SecY [Streptococcus agalactiae
ZQ0910]
gi|401685505|gb|EJS81512.1| preprotein translocase subunit SecY [Streptococcus agalactiae
GB00112]
gi|403642362|gb|EJZ03215.1| preprotein translocase subunit SecY [Streptococcus agalactiae
STIR-CD-17]
gi|406649485|gb|AFS44886.1| preprotein translocase subunit SecY [Streptococcus agalactiae
GD201008-001]
gi|410517425|gb|AFV71569.1| Protein translocase subunit SecY [Streptococcus agalactiae SA20-06]
Length = 434
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 169/344 (49%), Gaps = 60/344 (17%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++ T ++++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRNKILFTIFILLVFRIGTHITVPGINVKSLEQMGELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLFLAFVQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + +V+ ++ +L G+M ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVKTPNVQTYLLIGAILTTGSMVVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGY---TETLYK-MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 376
GI++ T+Y+ + S++ +G+L IV + A+V + + K
Sbjct: 187 GIISSIPSAITTIYEDFFVNVRSSAITNSYIFVGIL----IVAVLAIVFFTTFIQQAEYK 242
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY KL A S Y+P +NP+G+ PV+ + + PS + PF
Sbjct: 243 IPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTII-----PF 288
Query: 437 WQHVKEI---------LNPETSVGARPWVYYTIYAFFVFLFNIF 471
+Q+ KEI LN +T VG IYA + LF+ F
Sbjct: 289 FQNGKEIPWLTKLQELLNYQTPVGM------IIYAILIILFSFF 326
>gi|261211131|ref|ZP_05925420.1| preprotein translocase SecY subunit [Vibrio sp. RC341]
gi|260839632|gb|EEX66243.1| preprotein translocase SecY subunit [Vibrio sp. RC341]
Length = 444
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RLF +++ R G F+P+PG D ++ D G++ E+ + GA +
Sbjct: 17 SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLA-DLFEQQKGTIIEMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SIFALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + ++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 136 AT-GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P IN +G+ P + + ++ FP LA G
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQ 294
>gi|226953891|ref|ZP_03824355.1| preprotein translocase subunit SecY [Acinetobacter sp. ATCC 27244]
gi|226835374|gb|EEH67757.1| preprotein translocase subunit SecY [Acinetobacter sp. ATCC 27244]
Length = 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 24/292 (8%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + F + LG F GA
Sbjct: 11 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDSVALAS---FFKANEGTFLGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G K+ Y + +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKLNQYTRYGTLFLALVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 127 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 184
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 185 GIVAG----LPNLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY- 239
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 240 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 287
>gi|422338811|ref|ZP_16419771.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355371938|gb|EHG19281.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 426
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGTG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGLSFFVRTVTTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
YIP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGQ-----NSYIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|284033982|ref|YP_003383913.1| preprotein translocase subunit SecY [Kribbella flavida DSM 17836]
gi|283813275|gb|ADB35114.1| preprotein translocase, SecY subunit [Kribbella flavida DSM 17836]
Length = 433
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 31/344 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++RR++ ++VI RIG +P PG + + + +G+ L
Sbjct: 1 MLGAFANAFKTPDLRRKILFVLFIVVIFRIGSVVPAPGVNVQSLDVCLRQSQTGANANLY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
+ GA L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 NLINLFSGGALLQLAIFALGIMPYITASIILQLLTVVIPRLESLKKEGQAGQGKITQYTR 120
Query: 257 WISLGFAILEA-VIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICD 308
++++G AIL+A VA P ++ S V V+V + G + W+ +
Sbjct: 121 FLTVGLAILQATAFVALARTPGRLFQGCDLPLLHSDKVFPVVVMVLTMTAGTGVVMWLGE 180
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S++I I+ + L+ + R L ++ + ++ +
Sbjct: 181 LITDRGVGNGMSILIFTQIVATFPTQLWAIRKD------RGVGTFLVVIAIGLVIVAAVI 234
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ + R++ +QY A YIP +N +G+ PV+ + L+ P ++
Sbjct: 235 FIEQAQRRIPVQY-----AKRMVGRKMFGGTSTYIPLKVNQAGVIPVIFASSLMYLPVLV 289
Query: 429 ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ W Q ++ L V W+Y Y + F F
Sbjct: 290 SQFRQEEKWAQWIQANL-----VRGDHWIYMVTYVALIIFFTYF 328
>gi|294651614|ref|ZP_06728918.1| preprotein translocase subunit SecY [Acinetobacter haemolyticus
ATCC 19194]
gi|292822463|gb|EFF81362.1| preprotein translocase subunit SecY [Acinetobacter haemolyticus
ATCC 19194]
Length = 452
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 24/292 (8%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IPLPG D + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDSVALAS---FFKANEGTFLGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G K+ Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKLNQYTRYGTLFLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAG----LPNLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY- 251
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
>gi|89070533|ref|ZP_01157822.1| preprotein translocase SecY [Oceanicola granulosus HTCC2516]
gi|89043840|gb|EAR50038.1| preprotein translocase SecY [Oceanicola granulosus HTCC2516]
Length = 449
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 15/286 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDR---RLIPQDYLSFVSGSVDELGDFGAELKL 210
+E+R+R+ T L+++ R+G +IP+PG D R +D + + G + GA ++
Sbjct: 14 TELRQRILFTLGLLIVYRLGTYIPVPGIDGGALRTFMEDAAAGLGGILSMFTG-GALSRM 72
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q++ + QL+KEG G +K+ Y + ++ A +A +
Sbjct: 73 GIFALGIMPYISASIIVQLMGSMYEPWKQLKKEGEQGRKKLNQYTRYGTVLLATFQAYGL 132
Query: 271 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
A SL A+ + T LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 133 AV-SLEAGDLASDPGLFFRASTVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAE 191
Query: 331 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
L + LSQ G + P ++G+L + IVT+ VV E RK+ +QY ++
Sbjct: 192 IPAALAQFLSQ--GRAGAISPAVIIGVL-LMVIVTLTFVVFMERALRKIHIQYPRRQVGM 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +NP+G+ P + + LL P+ +++ G
Sbjct: 249 KVYDGG-----SSHLPIKVNPAGVIPAIFASALLLLPTTISTFSGG 289
>gi|406983714|gb|EKE04874.1| hypothetical protein ACD_19C00429G0034 [uncultured bacterium]
Length = 426
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 40/339 (11%)
Query: 150 SFFKS-----EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELG 202
FFK +R+++ +TA +++ RI IP G DR D LS F + + L
Sbjct: 7 QFFKKIAESPRLRKKILITAGALLVFRIAAHIPAAGIDR-----DSLSALFNASPLLSLL 61
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D G S LG++P I ASI++Q+L ++VPSL +L+KEG G EKI Y ++
Sbjct: 62 DVFSGGTLANFSIMALGLNPYINASIILQILGYVVPSLEELQKEGEYGQEKINQYTRLLT 121
Query: 260 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-----GAMTMSWICDTISESG 314
+ AI+++ + Y++ + + + ++ + + +C G M W+ D I+E
Sbjct: 122 VPLAIMQSFGM------YALLKSQNIIGNLDMMQLIFLCLTMTGGTMLAVWLGDLITEYA 175
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGS-SVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
F G S +I VGI++ L + +S S+++ F+ L V + + V E
Sbjct: 176 FKSGISFLIFVGIISRLPIVLGQTISTFRSEDSLKYIIFVAVALAVMATI----IFVNEA 231
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ + Y A+ + + + Y+P +N +G+ P++ L+ PS++ LG
Sbjct: 232 IRQIPISY--------AKATKGLKQAQSYLPLRLNQAGVIPIIFAVSLVLMPSMITQFLG 283
Query: 434 SPFWQHVKEI-LNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V+ I N + + VY IY V F F
Sbjct: 284 ASGNTTVQMIATNIQKYFNPQSVVYNVIYFLLVVGFTYF 322
>gi|298370571|ref|ZP_06981886.1| preprotein translocase, SecY subunit [Neisseria sp. oral taxon 014
str. F0314]
gi|298281181|gb|EFI22671.1| preprotein translocase, SecY subunit [Neisseria sp. oral taxon 014
str. F0314]
Length = 438
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 154/296 (52%), Gaps = 16/296 (5%)
Query: 145 NNAAESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
+++ FKS ++++RL +++ RIG IP+PG D + + Y S SG + L
Sbjct: 5 QSSSSGLFKSIDLKKRLLFLLGALIVFRIGAHIPVPGVDAVALAKLYESAGSGILGMLNM 64
Query: 204 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
F G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 FSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKSLKKEGEAGRKVITKYTRYGTVL 124
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
AIL+++ VA + + A+ S++ + T LV G M + W+ + I+E G G G SL
Sbjct: 125 LAILQSLGVATFVFQQGVVVAA-SLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISL 183
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQ 380
II GI G + ++++ S+ + + + G ++ + VV E RK+ +
Sbjct: 184 IITAGIAAGIPAAIVQLVTLTNQGSMSIFTAISIIFGALLLI--YIVVYFESAQRKIPIH 241
Query: 381 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
Y A R+ ++ I ++PF +N +G+ P + + ++ FPS L S GS
Sbjct: 242 Y-------AKRQFGNNVIQGQNTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGS 290
>gi|326799148|ref|YP_004316967.1| preprotein translocase subunit SecY [Sphingobacterium sp. 21]
gi|326549912|gb|ADZ78297.1| preprotein translocase, SecY subunit [Sphingobacterium sp. 21]
Length = 443
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 141/279 (50%), Gaps = 14/279 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
++R R+ T + ++I R+G I LPG + + + Q+ + G ++ G+ + + F
Sbjct: 16 DLRTRILNTLLFLLIYRVGSHIVLPGVNPQSLSQEAKDGILGLLNMFAG-GSFSRSAIFA 74
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG+ P I ASI++Q+L VP +L+KEG G +K+ +++L +++AV Y
Sbjct: 75 LGVMPYISASIVVQLLGIAVPYFQKLQKEGESGRKKMTQITRYLTLAITLVQAV---AY- 130
Query: 275 LPYSIYAASHSVKH---VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L I + ++ +V F+L G M + W+ + I++ G G G SLII VGI+
Sbjct: 131 LRSQISPEAKTMDEPFFTLVGTFILTAGTMFVMWLGEKITDKGIGNGISLIIMVGIIAQL 190
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ + + PF++ + +F +V ++ +++ +G RK+ +QY A
Sbjct: 191 PSGMLSEWASRMDGHGGLIPFIVEIAALFFVV-VFTILIVQGVRKIPVQY-----AKKIV 244
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ V YIP +N +G+ P++ ++ P+ LA
Sbjct: 245 GNKQYGGVRQYIPLKVNSAGVMPIIFAQAIMFIPTTLAQ 283
>gi|319942193|ref|ZP_08016509.1| preprotein translocase subunit secY [Sutterella wadsworthensis
3_1_45B]
gi|319804246|gb|EFW01138.1| preprotein translocase subunit secY [Sutterella wadsworthensis
3_1_45B]
Length = 441
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 18/284 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++ RL A+ +V+ RIG +P+PG D ++ Q + G + F GA + S
Sbjct: 17 GDLKGRLIFLALALVVYRIGAHVPVPGIDPDMLNQLFNQQQGGILGLFNMFSGGALSRFS 76
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE--AVI 269
F LGI P I ASI+ Q+L +++PSL +RKEG G KI Y + +L + + +
Sbjct: 77 VFALGIMPYISASIIFQMLSYVLPSLEAIRKEGEQGRRKITQYTRYGTLALGLFQGFGIA 136
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
VA + P + + + T L+ G M + W+ + I+E G G G S+II GI+
Sbjct: 137 VALETQPGLVIDPGFLFR--ITTTVSLLTGTMFLMWLGEQITERGLGNGISIIIFAGIVA 194
Query: 330 GY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
G L++++S S + ++ +LG VT + V V G R++ + Y ++
Sbjct: 195 GLPNGASGLFQLVSTGAISPLAAIFVIVIVLG----VTAFCVFVERGQRRITVNYAKRQV 250
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ Y+P +N SG+ P + + L+ FP+ LA
Sbjct: 251 GNRIYGGQ-----SSYLPLKMNMSGVIPPIFASSLILFPATLAG 289
>gi|409097745|ref|ZP_11217769.1| preprotein translocase subunit SecY [Pedobacter agri PB92]
Length = 446
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 142/277 (51%), Gaps = 11/277 (3%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
E++ R+ T +++++ R + LPG D + + S + G +D G+ ++S
Sbjct: 16 ELKERILFTLLILLVYRFVSHVVLPGVDPTALGTNEKSGLLGILDMFAG-GSFSRVSILA 74
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG+ P I ASI++Q+L VPS +++KEG G +K+ ++++ I+++V
Sbjct: 75 LGVMPYISASIVVQLLGIAVPSFQKMQKEGESGRKKMNQITRYLTVAITIVQSVGYVKTQ 134
Query: 275 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 334
+P +++ V+ T F+L G + + W+ + I++ G G G+SLII VGI+
Sbjct: 135 VPAEAILLPNTLFLVLST-FVLTAGTLFVMWLGEKITDKGIGNGTSLIIMVGIIARLPIA 193
Query: 335 LYKMLSQLLGSSVRWW---PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
+ + S +GS+ +L ++ +F +V M+ +++ +G RKV +QY A
Sbjct: 194 ISQEFSARVGSASEGGGPVALVLEIVALFAVV-MFTILIVQGVRKVPVQY-----AKKIV 247
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ V YIP +N +G+ P++ L+ P L
Sbjct: 248 GNRQFGGVRQYIPLKVNAAGVMPIIFAQALMFIPGAL 284
>gi|94676471|ref|YP_588796.1| preprotein translocase, SecY subunit [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94219621|gb|ABF13780.1| preprotein translocase, SecY subunit [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 444
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 35/344 (10%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
+N+ + +E+R R+F +V+ RIG FIP+PG + ++ Q L G++ E+ +
Sbjct: 7 VNSKNTKIWFAELRCRIFFLLGALVVFRIGTFIPIPGINTTILSQ-LLEEQKGTIIEIFN 65
Query: 204 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F LGI P I ASI++ +L I P+L L+KEG G KI+ Y +++L
Sbjct: 66 MFSGGALNRASIFALGIMPYISASIILHLLTVIHPTLADLKKEGKSGRRKIRQYTCYVTL 125
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---------LVCGAMTMSWICDTIS 311
IL+++ +A + + + +++ L L+CG M + W+ + I+
Sbjct: 126 LLGILQSIGIA------NSFTTMSGIHQIIIDPGLLFYSTAVISLLCGTMFLMWLGNQIT 179
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G S+II GI+ G + K + +L + +L + + IVT V V
Sbjct: 180 ERGLGNGISVIIFTGIIAGLPSAISKTI-ELTRQGDLPFIILLLIGIIVFIVTFVVVFVE 238
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
G R++ + Y A + ++P +N +G+ P + ++ FP+ LAS
Sbjct: 239 RGQRRIIINY-----AQRQQGRRIYAAQHTHLPIKVNIAGVLPAIFAASIILFPATLASW 293
Query: 432 L-GSPFWQHVKEI---LNPETSVGARPWVYYTIYAFFVFLFNIF 471
G+ W+ + I L P +Y +YA + F F
Sbjct: 294 FGGTTRWRWLNSIYLYLQPNQP------IYVLLYAIAIMFFCFF 331
>gi|334143241|ref|YP_004536397.1| preprotein translocase subunit SecY [Thioalkalimicrobium cyclicum
ALM1]
gi|333964152|gb|AEG30918.1| preprotein translocase, SecY subunit [Thioalkalimicrobium cyclicum
ALM1]
Length = 442
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV R+G IP+P D + + +D F GA +LS L
Sbjct: 22 RLLFVLGALIVF-RLGTHIPVPSIDPIALAAMFEQQRGTILDMFNMFSGGALERLSILAL 80
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I A+I+MQ+L + P+L QL+KEG G KI Y + ++ A +A+ V+
Sbjct: 81 GIMPYISAAIIMQLLTAVSPTLEQLKKEGEAGRRKITQYTRYGTVVLATFQAIGVSIALQ 140
Query: 276 PYSIYAASHSVKH---VMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+I V MVTA + LV G + + W+ + I+E G G G SLII GI+ G
Sbjct: 141 AQNINGMPVVVNPGPLFMVTAVITLVSGTIFLMWLGEQITERGIGNGISLIIFAGIVAGL 200
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 391
L L Q+ ++ ++ LL + VT + V V G R++ +QY A R
Sbjct: 201 PSALGGTLEQVHTGALHAITVII-LLLLVAGVTAFVVFVERGQRRIPVQY-----AQRMR 254
Query: 392 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 451
E ++P +N +G+ P + + ++ FP+ L GS ++ + + T++
Sbjct: 255 GRKLYGGQEGHLPLKLNMAGVIPPIFASSIILFPASLGGWFGSS--DNMSWLKDIATTLA 312
Query: 452 ARPWVYYTIYAFFVFLFNIF 471
+Y +YA + F F
Sbjct: 313 PGQPLYVILYALAIMFFCFF 332
>gi|319952176|ref|YP_004163443.1| protein translocase subunit secy/sec61 alpha [Cellulophaga algicola
DSM 14237]
gi|319420836|gb|ADV47945.1| protein translocase subunit secY/sec61 alpha [Cellulophaga algicola
DSM 14237]
Length = 446
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E++ R+ VT L+++ R G I LPG D + +G L F GA K S
Sbjct: 15 EELKGRILVTLGLLLVYRFGAQIALPGIDTTQLGALTSGTENGIFGILNAFTGGAFAKAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---- 267
F LGI P I ASI++Q++ +P L +L+KEG G + I W+++G IL+A
Sbjct: 75 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIGICILQAPTYL 134
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ ++ + +P S + + ++ +LV G + W+ + I++ G G G SL+I VGI
Sbjct: 135 LGLSQFGVPDSAFVLGKGLDFMIPAVIILVTGTVFAMWLGEKITDRGIGNGISLLIMVGI 194
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW------AVVVTEGCRKVKLQY 381
+ TL + +Q ++ W G + V V +W +V++ R++ +QY
Sbjct: 195 IA----TLPQAFAQ---EAISRWEGTGGPMLVLIEVIIWFVVILLSVLLVMATRQIPVQY 247
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
+ +D+ T YIP +N SG+ P++ ++ P ++ + W
Sbjct: 248 ARRSASGGYEKDAMGT--RQYIPLKLNASGVMPIIFAQAIMFAPGLIGKTFNNTVWGAWM 305
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIF 471
E+ + A Y ++AF + +F F
Sbjct: 306 EVQFQDIFGLA----YNLLFAFLIIVFTYF 331
>gi|146308903|ref|YP_001189368.1| preprotein translocase subunit SecY [Pseudomonas mendocina ymp]
gi|421503842|ref|ZP_15950787.1| preprotein translocase subunit SecY [Pseudomonas mendocina DLHK]
gi|145577104|gb|ABP86636.1| protein translocase subunit secY/sec61 alpha [Pseudomonas mendocina
ymp]
gi|400345346|gb|EJO93711.1| preprotein translocase subunit SecY [Pseudomonas mendocina DLHK]
Length = 442
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFMAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 267
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L A ++A
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAFVQAIG 133
Query: 268 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V +A + +S+ H V +T F V GAM M W+ + I+E G G G S++I
Sbjct: 134 MSVGLASQGVAFSVDFGFH---FVAITTF--VAGAMFMMWLGEQITERGVGNGISMLIFA 188
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ G + + + + + +GLL V I + V + G R++ + Y
Sbjct: 189 GIVAGLPSAIGQSFESARQGDINIFALIAIGLLAVAII--GFVVFIERGQRRIAVHY--- 243
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + LL FP+ L + G
Sbjct: 244 --AKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSLLLFPASLGAWFGQ 291
>gi|85706699|ref|ZP_01037791.1| preprotein translocase SecY [Roseovarius sp. 217]
gi|85668757|gb|EAQ23626.1| preprotein translocase SecY [Roseovarius sp. 217]
Length = 447
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 37/336 (11%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+E+R+R+ T L+++ R+G FIP+PG D + + F+ G+ +G GA
Sbjct: 14 TELRKRILFTLGLLIVYRLGTFIPVPGIDGIALRE----FMEGAQASIGGMLSMFTGGAL 69
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L++
Sbjct: 70 GRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRYGTVVLATLQS 129
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+A SL + + ++ LV G M + W+ + I+ G G G SLII VGI
Sbjct: 130 YGLAV-SLQSGEMVTNPGMFFIVSCMITLVGGTMFLMWLGEQITARGVGNGISLIIFVGI 188
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY----Y 382
+ L + + G S P ++ + V + + VV E RK+ +QY
Sbjct: 189 IAEVPAALAQFFAS--GRSGAVSPAVIVGVMVMVVAVIAFVVFMERSLRKIHIQYPRRQV 246
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQH 439
G K+ ++P +NP+G+ P + + LL P+ + + GS P
Sbjct: 247 GMKIYDGGSS---------HLPVKVNPAGVIPAIFASSLLLLPATITTFSGSTTNPVLST 297
Query: 440 VKEILNPETSVGARP--WVYYTIYAFFVFLFNIFDI 473
V P +P +++TI F F F++
Sbjct: 298 VMAYFGP-----GQPLYLLFFTIMIVFFAYFYTFNV 328
>gi|383753535|ref|YP_005432438.1| putative preprotein translocase SecY subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365587|dbj|BAL82415.1| putative preprotein translocase SecY subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 17/295 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ I R+G IP+PG D I Q F +G++ L D GA K S
Sbjct: 13 ELRQKITFTLIMFAIFRMGTHIPVPGVDPTAIEQ---LFANGNLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I A+I++Q+L ++P+L Q KEG +GH+K ++++ A L+A+
Sbjct: 70 IFAMSITPYINAAIIIQLLNVVIPTLEQWSKEGQEGHKKTTQVTRYLTVVLAFLQAI--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + S ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKAAILNPSPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ + + + ++ ++ FM L+ + +V + V V G R++ + Y A
Sbjct: 187 PKNIGTIYHYVQAGTISYFSVFMFALIAIAMVV--FVVHVENGFRRIPISYTKRVGARGT 244
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
+IP +N +G+ P++ + +L FP +A + P+ + V L
Sbjct: 245 YGGH-----SSHIPLKVNQAGVIPIIFASSVLMFPVTIAQFIEIPWVKTVASYLE 294
>gi|340753402|ref|ZP_08690188.1| preprotein translocase, SecY subunit [Fusobacterium sp. 2_1_31]
gi|229422994|gb|EEO38041.1| preprotein translocase, SecY subunit [Fusobacterium sp. 2_1_31]
Length = 426
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 209
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + ++ G F+ L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|401564481|ref|ZP_10805373.1| preprotein translocase, SecY subunit [Selenomonas sp. FOBRC6]
gi|400188808|gb|EJO22945.1| preprotein translocase, SecY subunit [Selenomonas sp. FOBRC6]
Length = 419
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 146/289 (50%), Gaps = 24/289 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F G++ L D GA K S
Sbjct: 13 ELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFAQGTLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I A+I++Q+L +VP+L Q KEG +GH+K ++++ A +A+
Sbjct: 70 IFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLTVALAFFQAI--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + S ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKSAILNPSPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 386
+ + + + + ++ ++ F ++ + IV + + + G R+V + Y G ++
Sbjct: 187 PKNIGTIYAYVKAGTISYFSVFAFAVIALAMIV--FVIHIETGFRRVPITYAKRLVGGRV 244
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
S+ +IPF +N +G+ P++ + +L FP +A + P
Sbjct: 245 GSSGHSS--------HIPFKVNQAGVIPIIFASSVLMFPITVAQFIDVP 285
>gi|359425132|ref|ZP_09216233.1| preprotein translocase SecY subunit [Gordonia amarae NBRC 15530]
gi|358239496|dbj|GAB05815.1| preprotein translocase SecY subunit [Gordonia amarae NBRC 15530]
Length = 439
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 159/341 (46%), Gaps = 36/341 (10%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-----SVDELGDF 204
+F ++R+++ +I++ R+G IP PG + +++ SG ++ +
Sbjct: 8 AFRTPDLRKKILFVIGIIILYRLGATIPSPGVNYKVVNDCMDQINSGDNQVYALINMFSG 67
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+L+ F +GI P I ASI++Q+L ++P QLRKEG G K+ Y ++++ A+
Sbjct: 68 GALLQLAVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLTVALAL 127
Query: 265 LEAV-IVACYS----LPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
L++ IVA S LP S + SV + + ++ GA + W+ + I+E G G
Sbjct: 128 LQSTGIVALASRGQLLPDSCTGDVLSDESVFALTIVVLVMTAGACVVMWMGELITERGVG 187
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 375
G SL+I GI +L Q G L+ V +V + VV V +G R
Sbjct: 188 NGMSLLIFAGIAARIPAEGKAILDQRGG-------LAFALVCVAALVIIAGVVFVEQGQR 240
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-- 433
++ +QY + S Y+P +N +G+ PV+ + LL P+++ +
Sbjct: 241 RIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLVLQLTSGS 295
Query: 434 --SPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ W+ V + L TS W + IY + F F
Sbjct: 296 DDTAGWKKFVNDYLTDPTS-----WSHILIYFAMIIFFTYF 331
>gi|258646032|ref|ZP_05733501.1| preprotein translocase, SecY subunit [Dialister invisus DSM 15470]
gi|260403403|gb|EEW96950.1| preprotein translocase, SecY subunit [Dialister invisus DSM 15470]
Length = 420
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 152/323 (47%), Gaps = 21/323 (6%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELK 209
E++ R+ T V+ + R+G IP+PG D ++ F SG++ D GA K
Sbjct: 11 NKELKDRVLFTMVMFFVFRLGVHIPVPGVDTSILES---LFSSGNLFGFLDLFSGGALSK 67
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
S F + I+P I +SI+MQ+L ++P+L + RK+G +G++KI+ + ++ A+++A
Sbjct: 68 FSLFAMSITPYINSSIIMQLLTSVIPTLEEWRKDGQEGYKKIQKVTRYFTIFLAVVQA-F 126
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
Y+L + +S + +L G + WI + I+E G G G SLII GI+
Sbjct: 127 GMTYALRINHALVDNSWLYFGFIIVVLTAGTCLLMWIGEQITEHGIGNGISLIIFCGIVA 186
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLAS 388
+ E + ++ L ++ PF L L + + + V+ V EG R+V +QY A
Sbjct: 187 RFPEAISTVIEYLKIGTIS--PFQLLLFVIIALGMILMVIEVNEGQRRVSIQY-----AK 239
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
++P +N +G+ P++ + ++ P LA + H+ + +
Sbjct: 240 RVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSIIMLPVTLAQFV------HIGWVQSVGN 293
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
W Y +F+F F
Sbjct: 294 FFAWGSWPNTICYGILIFIFTYF 316
>gi|330505187|ref|YP_004382056.1| preprotein translocase subunit SecY [Pseudomonas mendocina NK-01]
gi|328919473|gb|AEB60304.1| preprotein translocase subunit SecY [Pseudomonas mendocina NK-01]
Length = 442
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 267
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L A ++A
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAFVQAIG 133
Query: 268 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
V +A + +S+ H V +T F V GAM M W+ + I+E G G G S++I
Sbjct: 134 MSVGLASQGVAFSVDFGFH---FVAITTF--VAGAMFMMWLGEQITERGVGNGISMLIFA 188
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
GI+ G + + + + + +GLL V I + V + G R++ + Y
Sbjct: 189 GIVAGLPSAIGQSFESARQGDINIFALIAIGLLAVAII--GFVVFIERGQRRIAVHY--- 243
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + LL FP+ L + G
Sbjct: 244 --AKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSLLLFPASLGTWFGQ 291
>gi|255319795|ref|ZP_05361000.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SK82]
gi|262380328|ref|ZP_06073482.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SH164]
gi|421466428|ref|ZP_15915107.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
WC-A-157]
gi|421855340|ref|ZP_16287720.1| preprotein translocase subunit SecY [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255303114|gb|EET82326.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SK82]
gi|262297774|gb|EEY85689.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SH164]
gi|400203208|gb|EJO34201.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
WC-A-157]
gi|403189351|dbj|GAB73921.1| preprotein translocase subunit SecY [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 452
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 149/292 (51%), Gaps = 24/292 (8%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IP+PG + + ++ + G++ LG F GA
Sbjct: 23 YREIIRRMMFLIGALLVF-RLGAHIPVPGINNAAL-ENLFNANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
A + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 ATGMCAGLIGQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI+ G L ++ Q L S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAG----LPNLIMQSLSSVDSGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRISVNY- 251
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|254303400|ref|ZP_04970758.1| protein translocase SecY [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323592|gb|EDK88842.1| protein translocase SecY [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 426
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGTG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGLSFFVRTVTTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
YIP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGQ-----NSYIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|429212593|ref|ZP_19203758.1| preprotein translocase subunit SecY [Pseudomonas sp. M1]
gi|428157075|gb|EKX03623.1| preprotein translocase subunit SecY [Pseudomonas sp. M1]
Length = 444
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 19/302 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 17 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAALFRQNEGTILS--LFNMFSGGALER 74
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + +L A+++A+
Sbjct: 75 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGESGRRKISQYTRYATLVLALVQAIG 134
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+A L A S+ V V GA+ M W+ + I+E G G G S++I GI+
Sbjct: 135 MAV-GLGSQGVAFSNDFGFYFVAVTTFVAGALFMMWLGEQITERGVGNGISMLIFSGIVA 193
Query: 330 GYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 194 GLPRAIGQSFESARQGDINIFALIAVGLLAVAIIA--FVVFIERGQRRIAVHY-----AK 246
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEIL 444
+ ++P +N +G+ P + + +L FP+ L + G + Q V + +
Sbjct: 247 RQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGLGWLQDVAQAI 306
Query: 445 NP 446
P
Sbjct: 307 AP 308
>gi|84685398|ref|ZP_01013296.1| preprotein translocase SecY [Maritimibacter alkaliphilus HTCC2654]
gi|84666555|gb|EAQ13027.1| preprotein translocase SecY [Rhodobacterales bacterium HTCC2654]
Length = 451
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 35/278 (12%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 210
+++R+R+F T L++I RIG +IP+PG D + +D++ + G + + GA ++
Sbjct: 14 TDLRKRIFYTIGLLIIYRIGTYIPVPGIDAGAL-RDFMEQAAAGIGGILSMFTGGALGRM 72
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F LGI P I ASI++Q+L + L QL+KEG G +KI Y + ++ A +A +
Sbjct: 73 GVFALGIMPYISASIIVQLLASMWEPLKQLKKEGEQGRKKINQYTRYGTVALATGQAFAL 132
Query: 271 A-------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
A S P + AS V LV G M + W+ + I+ G G G SLII
Sbjct: 133 ANSLQAGDLVSTPGPFFIASAVVT--------LVGGTMFLMWLGEQITARGIGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY- 381
VGI+ + LSQ G S P ++G+L + V + V + RK+ +QY
Sbjct: 185 FVGIVAELPAAAAQFLSQ--GRSGAISPAVIIGVLVMVMAVIAFVVFMERALRKIHIQYP 242
Query: 382 ---YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL 416
G K+ ++P +NP+G+ P +
Sbjct: 243 RRQVGMKMYDGGSS---------HLPIKVNPAGVIPAI 271
>gi|328543378|ref|YP_004303487.1| Preprotein translocase, SecY subunit [Polymorphum gilvum
SL003B-26A1]
gi|326413123|gb|ADZ70186.1| Preprotein translocase, SecY subunit [Polymorphum gilvum
SL003B-26A1]
Length = 443
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 23/301 (7%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L++ LN +A F K+E +++R++ T +++ R+G +IPLPG + Q + SG
Sbjct: 7 QLAANLNFSA--FAKAEELKKRIWFTLGALLVYRLGTYIPLPGINPEAFAQAFGQAQSGI 64
Query: 198 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+ F GA +++ F LGI P I ASI+MQ++ +VPSL QL+KEG G + I Y
Sbjct: 65 IGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTSVVPSLEQLKKEGDQGRKTINQYT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKH----VMVTAFL-LVCGAMTMSWICDTI 310
+ ++ A ++A Y + + A++ V ++A + LV G M + W+ + I
Sbjct: 125 RYGTVLLATMQA-----YGIAVGLEGATNVVADPGWFFRISAVITLVGGTMFLMWLGEQI 179
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
+ G G G SLII GI+ G + L G+ W M+ +L V I + V
Sbjct: 180 TSRGIGNGISLIIFAGIVAGLPAAIVSTLELGRQGALATWIILMVIVLAVAVIGLI--VF 237
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
+ R++ +QY ++ + E + ++P +N +G+ P + + LL P+ ++
Sbjct: 238 MERAQRRLLIQYPKRQVGNKMFEGN-----TSFLPLKLNTAGVIPPIFASSLLLVPATIS 292
Query: 430 S 430
Sbjct: 293 G 293
>gi|294142913|ref|YP_003558891.1| preprotein translocase subunit SecY [Shewanella violacea DSS12]
gi|293329382|dbj|BAJ04113.1| preprotein translocase, SecY subunit [Shewanella violacea DSS12]
Length = 446
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + + G++ LG F GA
Sbjct: 16 SELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELF-NQQKGTI--LGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y + +L +A+
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGETGRKKISQYTRYGTLVLGTFQAI 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP I + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLIPGLVVNLGFSFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + +L + VF VT V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLIAVIVFA-VTFLVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP LA G
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|356517020|ref|XP_003527188.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Glycine max]
Length = 540
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 201
FFK + + + +SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 124 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 183
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
G LGI P I A I+ Q+L + P L L+K EG G +K+ Y + S+
Sbjct: 184 G---------VCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASV 234
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
GFAI++A+ + PY S + V+ + LL G++ +I + I++ G G+S
Sbjct: 235 GFAIVQAIGQVLFLRPY---VNDFSTEWVISSVILLTLGSVFTMYIGERITDLKLGNGTS 291
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV------TMWAVVVTEGC 374
L+I I++ + + ++Q + +G+ TIV + V V E
Sbjct: 292 LLIFTNIISYLPASFGRTIAQAFNDA--------NYIGLGTIVLSFFLLVVGIVYVQEAE 343
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ L Y AS S E Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 344 RKIPLNY-----ASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGL 398
Query: 435 PFWQHVKEILNPETS 449
+ LNP S
Sbjct: 399 TALKKAAVALNPGGS 413
>gi|315605919|ref|ZP_07880950.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312201|gb|EFU60287.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 180
str. F0310]
Length = 430
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 21/298 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G ++ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQARLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
+G +L+A + ++ + S+ ++ +++ G + W+ + I+E
Sbjct: 121 IGLGVLQATTTVSLARSGQLFQSCSEGVIKDRSIVTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SL+I I E L +G S +W ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQSGKWASVAA-IVALLLVVALAVVYVEQ 234
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P ++A
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPPMVAQ 287
>gi|297836616|ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
lyrata]
gi|297332030|gb|EFH62449.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
lyrata]
Length = 549
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 148/308 (48%), Gaps = 27/308 (8%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDF 204
FFK + + + +SR+G +IPL G +R +FV G++D+ L F
Sbjct: 131 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRE-------AFV-GNLDQNSILSTLDTF 182
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+G
Sbjct: 183 SGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASVG 242
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI++A+ Y PY S + + + LL G++ ++I + IS+ G G+SL
Sbjct: 243 FAIVQAIGQVFYLRPY---VNDFSTEWAISSVTLLSLGSVLTTYIGERISDLKLGNGTSL 299
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I I++ + + ++ L + + ++ F ++ + V V E RK+ L Y
Sbjct: 300 LIFTSIISYLPASFGRTAAEALQEG--NYTGLATIVVSFLLLVLGIVYVQEAERKIPLNY 357
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
AS + + Y+PF +N +G+ P++ +T LA P+ LA G ++V
Sbjct: 358 -----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVA 412
Query: 442 EILNPETS 449
LNP S
Sbjct: 413 FALNPGGS 420
>gi|455651242|gb|EMF29988.1| preprotein translocase subunit SecY [Streptomyces gancidicus BKS
13-15]
Length = 437
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 27/344 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D R + Q + + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYRNV-QTCIDAAQANQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICD 308
+++ AIL+ + + +++ AS V + + VT +++ G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFQGCPVASQIVPDQSIFVTITMVITMTAGTAVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKEQ--GSLADGWIEFGTVIAVGLVMVGLVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 429 ASI-LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
A G+ W K + G P +Y T+Y + F F
Sbjct: 293 AQFSSGTSGW---KTWIEAHLVRGDHP-IYVTLYFLLIVFFAFF 332
>gi|436842964|ref|YP_007327342.1| preprotein translocase subunit [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171870|emb|CCO25243.1| preprotein translocase subunit [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 436
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 19/328 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+++++F T +L+ + RIG IP+PG D + D+ VS ++ L D G LS
Sbjct: 14 ELKKKIFWTFLLLAVYRIGIHIPVPGVDSAAL-ADFFESVSNTLFGLFDMFSGGGLRNLS 72
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI++Q+L + P L +L +EG G +KI Y + ++ I++ +A
Sbjct: 73 IFALGIMPYISASIIIQLLNVVSPELKRLSQEGAQGRKKITQYTRYATVAITIVQGFGIA 132
Query: 272 CYSLPYSIYAASHSVKHV-----MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ + V H ++T L G + + W+ + ++E G G G S+II G
Sbjct: 133 MGLESMTSPTGAPVVLHAGWTFRLITILTLTAGTVFLMWLGEQMTEKGIGNGISMIIFAG 192
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G ++ + + + + + L + I+ + V + G R++ + Y
Sbjct: 193 IVAGLPSAIFNTVRLMQAGEITLFLLLFVLAFMIAILA-FIVFMERGQRRIPIHY----- 246
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
A + ++P IN +G+ P + + +L FP+ LAS + V NP
Sbjct: 247 AKRMMGRKMMGGQTTHLPLRINTAGVIPPIFASSILMFPATLASFSDNEILSKVSAYFNP 306
Query: 447 ETSVGARPWVYYTIYAFFVFLFN--IFD 472
+ + ++ + FF + + IFD
Sbjct: 307 DAVI--YNVIFIALIIFFCYFYTAIIFD 332
>gi|33866617|ref|NP_898176.1| preprotein translocase subunit SecY [Synechococcus sp. WH 8102]
gi|33633395|emb|CAE08600.1| preprotein translocase SecY subunit [Synechococcus sp. WH 8102]
Length = 441
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 18/303 (5%)
Query: 173 GYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELKLSFFQLGISPQIVASILM 227
G +IP+PG DR + + SF+ LG G L F LGI P I ASI++
Sbjct: 41 GIYIPIPGIDR----EAFASFIEQGGSLLGFLDIFTGGGISTLGVFALGILPFINASIIL 96
Query: 228 QVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSV 286
Q+L +P L L+K EG G KI +++LG+ ++++V+ A Y++ S V
Sbjct: 97 QLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYALEGISEVV 156
Query: 287 KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSS 346
V+ TA LV G+M + W+ + I+E G GQG+SL+I + I+ TL +
Sbjct: 157 -FVVQTALCLVTGSMVVMWLSEVITERGIGQGASLVIFLNIVGTLPRTLGATIEAAQTGD 215
Query: 347 VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFN 406
++ L+ VF + + + V EG R++ + ++ A P + Y+P
Sbjct: 216 RNTVLGIVVLVLVFLVTIVGIIFVQEGARRIPIVSAKRQVGGAGVGVLPTR--QSYLPLK 273
Query: 407 INPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVF 466
+N G+ P++ + ++ P +A+ + + +LNP A PW Y AFF
Sbjct: 274 LNAGGVMPIIFASAVIFLPVTIANFTNNEWLIRGASLLNPGA---ANPWPYA--LAFFAL 328
Query: 467 LFN 469
+
Sbjct: 329 ILG 331
>gi|359298568|ref|ZP_09184407.1| preprotein translocase subunit SecY [Haemophilus [parainfluenzae]
CCUG 13788]
gi|402305939|ref|ZP_10824993.1| preprotein translocase, SecY subunit [Haemophilus sputorum HK 2154]
gi|400375561|gb|EJP28457.1| preprotein translocase, SecY subunit [Haemophilus sputorum HK 2154]
Length = 441
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 138/276 (50%), Gaps = 18/276 (6%)
Query: 158 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 215
R LFV LIV RIG FIP+PG D ++ + +D F GA + S F L
Sbjct: 21 RLLFVLGALIVF-RIGSFIPVPGIDASVLSELIKQQQGTIIDMFNMFSGGALSRASIFAL 79
Query: 216 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 275
GI P I ASI++Q+L I P L +L+KEG G KI Y + +L A ++++ V+ +L
Sbjct: 80 GIMPYISASIIIQLLTAIHPPLAELKKEGEAGRRKISKYTRYGTLLLAFIQSIGVSI-AL 138
Query: 276 P--YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 333
P S + ++ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 139 PNMQSGLVVNPNMLFYITSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVADLPS 198
Query: 334 TLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAARE 392
T+ + + Q + P +L L+ V VT + V V G R++ + Y A+R+
Sbjct: 199 TIGQTIEQARAGDLS--PIVLLLIAVIAFAVTYFVVFVERGQRRIVVNY-------ASRQ 249
Query: 393 DSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+ ++P +N +G+ P + + ++ FP+
Sbjct: 250 QGRMMAPARSSHLPLKVNMAGVIPAIFASSVILFPA 285
>gi|15599439|ref|NP_252933.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAO1]
gi|107103758|ref|ZP_01367676.1| hypothetical protein PaerPA_01004829 [Pseudomonas aeruginosa PACS2]
gi|116052278|ref|YP_788876.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152983770|ref|YP_001346243.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PA7]
gi|218889429|ref|YP_002438293.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa LESB58]
gi|296387200|ref|ZP_06876699.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAb1]
gi|313111397|ref|ZP_07797202.1| secretion protein SecY [Pseudomonas aeruginosa 39016]
gi|355652594|ref|ZP_09056854.1| preprotein translocase subunit secY [Pseudomonas sp. 2_1_26]
gi|386056756|ref|YP_005973278.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa M18]
gi|386068390|ref|YP_005983694.1| preprotein translocase subunit [Pseudomonas aeruginosa NCGM2.S1]
gi|392982099|ref|YP_006480686.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa DK2]
gi|416860432|ref|ZP_11914271.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 138244]
gi|416877950|ref|ZP_11920081.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 152504]
gi|418588002|ref|ZP_13152020.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589202|ref|ZP_13153130.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P2]
gi|419756660|ref|ZP_14283005.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137298|ref|ZP_14645288.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CIG1]
gi|421151779|ref|ZP_15611381.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
14886]
gi|421157766|ref|ZP_15617111.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
25324]
gi|421165628|ref|ZP_15623950.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
700888]
gi|421172472|ref|ZP_15630242.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CI27]
gi|421178605|ref|ZP_15636215.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa E2]
gi|421518793|ref|ZP_15965467.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAO579]
gi|424938893|ref|ZP_18354656.1| secretion protein SecY [Pseudomonas aeruginosa NCMG1179]
gi|451982924|ref|ZP_21931222.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Pseudomonas
aeruginosa 18A]
gi|452877863|ref|ZP_21955112.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
VRFPA01]
gi|81783585|sp|Q9HWF5.1|SECY_PSEAE RecName: Full=Protein translocase subunit SecY
gi|9950460|gb|AAG07631.1|AE004841_9 secretion protein SecY [Pseudomonas aeruginosa PAO1]
gi|115587499|gb|ABJ13514.1| secretion protein SecY [Pseudomonas aeruginosa UCBPP-PA14]
gi|150958928|gb|ABR80953.1| secretion protein SecY [Pseudomonas aeruginosa PA7]
gi|218769652|emb|CAW25412.1| secretion protein SecY [Pseudomonas aeruginosa LESB58]
gi|310883704|gb|EFQ42298.1| secretion protein SecY [Pseudomonas aeruginosa 39016]
gi|334837564|gb|EGM16321.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 138244]
gi|334838969|gb|EGM17669.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 152504]
gi|346055339|dbj|GAA15222.1| secretion protein SecY [Pseudomonas aeruginosa NCMG1179]
gi|347303062|gb|AEO73176.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa M18]
gi|348036949|dbj|BAK92309.1| preprotein translocase subunit [Pseudomonas aeruginosa NCGM2.S1]
gi|354823932|gb|EHF08195.1| preprotein translocase subunit secY [Pseudomonas sp. 2_1_26]
gi|375041241|gb|EHS33951.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051964|gb|EHS44425.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P2]
gi|384396415|gb|EIE42833.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317604|gb|AFM62984.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa DK2]
gi|403249944|gb|EJY63410.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CIG1]
gi|404348275|gb|EJZ74624.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAO579]
gi|404526651|gb|EKA36853.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
14886]
gi|404537738|gb|EKA47321.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CI27]
gi|404541190|gb|EKA50558.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
700888]
gi|404548209|gb|EKA57173.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa E2]
gi|404550291|gb|EKA59052.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
25324]
gi|451759393|emb|CCQ83745.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Pseudomonas
aeruginosa 18A]
gi|452185419|gb|EME12437.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
VRFPA01]
gi|453042422|gb|EME90166.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
PA21_ST175]
Length = 442
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 19/302 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAALFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGESGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ L A S+ V V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSV-GLGSQGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVA 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 193 GLPRAIGQSFESARQGDINIFALIGVGLLAVAIIA--FVVFIERGQRRIAVHY-----AK 245
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEIL 444
+ ++P +N +G+ P + + +L FP+ L S G + Q V + +
Sbjct: 246 RQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAI 305
Query: 445 NP 446
P
Sbjct: 306 AP 307
>gi|76798219|ref|ZP_00780469.1| Preprotein translocase secY subunit [Streptococcus agalactiae
18RS21]
gi|76586428|gb|EAO62936.1| Preprotein translocase secY subunit [Streptococcus agalactiae
18RS21]
Length = 332
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 169/344 (49%), Gaps = 60/344 (17%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++ T ++++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRNKILFTIFILLVFRIGTHITVPGINVKSLEQMGELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLFLAFVQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + +V+ ++ +L G+M ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVKTPNVQTYLLIGAILTTGSMVVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGY---TETLYK-MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 376
GI++ T+Y+ + S++ +G+L IV + A+V + + K
Sbjct: 187 GIISSIPSAITTIYEDFFVNVRSSAITNSYIFVGIL----IVAVLAIVFFTTFIQQAEYK 242
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY KL A S Y+P +NP+G+ PV+ + + PS + PF
Sbjct: 243 IPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTII-----PF 288
Query: 437 WQHVKEI---------LNPETSVGARPWVYYTIYAFFVFLFNIF 471
+Q+ KEI LN +T VG IYA + LF+ F
Sbjct: 289 FQNGKEIPWLTKLQELLNYQTPVGM------IIYAILIILFSFF 326
>gi|433456035|ref|ZP_20414097.1| preprotein translocase subunit SecY [Arthrobacter crystallopoietes
BAB-32]
gi|432196817|gb|ELK53242.1| preprotein translocase subunit SecY [Arthrobacter crystallopoietes
BAB-32]
Length = 437
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 146/299 (48%), Gaps = 22/299 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDEL 201
+L+ F ++RR+L T +I + R+G FIP PG D + Q L SG + +
Sbjct: 1 MLSAIGRVFRTPDLRRKLLFTLGIITVYRLGVFIPAPGVDYGNVQQCLALGNTSGGLYQF 60
Query: 202 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ GA L++S F LGI P I ASI++Q+L ++P +L +EG G K+ Y ++
Sbjct: 61 VNLFSGGALLQVSIFALGIMPYITASIIVQLLRVVIPRFQELHQEGPQGQSKLTQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
++ +L A + + ++ S+ +++ L G + W+ + ++
Sbjct: 121 TIALGLLNATTLISLARSGALLGDCPLPIIPDDSLVVIVLLIITLTAGTGLIMWMGELVT 180
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
E G G G SL+I V I G+ +L ++L V + ++ ++G+FT+ + + V
Sbjct: 181 EKGVGNGMSLLIFVSIAAGFPSSLGEILR---AQGVNIFIGVI-IIGLFTVAAV--IFVE 234
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ R++ +QY A + YIP +N +G+ PV+ + +L PS++A
Sbjct: 235 QSQRRIPVQY-----AKRMVGRRTVGGTSTYIPIKVNMAGVIPVIFASSMLYLPSLIAQ 288
>gi|50902533|gb|AAT86248.1| Protein translocase subunit secY [Streptococcus pyogenes MGAS10394]
gi|71801824|gb|AAX71177.1| protein translocase subunit [Streptococcus pyogenes MGAS6180]
gi|94541203|gb|ABF31252.1| protein translocase subunit [Streptococcus pyogenes MGAS9429]
gi|94545072|gb|ABF35119.1| Protein translocase subunit secY [Streptococcus pyogenes MGAS2096]
gi|94546972|gb|ABF37018.1| Protein translocase subunit secY [Streptococcus pyogenes MGAS10750]
Length = 450
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 164/339 (48%), Gaps = 50/339 (14%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 31 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 82
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 83 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 142
Query: 268 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A + +L + +K ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 143 IGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 202
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 376
GI++ + + + S + ++G+L I+ + A+V V + K
Sbjct: 203 GIISSIPSAIATIREDYFVNVKASDLHSSYLIVGIL----IIAVLAIVFFTTYVQQAEYK 258
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 434
+ +QY KL A S Y+P +NP+G+ PV+ + + PS + + +
Sbjct: 259 IPIQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGR 309
Query: 435 --PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P+ ++EI N +T VG +YA + LF+ F
Sbjct: 310 DLPWLNRLQEIFNYQTPVG------MIVYALLIILFSFF 342
>gi|392423914|ref|YP_006464908.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
acidiphilus SJ4]
gi|391353877|gb|AFM39576.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
acidiphilus SJ4]
Length = 428
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 162/337 (48%), Gaps = 44/337 (13%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFG 205
+++R+++ T ++ +I RIG IP+P + ++ D++ +SG G
Sbjct: 13 ADLRKKIGYTLLMFLIFRIGAHIPIPFVNHEVLKNMLGTGGMFDFMDTLSG--------G 64
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLG-- 261
+ +L+ F L I+P + ASI++Q+L ++PSL +L KEG G +KI Y + ++LG
Sbjct: 65 SFKRLTVFALSITPYVTASIILQLLTIVIPSLERLSKEGEYGRKKITQYTRYGTVALGFI 124
Query: 262 ------FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
F I A++V + +++Y ++ A +L G + W+ + I+E+G
Sbjct: 125 QAFGLTFGIRTALMVPSSAWKWAVY---------LLVALVLTAGTAFLMWLGEAITENGV 175
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G SLII GI++ L + S + + +LGL + + + V EG R
Sbjct: 176 GNGISLIIFAGIVSRVPSALGYLYSLFTVHEINIFS-LLGLAVIVVFIIAGVIYVQEGTR 234
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GS 434
+V +QY A +IP +N +G+ PV+ LLAFP +A+ + S
Sbjct: 235 RVSVQY-----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAISLLAFPQTIATWMPTS 289
Query: 435 PFWQHVKEILNPETSVGARPW--VYYTIYAFFVFLFN 469
F + V + +V + P+ VY + FF + +
Sbjct: 290 GFARFVNTWFSMNGTVQSIPYLLVYGVLIIFFTYFYT 326
>gi|260549820|ref|ZP_05824036.1| secretion protein [Acinetobacter sp. RUH2624]
gi|425741860|ref|ZP_18859991.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-487]
gi|260407070|gb|EEX00547.1| secretion protein [Acinetobacter sp. RUH2624]
gi|425489720|gb|EKU56022.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-487]
Length = 452
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + L+ G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|421145997|ref|ZP_15605801.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487605|gb|EJG08556.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+ +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGE-----KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|127511112|ref|YP_001092309.1| preprotein translocase subunit SecY [Shewanella loihica PV-4]
gi|126636407|gb|ABO22050.1| protein translocase subunit secY/sec61 alpha [Shewanella loihica
PV-4]
Length = 446
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + + G++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELF-NQQKGTI--LGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y + +L +A+
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRYGTLVLGTFQAI 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + +L + VF VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLIAVIVFA-VTYFVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P +N +G+ P + + ++ FP LA G
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|424057932|ref|ZP_17795449.1| preprotein translocase, SecY subunit [Acinetobacter nosocomialis
Ab22222]
gi|407439962|gb|EKF46483.1| preprotein translocase, SecY subunit [Acinetobacter nosocomialis
Ab22222]
Length = 450
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 21 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 76
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 77 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 136
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + L+ G M + W+ + I+E G G G S+II G
Sbjct: 137 AVGM-CAGLIGQGITLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAG 195
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 196 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 249
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 250 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 297
>gi|421526088|ref|ZP_15972697.1| preprotein translocase subunit SecY [Fusobacterium nucleatum ChDC
F128]
gi|402257847|gb|EJU08320.1| preprotein translocase subunit SecY [Fusobacterium nucleatum ChDC
F128]
Length = 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 157/323 (48%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGLSFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
I E + YIP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 ----KGGIGE-KSYIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMIMYALVIMFFSFF 324
>gi|302524013|ref|ZP_07276355.1| preprotein translocase, SecY subunit [Streptomyces sp. AA4]
gi|302432908|gb|EFL04724.1| preprotein translocase, SecY subunit [Streptomyces sp. AA4]
Length = 435
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 52/357 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------GA 206
++R+++ T ++ + RIG IP PG + + D+ G + GA
Sbjct: 13 DLRKKILFTLAIVAVYRIGATIPAPGVSFAAVQA-----CTAQADQQGVYQLLNLFSGGA 67
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
L+LS F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ AIL+
Sbjct: 68 LLQLSLFATGIMPYITASIIIQLLTVVIPRFEELKKEGQSGQNKLTQYTRYLTIALAILQ 127
Query: 267 AVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
A V + +++ +S+ + + + G M W+ + I+E G G G
Sbjct: 128 ATGVVALADRGTLFQGCSQPIIPDNSIYSLTLIVVTMTAGTAVMMWLGELITERGVGNGM 187
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVK 378
S++I + I ++S G + L ++ F +V + +V+ V +G R++
Sbjct: 188 SVLIFLNIAARIPAEGANIISNGGGIA-------LVVVLAFGLVIIASVIFVEQGQRRIP 240
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--- 435
+QY A Y+P +N +G+ PV+ + LL P +L+ ++G P
Sbjct: 241 VQY-----AKRMVGRRMYGGTSTYLPIKVNQAGVIPVIFASSLLYLPQLLSQLIGDPQSN 295
Query: 436 -FWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
WQ ++ L ++S WV+ +Y + F F I TIT V++
Sbjct: 296 SGWQSFIQNYLVNQSS-----WVHILLYFLLIIFFTYFYI---------TITFNVDE 338
>gi|389703891|ref|ZP_10185685.1| preprotein translocase subunit SecY [Acinetobacter sp. HA]
gi|388611273|gb|EIM40377.1| preprotein translocase subunit SecY [Acinetobacter sp. HA]
Length = 452
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 147/292 (50%), Gaps = 24/292 (8%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IP+PG + + ++ + G++ LG F GA
Sbjct: 23 YREIIRRMMFLIGALLVF-RLGAHIPVPGINNAAL-ENLFNANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y +L A ++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRQGTLFLAFVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
AV + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 AVGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYY 382
GI+ G L ++ Q L S ++GL + +I + A+V E R++ + Y
Sbjct: 197 GIVAG----LPTLVMQSLTSVDNGQSSLIGLAIFALLSIAVLAAIVFIEKAQRRIPVNY- 251
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|367470178|ref|ZP_09469894.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Patulibacter
sp. I11]
gi|365814756|gb|EHN09938.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Patulibacter
sp. I11]
Length = 425
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 47/342 (13%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF--- 204
+F EIR+++ +L+ + RIG IP+PG + Q+ SF G +L +
Sbjct: 8 AFTVPEIRKKIGFALLLLALYRIGAQIPVPGVSSEGVKALQESASFQGGGALQLLNVFSG 67
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA +++ F LGI P I ASI++Q+L +VPSL +L++EG G ++I Y ++++ A
Sbjct: 68 GALSQIAIFALGIMPYITASIVLQLLQVVVPSLEKLKQEGEIGQQRITQYTRYLTVALAA 127
Query: 265 LEAVIVACYSLPYSIYAA-----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+++ S A + + HV + A L GAM + W+ + I++ G G G
Sbjct: 128 GQSIAYVFLFKSLSGQAGEPLITNFNAGHVFMIAVSLTAGAMIVMWMGELITQRGIGNGM 187
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWP-----FMLGLLGVFTIVTMWAVV-VTEG 373
SL+I I++G + WW F + L+ + + AVV + EG
Sbjct: 188 SLMIFASIVSGLPSGVSN-----------WWQSGDQVFKV-LMPFLALAVIAAVVFIQEG 235
Query: 374 CRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
R++ +QY G +++ + Y+P +N + + PV+ +++ P +A
Sbjct: 236 QRRIPIQYAKRVIGRRMSGGG---------QTYLPLKVNMANVIPVIFAASIMSIPPTIA 286
Query: 430 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ V+E+ A W Y F+ LF F
Sbjct: 287 QFVTKDPSNSVQELFR------AGGWAYIGGETIFIILFTYF 322
>gi|260770933|ref|ZP_05879862.1| preprotein translocase SecY subunit [Vibrio furnissii CIP 102972]
gi|375129807|ref|YP_004991905.1| preprotein translocase subunit SecY [Vibrio furnissii NCTC 11218]
gi|260614170|gb|EEX39360.1| preprotein translocase SecY subunit [Vibrio furnissii CIP 102972]
gi|315178979|gb|ADT85893.1| preprotein translocase subunit SecY [Vibrio furnissii NCTC 11218]
Length = 444
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RL +++ R G F+P+PG D ++ D G++ E+ + GA +
Sbjct: 17 SELKSRLLFVVGALLVFRAGSFVPIPGIDAAVLA-DLFEQQKGTIIEMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SIFALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + ++ LV G M + W+ + I+E G G G SL+I GI+
Sbjct: 136 AT-GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVVAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P IN +G+ P + + ++ FP LA G
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQ 294
>gi|402698205|ref|ZP_10846184.1| preprotein translocase subunit SecY [Pseudomonas fragi A22]
Length = 442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y ++++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMSAVSPQLEQLKKEGEAGRRKISQYTRYLTVALALVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + + V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVAFTGDLGFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFSGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L + G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ 291
>gi|345870994|ref|ZP_08822943.1| preprotein translocase, SecY subunit [Thiorhodococcus drewsii AZ1]
gi|343921148|gb|EGV31872.1| preprotein translocase, SecY subunit [Thiorhodococcus drewsii AZ1]
Length = 450
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 22/328 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
+E+R+RL +++ RIG FIP+PG + + + F LG F GA
Sbjct: 19 TELRQRLLFLLGALLVYRIGTFIPVPGVNPEALA---ILFDQNQGSILGMFNMFSGGALK 75
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LG+ P I ASI++Q++ +VP L QL+KEG G KI Y + ++ A +AV
Sbjct: 76 RASLFALGVMPYISASIIVQLMTSVVPQLEQLKKEGESGRRKITQYTRYGTVFLATFQAV 135
Query: 269 IVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++ +L S V H V LV G M + W+ + I+E G G G S+II
Sbjct: 136 GISM-ALQSQTAGGSALVSHAGVGFVFTATVTLVTGTMFLMWLGEQITERGIGNGISMII 194
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
GI+ G L L +L + +L L + VT + V V G R++ + Y
Sbjct: 195 FSGIVAGLPAALGGTL-ELARTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
A + + ++P +N +G+ P + + ++ FP L GS ++ + I
Sbjct: 252 ---ARRQQGRRMMQAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSS--ENYRWI 306
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + + +Y +Y+ + F F
Sbjct: 307 ADITSKLAPGEPIYVILYSAAIIFFCFF 334
>gi|262377292|ref|ZP_06070516.1| preprotein translocase, SecY subunit [Acinetobacter lwoffii SH145]
gi|262307745|gb|EEY88884.1| preprotein translocase, SecY subunit [Acinetobacter lwoffii SH145]
gi|407009715|gb|EKE24800.1| hypothetical protein ACD_6C00034G0009 [uncultured bacterium]
Length = 452
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR +F+ L+V R+G IP+PG + + ++ + G++ LG F GA
Sbjct: 23 YREIIRRMMFLIGALLVF-RLGAHIPVPGINNAAL-ENLFNANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRQGTLFLALVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
A I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 A-IGMCAGLISQGITLNTGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L ++ Q S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLIMQSFSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|254383152|ref|ZP_04998506.1| preprotein translocase subunit secY [Streptomyces sp. Mg1]
gi|194342051|gb|EDX23017.1| preprotein translocase subunit secY [Streptomyces sp. Mg1]
Length = 437
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 148/307 (48%), Gaps = 24/307 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSG--SV 198
+L A++F ++R++L T +IV+ R+G IP+PG + I D +G +
Sbjct: 1 MLTAFAQAFKTPDLRKKLLFTLGIIVLFRLGSHIPVPGVSYKNVQICVDQPGNSNGLFGL 60
Query: 199 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
L GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNLFSGGALLQITIFALGIMPYITASIILQLLTVVIPKLENLKKEGQSGTAKITQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHV---------MVTAFLLVCGAMTMSWICDT 309
++ AIL+ + + +++ + +V + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCQVASQIVPDRSIFTTVVMVITMTAGTCVVMWLGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
+++ G G G S+++ + I G+ L+ K+ ++ G V + +L L + +V
Sbjct: 181 VTDRGIGNGMSILMFISIAAGFVSALWGIKVQGKIAGGWVEFGVVILVGLAMVALV---- 236
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V V + R++ +QY + A + YIP +N +G+ PV+ + LL P++
Sbjct: 237 VFVEQAQRRIPVQYAKRMIGRRAYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 291
Query: 428 LASILGS 434
+ GS
Sbjct: 292 IVQFSGS 298
>gi|315037550|ref|YP_004031118.1| preprotein translocase subunit SecY [Lactobacillus amylovorus GRL
1112]
gi|325956023|ref|YP_004286633.1| preprotein translocase subunit SecY [Lactobacillus acidophilus
30SC]
gi|385816908|ref|YP_005853298.1| preprotein translocase subunit SecY [Lactobacillus amylovorus
GRL1118]
gi|312275683|gb|ADQ58323.1| preprotein translocase subunit SecY [Lactobacillus amylovorus GRL
1112]
gi|325332588|gb|ADZ06496.1| preprotein translocase subunit SecY [Lactobacillus acidophilus
30SC]
gi|327182846|gb|AEA31293.1| preprotein translocase subunit SecY [Lactobacillus amylovorus
GRL1118]
Length = 431
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 165/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T +++I RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLIYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ L+++ + + SS RW F + ++ +VT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKESIINNSSSDRWKGILFFIAVIVAILVVTQLVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL-TTTYLLAFPSILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ +++++ +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIITPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q +++N S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFF 326
>gi|300782630|ref|YP_003762921.1| preprotein translocase subunit SecY [Amycolatopsis mediterranei
U32]
gi|384145847|ref|YP_005528663.1| preprotein translocase subunit SecY [Amycolatopsis mediterranei
S699]
gi|399534516|ref|YP_006547178.1| preprotein translocase SecY subunit [Amycolatopsis mediterranei
S699]
gi|299792144|gb|ADJ42519.1| preprotein translocase SecY subunit [Amycolatopsis mediterranei
U32]
gi|340524001|gb|AEK39206.1| preprotein translocase subunit SecY [Amycolatopsis mediterranei
S699]
gi|398315286|gb|AFO74233.1| preprotein translocase SecY subunit [Amycolatopsis mediterranei
S699]
Length = 435
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 155/347 (44%), Gaps = 32/347 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
++R+++ T ++ + RIG IP PG + V +L + GA L+LS
Sbjct: 13 DLRKKILFTLAIVAVYRIGATIPAPGISYGAVQACSSQAQQEGVYQLLNLFSGGALLQLS 72
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ AIL+A V
Sbjct: 73 LFSTGIMPYITASIIIQLLTVVIPRFEELKKEGQSGQGKLTQYTRYLTIALAILQATGVV 132
Query: 272 CYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+ ++ +SV + + + G M W+ + I+E G G G S++I
Sbjct: 133 ALADRKQLFPDCQSPIIPDNSVYSLAIIVITMTAGTAVMMWLGELITERGVGNGMSVLIF 192
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
+ I +LS G L ++ VF +V + +V+ V +G R++ +QY
Sbjct: 193 LNIAARIPVEGGNILSNAGGVG-------LAIVCVFGLVIIASVIFVEQGQRRIPVQYAK 245
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
+ + Y+P +N +G+ PV+ + LL P +++ ++G ++
Sbjct: 246 RMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLISRLVGDQNANSGWQV 300
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
V WV+ +Y + F F I TIT V++
Sbjct: 301 FIKNYIVNQSSWVHIALYFALIIFFTYFYI---------TITFNVDE 338
>gi|237742652|ref|ZP_04573133.1| protein translocase subunit secY [Fusobacterium sp. 4_1_13]
gi|229430300|gb|EEO40512.1| protein translocase subunit secY [Fusobacterium sp. 4_1_13]
Length = 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGTG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+ +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGE-----KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|399924255|ref|ZP_10781613.1| preprotein translocase subunit SecY [Peptoniphilus rhinitidis 1-13]
Length = 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 170/345 (49%), Gaps = 20/345 (5%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ E++ +R+++ T +++I R+G IP+P + ++I Q +S GS+
Sbjct: 1 MLSTFKEAWKVESLRKKMLFTLFMLLIYRLGSHIPVPYMNSQVISQ-LMSGADGSIFSFL 59
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
D G + + F I P + ASI++Q+L +PSL L KEG G + I Y ++S
Sbjct: 60 DLMAGGNFRRFTIFAANIYPYVTASIILQLLTIAIPSLESLAKEGETGRKAIAKYTRYLS 119
Query: 260 LGFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A+++A+ Y+ + + A+ +++++ V +V G + WI + I+E G G
Sbjct: 120 IAIALVQAI---GYTFGFFRTAINATTTIEYITVI-ISIVAGTAILVWIGEQITEHGIGN 175
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRK 376
G S++I GI++ + + K ++ L + + P L L + +I + ++ V +TEG R+
Sbjct: 176 GISILIFAGIVSRFPIDIAKSIA--LVKAGQASPVFLVLFVIISIAIVVFVVTLTEGERR 233
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A +IP + +G+ P++ LLA P+ +A
Sbjct: 234 IPVQY-----AKRVVGRKMYGGQSTHIPIKVLMTGVMPIIFANSLLAIPATIAMFTSEST 288
Query: 437 WQHVKEILNPETSVGARPWVYYTI--YAFFVFLFNIFDIVSILYT 479
+++ L P GA ++ +T+ FF F + ++ Y+
Sbjct: 289 RNWIQKWLTPAGGPGAVIYIIFTVILIVFFTFFYTTIQFNTVEYS 333
>gi|392952496|ref|ZP_10318051.1| preprotein translocase subunit SecY [Hydrocarboniphaga effusa
AP103]
gi|391861458|gb|EIT71986.1| preprotein translocase subunit SecY [Hydrocarboniphaga effusa
AP103]
Length = 467
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 158/329 (48%), Gaps = 21/329 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E+R RL IV+ RIG FIP+PG D R + Q + +D F GA +LS
Sbjct: 18 GEVRGRLLFLLGAIVVFRIGSFIPVPGIDPRQLEQLFNQTQGSILDMFNMFSGGALHRLS 77
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LG+ P I ASI++Q++ +VP L +L+KEG G ++ Y + +L AI ++V A
Sbjct: 78 IFALGVMPYISASIIVQLMAAVVPQLKELKKEGESGRRQLTKYTRYGTLALAIFQSV-GA 136
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
+L S A + V LV G M + W+ + I+E G G G S+II GI+ G
Sbjct: 137 ATALQSSGVAINPGFGFVFTATVSLVTGTMFLMWLGEQITERGIGNGMSMIIFSGIVAGL 196
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLA 387
L +QL+ ++ +L + +VT+ V V R++ + + G KL
Sbjct: 197 PPAL-GATAQLVSEGSVSGLVVIVVLALVALVTLGVVFVERAQRRIPVHHARRQQGRKLF 255
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASILGSPFWQHVKEILNP 446
+A + ++P +N +G+ P + + ++ FP SI+ G ++++ N
Sbjct: 256 AAQTQ---------HLPLKLNMAGVIPPIFASSIILFPASIVRFFGGEGGGGFLQQLANA 306
Query: 447 ETSVGARPWVYYTIY-AFFVFLFN--IFD 472
+ A V Y + FF F + +FD
Sbjct: 307 LSPGQALHGVLYAVLIIFFCFFYTALVFD 335
>gi|339624396|ref|ZP_08660185.1| preprotein translocase subunit SecY [Fructobacillus fructosus KCTC
3544]
Length = 432
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 39/327 (11%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF--GAELK 209
+ +IR+++ T LI + RIG I +PG + P S SG ++ L F G L
Sbjct: 11 QKDIRKKMLWTVFLIFVYRIGTHITVPGVN----PAALQSVANSGLLNILNIFSGGGLLN 66
Query: 210 LSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
S F +G+SP + A I++Q+L IVP V+ K+G G K+ ++++ FA L++V
Sbjct: 67 FSLFAMGVSPYVTAQIVVQLLQLDIVPRFVEWSKQGEVGRRKLNQATRYLTIIFAFLQSV 126
Query: 269 IVACYSLPYSIYAASHSVKHVM-VTAFLLVCGAMTMS-----WICDTISESGFGQGSSLI 322
+ ++ AA VK VT+FLL+ MTM W+ + I+E G G G S+I
Sbjct: 127 GITA---GFNSLAAYGLVKQTNNVTSFLLIGSVMTMGTFFAMWLGEMITEKGLGNGVSMI 183
Query: 323 ICVGIL----TGYTETLYKMLSQLLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
I GI+ + + E + + Q S V W F+ L+ ++ E RK+
Sbjct: 184 IFSGIISQTPSAFKEIFTENVLQASKSQVVNGWIFVAVLVLAIILIIGITTWFYEAARKL 243
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF- 436
++QY SAA S E Y+P +N SG+ PV+ + L++ P + S +
Sbjct: 244 QIQY----TRSAASYGS-----EAYLPLKLNVSGVIPVIFASSLISTPQTILFAFQSKYS 294
Query: 437 ---WQHV-KEILNPETSVGARPWVYYT 459
W V KEI + +T GA V+YT
Sbjct: 295 SDQWFKVLKEIFSMQTITGA---VFYT 318
>gi|427423983|ref|ZP_18914120.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-136]
gi|425699091|gb|EKU68710.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-136]
Length = 452
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|347533177|ref|YP_004839940.1| preprotein translocase subunit SecY [Roseburia hominis A2-183]
gi|345503325|gb|AEN98008.1| preprotein translocase subunit SecY [Roseburia hominis A2-183]
Length = 442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 142/284 (50%), Gaps = 22/284 (7%)
Query: 163 TAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELKLSFFQLGI 217
T +++++ RIG +P+PG D + F S + D +G F G+ ++S F L I
Sbjct: 21 TFLMLIVIRIGSCLPIPGVDSDVFAN---WFASQTADGMGFFDAITGGSFYRMSIFALNI 77
Query: 218 SPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC----- 272
+P I +SI+MQ+L +P L +++++G +G +KI ++++ A++EAV +
Sbjct: 78 TPYITSSIIMQLLTIAIPKLEEMQRDGEEGRKKIAEITRYLTVALALIEAVAMTIGFRRG 137
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
L +S + V +++ F L G+ + WI + I+E G G G S+++ + I++
Sbjct: 138 GYLEFS--SGYQGVLDIIMVIFTLTAGSAVLMWIGERITEKGVGNGISIVLTINIISRMP 195
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM--WAVVVTEGCRKVKLQYYGFKLASAA 390
+ + + Q + + ++ + IV M + V + G R++ +QY +
Sbjct: 196 DDIKTLYDQFISGKNVPKAILAAVIILAIIVGMVLFVVYLQGGERRIPVQY-----SKKI 250
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ + YIP +N G+ PV+ LL P I+AS+LG
Sbjct: 251 QGRKQVGGQSTYIPLKVNTGGVIPVIFAQSLLQTPVIIASLLGK 294
>gi|323483281|ref|ZP_08088671.1| preprotein translocase secY subunit [Clostridium symbiosum
WAL-14163]
gi|323691221|ref|ZP_08105497.1| preprotein translocase subunit secY [Clostridium symbiosum
WAL-14673]
gi|355626508|ref|ZP_09048783.1| preprotein translocase, SecY subunit [Clostridium sp. 7_3_54FAA]
gi|323403379|gb|EGA95687.1| preprotein translocase secY subunit [Clostridium symbiosum
WAL-14163]
gi|323504740|gb|EGB20526.1| preprotein translocase subunit secY [Clostridium symbiosum
WAL-14673]
gi|354820828|gb|EHF05233.1| preprotein translocase, SecY subunit [Clostridium sp. 7_3_54FAA]
Length = 438
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 153/298 (51%), Gaps = 24/298 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F EIR +L T ++V+ R+G +P+PG D + + F S D G
Sbjct: 1 MLKTLQNAFKIKEIREKLLYTFFMLVVIRLGSQLPIPGVDTKFFAE---LFARQSSDAFG 57
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F G+ +S F L I+P I +SI+MQ+L +P L ++++EG DG +KI Y +
Sbjct: 58 FFNTITGGSFTNMSVFALSITPYITSSIIMQLLTIAIPKLEEMQREGEDGRKKIAEYTRY 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+++G A+++++ ++ + ++V ++ A + AM M WI + I+E G G
Sbjct: 118 LTVGLALMQSIAMSVGFGGRGLLIDFNAVSVIVAIATMTSGSAMLM-WIGERITERGVGN 176
Query: 318 GSSLIICVGILTGYTETLYKMLSQ-LLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCR 375
G S+++ I++ + + + L+G +V ++ +L + + ++ +V+ +G R
Sbjct: 177 GISIVLLFNIISTLPSDMITLYERFLVGKNVPVATVSLIIILAIILAMVVFVIVLQDGER 236
Query: 376 KVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
++ +QY G K+ + IP +N +G+ PV+ + L++FP ++A
Sbjct: 237 RIPVQYSKKMQGRKMVGGQSTN---------IPLKVNTAGVIPVIFASSLMSFPVVIA 285
>gi|348618224|ref|ZP_08884754.1| Preprotein translocase SecY subunit [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816471|emb|CCD29457.1| Preprotein translocase SecY subunit [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 417
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 18/311 (5%)
Query: 167 IVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVAS 224
+V+ RIG IP+PG D + + + S G + F GA + + F LGI P I AS
Sbjct: 4 LVVYRIGAHIPVPGIDPDQLSKLFQSQAGGILGMFNLFSGGALSRFTVFALGIMPYISAS 63
Query: 225 ILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASH 284
I+MQ+L + L L+KEG G KI Y + +L A +A +A +
Sbjct: 64 IVMQLLTMVSAQLEALKKEGQAGQRKITQYTRYFTLALATFQAFGIAMALEKQAGLVIDP 123
Query: 285 SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLG 344
+ ++T LV G M + W+ + I+E G G G S+II GI G + + +
Sbjct: 124 GIMFRLMTVLTLVTGTMFLMWLGEQITERGLGNGISIIIFAGIAAGLPNAIGGLFELVRT 183
Query: 345 SSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIP 404
S+ +L ++ + VT V + G RK+ + Y ++ + ++P
Sbjct: 184 HSMSIISALL-IIVLVAAVTYLVVFIERGQRKILVNYAKRQVGNKMYGGQ-----SSHLP 237
Query: 405 FNINPSGMQPVLTTTYLLAFPSILASIL----GSPFWQHVKEILNPETSVGARPWV--YY 458
+N +G+ P + + ++ FP+ +AS G+ + QH+ +L P G P+V Y
Sbjct: 238 LKLNMAGVIPPIFASSIILFPATIASWFSAGAGTRWLQHIATLLAP----GQPPYVILYA 293
Query: 459 TIYAFFVFLFN 469
FF F +
Sbjct: 294 LAIVFFCFFYT 304
>gi|445432096|ref|ZP_21439001.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC021]
gi|444759156|gb|ELW83639.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC021]
Length = 440
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + L+ G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 239
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 287
>gi|59710864|ref|YP_203640.1| preprotein translocase subunit SecY [Vibrio fischeri ES114]
gi|197334051|ref|YP_002155016.1| preprotein translocase subunit SecY [Vibrio fischeri MJ11]
gi|423684974|ref|ZP_17659782.1| preprotein translocase subunit SecY [Vibrio fischeri SR5]
gi|59478965|gb|AAW84752.1| preprotein translocase membrane subunit [Vibrio fischeri ES114]
gi|197315541|gb|ACH64988.1| preprotein translocase, SecY subunit [Vibrio fischeri MJ11]
gi|371496021|gb|EHN71615.1| preprotein translocase subunit SecY [Vibrio fischeri SR5]
Length = 443
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 16/295 (5%)
Query: 146 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF- 204
N+A+S R LFV L+V R G F+P+PG D ++ D G++ EL +
Sbjct: 10 NSAQSGLAELKSRLLFVIGALLVF-RAGSFVPIPGIDAAVLA-DLFEQQQGTIIELFNMF 67
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA + S LGI P I ASI++Q+L + P L +L+KEG G KI Y + +L
Sbjct: 68 SGGALSRASILALGIMPYISASIVVQLLTVVHPPLAELKKEGESGRRKINQYTRYGTLVL 127
Query: 263 AILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
A +A+ +A LP I A+ + + LV G M + W+ + I+E G G G S
Sbjct: 128 ATFQAIGIAT-GLPSMIPGLVANPDMMFYLTATVSLVTGTMFLMWLGEQITERGIGNGIS 186
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKL 379
LII GI+ G + + + Q + +L L+ V + ++ VV E G R++ +
Sbjct: 187 LIIFTGIVAGLPPAIGETIQQARQGELHV--LLLLLIAVISFAVIYFVVFMERGQRRIVV 244
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
Y A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 245 NY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGG 294
>gi|375147881|ref|YP_005010322.1| protein translocase subunit secY/sec61 alpha [Niastella koreensis
GR20-10]
gi|361061927|gb|AEW00919.1| protein translocase subunit secY/sec61 alpha [Niastella koreensis
GR20-10]
Length = 443
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 9/280 (3%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAELKLSF 212
E+R ++ VT LI + R+G I LPG D ++ + G +D GA + S
Sbjct: 15 EELRSKILVTIALIAVYRLGTHIVLPGIDPEKITVNQAGGGILGLIDAFAG-GAFHQASI 73
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
LGI P I ASI +Q++ + P +L+KEG G +KI Y ++++ IL+A
Sbjct: 74 LALGIMPYISASIFIQLMTILYPPFQKLQKEGDSGRKKINQYTRYLTVLVTILQASAYVA 133
Query: 273 YSLPYSIYAASHSVKHV--MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 330
+ + A S K + T +L G + + W+ + I++ G G GSS+II VGIL
Sbjct: 134 FLNTTNAQAMVESYKPYFWVSTTIILTAGTLFVMWLSEKITDKGLGNGSSVIIMVGILAR 193
Query: 331 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ +++++ S + + + + M +++ +G RKV +QY A
Sbjct: 194 FPQSIWQEWSARSNRGGGGLLIFVIEIAILVAIIMGLIILIQGVRKVPVQY-----AKQI 248
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ ++P +N +G+ P++ ++ P++L++
Sbjct: 249 VGNRQFGGARQFLPLKVNSAGVMPIIFAQAIMFLPTLLSN 288
>gi|254391373|ref|ZP_05006576.1| preprotein translocase subunit secY [Streptomyces clavuligerus ATCC
27064]
gi|294814487|ref|ZP_06773130.1| Preprotein translocase secY subunit [Streptomyces clavuligerus ATCC
27064]
gi|326442876|ref|ZP_08217610.1| preprotein translocase subunit SecY [Streptomyces clavuligerus ATCC
27064]
gi|197705063|gb|EDY50875.1| preprotein translocase subunit secY [Streptomyces clavuligerus ATCC
27064]
gi|294327086|gb|EFG08729.1| Preprotein translocase secY subunit [Streptomyces clavuligerus ATCC
27064]
Length = 439
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 30/345 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI------PQDYLSFVSG 196
+L A +F ++R++L T +IV+ R+G IP PG D + + Q+ + + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLYRLGSHIPTPGIDYQNVQICVDQAQENNNSLFG 60
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
V+ GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 LVNMFSG-GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTR 119
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWIC 307
++++ A+L+ + + ++++ ++ + G + W+
Sbjct: 120 YLTIALAVLQGTGLVATARSGALFSGCQVANQIVPDQSIFTTVTMVITMTAGTAAVMWLG 179
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
+ I++ G G G S+++ + I G+ L+ + G + W ++ V ++
Sbjct: 180 ELITDRGIGNGMSILMFISIAAGFPGQLWAIKES--GKLAQGWIEFGTVIAVGFVMVGLV 237
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 238 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 292
Query: 428 LASI-LGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLF 468
+A G+ W K + G P+ Y+ + FF F +
Sbjct: 293 VAQFSSGTSEW---KTWIEKYFVTGDHPYYITAYFILIVFFAFFY 334
>gi|399522433|ref|ZP_10763097.1| secY [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109867|emb|CCH39658.1| secY [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 21/303 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 209
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L A ++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAFVQAIG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + ++ V +T F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSVGLASQGVAFSGDFGFHFVAITTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPSAIGQSFESARQGDINIFALIAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEI 443
+ ++P +N +G+ P + + LL FP+ L + G + Q + +
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSLLLFPASLGAWFGQSEGLGWLQDISQA 304
Query: 444 LNP 446
+ P
Sbjct: 305 IAP 307
>gi|114561356|ref|YP_748869.1| preprotein translocase subunit SecY [Shewanella frigidimarina NCIMB
400]
gi|114332649|gb|ABI70031.1| protein translocase subunit secY/sec61 alpha [Shewanella
frigidimarina NCIMB 400]
Length = 446
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + F LG F GA
Sbjct: 16 SELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAE---LFAQQKDTILGMFNMFSGGALE 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y + +L L++V
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRYGTLVLGTLQSV 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + A+ V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLMPGLVANPGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + Q + +L + VF VT V V G R++ + Y
Sbjct: 192 IVAGLPSAIGSTAEQARQGDMNVLVLLLLAVIVFA-VTYLVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P IN +G+ P + + ++ FP LA GS
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGS 293
>gi|411002559|ref|ZP_11378888.1| preprotein translocase subunit SecY [Streptomyces globisporus
C-1027]
Length = 437
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 21/300 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGMIVIYRLGAHIPAPGVDYTKVQQCIDQADSGGLLGLMQMFSG 65
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A+
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAV 125
Query: 265 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
L+ + + +++ A SV ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGDQIVADKSVFTTVIMVVTMTAGTAAVMWLGELITDRGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+++ + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSILMFISIAATFPGALWSIKESGKLADG--WIEFATVILIGFVMVGL-VVFVEQAQ 242
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + + + YIP +N +G+ PV+ + LL P+++ GS
Sbjct: 243 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSGS 297
>gi|256844449|ref|ZP_05549935.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
125-2-CHN]
gi|423319602|ref|ZP_17297477.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB049-03]
gi|423320376|ref|ZP_17298248.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB077-07]
gi|256613527|gb|EEU18730.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
125-2-CHN]
gi|405587895|gb|EKB61616.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB049-03]
gi|405606026|gb|EKB79023.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB077-07]
Length = 431
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 164/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +L+ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKLYFTLFILLLYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFIQSIGITLGFNALTQMGLVKNQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ L+++ + + +S RW F + ++ IVT + V +
Sbjct: 179 ISVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQFVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + ++ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATMSGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q +++N S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFF 326
>gi|116513033|ref|YP_811940.1| preprotein translocase subunit SecY [Lactococcus lactis subsp.
cremoris SK11]
gi|385839388|ref|YP_005877018.1| preprotein translocase subunit SecY [Lactococcus lactis subsp.
cremoris A76]
gi|414075095|ref|YP_007000312.1| Protein translocase subunit SecY [Lactococcus lactis subsp.
cremoris UC509.9]
gi|116108687|gb|ABJ73827.1| protein translocase subunit secY/sec61 alpha [Lactococcus lactis
subsp. cremoris SK11]
gi|358750616|gb|AEU41595.1| Preprotein translocase secY subunit [Lactococcus lactis subsp.
cremoris A76]
gi|413975015|gb|AFW92479.1| Protein translocase subunit SecY [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 439
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 38/341 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+F ++R R+ T ++ + R+G I +PG + + + Q ++ VSG+
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITVPGVNVQNLQQVADLPFLSMMNLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L
Sbjct: 64 ----AMQNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITL 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A+ +++ I A + S+ + + + ++ LL G+M ++W+ + I+E GFG G
Sbjct: 120 VLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTGSMVVTWMGEQINEKGFGSG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
S+II GI++G Y E + + S W F++GL+ ++ V
Sbjct: 180 VSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMS---WIFVIGLILSAIVIIYVTTFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ RKV +QY KL A S Y+P +NP+G+ PV+ + P+ +
Sbjct: 237 QQAERKVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQ 287
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L +V + + ++ W YA + LF F
Sbjct: 288 FLQRSQGSNVGWLSTLQNALSYTTWTGMLFYALLIVLFTFF 328
>gi|408790999|ref|ZP_11202610.1| preprotein translocase, SecY subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408465028|gb|EKJ88752.1| preprotein translocase, SecY subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 459
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 161/348 (46%), Gaps = 38/348 (10%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL---IPQDYLSFVSGSVDELGDF 204
A F E+R ++ T ++++ R+G + +PG + + I D G VD
Sbjct: 6 ANIFRIPELRSKILFTIGMLLLFRMGTHVTIPGINSLIVTGITADPSEGFLGMVDLFAG- 64
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA LK S F LGI P I +SI+MQ++ ++PSL +++KEG +G +KI+ Y + +L
Sbjct: 65 GALLKFSIFALGIMPYISSSIIMQLVMVLIPSLQKMQKEGEEGRKKIQQYTKYGTLILCA 124
Query: 265 LEAVIVACYSLPYSIYAASHSVKH------------VMVTAFLLVCGAMTMSWICDTISE 312
++++ V + +S + + K+ + + + G + + W+ + I+E
Sbjct: 125 IQSLAVIQLANSWSTGSGTAQAKYPGLINPSVEGYFLPIAMLSITTGTVLLIWLGEQITE 184
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SLII GI+ E L M + S +L L+ +F ++ V++T+
Sbjct: 185 RGIGNGISLIIFAGIIGRMPEALIAMFT----SDTSDALSILILIIIFIVLIALTVILTQ 240
Query: 373 GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
G R+V L Y G K+ A + IPF +N + + P++ + L+ FP +
Sbjct: 241 GVRRVPLNYGKQMVGRKMVQARSQS---------IPFKVNSANVMPIIFASSLILFPQTI 291
Query: 429 ASILGS-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L S W + + NP + + YY IY + F F
Sbjct: 292 VQWLSSKGGQWAGWAVIMDYFNPFSQIWYHALFYYVIYTSLIIFFAYF 339
>gi|269104032|ref|ZP_06156729.1| preprotein translocase SecY subunit [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163930|gb|EEZ42426.1| preprotein translocase SecY subunit [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 15/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E++ RLF I+I R G F+P+PG D ++ D G++ EL + GA +
Sbjct: 17 AELKSRLFFVLGAILIFRAGSFVPIPGIDAAVLA-DLFEQQKGTIIELFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SILALGIMPYISASIIVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP I + + V LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 AT-GLPSMIPGLVVNPGLGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 387
G + + + Q + + L+ V + ++ VV E G R++ + Y A
Sbjct: 195 AGLPPAIGQTVEQARQGELHVLLLL--LIAVISFAVIYFVVFMERGQRRIVVNY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P IN +G+ P + + ++ FP LA G
Sbjct: 248 KRQQGRRVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQ 294
>gi|451340333|ref|ZP_21910830.1| Preprotein translocase secY subunit protein [Amycolatopsis azurea
DSM 43854]
gi|449416889|gb|EMD22591.1| Preprotein translocase secY subunit protein [Amycolatopsis azurea
DSM 43854]
Length = 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 162/363 (44%), Gaps = 32/363 (8%)
Query: 139 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 198
+S VL+ + ++R+++ T ++ + RIG IP PG + + + V
Sbjct: 35 EVSRVLSAFRSALATPDLRKKILFTLAIVAVYRIGATIPAPGISYSAVQKCTETGSQEGV 94
Query: 199 DELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+L + GA L+LS F GI P I ASI++Q+L ++P +L+KEG G K+ Y
Sbjct: 95 YQLLNLFSGGALLQLSLFSTGIMPYITASIIVQLLTVVIPRFEELKKEGQSGQGKLTQYT 154
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICD 308
++++ A+L+A V + ++ +SV + + + G M W+ +
Sbjct: 155 RYLTIALAVLQATGVVALADRKQLFPQCDTAIIPDNSVYTLAIIVITMTAGTAVMMWLGE 214
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I+E G G G S++I + I +LS G + L+ VF +V + +V
Sbjct: 215 LITERGVGNGMSVLIFLNIAARIPIEGGNILSSAGG-------VVFALICVFGLVIIASV 267
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
+ V +G R++ +QY + + Y+P +N +G+ PV+ + LL P +
Sbjct: 268 IFVEQGQRRIPVQYAKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDL 322
Query: 428 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLG 487
++ ++G ++ V W + +Y + F F I TIT
Sbjct: 323 ISRLVGDANSNAGWQVFIQNYIVNQSSWAHVLLYFALIIFFTYFYI---------TITFN 373
Query: 488 VND 490
V++
Sbjct: 374 VDE 376
>gi|383767972|ref|YP_005446955.1| preprotein translocase subunit SecY [Phycisphaera mikurensis NBRC
102666]
gi|381388242|dbj|BAM05058.1| preprotein translocase SecY subunit [Phycisphaera mikurensis NBRC
102666]
Length = 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 25/293 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 209
E+R +L T ++ I R+G FIPLPG D+ + + + SG++ L F G L
Sbjct: 12 ELRNKLLFTIAMLAIYRLGSFIPLPGVDQAALAEWAENSSSGALGNLISFVAIFTGGNLG 71
Query: 210 LS-FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
S F LGI P I A+I+ Q+L + L L+KEG G +KI+ Y + ++G A+++A+
Sbjct: 72 QSTIFGLGIMPYISAAIIFQLLASVSEKLKALQKEGPAGRQKIQEYTRYATVGLAVVQAI 131
Query: 269 I---------VACYSLPYSIYAAS-HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
L Y Y + SV + L G + + W+ + I + G G G
Sbjct: 132 FWLKFMASSGAGSAPLIYPEYLSGLGSVIYWTCGLLALTAGTVFLMWLGEQIDKYGLGNG 191
Query: 319 SSLIICVGILTGYTETLYKMLSQ---LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
SLII I+ T M+ Q L G ++ L F +V+ A+++T+G R
Sbjct: 192 ISLIITASIVAS-IPTAIGMIYQGFSLRGDGQYGIGTVIFLTMSFILVSAGAIIITQGQR 250
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
++ +Q AR + Y+P +N G+ P++ + L+ FPS++
Sbjct: 251 RIPIQQ-----GKEARGRRVYGGQKSYLPLRVNHGGVMPIIFASSLMIFPSLI 298
>gi|373463270|ref|ZP_09554897.1| preprotein translocase, SecY subunit [Lactobacillus kisonensis
F0435]
gi|371764958|gb|EHO53323.1| preprotein translocase, SecY subunit [Lactobacillus kisonensis
F0435]
Length = 438
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 171/345 (49%), Gaps = 35/345 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A +F EIR ++ T ++VI R+G +I +PG + + + Q S SG V L
Sbjct: 1 MLSTLAGAFKVKEIRNKILFTLFVLVIFRLGAYITVPGINAKAL-QSVAS--SGLVSILN 57
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPRYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 260 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A ++V I A ++ S+ ++ S+K ++ +L G M +W+ D I+E G G
Sbjct: 118 VILAFFQSVGITAGFNQLSSLNLVNNPSIKTFVIIGLILTGGTMLTTWMGDMITERGIGN 177
Query: 318 GSSLIICVGILTGYTETLYKMLSQ----LLGSSVRWWP--FMLGLLGVFTIVTMWAVVVT 371
G S+II GI+ L + Q + GS + W P F + LL + + + V
Sbjct: 178 GISMIIFAGIVARIPVGLQSLWQQYFVGVTGSDL-WQPILFAIALLIIVLAIVTFVTWVQ 236
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILAS 430
+ R+V +QY + S + + S Y+P +N +G+ PV+ + +A P +IL +
Sbjct: 237 QAERRVPIQYT--RRVSGSPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILMA 287
Query: 431 ILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++Q + + N +T GA +YTI + +F F
Sbjct: 288 FTNYYSTATWFQILNNVFNMQTPTGA---AFYTI---LIIMFTFF 326
>gi|429732187|ref|ZP_19266807.1| preprotein translocase, SecY subunit [Corynebacterium durum F0235]
gi|429144422|gb|EKX87541.1| preprotein translocase, SecY subunit [Corynebacterium durum F0235]
Length = 440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDELG 202
+F ++R+++ T +I++ RIG IP PG + R + QD S S + L
Sbjct: 7 AFKDVDLRKKILFTIAMIILYRIGAQIPSPGINYASISGRLRELTQDQSSVYS--LINLF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++G
Sbjct: 65 SGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQTKMTQYTRYLTVGL 124
Query: 263 AILEAV-IVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGF 315
A+L+A IVA + +KH ++V + GA+ + WI + ++E G
Sbjct: 125 ALLQASGIVALADRGQLLGGGVEVLKHDRNIFDLVVLVLSMTAGAVLVMWIGEMMTEKGI 184
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G SL+I GI T +L++ G + ++ + V + +G R
Sbjct: 185 GNGMSLLIFAGIATRLPTDGISILTRSGGVVFAAVMAAV------VVLVVGVVFIEQGQR 238
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY K R+ + Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 239 RIPVQYA--KRMVGRRQYGGTST---YLPLKVNQAGVIPVIFASSLIYVPVLITQIVQSG 293
Query: 436 -------FWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ +V + L +S W Y +Y + F+ F
Sbjct: 294 STQPSDNWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYF 332
>gi|84499822|ref|ZP_00998110.1| preprotein translocase SecY [Oceanicola batsensis HTCC2597]
gi|84392966|gb|EAQ05177.1| preprotein translocase SecY [Oceanicola batsensis HTCC2597]
Length = 456
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 35/297 (11%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++R R+ T +L+++ R+G +IP+PG D + Q F+ G+ +G GA
Sbjct: 21 TDLRNRILFTIMLLIVYRLGTWIPVPGIDGVALRQ----FMEGAGQGIGGILSMFTGGAL 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L +VPSL ++KEG G +KI Y + ++ A L++
Sbjct: 77 GRMGIFALGIMPYISASIIVQLLASMVPSLEAIKKEGEQGRKKINQYTRYGTVFLATLQS 136
Query: 268 VIVAC---------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A +PY + A+ M+T L+ G M + W+ + I+ G G G
Sbjct: 137 YGLAVSLQSGDLVQADIPYWFFIAT-----CMIT---LIGGTMFLMWLGEQITARGLGNG 188
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 377
SLII VGI+ L + + G S P ++ + + + T+ VV E RK+
Sbjct: 189 ISLIIFVGIIAELPAALAQFFAS--GRSGAISPAVIVGVILMVVATIGFVVFMERALRKI 246
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY ++ + ++P +NP+G+ P + + LL P +++ G+
Sbjct: 247 HIQYPRRQVGMKVYDGG-----SSHLPIKVNPAGVIPAIFASSLLLLPVTISTFSGN 298
>gi|68536856|ref|YP_251561.1| preprotein translocase subunit SecY [Corynebacterium jeikeium K411]
gi|68264455|emb|CAI37943.1| preprotein translocase SecY subunit [Corynebacterium jeikeium K411]
Length = 444
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 171/351 (48%), Gaps = 40/351 (11%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS-----VDELGDF 204
+F +++R+++ + +I++ RIG IP PG D I Q +S ++ S + L
Sbjct: 7 AFKNADLRKKILFSLAMIILYRIGAQIPTPGVDYGAI-QAQISELTDSSAMYSLINLFSG 65
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+
Sbjct: 66 GALLQLSIFAVGIMPYITASIIVQLLTVVIPKFEQLKKEGQSGQAKMTEYTRYLTVALAL 125
Query: 265 LE-AVIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQ 317
L+ A IVA + +K ++V ++ GA+ + W+ + I++ G G
Sbjct: 126 LQSAGIVALADRRQLLGQGVQVLKDGTGVFGLLVMVLIMTSGAVLLMWMGELITDRGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G SL+I GI T + S GS + ++ + + + ++ + +G R++
Sbjct: 186 GMSLLIFAGIATSLPAQGASIFS---GSGGFVFAGVVVGVLILVVGVVF---IEQGQRRI 239
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSP 435
+QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ G+P
Sbjct: 240 PVQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGNP 294
Query: 436 -------FW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+W Q+V +L + W Y +Y + F+ F VS+ Y
Sbjct: 295 QGAGQDNWWNQNVMSVLTDPAA-----WQYILLYVALIIFFSFF-YVSVQY 339
>gi|375136139|ref|YP_004996789.1| preprotein translocase subunit SecY [Acinetobacter calcoaceticus
PHEA-2]
gi|325123584|gb|ADY83107.1| preprotein translocase subunit SecY [Acinetobacter calcoaceticus
PHEA-2]
Length = 439
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 10 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 65
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 66 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 125
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 126 AVGM-CAGLIGQGITLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 184
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 185 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 238
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 239 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 286
>gi|386316044|ref|YP_006012208.1| preprotein translocase subunit SecY [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|410493833|ref|YP_006903679.1| hypothetical protein SDSE_0093 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753547|ref|ZP_12401663.1| preprotein translocase, SecY subunit [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|323126331|gb|ADX23628.1| preprotein translocase subunit SecY [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|333769778|gb|EGL46870.1| preprotein translocase, SecY subunit [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|410438993|emb|CCI61621.1| secY [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
Length = 434
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + S ++ ++G +L V IV + V + K+ +
Sbjct: 187 GIISSIPNAIATIREDYFVNVKASDLQSSYLIVGILILAVLAIV-FFTTYVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + + P
Sbjct: 246 QYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDIP 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++EI N + VG +YA + LF+ F
Sbjct: 297 WLTRLQEIFNYQNPVG------MMVYAVLIILFSFF 326
>gi|357406655|ref|YP_004918579.1| preprotein translocase subunit SecY [Methylomicrobium alcaliphilum
20Z]
gi|351719320|emb|CCE24996.1| Preprotein translocase SecY subunit [Methylomicrobium alcaliphilum
20Z]
Length = 433
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 24/329 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE+R RL + R+G IP+PG D + + + SGS+ ++ + GA ++L
Sbjct: 9 SELRSRLLFVLGAFFVYRVGAHIPVPGIDPKALALMFEQ-QSGSILDMFNMFSGGALMRL 67
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F LGI P I ASI+MQ++ ++P++ Q++KEG G KI Y + ++ A +AV +
Sbjct: 68 SLFALGIMPYISASIIMQLMTVVIPTMEQMKKEGESGRRKISQYTRYGTVVLATFQAVGI 127
Query: 271 ACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ + S + V++T LV G + + W+ + ++E G G G SLII G
Sbjct: 128 SIALQNQTAGGLSVVIAPGMSFVLITTITLVTGTIFLMWLGEQVTERGIGNGISLIIFAG 187
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I++G + L +L + F++ L + VT V V G R++ + Y K
Sbjct: 188 IVSGLPSAVGGTL-ELARTGEMNSAFIILLFLLTIAVTALVVFVERGQRRIIINYP--KR 244
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKE 442
R + + ++P +N +G+ P + + ++ FP+ +A G+ + + +
Sbjct: 245 QQGRRMYAGQSS---FLPLKLNMAGVIPPIFASSIILFPATVAGWFGNAEGFGWLKDIAT 301
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+L+P +P VY YA + F F
Sbjct: 302 MLSP-----GQP-VYVMFYAAAIIFFCFF 324
>gi|429195029|ref|ZP_19187086.1| preprotein translocase, SecY subunit [Streptomyces ipomoeae 91-03]
gi|428669315|gb|EKX68281.1| preprotein translocase, SecY subunit [Streptomyces ipomoeae 91-03]
Length = 437
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 20/294 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF- 204
A +F ++R++L T +IV+ RIG +P+PG D + D S G + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRIGTHVPIPGVDYTAVQFCIDQASTNQGLFGLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
IL+ + + S++ S+ +V + G + W+ + I++ G
Sbjct: 126 ILQGTGLVATARSGSLFNGCQLAGSIVPDRSIYTTIVMVITMTAGTALVMWLGELITDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWAIKEQ--GDLADGWIEFGTVIAVGLVMVALVVFVEQAQ 243
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 244 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
>gi|409398051|ref|ZP_11248903.1| preprotein translocase subunit SecY [Pseudomonas sp. Chol1]
gi|409117557|gb|EKM93985.1| preprotein translocase subunit SecY [Pseudomonas sp. Chol1]
Length = 442
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 17/286 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + IV+ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFMAIVVYRIGAHIPVPGINPDRLAELFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L AI++AV
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAIVQAVG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + +++ V +T F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSVGLAGQGVAFSSDFGFYFVAITTF--VAGAMFMMWLGEQITERGIGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G L + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPGALGQSFESARQGDINIIALLAVGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ ++P +N +G+ P + + +L FP+ L G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGQWFG 290
>gi|331702060|ref|YP_004399019.1| preprotein translocase subunit SecY [Lactobacillus buchneri NRRL
B-30929]
gi|406027533|ref|YP_006726365.1| Preprotein translocase subunit SecY [Lactobacillus buchneri CD034]
gi|329129403|gb|AEB73956.1| preprotein translocase, SecY subunit [Lactobacillus buchneri NRRL
B-30929]
gi|405126022|gb|AFS00783.1| Preprotein translocase subunit SecY [Lactobacillus buchneri CD034]
Length = 438
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 169/344 (49%), Gaps = 33/344 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A++F +IR ++ T ++VI R+G +I +PG + + + SG V L
Sbjct: 1 MLSTLAKAFKVKDIRNKMLFTLFVLVIFRLGAYITVPGINAKALTS---VASSGLVSILN 57
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPKYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 260 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A ++V I A ++ S+ + S+K ++ +L G M +W+ D I+E G G
Sbjct: 118 VILAFFQSVGITAGFNQLSSLNLVQNPSIKTFVIIGLILTGGTMLTTWMGDMITERGLGN 177
Query: 318 GSSLIICVGILTGYTETLYKMLSQL---LGSSVRWWP--FMLGLLGVFTIVTMWAVVVTE 372
G S+II GI+ L + +Q + + W P F + LL + ++ + V +
Sbjct: 178 GISMIIFAGIIARIPVGLQSLWTQYFVGVSGADLWQPILFAIALLIIVLVIVTFVTWVQQ 237
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASI 431
R+V +QY + S + + S Y+P +N +G+ PV+ + +A P +IL +
Sbjct: 238 AERRVPIQYT--RRVSGSPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILMAF 288
Query: 432 LG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++Q + + N +T GA +YTI + +F F
Sbjct: 289 TNNYSTATWFQVLNNLFNMQTPTGA---AFYTI---LIIMFTFF 326
>gi|293610844|ref|ZP_06693144.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827188|gb|EFF85553.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 239
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 287
>gi|403251563|ref|ZP_10917896.1| preprotein translocase subunit SecY [actinobacterium SCGC
AAA027-L06]
gi|402915108|gb|EJX36098.1| preprotein translocase subunit SecY [actinobacterium SCGC
AAA027-L06]
Length = 432
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 161/340 (47%), Gaps = 25/340 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ ++F ++R+++F T ++ + R+G IP PG + + + +G + L
Sbjct: 2 LLSAFGKAFKTPDLRKKIFFTLSIMALFRLGSVIPTPGVSYVNVQECLATANTGGLFGLI 61
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I +SI++Q+L ++P L+KEG G K+ Y +++
Sbjct: 62 NLFSGGALLQLSVFALGIMPYITSSIIVQLLTVVIPRFETLKKEGQAGTAKLTQYTRYLT 121
Query: 260 LGFAILEAV-IVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 311
+G AIL++ ++A + I+ S + ++ ++ G + W+ + I+
Sbjct: 122 IGLAILQSTGLIAVARITGRIFPNCSLPIIPDTSWQRIITMIAVMTAGTSVIMWLGELIT 181
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
+ G G G S++I I + L+ + Q + W L ++ V ++ V V
Sbjct: 182 DRGVGNGMSILIFTSIAASFPGQLWSIKLQ------KGWFAFLFIMAVGVLIVAAVVFVE 235
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+ R++ +QY ++ R+ T YIP +N SG+ PV+ + LL PS++ +
Sbjct: 236 QAQRRIPVQYAKRQV---GRQQYGGTST--YIPIKVNQSGVIPVIFASSLLYIPSLIVNF 290
Query: 432 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GS Q + V + Y +YA + F F
Sbjct: 291 SGS---QAAWATWISKNLVSGDNFFYIGVYALLIVFFTYF 327
>gi|330718953|ref|ZP_08313553.1| preprotein translocase subunit SecY [Leuconostoc fallax KCTC 3537]
Length = 444
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 148/298 (49%), Gaps = 29/298 (9%)
Query: 140 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSV 198
LS++ N E +IR++L T +++ + RIG I +PG D P + SG +
Sbjct: 2 LSTLFNAVREK----DIRKKLGWTFLILFVYRIGTHITVPGVD----PAALTNMANSGLM 53
Query: 199 DELGDF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYI 255
+ L F G + S F +G+SP + A I++Q+L IVP V+ K+G G K+ +
Sbjct: 54 NILNIFSGGGLMNYSLFAMGVSPYVTAQIVVQLLQLDIVPRFVEWSKQGEVGRRKLNNAT 113
Query: 256 WWISLGFAILEAV-IVACYSL--PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
W++L A +++V I A ++ Y + + ++S+ ++ ++ G M W+ + I+E
Sbjct: 114 RWLTLVLAFVQSVGITAGFNSLSAYGLVSQTNSLSSFVIIGSVMTIGTMFAVWLGEMITE 173
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWA 367
G G G S++I GI++ LY++ + + V W FM+ LL +V
Sbjct: 174 KGLGNGVSMVIFAGIISQVPSGLYELFKENILEASANEKVNGWVFMIVLLIAIVLVIAIV 233
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
E R++++QY SAA S E Y+P +N SG+ PV+ + ++ P
Sbjct: 234 TWFYEATRRLQMQY----TRSAAAYGS-----EAYLPLKVNVSGVIPVIFASSFISTP 282
>gi|320533212|ref|ZP_08033927.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
171 str. F0337]
gi|320134576|gb|EFW26809.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
171 str. F0337]
Length = 434
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 165/342 (48%), Gaps = 38/342 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIP----QDYLSFVSGSVDE 200
++F ++R +L T ++ + R+G +P PG + ++ I Q+ LS V+
Sbjct: 7 QAFRTPDLRAKLLFTLGIMALFRLGSILPAPGVNLANAKQCIAAAEDQNLLSLVN----- 61
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
+ GA L+LS F LGI P I ASI++Q+L ++P +L KEG G K+ Y ++++
Sbjct: 62 VFSGGALLQLSVFALGIMPYITASIIIQLLKVVIPRFEELHKEGQAGTAKLTEYTRYLTI 121
Query: 261 GFAILEAVIVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMS-----WICDT 309
G +L++ + + +++ A+ + + V A LL+ MT W+ +
Sbjct: 122 GLGLLQSSTIVATAKSGALFQGCDEKIATQIIPNDSVVALLLIVITMTAGTGLIMWLGEL 181
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G SL+I I+ + ++ + G++ F + ++ V + T+ V
Sbjct: 182 ITERGIGNGMSLLIFTSIVAQFPSNMFSIAGGNNGAA----NFAI-IVAVVLLATLAVVY 236
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
+ + R++ +QY K R+ T YIP IN +G+ PV+ + +LA P ++A
Sbjct: 237 IEQAQRRIPVQYA--KRMIGRRQYGGSTT---YIPVKINTAGVIPVIFASSILAMPQLVA 291
Query: 430 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
GSP V+ I +T + +Y T Y + F F
Sbjct: 292 G-FGSPTSTWVQWI---QTHLQQTHPIYLTAYGVLILFFAFF 329
>gi|262280205|ref|ZP_06057989.1| secretion protein [Acinetobacter calcoaceticus RUH2202]
gi|262257983|gb|EEY76717.1| secretion protein [Acinetobacter calcoaceticus RUH2202]
Length = 452
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 147/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFQANQGTI--LGLFNMFSGGA 78
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S ++ + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 383
I++G L ++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVSG----LPNLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 299
>gi|417927846|ref|ZP_12571234.1| preprotein translocase, SecY subunit [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|340765720|gb|EGR88246.1| preprotein translocase, SecY subunit [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
Length = 447
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 28 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 79
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 80 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 139
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 140 IGITAGFNTLSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 199
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + S ++ ++G +L V IV + V + K+ +
Sbjct: 200 GIISSIPNAIATIREDYFVNVKASDLQSSYLIVGILILAVLAIV-FFTTYVQQAEYKIPI 258
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + + P
Sbjct: 259 QYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDIP 309
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++EI N + VG +YA + LF+ F
Sbjct: 310 WLTRLQEIFNYQNPVG------MMVYAVLIILFSFF 339
>gi|406660173|ref|ZP_11068307.1| hypothetical protein B879_00307 [Cecembia lonarensis LW9]
gi|405556051|gb|EKB51020.1| hypothetical protein B879_00307 [Cecembia lonarensis LW9]
Length = 440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 29/325 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-LGDFGAELKLSFF 213
++R R+ T +V+ R+G FI LPG D + D + G +D LG GA S F
Sbjct: 16 DLRIRILNTIGFLVVFRLGSFIVLPGVDPSKL-GDAPEGIFGLIDTFLG--GAFSNASIF 72
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IVAC 272
LGI P I ASI++Q+L VP +L+KEG G ++I +++ + + + +
Sbjct: 73 GLGIMPYISASIVLQLLTVGVPYFQKLQKEGESGRKRINQITRVLTIAITVAQGIGYITA 132
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
LP S S+ + + LL G M W+ + I+E G G G S++I +GI++ +
Sbjct: 133 TILPTGAVMVSTSL-FMFSSLVLLSAGTMFCMWLGEKITEKGIGNGISMLIMIGIISRFP 191
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLAS 388
+ ++++L +L V V + V +TE R++ +QY G K+
Sbjct: 192 GAI---IAEVLSKGTSGMLLLLLEAAVLFFVVLGTVALTEATRRIPVQYAKQVVGGKVYG 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN--P 446
R+ YIP +N SG+ P++ L+ P+++A I W +I N
Sbjct: 249 GQRQ---------YIPIKVNASGVMPIIFAQSLMFLPALIAQI-----WSAENDIANYIG 294
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
T W Y ++A + LF F
Sbjct: 295 STFSDFTSWQYNLVFAIMIILFTFF 319
>gi|325663042|ref|ZP_08151492.1| preprotein translocase [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086649|ref|ZP_08335726.1| preprotein translocase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470496|gb|EGC73726.1| preprotein translocase [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409815|gb|EGG89250.1| preprotein translocase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 438
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 159/306 (51%), Gaps = 11/306 (3%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
++F ++IR+++F T +++V+ RIG +P PG D I + S + + F G+
Sbjct: 7 KAFQVADIRKKIFYTFMMLVVIRIGSQLPTPGVDPTYIQNFFESQTGEAFNFFNAFTGGS 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI + ++++ A++E
Sbjct: 67 FTQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIAAITRYVTVALALIE 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ +A + + V L G+ + WI + I+E G G G S+++ +
Sbjct: 127 STAMAV-GFGRQGLLVDFNFVNAAVVVVTLTAGSAFLMWIGERINEKGVGNGISIVLLIN 185
Query: 327 ILTGYTETLYKMLSQLL-GSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
I++ + + +Q + G S+ + +L + +V ++ +++ +G RK+ +QY
Sbjct: 186 IISRVPDDFVTLYNQFMKGKSLASAGLAAVIILAIILVVVVFVIILQDGQRKIAVQY--- 242
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEI 443
+ + + +IP +N +G+ PV+ + L+ FP ++AS LG + + EI
Sbjct: 243 --SQRIQGRRSVGGQSSFIPLKVNTAGVVPVIFASSLMQFPVVIASFLGKGNGKGIGSEI 300
Query: 444 LNPETS 449
L +S
Sbjct: 301 LKGLSS 306
>gi|406914136|gb|EKD53367.1| preprotein translocase subunit SecY [uncultured bacterium]
Length = 426
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 17/299 (5%)
Query: 149 ESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAE 207
+ FK ++R RL TA++I I R+ IP PG + + + S S+ ++ G
Sbjct: 9 RALFKIKDLRNRLIFTAIVIFIFRLVAHIPAPGINLTALKGLFDSSAFLSLLDIFSGGTL 68
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S LG++P I ASI+MQ+L +VP L +L+KEG G +KI Y +++ +
Sbjct: 69 TNFSIMALGLNPYINASIIMQMLGMVVPKLEELQKEGDYGRQKINQYTRLLTIPLCFFQG 128
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + + S +K + F L G + W+ + +++ G G G SLII VGI
Sbjct: 129 IALIMLLRGQGLTTTSDPLKLASIV-FTLAAGTAFLIWLGEQLNDYGVGNGISLIIFVGI 187
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKL 386
+T ++L+ + + + F + GVF I +++A+V V E R+V +Q
Sbjct: 188 VTRLPVAAAQVLTTIDPAQI----FTYLIFGVFAIASVYAIVRVGEAVREVPIQ------ 237
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSPFWQHVKE 442
SA R S + V ++P +N +G+ P++ + P++L+ + G P +
Sbjct: 238 -SARRGASFTSVVGNHLPLRLNQAGVIPIIFAVSFMLIPNLLSRVFAGSGQPILAQISR 295
>gi|343492614|ref|ZP_08730975.1| preprotein translocase subunit SecY [Vibrio nigripulchritudo ATCC
27043]
gi|342827064|gb|EGU61464.1| preprotein translocase subunit SecY [Vibrio nigripulchritudo ATCC
27043]
Length = 446
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 15/295 (5%)
Query: 146 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF- 204
+A+S R LFV L+V R G F+P+PG D ++ D G++ E+ +
Sbjct: 10 RSAQSGLAELKSRLLFVLGALLVF-RAGSFVPIPGIDAAVLA-DLFEQQKGTIVEMFNMF 67
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA + S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L
Sbjct: 68 SGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVL 127
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---LVCGAMTMSWICDTISESGFGQGS 319
A +A+ +A +LP + + M T LV G M + W+ + I+E G G G
Sbjct: 128 ATFQAIGIAT-ALPSMVTGQLVVIDQTMFTVIATISLVTGTMFLMWLGEQITERGIGNGI 186
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
SLII GI+ G + + + Q + +L + F ++ + V + G R++ +
Sbjct: 187 SLIIFAGIVAGLPSAIGQTIEQARQGELNVLLLLLIAVLAFAVI-YFVVFMERGQRRIVV 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
Y A + ++P IN +G+ P + + ++ FP LA G+
Sbjct: 246 NY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGN 295
>gi|126176335|ref|YP_001052484.1| preprotein translocase subunit SecY [Shewanella baltica OS155]
gi|152998769|ref|YP_001364450.1| preprotein translocase subunit SecY [Shewanella baltica OS185]
gi|160873346|ref|YP_001552662.1| preprotein translocase subunit SecY [Shewanella baltica OS195]
gi|217975181|ref|YP_002359932.1| preprotein translocase subunit SecY [Shewanella baltica OS223]
gi|373951436|ref|ZP_09611397.1| preprotein translocase, SecY subunit [Shewanella baltica OS183]
gi|378706584|ref|YP_005271478.1| preprotein translocase subunit SecY [Shewanella baltica OS678]
gi|386322744|ref|YP_006018861.1| preprotein translocase subunit SecY [Shewanella baltica BA175]
gi|386343087|ref|YP_006039453.1| preprotein translocase subunit SecY [Shewanella baltica OS117]
gi|418025021|ref|ZP_12664001.1| preprotein translocase, SecY subunit [Shewanella baltica OS625]
gi|125999540|gb|ABN63615.1| protein translocase subunit secY/sec61 alpha [Shewanella baltica
OS155]
gi|151363387|gb|ABS06387.1| preprotein translocase, SecY subunit [Shewanella baltica OS185]
gi|160858868|gb|ABX47402.1| preprotein translocase, SecY subunit [Shewanella baltica OS195]
gi|217500316|gb|ACK48509.1| preprotein translocase, SecY subunit [Shewanella baltica OS223]
gi|315265573|gb|ADT92426.1| preprotein translocase, SecY subunit [Shewanella baltica OS678]
gi|333816889|gb|AEG09555.1| preprotein translocase, SecY subunit [Shewanella baltica BA175]
gi|334865488|gb|AEH15959.1| preprotein translocase, SecY subunit [Shewanella baltica OS117]
gi|353535434|gb|EHC04996.1| preprotein translocase, SecY subunit [Shewanella baltica OS625]
gi|373888036|gb|EHQ16928.1| preprotein translocase, SecY subunit [Shewanella baltica OS183]
Length = 446
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + G++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QKGTI--LGMFNMFSGGALS 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y W +L ++V
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSV 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + +L + VF VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFA-VTYFVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|19704945|ref|NP_602440.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329200|ref|ZP_06871701.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19712847|gb|AAL93739.1| Protein translocase subunit secY [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153556|gb|EFG94373.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 426
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 158/323 (48%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGTG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
I E + +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 ----KGGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|453366342|dbj|GAC78117.1| preprotein translocase SecY subunit [Gordonia malaquae NBRC 108250]
Length = 443
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 159/346 (45%), Gaps = 42/346 (12%)
Query: 150 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF----- 204
+F ++R+++F ++V+ R+G +P PG + + I + + G ++
Sbjct: 8 TFRTPDLRKKIFYVLGILVLYRLGTTMPSPGVNFKEIDRCVEAASRGDSGQIYSLINMFS 67
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y +++L A
Sbjct: 68 GGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQNKMTQYTRYLTLALA 127
Query: 264 ILEAVIVACYSLPYSIYAAS------------HSVKHVMVTAFLLVCGAMTMSWICDTIS 311
+L++ + + ++ ++ S+ +++ ++ GAM + W + I+
Sbjct: 128 VLQSTGIVALAASGNLLPSTGPDCNSQDIISDRSIFGLVIIIMVMTAGAMLVMWFGELIT 187
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-V 370
E G G G SL+I GI+ +L+ G GL+ V ++ + AVV +
Sbjct: 188 ERGVGNGMSLMIFAGIVARLPSEGRNILNSSGG-------LRFGLVCVAILIILIAVVFI 240
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-- 428
+G R++ +QY + S Y+P +N +G+ PV+ + LL P ++
Sbjct: 241 EQGMRRIPVQYAKRMVGRKMYGGS-----STYMPIKVNTAGVIPVIFASSLLYIPQLILQ 295
Query: 429 ------ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ G W ++NP + Y+ + FF + +
Sbjct: 296 LTNQNSTEVAGWQVWMQ-DNLINPSSVF--HIVTYFLLIVFFTYFY 338
>gi|56460996|ref|YP_156277.1| preprotein translocase subunit SecY [Idiomarina loihiensis L2TR]
gi|56180006|gb|AAV82728.1| Preprotein translocase subunit SecY [Idiomarina loihiensis L2TR]
Length = 442
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 149/329 (45%), Gaps = 25/329 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
SE++RRL I++ R G F+P+PG D ++ Q + V F GA + S
Sbjct: 16 SELKRRLLFVLGAIIVFRAGSFVPIPGIDAAVLAQLFEQQKDTIVAMFNMFSGGALERAS 75
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+ + P L +L+KEG G KI Y W +L A +++ +A
Sbjct: 76 VFALGIMPYISASIIMQLASVVHPRLAELKKEGESGRRKINQYTRWGTLILATFQSIGIA 135
Query: 272 C---YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+P + V + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 136 TGLPNLMPGLVIDPGFGFYFTAVVS--LVTGTMFLMWLGEQITERGIGNGISILIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + Q + +L + V VT + V V G R++ + Y A
Sbjct: 194 AGLPSAIGQTAEQARQGDLHLLLLLL-IGVVVLAVTYFVVFVERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------PFWQHVKE 442
+ ++P +N +G+ P + + ++ FP +A+ GS F Q V
Sbjct: 248 RQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIATWFGSGEGMVADFLQQVSM 307
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P +P +Y +YA + F F
Sbjct: 308 TLSP-----GQP-LYVLLYAAAIIFFCFF 330
>gi|408400809|ref|YP_006858772.1| protein translocase [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967037|dbj|BAM60275.1| protein translocase [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 447
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 28 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 79
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 80 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 139
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 140 IGITAGFNTLSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 199
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + S ++ ++G +L V IV + V + K+ +
Sbjct: 200 GIISSIPNAIATIREDYFVNVKASDLQSSYLIVGILILAVLAIV-FFTTYVQQAEYKIPI 258
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + + P
Sbjct: 259 QYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDIP 309
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++EI N + VG +YA + LF+ F
Sbjct: 310 WLTRLQEIFNYQNPVG------MMVYAVLIILFSFF 339
>gi|269128496|ref|YP_003301866.1| preprotein translocase subunit SecY [Thermomonospora curvata DSM
43183]
gi|268313454|gb|ACY99828.1| preprotein translocase, SecY subunit [Thermomonospora curvata DSM
43183]
Length = 432
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 33/340 (9%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R++L T +IVI RIG +P P + I + S G ++
Sbjct: 1 MLTAIVRAFRTPDLRKKLLFTLFIIVIFRIGSQLPTPNVNTEAIREAVESAREGDQSQIY 60
Query: 203 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
GA L+LS F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 GLVDLFSGGALLQLSVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTNKITQYTR 120
Query: 257 WISLGFAILEAVIVACYSLPYSIY--AASHSVKH------VMVTAFLLVCGAMTMSWICD 308
++++G AIL+A + + +++ AA V + ++ ++ G + W+ +
Sbjct: 121 YLTIGLAILQATGIVAMAATGNLFQGAAVGDVLYKTDLFSIITMVVVMTAGTSVIMWLGE 180
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S++I +T+ + +Q F L+ V + M V
Sbjct: 181 LITDRGIGNGMSILI-------FTQVVAVFPAQFWAIYTSKGAFAFALVLVVGLAIMAGV 233
Query: 369 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V V + R++ +QY A YIP +N +G+ PV+ + LL P
Sbjct: 234 VFVEQAQRRIPVQY-----AKRMVGRRMYGGTSTYIPLKVNQAGIIPVIFASSLLYLP-- 286
Query: 428 LASILGSPFWQHVKEILNPETSVGA-RPWVYYTIYAFFVF 466
+L + W K ++ + + PW + F +F
Sbjct: 287 ---VLATQLWPENKWMIKLQPYLQQDNPWHMAVFFGFIIF 323
>gi|451823422|ref|YP_007459696.1| preprotein translocase subunit SecY [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451776222|gb|AGF47263.1| preprotein translocase subunit SecY [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 435
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 162/342 (47%), Gaps = 30/342 (8%)
Query: 139 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 198
+SS+ NN S FK RR LF+ LIV RIG IP+PG D + + + + G V
Sbjct: 4 EISSLANNLGSSDFK---RRSLFLVLALIVY-RIGTHIPVPGVDPYALAELFNNNQGGIV 59
Query: 199 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
F GA + S F LGI P I ASI++Q+L ++PSL L+KEG G KI Y
Sbjct: 60 SLFNMFSGGALSRFSIFALGIMPYISASIVVQLLSVVIPSLESLKKEGEAGRRKISRYTR 119
Query: 257 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 316
++++ A++++ V+ S+ + V L+ G M + W+ + I+E G G
Sbjct: 120 YVTVLVALIQSFGVSLVLESQHDLIISNGMFPHFVRILTLITGTMFVMWLGEQITERGLG 179
Query: 317 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE---- 372
G S+II GI++ L+ +L + +S + L+ F I+ + V
Sbjct: 180 NGISMIIFAGIVSELPGALFALLEMVRFNS-------MSLIAAFFIIAVVFTVTFLVVFV 232
Query: 373 --GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G RK+ + Y ++ + ++P +N SG+ P + + L+ P+ +AS
Sbjct: 233 EMGQRKIVVNYAQRQVGNKIYRGQ-----NSHLPLKLNMSGVIPPIFASSLMLLPATIAS 287
Query: 431 I---LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ S W + V E L+P + ++Y + FF F +
Sbjct: 288 WFSGVDSMNWLNVVAENLSPRQPLYV--FLYSVLIVFFCFFY 327
>gi|410030854|ref|ZP_11280684.1| preprotein translocase subunit SecY [Marinilabilia sp. AK2]
Length = 440
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 29/325 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-LGDFGAELKLSFF 213
++R R+ T +V+ R+G FI LPG D + D + G +D LG GA S F
Sbjct: 16 DLRIRILNTIGFLVVFRLGSFIVLPGVDPSKL-GDAPEGIFGLIDTFLG--GAFSNASIF 72
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IVAC 272
LGI P I ASI++Q+L VP +L+KEG G ++I +++ + + + +
Sbjct: 73 GLGIMPYISASIVLQLLTVGVPYFQKLQKEGESGRKRINQITRVLTIAITVAQGIGYITA 132
Query: 273 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 332
LP S S+ + + LL G M W+ + I+E G G G S++I +GI++ +
Sbjct: 133 TILPTGAVMVSTSL-FMFSSLVLLSAGTMFCMWLGEKITEKGIGNGISMLIMIGIISRFP 191
Query: 333 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLAS 388
+ ++++L +L V V + V +TE R++ +QY G K+
Sbjct: 192 GAI---IAEVLSKGTSGMLLLLLEAAVLFFVVLGTVALTEATRRIPVQYAKQVVGGKVYG 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN--P 446
R+ YIP +N SG+ P++ L+ P+++A I W +I N
Sbjct: 249 GQRQ---------YIPIKVNASGVMPIIFAQSLMFLPALIAQI-----WSAENDIANYIG 294
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
T W Y ++A + LF F
Sbjct: 295 STFSDFTSWQYNLVFAIMIILFTFF 319
>gi|387928090|ref|ZP_10130768.1| preprotein translocase subunit SecY [Bacillus methanolicus PB1]
gi|387587676|gb|EIJ79998.1| preprotein translocase subunit SecY [Bacillus methanolicus PB1]
Length = 431
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 26/295 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGAELKLSF 212
EIRR++ T ++++ RIG FIP+P + ++ QD L+ V G ++ G GA S
Sbjct: 12 GEIRRKILFTLFMLIVFRIGAFIPVPNVNAEILKVQDELN-VFGVLNTFGG-GALKNFSI 69
Query: 213 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+L +VP + K+G G K+ + + ++ +++A
Sbjct: 70 FAMGIMPYITASIIVQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGLIQA---- 125
Query: 272 CYSLPYSIYAASHS--VKHVMVTAFLLVC-----GAMTMSWICDTISESGFGQGSSLIIC 324
+ + Y S +K+ +T +LL+ G + W+ + I+ G G G S+II
Sbjct: 126 -FGMSYGFNNMSRGMLIKNPGITTYLLIAIVLTAGTAFLMWLGEQITAKGVGNGISIIIF 184
Query: 325 VGILTGYTETLYKMLSQLLGSS-----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GI+ G T ++ +Q ++ +R +L +L V I+ + + + + RK+ +
Sbjct: 185 AGIVAGIPSTFNQIYAQQFENAGEQLFLRIIIVVLIVLAVIAII-VGVIFIQQALRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
QY K +A R +P ++P +N +G+ PV+ + P +AS G
Sbjct: 244 QYA--KRMAAGR--NPAVGQSTHLPLKVNSAGVIPVIFAVSFIVTPPTIASFFGQ 294
>gi|331004141|ref|ZP_08327621.1| preprotein translocase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330411551|gb|EGG90961.1| preprotein translocase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 438
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 153/309 (49%), Gaps = 16/309 (5%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F ++R++L T +++VI R G +P+PG + +D+ + SG D G
Sbjct: 1 MLTTLRNAFKVKDVRKKLLYTFIMLVIIRFGSNLPIPGVNTTFF-KDFFAKQSG--DAFG 57
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
F G+ LS L I+P I +SI++Q+L +P+L +L+++G DG +KI Y +
Sbjct: 58 FFNAITGGSFESLSVLALSITPYITSSIIIQLLTIAIPALEELQQDGEDGRKKIVEYTRY 117
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+++ A+L++ +A +S+K V+VT + G+ + WI + I+E G G
Sbjct: 118 LTIALALLQSSAMAI-GFGKQNLLIHYSLKSVIVTVVTMTAGSAFLMWIGERITEKGIGN 176
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G S+++ + IL+ + + L + R ++ ++ ++ +++ + R
Sbjct: 177 GISIVLLLNILSSLPSDFSNLYERFLKNQTVARMVVAAAIIIAFIIVMVIFTIILQDAER 236
Query: 376 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
++ +QY +S + + +IP +N +G+ PV+ + L + P ++ L
Sbjct: 237 RIPVQY-----SSKMQGRRSVGGTSSHIPLKVNTAGVIPVIFASSLFSTPIVIGQFLQIN 291
Query: 436 FWQHVKEIL 444
+ EIL
Sbjct: 292 NGSIIGEIL 300
>gi|227879263|ref|ZP_03997133.1| preprotein translocase subunit SecY [Lactobacillus crispatus
JV-V01]
gi|256849163|ref|ZP_05554596.1| translocase [Lactobacillus crispatus MV-1A-US]
gi|295692180|ref|YP_003600790.1| preprotein translocase secy subunit [Lactobacillus crispatus ST1]
gi|227861157|gb|EEJ68806.1| preprotein translocase subunit SecY [Lactobacillus crispatus
JV-V01]
gi|256713939|gb|EEU28927.1| translocase [Lactobacillus crispatus MV-1A-US]
gi|295030286|emb|CBL49765.1| Preprotein translocase secY subunit [Lactobacillus crispatus ST1]
Length = 431
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 164/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +L+ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKLYFTLFILLLYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFIQSIGITLGFNALTQMGLVKNQTPQTYIEIAIVMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ L+++ + + +S RW F + ++ IVT + V +
Sbjct: 179 ISVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQFVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + ++ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATMSGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q +++N S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFF 326
>gi|170289163|ref|YP_001739401.1| preprotein translocase subunit SecY [Thermotoga sp. RQ2]
gi|170176666|gb|ACB09718.1| preprotein translocase, SecY subunit [Thermotoga sp. RQ2]
Length = 431
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 162/335 (48%), Gaps = 33/335 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 200
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G K Y ++L
Sbjct: 67 FTG-GALSQFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRRKFAKYTRRLTL 125
Query: 261 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+A V+ S P I + ++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMIAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G S++I GI+ Y + + + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPSYIRR--AYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
V +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 VTIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +K + A ++Y IY VF F F
Sbjct: 293 -ETLKSLFR------AGGFLYLLIYGLLVFFFTYF 320
>gi|398784950|ref|ZP_10548071.1| preprotein translocase subunit SecY [Streptomyces auratus AGR0001]
gi|396994840|gb|EJJ05867.1| preprotein translocase subunit SecY [Streptomyces auratus AGR0001]
Length = 437
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 22/301 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-----SVDELG 202
A +F ++R++L T +IV+ RIG +P+PG + + + + G ++ +
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVLYRIGAHVPVPGVNYANV-ETCMKQAGGNSGLFALVNMF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQYTRYLTVAL 124
Query: 263 AILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISES 313
AIL+ + + +++ + S S+ + + G + W+ + +++
Sbjct: 125 AILQGTGLVATARSGALFQSCPVASEIVPSDSIFTTITMVITMTAGTGLIMWLGELVTDR 184
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S+++ + I G+ L+++ +L G W ++ V + V V +
Sbjct: 185 GIGNGMSILMFISIAAGFPGALWQI--KLTGKLADGWIEFFAVIAVGLAMVALVVFVEQA 242
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY + + + YIP +N +G+ PV+ + LL P+++A G
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALVAQFSG 297
Query: 434 S 434
S
Sbjct: 298 S 298
>gi|393778228|ref|ZP_10366508.1| preprotein translocase, membrane component, transport across inner
membrane [Ralstonia sp. PBA]
gi|392714782|gb|EIZ02376.1| preprotein translocase, membrane component, transport across inner
membrane [Ralstonia sp. PBA]
Length = 448
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 12/293 (4%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
+ L A + ++RRRL + +++ RIG IP+PG D + Q + S G +
Sbjct: 7 NALAQAKNTAKYGDLRRRLVFLVLALIVYRIGAHIPVPGIDPDQLAQLFQSQSGGILGMF 66
Query: 202 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F GA + + F LGI P I ASI+MQ+L +VP L L+KEG G KI Y + +
Sbjct: 67 NLFSGGALSRFTIFALGIMPYISASIIMQLLAIVVPQLEALKKEGQAGQRKITQYTRYGT 126
Query: 260 LGFAILEA--VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
L A+ +A + VA S P + + M LV G M + W+ + I+E G G
Sbjct: 127 LVLALFQAFGIAVALESQPGLVL--DPGLMFRMTAVVTLVTGTMFLMWLGEQITERGLGN 184
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 377
G SLII GI G + + +L+ + + ++ + VT V + G R++
Sbjct: 185 GISLIIFAGIAAGLPNAIGGLF-ELVRTGAMSIISAIIIVAIVIAVTYLVVFIERGQRRI 243
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ Y ++ + ++P +N +G+ P + + ++ FP+ +A
Sbjct: 244 LVNYAKRQVGNKVYGGQ-----SSHLPLKLNMAGVIPPIFASSIILFPATIAG 291
>gi|183221328|ref|YP_001839324.1| preprotein translocase subunit SecY [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911420|ref|YP_001962975.1| preprotein translocase subunit SecY [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776096|gb|ABZ94397.1| Preprotein translocase, SecY subunit [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779750|gb|ABZ98048.1| Preprotein translocase SecY subunit; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 459
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 161/348 (46%), Gaps = 38/348 (10%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL---IPQDYLSFVSGSVDELGDF 204
A F E+R ++ T ++++ R+G + +PG + + I D G VD
Sbjct: 6 ANIFRIPELRSKILFTIGMLLLFRMGTHVTIPGINSLIVTGITADPSEGFLGMVDLFAG- 64
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA LK S F LGI P I +SI+MQ++ ++PSL +++KEG +G +KI+ Y + +L
Sbjct: 65 GALLKFSIFALGIMPYISSSIIMQLVMVLIPSLQKMQKEGEEGRKKIQQYTKYGTLILCA 124
Query: 265 LEAVIVACYSLPYSIYAASHSVKH------------VMVTAFLLVCGAMTMSWICDTISE 312
++++ V + +S + + K+ + + + G + + W+ + I+E
Sbjct: 125 IQSLAVIQLANSWSTGSGNAQAKYPGLINPSVEGYFLPIAMLSITTGTVLLIWLGEQITE 184
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G SLII GI+ E L M + S +L L+ +F ++ V++T+
Sbjct: 185 RGIGNGISLIIFAGIIGRMPEALIAMFT----SDTSDALSILILIIIFIVLISLTVILTQ 240
Query: 373 GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
G R+V L Y G K+ A + IPF +N + + P++ + L+ FP +
Sbjct: 241 GVRRVPLNYGKQMVGRKMVQARSQS---------IPFKVNSANVMPIIFASSLILFPQTI 291
Query: 429 ASILGS-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L S W + + NP + + YY IY + F F
Sbjct: 292 VQWLSSKGGQWAGWAVIMDYFNPFSQIWYHALFYYVIYTSLIIFFAYF 339
>gi|340349857|ref|ZP_08672860.1| preprotein translocase subunit SecY [Prevotella nigrescens ATCC
33563]
gi|339610060|gb|EGQ14921.1| preprotein translocase subunit SecY [Prevotella nigrescens ATCC
33563]
Length = 447
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 49/339 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
++R+RL VT + I R G FI LPG + L+ + S +G + L D GA K S
Sbjct: 16 DLRKRLLVTILFTAIYRFGSFIVLPGINPGLL-EKLQSQTAGGLMSLLDMFSGGAFSKAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+L VP ++++EG GH+KI Y +++ + +A
Sbjct: 75 IFALGIMPYISASIVMQLLAVAVPYFQKMQREGESGHKKINWYTRVLTIVILLFQA---P 131
Query: 272 CYSLPYSIYAASHSVKHV-----MVTA-FLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
Y + AA V MV+A +L G+M + W+ + I++ G G G S+II V
Sbjct: 132 AYLINLKTQAAGALATGVNWTLFMVSASIILAAGSMFILWLGERITDKGVGNGVSIIIMV 191
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-------VTMWAVVVTEGCRKVK 378
GI+ + ++ +S R+ G L +F + V A+++T+G RK+
Sbjct: 192 GIIARLPQAFFQEVSS------RFTAITSGGLVMFIVEIIILYLVVCAAILLTQGTRKIP 245
Query: 379 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY G K AR+ YIP + + + P++ L+ P LA +
Sbjct: 246 VQYAKKVVGNKQYGGARQ---------YIPLKLFAANVMPIIFAQALMFIP--LAIV--- 291
Query: 435 PFWQHVKEILNP--ETSVGARPWVYYTIYAFFVFLFNIF 471
Q+ + +P ++ + + +Y TIY + F F
Sbjct: 292 ---QYSTDSASPILQSLMDTKSLLYNTIYVILIVAFTYF 327
>gi|150020865|ref|YP_001306219.1| preprotein translocase subunit SecY [Thermosipho melanesiensis
BI429]
gi|149793386|gb|ABR30834.1| preprotein translocase, SecY subunit [Thermosipho melanesiensis
BI429]
Length = 428
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 158/332 (47%), Gaps = 42/332 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
E+R R+ T +++++ R+G +IP+PG + + + +G+ L F GA
Sbjct: 13 ELRDRIVFTLLMLIVFRLGIYIPVPGVNLKAWGTAFSQMGTGAAGGLLSFYDVFTGGAFR 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F + ++P I ASI++Q+L ++PSL +L KEG +G +K + +++ L+
Sbjct: 73 RFSIFAMSVTPYINASIILQLLSSVIPSLKELLKEGEEGRKKFQRITRNLTVILGALQGF 132
Query: 269 IVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMSWICDTISESGFGQGS 319
+V+ + + S ++V+V + L+ G M + WI D I+E G G G
Sbjct: 133 VVS--------FGLARSFENVLVIPLWTFTLLSTITLLAGTMFLLWIGDRITEKGIGNGI 184
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
S++I GI+ Y Y + L G ++ W F LLGV ++ + + V + R++ +
Sbjct: 185 SVLIFAGIVARYPA--YFRTAVLGGLNIFEWIF---LLGVMFLMVIGIIYVQQAERRIVV 239
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
QY AS +IP +N SG+ P++ +++ P +A S +
Sbjct: 240 QY-----ASRMVGRRIYGGTSTHIPIKVNHSGVIPIIFGWAIVSIPVGIAQFTNSQTLKS 294
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + +P + TIYA +F F F
Sbjct: 295 LFSMTSP---------LIITIYAVLIFFFTYF 317
>gi|15644228|ref|NP_229280.1| preprotein translocase subunit SecY [Thermotoga maritima MSB8]
gi|418045538|ref|ZP_12683633.1| preprotein translocase, SecY subunit [Thermotoga maritima MSB8]
gi|81789631|sp|Q9X1I9.1|SECY_THEMA RecName: Full=Protein translocase subunit SecY
gi|209156622|pdb|3DIN|C Chain C, Crystal Structure Of The Protein-Translocation Complex
Formed By The Secy Channel And The Seca Atpase
gi|209156626|pdb|3DIN|F Chain F, Crystal Structure Of The Protein-Translocation Complex
Formed By The Secy Channel And The Seca Atpase
gi|4982044|gb|AAD36546.1|AE001798_11 preprotein translocase SecY subunit [Thermotoga maritima MSB8]
gi|351676423|gb|EHA59576.1| preprotein translocase, SecY subunit [Thermotoga maritima MSB8]
Length = 431
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 162/335 (48%), Gaps = 33/335 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 200
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTL 125
Query: 261 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+A V+ S P + + ++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G S++I GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +K + A ++Y IY VF F F
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYF 320
>gi|256846047|ref|ZP_05551505.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_36A2]
gi|294784822|ref|ZP_06750110.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_27]
gi|256719606|gb|EEU33161.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_36A2]
gi|294486536|gb|EFG33898.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_27]
Length = 426
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 156/323 (48%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 209
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ A+++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAVIQGTG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
+ +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGE-----KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|445113468|ref|ZP_21377591.1| preprotein translocase, SecY subunit [Prevotella nigrescens F0103]
gi|444841123|gb|ELX68142.1| preprotein translocase, SecY subunit [Prevotella nigrescens F0103]
Length = 446
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 49/339 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
++R+RL VT + I R G FI LPG + L+ + S +G + L D GA K S
Sbjct: 16 DLRKRLLVTILFTAIYRFGSFIVLPGINPGLL-EKLQSQTAGGLMSLLDMFSGGAFSKAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+L VP ++++EG GH+KI Y +++ + +A
Sbjct: 75 IFALGIMPYISASIVMQLLAVAVPYFQKMQREGESGHKKINWYTRVLTIVILLFQA---P 131
Query: 272 CYSLPYSIYAASHSVKHV-----MVTA-FLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
Y + AA V MV+A +L G+M + W+ + I++ G G G S+II V
Sbjct: 132 AYLINLKTQAAGALATGVNWTLFMVSASIILAAGSMFILWLGERITDKGVGNGVSIIIMV 191
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-------VTMWAVVVTEGCRKVK 378
GI+ + ++ +S R+ G L +F + V A+++T+G RK+
Sbjct: 192 GIIARLPQAFFQEVSS------RFTAITSGGLVMFIVEIIILYLVVCAAILLTQGTRKIP 245
Query: 379 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+QY G K AR+ YIP + + + P++ L+ P LA +
Sbjct: 246 VQYAKKVVGNKQYGGARQ---------YIPLKLFAANVMPIIFAQALMFIP--LAIV--- 291
Query: 435 PFWQHVKEILNP--ETSVGARPWVYYTIYAFFVFLFNIF 471
Q+ + +P ++ + + +Y TIY + F F
Sbjct: 292 ---QYSTDSASPILQSLMDTKSLLYNTIYVILIVAFTYF 327
>gi|113968564|ref|YP_732357.1| preprotein translocase subunit SecY [Shewanella sp. MR-4]
gi|114045727|ref|YP_736277.1| preprotein translocase subunit SecY [Shewanella sp. MR-7]
gi|117918677|ref|YP_867869.1| preprotein translocase subunit SecY [Shewanella sp. ANA-3]
gi|113883248|gb|ABI37300.1| protein translocase subunit secY/sec61 alpha [Shewanella sp. MR-4]
gi|113887169|gb|ABI41220.1| protein translocase subunit secY/sec61 alpha [Shewanella sp. MR-7]
gi|117611009|gb|ABK46463.1| protein translocase subunit secY/sec61 alpha [Shewanella sp. ANA-3]
Length = 446
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 208
SE++ RL I++ R G F+P+PG D ++ + + G++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QKGTI--LGMFNMFSGGALS 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G +KI Y W +L +++
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSI 132
Query: 269 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ G + + Q + +L + +F VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIIFA-VTYFVVFVERGQRRIVVNY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 246 AKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQ 293
>gi|392330412|ref|ZP_10275027.1| preprotein translocase subunit SecY [Streptococcus canis FSL
Z3-227]
gi|391418091|gb|EIQ80903.1| preprotein translocase subunit SecY [Streptococcus canis FSL
Z3-227]
Length = 434
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 164/336 (48%), Gaps = 44/336 (13%)
Query: 156 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 208
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 209 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQS 126
Query: 268 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
+ I A ++ S+ + VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVKTPDVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 326 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 379
GI++ + + + S ++ ++G +L V IV + V + K+ +
Sbjct: 187 GIISSIPNAIATIREDYFVNVKASDLQSSYLIVGILILAVLAIV-FFTTYVQQAEYKIPI 245
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 435
QY KL A S Y+P +NP+G+ PV+ + + PS + + + P
Sbjct: 246 QYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDIP 296
Query: 436 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ++E+ N ++ VG +YA + LF+ F
Sbjct: 297 WLTRLQELFNYQSPVG------MMVYALLIILFSFF 326
>gi|389807447|ref|ZP_10204117.1| preprotein translocase subunit SecY [Rhodanobacter thiooxydans
LCS2]
gi|388444070|gb|EIM00191.1| preprotein translocase subunit SecY [Rhodanobacter thiooxydans
LCS2]
Length = 440
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 38/350 (10%)
Query: 140 LSSVLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS- 197
+++ NA K +E+R+R+F +V+ R+G FIP+PG + P+ + V+G+
Sbjct: 1 MAAAKGNALGKLGKLTELRQRIFFVIGALVVFRLGSFIPVPGVN----PEAMTNLVNGNG 56
Query: 198 -VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
+D F GA + S F LG+ P I ASI+ Q++ +VPSL LRKEG G K+ Y
Sbjct: 57 LMDMFNMFSGGALERFSVFALGVIPYISASIVFQMMGAVVPSLQSLRKEGEAGKRKMTMY 116
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFL------LVCGAMTMSWICD 308
+ ++ A ++ +A +L + A V + F+ L G M + W+ +
Sbjct: 117 TRYATVALAAFQSFGIAV-ALQGQVAAGGAPVVYTPGFGFIFSSVVGLTAGTMFLMWLGE 175
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI---VTM 365
++E G G G SL+I GI+ G L + LG + ++ LL VF + VT
Sbjct: 176 QMTERGIGNGISLLIFAGIVAG----LPGAVVHTLGMASNGELSLIKLLMVFALALGVTA 231
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+ V + R++ + Y A + +P IN SG+ P + + LL FP
Sbjct: 232 FVVFMERAQRRITVNY-----ARRSGGQKAYMNQSSNLPLKINMSGVIPPIFASSLLMFP 286
Query: 426 SILASILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S S + Q + + L+P +Y T+++ V F F
Sbjct: 287 ATAVSWFSTGQQSRWLQDLTQALSPGNP------LYETVFSVLVIGFAFF 330
>gi|415886259|ref|ZP_11548082.1| preprotein translocase subunit SecY [Bacillus methanolicus MGA3]
gi|387588912|gb|EIJ81233.1| preprotein translocase subunit SecY [Bacillus methanolicus MGA3]
Length = 431
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 145/295 (49%), Gaps = 26/295 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGAELKLSF 212
EIRR++ T +++++ RIG FIP+P + ++ QD L+ V G ++ G GA S
Sbjct: 12 GEIRRKIIFTLLMLIVFRIGAFIPVPNVNAEVLKVQDQLN-VFGVLNTFGG-GALKNFSI 69
Query: 213 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F +GI P I ASI++Q+L +VP + K+G G K+ + + ++ +++A
Sbjct: 70 FAMGIMPYITASIIVQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGLIQA---- 125
Query: 272 CYSLPYSIYAASHSVKHV-------MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+ + Y S + V ++ A +L G + W+ + I+ G G G S+II
Sbjct: 126 -FGMSYGFNNMSRGMLIVDPGISTYLLIAIVLTAGTAFLMWLGEQITAKGVGNGISIIIF 184
Query: 325 VGILTGYTETLYKMLSQLLGSS-----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GI+ G T ++ +Q L +S +R +L +L V ++ + + + + RK+ +
Sbjct: 185 AGIVAGIPSTFNQIYAQQLENSGEQLFLRIITVVLIVLAVIALI-VGVIFIQQALRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
QY +A +P+ ++P +N +G+ PV+ + P +AS G
Sbjct: 244 QYANRMVAG----RNPVGGQSTHLPLKVNSAGVIPVIFAVSFIVTPPTIASFFGQ 294
>gi|238928135|ref|ZP_04659895.1| preprotein translocase subunit SecY [Selenomonas flueggei ATCC
43531]
gi|238884095|gb|EEQ47733.1| preprotein translocase subunit SecY [Selenomonas flueggei ATCC
43531]
Length = 418
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 147/287 (51%), Gaps = 21/287 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F G++ L D GA K S
Sbjct: 13 ELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFSQGTLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I A+I++Q+L +VP+L Q KEG +GH+K ++++ A +A+
Sbjct: 70 VFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLTVVLAFFQAI--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + + ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ + +L+ + ++ ++ F G++ + IV + + + G R++ + Y A
Sbjct: 187 PKNIGTILAYVKAGTISYFSVFAFGVIALAMIV--FVIHIETGFRRIPITY-------AK 237
Query: 391 REDSPITEV--EPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
R T + +IPF +N +G+ P++ + +L FP +A + P
Sbjct: 238 RVVGGRTAMGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFVDIP 284
>gi|118473505|ref|YP_885865.1| preprotein translocase subunit SecY [Mycobacterium smegmatis str.
MC2 155]
gi|399985867|ref|YP_006566215.1| preprotein translocase subunit secY [Mycobacterium smegmatis str.
MC2 155]
gi|441204891|ref|ZP_20972347.1| preprotein translocase, SecY subunit [Mycobacterium smegmatis MKD8]
gi|118174792|gb|ABK75688.1| preprotein translocase, SecY subunit [Mycobacterium smegmatis str.
MC2 155]
gi|399230427|gb|AFP37920.1| Preprotein translocase subunit secY [Mycobacterium smegmatis str.
MC2 155]
gi|440629357|gb|ELQ91147.1| preprotein translocase, SecY subunit [Mycobacterium smegmatis MKD8]
Length = 441
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 51/350 (14%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-------SVDEL 201
S +++RR++ T L+++ R+G IP PG + + Q ++ VSG S+ L
Sbjct: 7 SSLRTADLRRKILFTLGLVILYRVGASIPSPGVNYPNV-QQCIAQVSGGDSAQIYSLINL 65
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+L+ F +G+ P I ASI++Q+L ++P QLRKEG G K+ Y ++S+
Sbjct: 66 FSGGALLQLTVFAVGVMPYITASIIVQLLTVVIPRFEQLRKEGQAGQAKMTQYTRYLSIA 125
Query: 262 FAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
AIL+A + + + S+ ++V ++ GA + W+ + ++E G
Sbjct: 126 LAILQATSIVALAANGGLLQGCSLDIIQDSSIFGLIVIVLVMTAGAALVMWMGELVTERG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----- 369
G G SL+I GI +L G VFT V + A+V
Sbjct: 186 IGNGMSLLIFAGIAARIPAEGQTILESRGGV-------------VFTAVVIAALVIIIGV 232
Query: 370 --VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V +G R++ +QY A Y+P +N +G+ PV+ + L+ P +
Sbjct: 233 VFVEQGQRRIPVQY-----AKRMVGRKMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHL 287
Query: 428 LASIL-------GSPFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ ++ G+ +W + NP V VY+ + FF + +
Sbjct: 288 ITQLIQSGSSNPGTGWWDKFVADYLTNPADPV--YIAVYFGLIVFFTYFY 335
>gi|313123130|ref|YP_004033389.1| preprotein translocase subunit secy [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|312279693|gb|ADQ60412.1| Preprotein translocase subunit secY [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 431
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 164/343 (47%), Gaps = 32/343 (9%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +LF T ++VI R+G I +PG + + + + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKLFYTLFILVIYRLGANITVPGINAKALTTVANTGLVSVLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSVFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A +++V + S + + + + ++ G ++W+ D I++ G G G
Sbjct: 119 FVAFVQSVGITLGFNALSSFGLVKTQTWQTYFEIGMIMTAGTFLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLS-QLLGSSV--RWW--PFMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ LY++ Q++ +S RW F + L+ +VT + V +
Sbjct: 179 VSVIIFAGIIARLPGGLYQVFQDQVINNSASDRWQGVAFFVALIVAILLVTKFVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 G----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G + ++Q + I + +T+ GA IY + LF F
Sbjct: 290 GKYGDTTWYQVLSNIFSLQTTPGA------IIYTLLIILFTFF 326
>gi|429331918|ref|ZP_19212658.1| preprotein translocase subunit SecY [Pseudomonas putida CSV86]
gi|428763429|gb|EKX85604.1| preprotein translocase subunit SecY [Pseudomonas putida CSV86]
Length = 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 17/286 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGVNPDRLAELFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y ++++ A+++A
Sbjct: 74 MSVFALGIMPYISASIIMQLMTAVSPQLEQLKKEGESGRRKISQYTRYLTVILALVQATG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + ++A V V+ F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVAFSAGFGFHFVAVSTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARTGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
+ ++P +N +G+ P + + +L FP+ L S G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFG 290
>gi|16329923|ref|NP_440651.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803]
gi|383321666|ref|YP_005382519.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324835|ref|YP_005385688.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490719|ref|YP_005408395.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435986|ref|YP_005650710.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803]
gi|451814082|ref|YP_007450534.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|2500730|sp|P77964.1|SECY_SYNY3 RecName: Full=Protein translocase subunit SecY
gi|1652409|dbj|BAA17331.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|339273018|dbj|BAK49505.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|359270985|dbj|BAL28504.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274155|dbj|BAL31673.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277325|dbj|BAL34842.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957815|dbj|BAM51055.1| preprotein translocase subunit SecY [Bacillus subtilis BEST7613]
gi|451780051|gb|AGF51020.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
Length = 442
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 166/344 (48%), Gaps = 36/344 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + + +R RL +T L+++ R+G FIP+P DR+ Q +L+
Sbjct: 10 SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+G G + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTG--------GGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
Y +I+ G+ I++ + + L YA ++ + T + G+M + WI + I+E
Sbjct: 122 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I V I+ +TL + + + ++ L+ VF ++ + V V E
Sbjct: 180 RGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGIVFVQE 239
Query: 373 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 240 GTRRI-------PIISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAG 292
Query: 431 I-LGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF 471
G+ EI + S RP WVY +Y+ +F F+ F
Sbjct: 293 FATGNEGLGGFGEIF-VQISNALRPGTWVYTVVYSVMIFFFSYF 335
>gi|254502783|ref|ZP_05114934.1| preprotein translocase, SecY subunit [Labrenzia alexandrii DFL-11]
gi|222438854|gb|EEE45533.1| preprotein translocase, SecY subunit [Labrenzia alexandrii DFL-11]
Length = 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 150/300 (50%), Gaps = 21/300 (7%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L+S LN +A F K+E +++R++ T +++ R+G +IP+PG + Q + SG
Sbjct: 7 QLASNLNFSA--FAKAEELKKRIWFTLGALLVYRLGTYIPMPGINPEAFAQAFNQAQSGI 64
Query: 198 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 255
+ F GA +++ F LGI P I ASI+MQ++ +VPSL QL+KEG G + I Y
Sbjct: 65 IGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPSLEQLKKEGEQGRKVINQYT 124
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTI 310
+ ++ A +A Y + + A++ V T LV G M + W+ + I
Sbjct: 125 RYGTVVLAAFQA-----YGIAVGLEGATNVVTDPGWFFRASTVITLVGGTMFLMWLGEQI 179
Query: 311 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
+ G G G SLII GI+ G + + L +L +L ++ + +V + V +
Sbjct: 180 TSRGIGNGISLIIFAGIVAGLPSAIVQTL-ELGRQGSLATGIILAVILLAIVVIAFIVFM 238
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
R++ +QY ++ + E + ++P +N +G+ P + + LL P+ ++
Sbjct: 239 ERAQRRLLIQYPKRQMGNRMFEGN-----TSFLPLKLNTAGVIPPIFASSLLLVPATISG 293
>gi|150396227|ref|YP_001326694.1| preprotein translocase subunit SecY [Sinorhizobium medicae WSM419]
gi|150027742|gb|ABR59859.1| preprotein translocase, SecY subunit [Sinorhizobium medicae WSM419]
Length = 446
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 45/352 (12%)
Query: 139 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 197
+L+S LN + +F K+E +++RL+ T +++ R+G +IPLPG + Q +F S
Sbjct: 7 QLASNLNFS--TFAKAEDLKKRLWFTLGALLVYRLGTYIPLPGLNPDAFAQ---AFQGQS 61
Query: 198 VDELGDF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIK 252
LG F GA +++ F LGI P I ASI++Q++ +VP+L QL+KEG G + I
Sbjct: 62 AGILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPALEQLKKEGEQGRKVIN 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWIC 307
Y + ++ ++A Y + + + S V + T L+ G M + W+
Sbjct: 122 QYTRYGTVLLGAMQA-----YGIAVGLESGSGLVNDPGWFFRISTVISLLGGTMFLMWLG 176
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
+ I+ G G G SLII GI+ L L +L + P +L ++ + V
Sbjct: 177 EQITSRGIGNGISLIIFAGIVAALPSALAGTL-ELGRTGALSTPLILAIIVMVVAVIALI 235
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
V V R++ +QY ++ + + ++P +N SG+ P + + LL P+
Sbjct: 236 VFVERAQRRLLIQYPKRQVGNRMFQGD-----TSHLPLKLNTSGVIPAIFASSLLLLPAT 290
Query: 428 LASILGS---PFWQHVKEILNPETSVGA----RP---WVYYTIYAFFVFLFN 469
LA S P W T VGA +P ++Y + AFF F +
Sbjct: 291 LAGFANSATMPGW--------ATTIVGALAHGQPLYMFLYGAMIAFFAFFYT 334
>gi|403730046|ref|ZP_10948796.1| preprotein translocase SecY subunit [Gordonia rhizosphera NBRC
16068]
gi|403202732|dbj|GAB93127.1| preprotein translocase SecY subunit [Gordonia rhizosphera NBRC
16068]
Length = 441
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 152/339 (44%), Gaps = 39/339 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
++R+++ ++V+ R+G IP PG D + + GS + GA L
Sbjct: 13 DLRKKILFVIGILVLYRLGATIPSPGVDYKTVHACLDEVSQGSSANIYSLISMFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y ++++ A+L++
Sbjct: 73 QLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLTVALALLQST 132
Query: 269 IVACYSLPYSIYA---------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 319
+ + + A A S+ + + ++ GA + W + I+E G G G
Sbjct: 133 GIVALADRGQLLADCSTGDQILADQSIFGLAIIVLVMTAGACVVMWFGELITERGVGNGM 192
Query: 320 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVK 378
SL+I GI +L G + GL+ + ++ + VV + +G R++
Sbjct: 193 SLLIFAGIAARIPAEGKNILDTRGG-------LVFGLVCLAALLIVIGVVFIEQGQRRIP 245
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF-- 436
+QY + S Y+P +N +G+ PV+ + LL P ++ + S
Sbjct: 246 VQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPQLIIQLTQSSTGE 300
Query: 437 ---WQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
WQ + + L +S WVY ++Y + F F
Sbjct: 301 QSSWQRWINQYLTDPSS-----WVYISVYFLMIIFFTYF 334
>gi|294630913|ref|ZP_06709473.1| preprotein translocase, SecY subunit [Streptomyces sp. e14]
gi|292834246|gb|EFF92595.1| preprotein translocase, SecY subunit [Streptomyces sp. e14]
Length = 437
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 166/346 (47%), Gaps = 31/346 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG + + + Q ++ SG+ G
Sbjct: 1 MLTGFARAFRTPDLRKKLLFTLGIIVVYRVGTHIPIPGVNYKAV-QQCVTEASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 308
+++ AIL+ + + +++ +++ T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFNGCSVAGNIVPDRAIFTTITMVICMTAGTAVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 366
+++ G G G S+++ + I + L+ K +L G W F ++ V ++
Sbjct: 180 LVTDRGIGNGMSILMFISIAATFPSALWAIKKSGKLAGG---WIEFGT-VILVGLVMVGL 235
Query: 367 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P+
Sbjct: 236 VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPA 290
Query: 427 ILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
++A G+ W K + + G P +Y T+Y + F F
Sbjct: 291 LVAQFAGGNAGW---KTWVTQNLTKGDHP-IYITLYFLLIVFFAFF 332
>gi|292669838|ref|ZP_06603264.1| preprotein translocase [Selenomonas noxia ATCC 43541]
gi|422343323|ref|ZP_16424251.1| preprotein translocase, SecY subunit [Selenomonas noxia F0398]
gi|292648635|gb|EFF66607.1| preprotein translocase [Selenomonas noxia ATCC 43541]
gi|355378630|gb|EHG25810.1| preprotein translocase, SecY subunit [Selenomonas noxia F0398]
Length = 418
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 159/325 (48%), Gaps = 31/325 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F G++ L D GA K S
Sbjct: 13 ELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFAQGTLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I A+I++Q+L +VP+L Q KEG +G +K ++++ A +A+
Sbjct: 70 VFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGQKKTTKVTRYLTVALAFFQAI--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + + ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 386
+ + + + + ++ ++ F ++ + IV + + + G R+V + Y G ++
Sbjct: 187 PKNIGTIYAYVKAGTISYFSVFAFAVIALAMIV--FVIHIETGFRRVPITYAKRVVGGRM 244
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
AS +IPF +N +G+ P++ + +L FP +A + P+ + V L
Sbjct: 245 ASGHSS---------HIPFKVNQAGVIPIIFASSVLMFPITVAQFIDIPWVKTVAAYLE- 294
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
+P + T+Y F + F F
Sbjct: 295 ----WGKP-LQTTLYVFMIIFFTYF 314
>gi|254492324|ref|ZP_05105497.1| preprotein translocase, SecY subunit [Methylophaga thiooxidans
DMS010]
gi|224462496|gb|EEF78772.1| preprotein translocase, SecY subunit [Methylophaga thiooxydans
DMS010]
Length = 451
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 163/361 (45%), Gaps = 45/361 (12%)
Query: 129 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 188
M KNR + +++L N F R LFV LIV R G F+P+PG D +
Sbjct: 1 MEKNR----QQAAAMLGNGGR--FGELKSRLLFVLGALIVY-RFGTFMPVPGIDPAALAI 53
Query: 189 DYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD 246
+ +D F GA +LS F LGI P I ASI+MQ+L + P L QL+KEG
Sbjct: 54 MFEQQRGTILDMFNMFSGGALERLSVFALGIMPYISASIIMQLLTVVHPKLAQLKKEGAA 113
Query: 247 GHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV----------TAFL- 295
G KI Y + +L A +A+ +A I S S V V TA +
Sbjct: 114 GKRKITQYTRYGTLVLATFQALGIA-------IALESQSAAGVGVVIDPGFVFRITAVIT 166
Query: 296 LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG 355
LV G M + W+ + I+E G G G SLII GI+ G + L L + + F++
Sbjct: 167 LVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPSAIGGTLE--LARTGQLHTFLVI 224
Query: 356 LLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQP 414
L V + VT + V V R++ + Y A + I ++P +N +G+ P
Sbjct: 225 ALMVLALAVTAFVVFVERAQRRIPVHY-----AKRQQGRKMIAGQVTHLPLKLNMAGVIP 279
Query: 415 VLTTTYLLAFPSILASILGSP----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNI 470
+ + ++ FP+ +A GS + + + +++P +P +Y YA + F
Sbjct: 280 PIFASSIILFPATIAGWFGSSDGMGWLKDISTLMSP-----GQP-MYVMAYALAIIFFCF 333
Query: 471 F 471
F
Sbjct: 334 F 334
>gi|444429347|ref|ZP_21224532.1| preprotein translocase SecY subunit [Gordonia soli NBRC 108243]
gi|443889820|dbj|GAC66253.1| preprotein translocase SecY subunit [Gordonia soli NBRC 108243]
Length = 442
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 159/352 (45%), Gaps = 40/352 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------ 196
+L+ +F ++R+++ ++++ R+G IP PG D + + Q G
Sbjct: 1 MLSPVVAAFRTPDLRKKILFVIGIVILYRLGATIPSPGVDYQAVRQCLDEVSRGDSANIY 60
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
S+ + GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y
Sbjct: 61 SLINMFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTR 120
Query: 257 WISLGFAILEAV-IVACYSLPYSIYAAS--------HSVKHVMVTAFLLVCGAMTMSWIC 307
++++ A+L++ IVA + S S+ + + ++ GA + W
Sbjct: 121 YLTVALALLQSTGIVALADRGQLLQDCSTSQQILNDQSIFGLAIIVLVMTAGACVVMWFG 180
Query: 308 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 367
+ I+E G G G SL+I GI +L G + GL+ V ++ +
Sbjct: 181 ELITERGIGNGMSLLIFAGIAARIPAEGKTILDTRGG-------LVFGLVCVAALLIVAG 233
Query: 368 VV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
VV + +G R++ +QY + S Y+P +N +G+ PV+ + LL P
Sbjct: 234 VVFIEQGQRRIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPQ 288
Query: 427 -ILASILGS-----PFWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
IL GS WQ ++ + L +S WVY +Y + F F
Sbjct: 289 LILQLTQGSDQGEQSTWQRYISQYLTDPSS-----WVYILVYFLMIIFFTYF 335
>gi|443625120|ref|ZP_21109571.1| putative protein translocase subunit SecY [Streptomyces
viridochromogenes Tue57]
gi|443341383|gb|ELS55574.1| putative protein translocase subunit SecY [Streptomyces
viridochromogenes Tue57]
Length = 437
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 161/348 (46%), Gaps = 26/348 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 200
+L A +F ++R++L T +IVI R+G +P+PG D + D S G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRVGTHVPIPGVDYTAVQVCVDQASANQGIFGL 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 309
++ AIL+ + + +++ S+ MV + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCPVAGQIVPDRSIFTTMVMVITMTAGTALVMWLGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I++ G G G S+++ + I + L+ + + GS W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPAALWAIKQE--GSLADGWIEFGTVILVGLVMVGLVVF 238
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIA 293
Query: 430 SIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSI 476
G+ W K + G P YY + F + +F F V+I
Sbjct: 294 QFAGGTSGW---KTWIEQHLVQGNHP--YYIVSYFLLIVFFAFFYVAI 336
>gi|282911790|ref|ZP_06319586.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282323486|gb|EFB53802.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WBG10049]
Length = 430
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 165/338 (48%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+ ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVCNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>gi|389799018|ref|ZP_10202024.1| preprotein translocase subunit SecY [Rhodanobacter sp. 116-2]
gi|388443944|gb|EIM00075.1| preprotein translocase subunit SecY [Rhodanobacter sp. 116-2]
Length = 440
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 38/350 (10%)
Query: 140 LSSVLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS- 197
+++ NA K +E+R+R+F +V+ R+G FIP+PG + P+ + V+G+
Sbjct: 1 MAAAKGNALGKLGKLTELRQRIFFVIGALVVFRLGSFIPVPGVN----PEAMTNLVNGNG 56
Query: 198 -VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 254
+D F GA + S F LG+ P I ASI+ Q++ +VPSL LRKEG G K+ Y
Sbjct: 57 LMDMFNMFSGGALERFSVFALGVIPYISASIVFQMMGAVVPSLQSLRKEGEAGKRKMTMY 116
Query: 255 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFL------LVCGAMTMSWICD 308
+ ++ A ++ +A +L + A V + F+ L G M + W+ +
Sbjct: 117 TRYATVALAAFQSFGIAV-ALQGQVAAGGAPVVYTPGFGFIFSSVVGLTAGTMFLMWLGE 175
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI---VTM 365
++E G G G SL+I GI+ G L + LG + ++ LL VF + VT
Sbjct: 176 QMTERGIGNGISLLIFAGIVAG----LPGAVVHTLGMASNGELSLIKLLMVFALALGVTA 231
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
+ V + R++ + Y A + +P IN SG+ P + + LL FP
Sbjct: 232 FVVFMERAQRRITVNY-----ARRSGGQKAYMNQSSNLPLKINMSGVIPPIFASSLLMFP 286
Query: 426 SILASILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S S + Q + + L+P +Y T+++ V F F
Sbjct: 287 ATAVSWFSTGQQSRWLQDLTQALSPGNP------LYETVFSVLVIGFAFF 330
>gi|410091910|ref|ZP_11288456.1| preprotein translocase subunit SecY [Pseudomonas viridiflava
UASWS0038]
gi|409760769|gb|EKN45889.1| preprotein translocase subunit SecY [Pseudomonas viridiflava
UASWS0038]
Length = 444
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAELFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A+++AV
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAVG 133
Query: 270 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
++ + ++ V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSVGLASQGVAFSGDLGFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGIV 191
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P +N +G+ P + + +L FP+ L S G
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQ 291
>gi|383761345|ref|YP_005440327.1| preprotein translocase subunit SecY [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381381613|dbj|BAL98429.1| preprotein translocase SecY subunit [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 449
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 149/320 (46%), Gaps = 45/320 (14%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----------IPQDYLS 192
+L +F ++R++L +T L+++ R+ IPLPG D + I ++L+
Sbjct: 1 MLEAVRNAFRLPDLRQKLLITLGLLMLYRLAANIPLPGVDHQALAVIFQQSDNILLNFLN 60
Query: 193 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIK 252
F SG G ++ LG+ P I ASI++Q+L IVP+L +L KEG G KI
Sbjct: 61 FFSG--------GGLSRMGVMALGVYPYITASIILQLLIPIVPALEELSKEGEAGRAKIN 112
Query: 253 SYIWWISLGFAILEAV---------IVACYSLPYSIYAASHSVKHVMVTAFL-LVCGAMT 302
Y W+++ A+L+A+ ++A + S + VT L + G M
Sbjct: 113 QYTLWLTIPLALLQAIAQGTLLSSNVIAGGVAVLPNWGFSANAWFPTVTMILGMTAGTML 172
Query: 303 MSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI 362
W+ I+E G G G SLII GIL+ + ++LSQ W LL VF I
Sbjct: 173 GVWLGQLITEQGIGNGVSLIIFAGILSSVPFQV-RLLSQ------NWV-----LLIVFLI 220
Query: 363 VTMWAVV----VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTT 418
VT+ ++ V EG R++ +QY + YIP +N +GM P++
Sbjct: 221 VTVATIILIVWVQEGQRRIPVQYGKRVRTMRGNRMMMVGGQSTYIPLRVNTAGMIPLIFA 280
Query: 419 TYLLAFPSILAS-ILGSPFW 437
LL PS LAS + P W
Sbjct: 281 QSLLILPSTLASYFVARPDW 300
>gi|227509951|ref|ZP_03940000.1| preprotein translocase subunit SecY [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227523012|ref|ZP_03953061.1| preprotein translocase subunit SecY [Lactobacillus hilgardii ATCC
8290]
gi|227089830|gb|EEI25142.1| preprotein translocase subunit SecY [Lactobacillus hilgardii ATCC
8290]
gi|227190557|gb|EEI70624.1| preprotein translocase subunit SecY [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 439
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 40/338 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ +F EIR ++ T +++I R+G FI +PG + + + SG V L
Sbjct: 1 MLSTLTGAFKVKEIRNKILFTLFVLIIFRLGSFITVPGVNAKALTSVA---SSGLVSILN 57
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPKYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 260 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A ++V I A ++ S+ ++ SVK +V +L G M +W+ D I+E G G
Sbjct: 118 VVLAFFQSVGITAGFNQLSSLNLVTNPSVKTFIVIGIILTGGTMLTTWMGDMITERGIGN 177
Query: 318 GSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGL------LGVFTIVTMWA 367
G S+II GI+ TG + + GS + W P + + L + T VT W
Sbjct: 178 GISMIIFAGIIARIPTGLQSLWQQYFVGVTGSDL-WQPILFSIALVIIVLAIITFVT-W- 234
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-S 426
V + R++ +QY A DS Y+P +N +G+ PV+ + +A P +
Sbjct: 235 --VQQAERRIPIQY---TRRVAGSPDS------SYLPLKVNVAGVIPVIFASSFIATPQT 283
Query: 427 ILASILG----SPFWQHVKEILNPETSVGARPWVYYTI 460
IL + + ++Q + + N +T+ GA +YTI
Sbjct: 284 ILMAFTNNYSTTTWYQVLNNVFNMQTTTGA---AFYTI 318
>gi|182418829|ref|ZP_02950094.1| preprotein translocase, SecY subunit [Clostridium butyricum 5521]
gi|237666339|ref|ZP_04526324.1| preprotein translocase, SecY subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182377326|gb|EDT74887.1| preprotein translocase, SecY subunit [Clostridium butyricum 5521]
gi|237657538|gb|EEP55093.1| preprotein translocase, SecY subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 428
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 164/345 (47%), Gaps = 37/345 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L +F E+++++ T +L+ + R+G IP+PG I +YL +S S LG
Sbjct: 1 MLQTLRNAFKVPELKKKILWTILLVAVFRMGSHIPVPG-----INSEYLKSLSQSGGLLG 55
Query: 203 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMISGGAFSRSSILALGVMPYINASIIIQLLTVAIPQLEQLSKEGETGRKKIQNLTRY 115
Query: 258 ISLGFAILEAVIVACYSLPYSIYAA-SHSVKHV-------MVTAFLLVCGAMTMSWICDT 309
SL A + L Y +A S+S V +V F LV G W+ D
Sbjct: 116 ASLAIA---------FVLAYGTFAMISNSGGAVGLNTMGKVVVIFSLVVGTTFCMWLGDQ 166
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
++ G G G+S++I V I++ T+ M++ S + L GVF + + AV+
Sbjct: 167 LTVKGIGNGTSILIFVNIISRIPTTIASMMTLKEAGSASIVEIV--LFGVFIVFLLGAVL 224
Query: 370 -VTEGCRKVKLQYYG-FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
+ R++ +QY G F +AA S + IP +I S + ++ + ++ FP
Sbjct: 225 FFSLSERRIPVQYAGKFGGGNAAMVKSQSSN----IPLSIIGSAVLAIIFSMSVMEFPKT 280
Query: 428 LASILGSPFWQHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIF 471
+A++ G + K IL NP ++ W Y +YA FN F
Sbjct: 281 IATLFGGD-KEWAKWILTNPTCVFNSKSWSYMVLYAVLTVFFNWF 324
>gi|406980709|gb|EKE02274.1| hypothetical protein ACD_20C00402G0004 [uncultured bacterium]
Length = 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 22/282 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ----DYLSFVSGSVDELGDFGAELK 209
S ++ +L T V+I + R G IP+ G ++ I + +SF+ +L GA +
Sbjct: 19 SGLKEKLIFTFVMIAVFRFGTQIPIFGINQEAITNLAGNNIISFL-----DLFSGGALGR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAV 268
+S F LGI P I ASI+MQ+L ++P L L+K EG +G KI Y + ++G A +A
Sbjct: 74 VSIFALGIGPYITASIIMQLLTVVIPHLETLQKEEGEEGRRKISQYTRYFTVGLAAFQAT 133
Query: 269 IVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
I + S P I A ++ + L G++ + W+ + I+E G G G S++I +
Sbjct: 134 IFMTFLSSQPGMISAGANVPFVFAQSVVALSAGSVFIMWLAELITEKGIGNGGSMLIFIS 193
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I++G + +QL+ + ++ LL +F V++ E RKV +
Sbjct: 194 IISG-IPVYMRQTAQLVAPNPASQFALVILLLIFLATIFLIVIMQEAVRKV-------II 245
Query: 387 ASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 426
+A R+ + V +IPF +NP G+ P++ +L FP+
Sbjct: 246 VNAKRQVGNKVYGGVNTHIPFKLNPGGVMPIIFAVAILLFPT 287
>gi|291521881|emb|CBK80174.1| protein translocase subunit secY/sec61 alpha [Coprococcus catus
GD/7]
Length = 442
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDFGAELKLSF 212
EI++RL T +++V+ R G IP+PG R + + + +G++D ++ G+ ++S
Sbjct: 19 EIQKRLLFTFLILVVVRFGAQIPIPGVSRDVFASWFANQSNGAMDLFDMMTGGSFSQMSV 78
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 272
F L I+P I +SI+MQ++ I+PSL +++K+ DG EK+K Y +++S+ V+ A
Sbjct: 79 FALSITPYITSSIIMQLMTIIIPSLEEMQKD-QDGREKMKEYTFYLSI-------VLAAI 130
Query: 273 YSLPYSI------YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
SL I Y AS + +++ LV GA + ++ + I++ G G G S+I+
Sbjct: 131 QSLAMGIGFYRGGYLASKNAMGLVIVVVALVTGACVLIYLGEEITKHGVGNGVSMILLFN 190
Query: 327 ILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
I++ + + + V+ ++ ++ V + ++ V + + K+ +Q
Sbjct: 191 IISRLPQDFKTLYDTFMSGKNIVKAGLALIIIVAVILFMFVFVVYLQDAYIKIPVQN--- 247
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVK 441
+S + + V YIPF +N + + PV+ L++ PS++ + G S +
Sbjct: 248 --SSKVQGRRSVGSVGDYIPFKVNSANVIPVIFAGSLMSLPSLITTFAGKTPSGILGEII 305
Query: 442 EILN 445
++LN
Sbjct: 306 KVLN 309
>gi|355575121|ref|ZP_09044688.1| preprotein translocase, SecY subunit [Olsenella sp. oral taxon 809
str. F0356]
gi|354817765|gb|EHF02260.1| preprotein translocase, SecY subunit [Olsenella sp. oral taxon 809
str. F0356]
Length = 426
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 18/295 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDE 200
+LN A +F E+R+++ VTA ++++ R G ++P PG F L + SG++
Sbjct: 1 MLNGIANAFRIPELRKKILVTAGILLLYRFGAYLPAPGVPFASMLAAFQAAASSSGAIAV 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
L F GA ++S F LGI P I A I++Q+ ++PSL +L KEG G KI Y ++
Sbjct: 61 LNLFSGGALSRVSVFSLGIMPYITAQIILQMFQAVIPSLGELAKEGESGQRKITQYTRYL 120
Query: 259 SLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
++ A++ AV + Y + +S ++++++ LL GA+ + W+ + I++ G
Sbjct: 121 TIVLALINAVGYLFLFKSYGIDFSAMGFPEMIENLIIVGVLL-TGAIIIMWLGEVITQRG 179
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SLII I+ G +L +S S+ ++ LL V + V + G
Sbjct: 180 IGNGMSLIIFANIMAGLPHSLTASVST---STTGIIATVVTLL-VIIAIIPVIVYIERGQ 235
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
R++ +QY A + Y+P +N +G+ P++ + LL P+ LA
Sbjct: 236 RRIPVQY-----AKRVVGRRVMGGQATYLPIKVNTAGVVPIIFASALLYLPAQLA 285
>gi|409202235|ref|ZP_11230438.1| preprotein translocase subunit SecY [Pseudoalteromonas flavipulchra
JG1]
Length = 442
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
+E++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A +++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYGTLVLATFQSIGI 134
Query: 271 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-GLPNMMEGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
+ + +L + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLHILALLLIAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 442
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAISA 307
Query: 443 ILNP 446
+L P
Sbjct: 308 VLTP 311
>gi|318058108|ref|ZP_07976831.1| preprotein translocase subunit SecY [Streptomyces sp. SA3_actG]
gi|318076039|ref|ZP_07983371.1| preprotein translocase subunit SecY [Streptomyces sp. SA3_actF]
Length = 437
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 162/338 (47%), Gaps = 27/338 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSG--SVDELGD 203
A +F ++R++L T +IVI R+G +P+PG + + + + + SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIEQANTNSGLFGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I +SI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGILPYITSSIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L+ + + +I+ S+ +V + G T+ W+ + +++ G
Sbjct: 126 VLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGELVTDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G S+++ V I G+ +L+ K L G + + +L V ++ V V +
Sbjct: 186 IGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVIL----VGLVMVALVVFVEQ 241
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 242 AQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFT 296
Query: 433 GSPF-WQH-VKEILNPETSVGARPWVYYTIYAFFVFLF 468
S W +++ L +TS +Y+ + FF F +
Sbjct: 297 DSQASWATWIRDNL-ADTSAWPHVVLYFLLIVFFAFFY 333
>gi|313897252|ref|ZP_07830796.1| preprotein translocase, SecY subunit [Clostridium sp. HGF2]
gi|373122817|ref|ZP_09536677.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
21_3]
gi|422328972|ref|ZP_16409998.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
6_1_45]
gi|312957973|gb|EFR39597.1| preprotein translocase, SecY subunit [Clostridium sp. HGF2]
gi|371658383|gb|EHO23664.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
6_1_45]
gi|371662769|gb|EHO27967.1| preprotein translocase, SecY subunit [Erysipelotrichaceae bacterium
21_3]
Length = 434
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 160/333 (48%), Gaps = 21/333 (6%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGA 206
A+ F +IR R+F T ++ + R G I +PG D LI S + ++ LG G
Sbjct: 6 ADMFKNKDIRNRIFFTLAMLFVFRFGSAITVPGVDVTELIKGMQDSSLFAMINMLGGGGL 65
Query: 207 ELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
E +LS F +G+ P I ASI++Q+L ++P+L +L K G G ++I Y ++++ +
Sbjct: 66 E-QLSIFAMGVGPYITASIIIQLLSMDVIPALTELAKGGATGKKQIDRYTRYLAVVLSFF 124
Query: 266 EA-VIVACYSLPYSIYAASHSV-KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+A +V +S Y + S ++ A LL G+M + WI D IS G G G S+II
Sbjct: 125 QASTLVYSFSTQYKTLLVNGSGWASILYVATLLTAGSMFILWIGDRISMKGIGNGVSMII 184
Query: 324 CVGILTGYT---ETLYKMLSQLLGSSVRWWPFM-LGLLGV-FTIVTMWAVVVTEGCRKVK 378
GI++ T ++ L SS + + GL V + ++ ++ V + RK+
Sbjct: 185 AAGIISRLPYQFTTAWQTLVDPSNSSATFNGILTFGLYIVSYLLIIVFVVFMQTAERKIP 244
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY + + ++ + Y+P IN + + PV+ + ++ P + ++ W
Sbjct: 245 IQYTSSTVTTRKKDMT-------YLPLKINSASVIPVIFASAIMVAPLQICKMV----WP 293
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ ET +G + V IY + LF F
Sbjct: 294 AASWVKTLETYMGMQTPVSLVIYVVLILLFTFF 326
>gi|294783622|ref|ZP_06748946.1| preprotein translocase, SecY subunit [Fusobacterium sp. 1_1_41FAA]
gi|294480500|gb|EFG28277.1| preprotein translocase, SecY subunit [Fusobacterium sp. 1_1_41FAA]
Length = 426
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 159/323 (49%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 209
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + ++ G F+ L+ V++ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVSIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFF 324
>gi|281412749|ref|YP_003346828.1| preprotein translocase, SecY subunit [Thermotoga naphthophila
RKU-10]
gi|281373852|gb|ADA67414.1| preprotein translocase, SecY subunit [Thermotoga naphthophila
RKU-10]
Length = 431
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 161/335 (48%), Gaps = 33/335 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 200
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSQFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTL 125
Query: 261 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+A ++ S P I + + +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFISFSLARSNPDMIAPGVNVFQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G S++I GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAI----ALITIFGIILVQQAERR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
V +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 VTIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +K + A ++Y IY VF F F
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYF 320
>gi|118616605|ref|YP_904937.1| preprotein translocase subunit SecY [Mycobacterium ulcerans Agy99]
gi|183981090|ref|YP_001849381.1| preprotein translocase subunit SecY [Mycobacterium marinum M]
gi|443489561|ref|YP_007367708.1| preprotein translocase, SecY [Mycobacterium liflandii 128FXT]
gi|118568715|gb|ABL03466.1| preprotein translocase, SecY [Mycobacterium ulcerans Agy99]
gi|183174416|gb|ACC39526.1| preprotein translocase, SecY [Mycobacterium marinum M]
gi|442582058|gb|AGC61201.1| preprotein translocase, SecY [Mycobacterium liflandii 128FXT]
Length = 441
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 208
++RR++ T ++V+ R+G +P PG D + Q SG ++ GA L
Sbjct: 13 DLRRKILFTLGIVVLYRLGAALPSPGVDFPNVQQCIKEASSGEAGQIYSLINLFSGGALL 72
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 268
KL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A+L+A
Sbjct: 73 KLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQSGQAKMTQYTRYLAIALAVLQAT 132
Query: 269 IVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
+ + + A S+ ++V ++ GA + W+ + I+E G G G SL
Sbjct: 133 SIVALAANGGLLQGCSLEIIADQSIFTLVVIVMVMTAGAALVMWMGELITERGIGNGMSL 192
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
+I VGI + +Q++ S R + I+ + V V +G R++ +QY
Sbjct: 193 LIFVGI----AARIPAEGNQIMES--RGGVIFAAVCAATLIIIVGVVFVEQGQRRIPVQY 246
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI-------LGS 434
A Y+P +N +G+ PV+ + L+ P ++ + +G
Sbjct: 247 -----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLVRSGSGGVGH 301
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+W + V L+ +++G +Y+ + FF + +
Sbjct: 302 SWWDKFVGTYLSDPSNLGYIA-IYFGLIIFFTYFY 335
>gi|429737059|ref|ZP_19270932.1| preprotein translocase, SecY subunit [Selenomonas sp. oral taxon
138 str. F0429]
gi|429153499|gb|EKX96281.1| preprotein translocase, SecY subunit [Selenomonas sp. oral taxon
138 str. F0429]
Length = 418
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 146/289 (50%), Gaps = 25/289 (8%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+++ T ++ + R+G IP+PG D I Q F G++ L D GA K S
Sbjct: 13 ELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFAQGTLFGLLDLFSGGAFSKFS 69
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F + I+P I A+I++Q+L +VP+L Q KEG +GH+K ++++ A +A+
Sbjct: 70 VFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLTVALAFFQAI--- 126
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
S+ + + ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKSAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 332 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 386
+ + + + + ++ ++ F ++ + IV + + + G R+V + Y G ++
Sbjct: 187 PKNIGTIYAYVKAGTISYFSVFAFAVIALAMIV--FVIHIETGFRRVPITYAKRVVGGRM 244
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 435
AS +IPF +N +G+ P++ + +L FP +A + P
Sbjct: 245 ASGHSS---------HIPFKVNQAGVIPIIFASSVLMFPITVAQFIDVP 284
>gi|262066284|ref|ZP_06025896.1| preprotein translocase, SecY subunit [Fusobacterium periodonticum
ATCC 33693]
gi|291379979|gb|EFE87497.1| preprotein translocase, SecY subunit [Fusobacterium periodonticum
ATCC 33693]
Length = 426
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 159/323 (49%), Gaps = 23/323 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 209
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 388
++ + + ++ G F+ L+ V++ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVSIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 448
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 449 SVGARPWVYYTIYAFFVFLFNIF 471
G VY +YA + F+ F
Sbjct: 302 VFGQNHPVYMILYALVIMFFSFF 324
>gi|228472168|ref|ZP_04056934.1| preprotein translocase, SecY subunit [Capnocytophaga gingivalis
ATCC 33624]
gi|228276371|gb|EEK15095.1| preprotein translocase, SecY subunit [Capnocytophaga gingivalis
ATCC 33624]
Length = 442
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 19/325 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF--GAELKL 210
E+R R+ +T ++++ R G I LPG D ++L + G +D L F GA K
Sbjct: 15 EELRNRIILTIGILLVYRFGAHIILPGIDAKQLSSLTQKTSEGGLLDILNAFTGGAFAKA 74
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 269
S F LGI P I ASI++Q++ +P L +L++EG G +I W+++ I++A
Sbjct: 75 SVFALGIMPYISASIVVQLMGIAIPYLQKLQQEGESGRRRINQITRWLTIAICIVQAPAY 134
Query: 270 ---VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
++ +P + + ++ + +LV G + W+ + I++ G G G SL+I VG
Sbjct: 135 LYSISALGVPEEAFIQGKGLGFIIPSVIILVTGTIFAMWLGEKITDKGVGNGISLLIMVG 194
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ + ++++ + +L LL V + + +T R++ +QY +
Sbjct: 195 IIARMPHAFFGEMNRVHSPMIVIVEILLWLL-----VILGCIFLTLAVRQIPVQYA--RR 247
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
+ + + I YIP +N +G+ P++ ++ P+ LA + S + ++
Sbjct: 248 TTGGQVEKNIFGARQYIPLKLNSAGVMPIIFAQAIMFVPAALAGLSKSDWALSIQNAFRS 307
Query: 447 ETSVGARPWVYYTIYAFFVFLFNIF 471
W Y ++ F + +F F
Sbjct: 308 PFEF----W-YNVLFGFLIIIFTYF 327
>gi|227512884|ref|ZP_03942933.1| preprotein translocase subunit SecY [Lactobacillus buchneri ATCC
11577]
gi|227083884|gb|EEI19196.1| preprotein translocase subunit SecY [Lactobacillus buchneri ATCC
11577]
Length = 439
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 40/338 (11%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ +F EIR ++ T +++I R+G FI +PG + + + SG V L
Sbjct: 1 MLSTLTGAFKVKEIRNKILFTLFVLIIFRLGSFITVPGVNAKALTSVA---SSGLVSILN 57
Query: 203 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPKYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 260 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+ A ++V I A ++ S+ ++ SVK +V +L G M +W+ D I+E G G
Sbjct: 118 VVLAFFQSVGITAGFNQLSSLNLVTNPSVKTFIVIGIILTGGTMLTTWMGDMITERGIGN 177
Query: 318 GSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGL------LGVFTIVTMWA 367
G S+II GI+ TG + + GS + W P + + L + T VT W
Sbjct: 178 GISMIIFAGIIARIPTGLQSLWQQYFVGVTGSDL-WQPILFSIALVIIVLAIITFVT-W- 234
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-S 426
V + R++ +QY A DS Y+P +N +G+ PV+ + +A P +
Sbjct: 235 --VQQAERRIPIQY---TRRVAGSPDS------SYLPLKVNVAGVIPVIFASSFIATPQT 283
Query: 427 ILASILG----SPFWQHVKEILNPETSVGARPWVYYTI 460
IL + + ++Q + + N +T+ GA +YTI
Sbjct: 284 ILMAFTNNYSTTTWYQVLNNVFNMQTTTGA---AFYTI 318
>gi|125625121|ref|YP_001033604.1| preprotein translocase subunit SecY [Lactococcus lactis subsp.
cremoris MG1363]
gi|389855507|ref|YP_006357751.1| preprotein translocase subunit SecY [Lactococcus lactis subsp.
cremoris NZ9000]
gi|14195637|sp|P27148.3|SECY_LACLC RecName: Full=Protein translocase subunit SecY
gi|44073|emb|CAA41939.1| SecY protein [Lactococcus lactis]
gi|124493929|emb|CAL98924.1| preprotein translocase secY subunit [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071929|gb|ADJ61329.1| preprotein translocase subunit SecY [Lactococcus lactis subsp.
cremoris NZ9000]
gi|228026|prf||1715214A secY gene
Length = 439
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 38/341 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+F ++R R+ T ++ + R+G I PG + + + Q ++ VSG+
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L
Sbjct: 64 ----AMQNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITL 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A+ +++ I A + S+ + + + ++ LL G+M ++W+ + I+E GFG G
Sbjct: 120 VLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTGSMVVTWMGEQINEKGFGSG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
S+II GI++G Y E + + S W F++GL+ ++ V
Sbjct: 180 VSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMS---WIFVIGLILSAIVIIYVTTFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ RKV +QY KL A S Y+P +NP+G+ PV+ + P+ +
Sbjct: 237 QQAERKVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQ 287
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L +V + + ++ W YA + LF F
Sbjct: 288 FLQRSQGSNVGWLSTLQNALSYTTWTGMLFYALLIVLFTFF 328
>gi|15224214|ref|NP_179461.1| Preprotein translocase subunit secY [Arabidopsis thaliana]
gi|12643748|sp|Q38885.2|SCY1_ARATH RecName: Full=Preprotein translocase subunit SCY1, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|15983352|gb|AAL11544.1|AF424550_1 At2g18710/MSF3.9 [Arabidopsis thaliana]
gi|4185137|gb|AAD08940.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
gi|16604410|gb|AAL24211.1| At2g18710/MSF3.9 [Arabidopsis thaliana]
gi|17473607|gb|AAL38269.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
gi|27363258|gb|AAO11548.1| At2g18710/MSF3.9 [Arabidopsis thaliana]
gi|330251702|gb|AEC06796.1| Preprotein translocase subunit secY [Arabidopsis thaliana]
Length = 551
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 29/309 (9%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDF 204
FFK + + + +SR+G +IPL G +R +FV G++D+ L F
Sbjct: 133 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRE-------AFV-GNLDQNSILSTLDTF 184
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+G
Sbjct: 185 SGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASVG 244
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI++A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL
Sbjct: 245 FAIVQAIGQVFYLRPY---VNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSL 301
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQ 380
+I I++ + + ++ L LG + V F ++ + V V E RK+ L
Sbjct: 302 LIFTSIISYLPASFGRTTAEALQEGNYTG---LGTIVVSFLLLVLGIVYVQEAERKIPLN 358
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y AS + + Y+PF +N +G+ P++ +T LA P+ LA G ++V
Sbjct: 359 Y-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNV 413
Query: 441 KEILNPETS 449
L P S
Sbjct: 414 AFALTPGGS 422
>gi|254556037|ref|YP_003062454.1| preprotein translocase subunit SecY [Lactobacillus plantarum JDM1]
gi|308180031|ref|YP_003924159.1| preprotein translocase subunit SecY [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380031987|ref|YP_004888978.1| preprotein translocase subunit SecY [Lactobacillus plantarum WCFS1]
gi|418274619|ref|ZP_12890117.1| preprotein translocase, SecY subunit [Lactobacillus plantarum
subsp. plantarum NC8]
gi|254044964|gb|ACT61757.1| preprotein translocase subunit SecY [Lactobacillus plantarum JDM1]
gi|308045522|gb|ADN98065.1| preprotein translocase subunit SecY [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342241230|emb|CCC78464.1| preprotein translocase, SecY subunit [Lactobacillus plantarum
WCFS1]
gi|376010185|gb|EHS83511.1| preprotein translocase, SecY subunit [Lactobacillus plantarum
subsp. plantarum NC8]
Length = 431
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
+IR +L T ++++ R+G +I +PG + + + Q S SG + L F G S
Sbjct: 13 DIRNKLLFTLGVLIVFRLGSYITVPGVNAQAL-QSVAS--SGLISMLNTFSGGGLTNYSI 69
Query: 213 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IV 270
+G+SP I A I++Q+L IVP V+ K+G G K+ W+++ A ++++ I
Sbjct: 70 LAMGVSPYITAQIIVQLLQMDIVPKFVEWGKQGEVGRRKLNQATRWLTIVLAFVQSIGIT 129
Query: 271 ACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
A + SL + S+ + +L GAM +W+ D I++ G G G S+II GI+
Sbjct: 130 AGFNSLSQLKLVNNPSISTYLTIGVILTGGAMLTTWMGDMITDRGIGNGVSIIIFAGIIA 189
Query: 330 GYTETLYKMLSQLL--GSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
++Y++ + S WW F++GL + I+ M+ V + ++ +QY
Sbjct: 190 RMPTSIYQIYQEQFVNVSQSDWWKSGLFVVGLALLVLIIVMFVTWVEQANDRIPIQYT-- 247
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL----ASILGSPFWQHV 440
+ A+ A + S Y+P +N +G+ PV+ + +A P + S G W V
Sbjct: 248 RRAAGAPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILLGFQSSHGDETWYTV 300
Query: 441 -KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
I N +++ GA +Y + LF F
Sbjct: 301 LSNIFNMQSTTGA------ILYTILIVLFTFF 326
>gi|149926586|ref|ZP_01914846.1| protein translocase subunit SecY [Limnobacter sp. MED105]
gi|149824515|gb|EDM83731.1| protein translocase subunit SecY [Limnobacter sp. MED105]
Length = 435
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 152/329 (46%), Gaps = 26/329 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
+++R+RL + +++ RIG IP+PG D + Q + S G + F GA + +
Sbjct: 8 TDLRKRLVFLLLALIVYRIGAHIPVPGIDPTQLKQLFDSQQGGILGMFNMFSGGALSRFT 67
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I ASI+MQ+ +VP L L+KEG G KI Y + + A +A+ ++
Sbjct: 68 VFALGIMPYISASIVMQLASVVVPQLEALKKEGEAGRRKITQYTRYGTFFLATFQAIGIS 127
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI---L 328
+ + TA LV G M + W+ + I+E G G G S++I GI L
Sbjct: 128 IALESQAGLVIDPGMAFRFTTAVSLVTGTMFLMWLGEQITERGLGNGISILIFAGIAAGL 187
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G L++++ G+ M+ +L V VT V V G RK+ + Y ++ +
Sbjct: 188 PGAIGGLFELVRT--GAMNSLVALMIVVLAV--AVTYLVVFVERGQRKITVNYAKRQVGN 243
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------PFWQHVKE 442
+ ++P +N +G+ P + + ++ P+ L S GS F + V +
Sbjct: 244 KIYQGQ-----TSHLPLKLNMAGVIPPIFASSIILLPATLTSWFGSGDGAVVGFLKEVSQ 298
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L+P P +Y +YA + F F
Sbjct: 299 TLSP-----GHP-LYMLLYAAAIVFFCFF 321
>gi|15835411|ref|NP_297170.1| preprotein translocase subunit SecY [Chlamydia muridarum Nigg]
gi|270285591|ref|ZP_06194985.1| preprotein translocase subunit SecY [Chlamydia muridarum Nigg]
gi|270289601|ref|ZP_06195903.1| preprotein translocase subunit SecY [Chlamydia muridarum Weiss]
gi|301336987|ref|ZP_07225189.1| preprotein translocase subunit SecY [Chlamydia muridarum MopnTet14]
gi|14195221|sp|Q9PJN1.1|SECY_CHLMU RecName: Full=Protein translocase subunit SecY
gi|7190825|gb|AAF39600.1| preprotein translocase SecY subunit [Chlamydia muridarum Nigg]
Length = 457
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 42/351 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T ++ G + + WI +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +G+L + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGMLASFPSVLGSIFNKLNLGSQDPSEFGIVSLLVLCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 422
V++ EG RKV +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKVPVQH--------ARRIIGRREVLGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 423 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
FP+ + L S + + + +L+P + VY Y + F F
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------VYSIFYVLLIIFFTYF 342
>gi|384921241|ref|ZP_10021229.1| preprotein translocase subunit SecY [Citreicella sp. 357]
gi|384464875|gb|EIE49432.1| preprotein translocase subunit SecY [Citreicella sp. 357]
Length = 455
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 145/292 (49%), Gaps = 35/292 (11%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 207
+++R R+ T L+++ R+G +IP+PG D + Q F+ + +G GA
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTYIPVPGIDGAALRQ----FMEQAGQGIGGMVSMFTGGAL 76
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
++ F LGI P I ASI++Q+L +VP+L QL+KEG G +K+ Y + ++ A+ +A
Sbjct: 77 GRMGVFALGIMPYISASIIVQLLGAMVPALEQLKKEGEQGRKKMNQYTRYGTVFLALFQA 136
Query: 268 VIVACYSLPYSIYAA--SHSVKHVMVTAFL--LVCGAMTMSWICDTISESGFGQGSSLII 323
Y L S+ A +H A + LV G M + W+ + I+ G G G SLII
Sbjct: 137 -----YGLAVSLEAGDLAHDPGWYFRAAVVITLVGGTMFLMWLGEQITARGIGNGISLII 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY- 381
VGI+ L + + G S P +LG + + +V M+ V + RK+ +QY
Sbjct: 192 FVGIVAEIPAALAQFFAS--GRSGAVSPAVILGAIVMVVVVIMFVVFMERALRKITIQYP 249
Query: 382 ---YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G K+ A ++P +NP+G+ P + + LL P+ +A+
Sbjct: 250 RRQVGMKMTEAQSS---------HLPVKVNPAGVIPAIFASSLLLLPTTIAT 292
>gi|320094560|ref|ZP_08026326.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 178
str. F0338]
gi|319978475|gb|EFW10052.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 178
str. F0338]
Length = 430
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 27/340 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L+ A++F ++RR+L T ++ + R+G FIP PG + I S+ +L
Sbjct: 1 MLSAFAQAFRTPDLRRKLLFTLFIMAVFRLGSFIPTPGVNSTAIQACIAQQNEASLLDLV 60
Query: 203 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 259
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NIFSGGALLQLSVFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQSGQAKLTQYTRYLT 120
Query: 260 LGFAILEAVIVACYSLPYSIYAASHS--VKHVMVTAFL-----LVCGAMTMSWICDTISE 312
+ +L++ + ++A + +K V FL ++ G + W+ + ++E
Sbjct: 121 IFLGVLQSTTTISLARSGQLFAGCNQEVIKDRSVLTFLMMIVVMMAGTGVIMWLGELVTE 180
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLG-SSVRWWPFMLGLLGVFTIVTMWAVVVT 371
G G G SL+I +T ++ SQ+LG W +L +L + +V + V V
Sbjct: 181 RGIGNGMSLLI-------FTSIAARLPSQMLGIGRAGKWGSVLVILVLLLVVALAVVYVE 233
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 431
+ R++ +QY K R+ T YIP IN SG+ PV+ + +LA P ++A
Sbjct: 234 QAQRRIPVQYA--KRMVGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPPMVAQ- 287
Query: 432 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
G P V+ I T Y +YA F F
Sbjct: 288 FGQPTDGWVQWISGHFTQSSG---FYLALYALMTLFFAFF 324
>gi|418465566|ref|ZP_13036500.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359755838|gb|EHK90000.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 441
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 154 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDR----RLIPQDYLSFVSGSVDELGDF---G 205
SE++ RL FV LIV RIG FIP+PG D LI Q G++ ++ + G
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAVVLAHLIEQQ-----KGTIIDMFNMFSGG 70
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A + S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L
Sbjct: 71 ALSRASIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATL 130
Query: 266 EAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+AV ++ LP + + LV G M + W+ + I+E G G G SLII
Sbjct: 131 QAVGIST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLII 189
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
GI+ G + + + Q + +L + + VT + V V G R++K++Y
Sbjct: 190 FAGIVAGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-- 246
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQH 439
A + + ++P +N +G+ P + + ++ FP+ L +G +
Sbjct: 247 ---AKRQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTD 303
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +L+P +P +Y +YA + F+ F
Sbjct: 304 LSILLHP-----GQP-LYLVVYASAIIFFSFF 329
>gi|255526598|ref|ZP_05393505.1| preprotein translocase, SecY subunit [Clostridium carboxidivorans
P7]
gi|296187286|ref|ZP_06855682.1| preprotein translocase, SecY subunit [Clostridium carboxidivorans
P7]
gi|255509706|gb|EET86039.1| preprotein translocase, SecY subunit [Clostridium carboxidivorans
P7]
gi|296048157|gb|EFG87595.1| preprotein translocase, SecY subunit [Clostridium carboxidivorans
P7]
Length = 426
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 21/294 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDELGDFGAELKLSFF 213
E+R+RL T ++I I R+G FIP+PG D +L + G D + GA + S F
Sbjct: 13 ELRKRLLFTILMIAIFRMGNFIPVPGIDTTKLADLTKGGSLFGFYDLIAG-GAFSRFSIF 71
Query: 214 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 273
LG+ P I +SI+MQ+L VP+L QL KEG DG +K++ Y + ++ A ++A+
Sbjct: 72 ALGVVPFINSSIIMQLLQIAVPALEQLSKEGDDGRKKLQQYTRYAAVPLAAIQAIST--- 128
Query: 274 SLPYSIYAASHSVKH--VMVTAFLLVCGAMTMS----WICDTISESGFGQGSSLIICVGI 327
Y I A ++++ + AFL++ T S W+ D I++SG G G SL+I V I
Sbjct: 129 ---YVIIARANALHDPSNKLNAFLIMLTLTTASTFLIWLGDRITDSGIGNGISLLIFVNI 185
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + TL +++ ++ + + ++ F + + V++T R++ +QY G K +
Sbjct: 186 VSRFPTTLNQIVGLQKMETINFIELVALVIVAFAMF-VSVVIMTLSERRIPIQYAG-KTS 243
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHV 440
T +IP N+N S + ++ ++ FP + SPF++ V
Sbjct: 244 GGKLYKGQST----HIPINVNGSAVIGIIFAISVMQFPMTIGQFWPNSPFYKFV 293
>gi|313673448|ref|YP_004051559.1| protein translocase subunit SecY [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940204|gb|ADR19396.1| protein translocase subunit secY/sec61 alpha [Calditerrivibrio
nitroreducens DSM 19672]
Length = 438
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 17/302 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+R+ T L+++ RIG IP PG + + ++ + SG++ D GA +L+
Sbjct: 13 ELRKRILFTLFLLIVYRIGTHIPTPGINSTAL-TEFFARQSGNILGFFDMFTGGALSRLT 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
LG+ P I ASI+M++L + P L +L+K+G +G KI Y + ++ ++++ +A
Sbjct: 72 VCGLGVMPYISASIIMELLAVVSPYLAELKKQGSEGRAKITKYTRYGTVLISMIQGTGIA 131
Query: 272 CYSLPYSIYAASHSV------KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 325
L SV ++TA L G + + W+ + I+E G G G S+II
Sbjct: 132 I-GLEGMTSPTGASVVIYPGWGFRIITALTLTAGTIFLMWLGEKITEKGIGNGMSMIIFA 190
Query: 326 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
GI+ + L L ++ + +L + VT V V R++ +QY K
Sbjct: 191 GIVAAIPNAVTNTLRLLQTGELQILTLVA-ILVIVVAVTAGIVFVEAASRRIPIQY--IK 247
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
+ + T Y+P +N SG+ P++ +++FPS LAS GS + V L+
Sbjct: 248 RGAVGIRGNVATS---YLPLKLNTSGVIPIIFAASIISFPSTLASFSGSELIKRVGFYLS 304
Query: 446 PE 447
P
Sbjct: 305 PS 306
>gi|307718226|ref|YP_003873758.1| hypothetical protein STHERM_c05160 [Spirochaeta thermophila DSM
6192]
gi|306531951|gb|ADN01485.1| hypothetical protein STHERM_c05160 [Spirochaeta thermophila DSM
6192]
Length = 440
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 15/297 (5%)
Query: 145 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 204
N ++ F E+RRR+ T ++++ RIG +P+PG + + Q YL + + + D+
Sbjct: 4 NPISQVFRIPELRRRVLFTLAVLIVFRIGAALPIPGINITALKQYYLQQQTEGLTSITDY 63
Query: 205 ------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
GA S F LG+ P I ASI+MQ+L + PSL + +E G +KI+ Y +
Sbjct: 64 IDFFAGGAFKNFSIFMLGVMPYITASIIMQLLLVMFPSLKAIAEEE-GGRKKIQRYTRYG 122
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
++ +++++ IVA Y+ + V++ + G++ + W+ + +++ G G G
Sbjct: 123 TVLVSLIQSFIVAQYADAIPDAVVLPKLSFVLLGMLTVTTGSLFLMWLGEQVNQRGIGNG 182
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV-TEGCRKV 377
SLII GI+ + +++ Q+ + P + L+ V + + V+ +G RK+
Sbjct: 183 ISLIIFAGIVARLPQAFIQLVEQIQLGELN--PVVALLVLVLFVAVIILVIYEQQGQRKI 240
Query: 378 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ Y A YIP +NPSG+ PV+ + +L FP +A +LG+
Sbjct: 241 PVHY-----AKRVVGRRVYGVQNTYIPMRLNPSGVIPVIFASSVLLFPLQIAQMLGT 292
>gi|300767841|ref|ZP_07077751.1| preprotein translocase subunit SecY [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300494826|gb|EFK29984.1| preprotein translocase subunit SecY [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 427
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 212
+IR +L T ++++ R+G +I +PG + + + Q S SG + L F G S
Sbjct: 9 DIRNKLLFTLGVLIVFRLGSYITVPGVNAQAL-QSVAS--SGLISMLNTFSGGGLTNYSI 65
Query: 213 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IV 270
+G+SP I A I++Q+L IVP V+ K+G G K+ W+++ A ++++ I
Sbjct: 66 LAMGVSPYITAQIIVQLLQMDIVPKFVEWGKQGEVGRRKLNQATRWLTIVLAFVQSIGIT 125
Query: 271 ACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
A + SL + S+ + +L GAM +W+ D I++ G G G S+II GI+
Sbjct: 126 AGFNSLSQLKLVNNPSISTYLTIGVILTGGAMLTTWMGDMITDRGIGNGVSIIIFAGIIA 185
Query: 330 GYTETLYKMLSQLL--GSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 384
++Y++ + S WW F++GL + I+ M+ V + ++ +QY
Sbjct: 186 RMPTSIYQIYQEQFVNVSQSDWWKSGLFVVGLALLVLIIVMFVTWVEQANDRIPIQYT-- 243
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL----ASILGSPFWQHV 440
+ A+ A + S Y+P +N +G+ PV+ + +A P + S G W V
Sbjct: 244 RRAAGAPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILLGFQSSHGDETWYTV 296
Query: 441 -KEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
I N +++ GA +Y + LF F
Sbjct: 297 LSNIFNMQSTTGA------ILYTILIVLFTFF 322
>gi|452955117|gb|EME60517.1| preprotein translocase subunit SecY [Amycolatopsis decaplanina DSM
44594]
Length = 435
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
++R+++ T ++ + RIG IP PG + Q + V +L + GA L+LS
Sbjct: 13 DLRKKILFTLAIVAVYRIGATIPAPGISYSAVQQCTETGSQEGVYQLLNLFSGGALLQLS 72
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ A+L+A V
Sbjct: 73 LFSTGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQGKLTQYTRYLTIALAVLQATGVV 132
Query: 272 CYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+ ++ +SV + + + G M W+ + I+E G G G S++I
Sbjct: 133 ALADRKQLFPQCDTAIIPDNSVYTLAIIVITMTAGTAVMMWLGELITERGVGNGMSVLIF 192
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
+ I +LS G + L+ VF +V + +V+ V +G R++ +QY
Sbjct: 193 LNIAARIPIEGGNILSSAGG-------VVFALICVFGLVIIASVIFVEQGQRRIPVQYAK 245
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
+ + Y+P +N +G+ PV+ + LL P +++ ++G ++
Sbjct: 246 RMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLISRLVGDANSNAGWQV 300
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
V W + +Y + F F I TIT V++
Sbjct: 301 FIQNYIVNQSSWAHVLLYFALIIFFTYFYI---------TITFNVDE 338
>gi|300779805|ref|ZP_07089661.1| preprotein translocase subunit SecY [Corynebacterium genitalium
ATCC 33030]
gi|300533915|gb|EFK54974.1| preprotein translocase subunit SecY [Corynebacterium genitalium
ATCC 33030]
Length = 442
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 42/353 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SG-----SVDELG 202
++F +++R+++ +T LIV+ RIG IP PG D +I + + SG SV L
Sbjct: 6 QAFKDADLRKKILITIALIVLYRIGAQIPTPGVDYAIIAERLSALTESGESNIFSVISLF 65
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+LS F +GI P I ASI+ Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 66 SGGALLQLSIFAIGIMPYITASIITQLLTVVIPRFEELKKEGQAGQTKMTQYTRYLTVAL 125
Query: 263 AILE-AVIVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
A+L+ A IVA + ++ +++ ++ GA+ + W+ + I+E G
Sbjct: 126 ALLQSAGIVALADREQLLGSGVPVLVEDRTIWTLIMMVIVMTSGAILIMWLGEIITEKGV 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGC 374
G G SL+I GI T + SQ P + ++ I+ + +V + +G
Sbjct: 186 GNGMSLLIFAGIATRLPTDGASIYSQ-------SGPVVFAVVVAAVILLVVGIVFIEQGQ 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY K R+ + Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 239 RRIPVQYA--KRMVGRRQYGGTST---YLPLKVNQAGVIPVIFASSLMYVPVLITQIVNS 293
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILY 478
+W + + NP + W Y IY + F F VSI Y
Sbjct: 294 DKPVPPDNWWMSNVMAWLQNPGS------WQYILIYFTLIIFFAYF-YVSIQY 339
>gi|295838424|ref|ZP_06825357.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB74]
gi|197695778|gb|EDY42711.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB74]
Length = 437
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 162/338 (47%), Gaps = 27/338 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSG--SVDELGD 203
A +F ++R++L T +IVI R+G +P+PG + + + + + SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIEQANTNSGLFGLVNLFS 65
Query: 204 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I +SI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGILPYITSSIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L+ + + +I+ S+ +V + G T+ W+ + +++ G
Sbjct: 126 VLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGELVTDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G S+++ V I G+ +L+ K L G + + ++ V I+ V V +
Sbjct: 186 IGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVII----VGLIMVALVVFVEQ 241
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 242 AQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFT 296
Query: 433 GSPF-WQH-VKEILNPETSVGARPWVYYTIYAFFVFLF 468
S W +++ L +TS +Y+ + FF F +
Sbjct: 297 DSQASWATWIRDNL-ADTSAWPHVVLYFLLIVFFAFFY 333
>gi|153812884|ref|ZP_01965552.1| hypothetical protein RUMOBE_03291 [Ruminococcus obeum ATCC 29174]
gi|149831096|gb|EDM86185.1| preprotein translocase, SecY subunit [Ruminococcus obeum ATCC
29174]
Length = 438
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 145/290 (50%), Gaps = 10/290 (3%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 206
+F E+RR+L +I + RIG +P+PG D + Q + S + + F G+
Sbjct: 7 SAFRVKEMRRKLLYLLAMIFVIRIGSQLPIPGVDGSVFKQWFKSNTGDAFNFFDAFTGGS 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+S F L I+P I +SI++Q+L +P+L ++ ++G +G +K+ + ++++G A+ E
Sbjct: 67 FESMSVFALNITPYITSSIIIQLLTIAIPALEEMHRDGEEGRKKMTAITRYVTVGLALFE 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
++ + +I + +K V+V A L AM M WI + I+E G G G S+++ V
Sbjct: 127 SIAMTIGFSRGNIVKDMNFLKAVVVIASLTAGSAMLM-WIGERITEKGVGNGISIVLAVN 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGCRKVKLQYYGF 384
I++ + + + + G++ + +V ++ +++ R++ +QY
Sbjct: 186 IVSRIPSDMTTLYENFIKGKTIAKGMLAGVIIFAIIMVVVVFVLILNGAERRIPVQYSK- 244
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
K+ T IP +N +G+ P++ + +++FP ++A G
Sbjct: 245 KMVGRKMMGGQATN----IPLKVNTAGVIPIIFASSIMSFPGVIAQFAGK 290
>gi|313681338|ref|YP_004059076.1| protein translocase subunit secy/sec61 alpha [Sulfuricurvum
kujiense DSM 16994]
gi|313154198|gb|ADR32876.1| protein translocase subunit secY/sec61 alpha [Sulfuricurvum
kujiense DSM 16994]
Length = 420
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 148/306 (48%), Gaps = 20/306 (6%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----A 206
++ ++ +T + I R+ ++P+PG D +I F S D LG F A
Sbjct: 1 MNQQLVNKILITIGFLFIYRLLAYVPVPGVDTAVIAS---FFNSHQADALGLFNMFSGNA 57
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+LS LGI P I ASI+M++L P+L Q++KE DG K I + ++ I++
Sbjct: 58 VERLSIISLGIMPYITASIIMELLAATFPNLAQMKKE-RDGMVKYMQIIRYATIVITIVQ 116
Query: 267 A--VIVACYSLPYSIYAASHSVKH---VMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
A V V S+ A++ V H V + ++ G M + WI + I++SG G G SL
Sbjct: 117 AIGVSVGLQSMTGQDGASAILVDHSTFVTLAVVSMLAGTMLLMWIGEQITQSGIGNGVSL 176
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 381
II GI++ + + ++ ++ + + +LG++ + + + V G R++ + Y
Sbjct: 177 IIFAGIVSAIPSAISQAVT-MVNTGAMGFLSLLGIIALIIATILVIIYVELGERRIPVTY 235
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 441
A + V YIP +N SG+ PV+ + +L FP + S +P Q +
Sbjct: 236 -----AKKTMMQNQNKRVMNYIPVKVNLSGVIPVIFASAILMFPMTVMSSSTNPTVQAIA 290
Query: 442 EILNPE 447
++LNP
Sbjct: 291 DVLNPN 296
>gi|377558905|ref|ZP_09788476.1| preprotein translocase SecY subunit [Gordonia otitidis NBRC 100426]
gi|377523912|dbj|GAB33641.1| preprotein translocase SecY subunit [Gordonia otitidis NBRC 100426]
Length = 439
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 157/349 (44%), Gaps = 37/349 (10%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-- 200
+L+ +F ++R+++ +IV+ R+G +P PG D + + SG ++
Sbjct: 1 MLSPLVAAFRTPDLRKKILFVIGIIVLYRLGATVPSPGVDYKTVHACIDRINSGGGNQVY 60
Query: 201 ----LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 256
L GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y
Sbjct: 61 SLINLFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTR 120
Query: 257 WISLGFAILEAVIVACYS-----LPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDT 309
++++ A+L++ + + LP S+ + + ++ GA + W +
Sbjct: 121 YLTVALALLQSTGIVALADRGTLLPQECGNVLTDQSIFGLSIIVLVMTAGACLVMWFGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I+E G G G SL+I GI +L+ G + GL+ + ++ + VV
Sbjct: 181 ITERGIGNGMSLLIFSGIAARIPAEGRAILTSRGG-------LVFGLVCLAALIIIAGVV 233
Query: 370 -VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ +G R++ +QY + S Y+P +N +G+ PV+ + LL P ++
Sbjct: 234 FIEQGQRRIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPQLI 288
Query: 429 ASILGSP-----FWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ S WQ V L +S WVY +Y + F F
Sbjct: 289 VQLTKSADGTESGWQSWVSRYLADPSS-----WVYILVYFLMIIFFTYF 332
>gi|227894540|ref|ZP_04012345.1| preprotein translocase subunit SecY [Lactobacillus ultunensis DSM
16047]
gi|227863699|gb|EEJ71120.1| preprotein translocase subunit SecY [Lactobacillus ultunensis DSM
16047]
Length = 431
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 163/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ L+++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q +++N S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFF 326
>gi|217077303|ref|YP_002335021.1| preprotein translocase subunit SecY [Thermosipho africanus TCF52B]
gi|217037158|gb|ACJ75680.1| preprotein translocase, SecY subunit [Thermosipho africanus TCF52B]
Length = 428
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 42/338 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 204
+F E+R R+ T +++++ R+G ++P+PG + + + +GS L F
Sbjct: 7 NAFRIPELRDRIVFTLLMLIVFRLGIYVPVPGVNLKAWGAAFSQMGTGSAGGLLSFYDVF 66
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA S F L ++P I ASI++Q+L ++PSL ++ KEG +G +K + +++
Sbjct: 67 TGGAFRSFSIFALSVTPYINASIILQLLSSVIPSLKEMLKEGEEGRKKFQKLTRNLTVLL 126
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVT-----AFL----LVCGAMTMSWICDTISES 313
L+A +++ + + ++++V FL L+ G M + WI D I+E
Sbjct: 127 GALQAFVIS--------FGLARGFENILVIPLWTFVFLATVSLLAGTMFLLWIGDRITEK 178
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S++I GI+ Y Y + L G ++ W F LLGV ++ + + V +
Sbjct: 179 GIGNGISVLIFAGIVARYPT--YFRTAVLGGLNIFEWIF---LLGVMFLMVIGIIYVQQA 233
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
R++ +QY AS +IP +N SG+ P++ +++ P +A +
Sbjct: 234 ERRIMVQY-----ASRMVGRRIYGGTSTHIPIKVNHSGVIPIIFGWAIVSIPVGIAQLTN 288
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S + + + +P + TIYA +F F F
Sbjct: 289 SETAKSLFSMTSP---------LVITIYAVLIFFFTYF 317
>gi|418471385|ref|ZP_13041208.1| preprotein translocase subunit SecY [Streptomyces coelicoflavus
ZG0656]
gi|371548030|gb|EHN76368.1| preprotein translocase subunit SecY [Streptomyces coelicoflavus
ZG0656]
Length = 437
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 26/297 (8%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 202
A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ LG
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVKQASGNQGPLGLVNMF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTIAL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWICDTISES 313
AIL+ + + ++++ ++ V + G + W+ + I++
Sbjct: 125 AILQGTGLVATARSGALFSNCTVAGQIVPDQAIFTTVVMVVTMTAGTAVVMWLGELITDR 184
Query: 314 GFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 371
G G G S+++ + I + L+ K L G W F +L F +V + V V
Sbjct: 185 GIGNGMSILMFISIAATFPSALWAIKQEGTLAGG---WIEFGTVMLVGFVMVGL-VVFVE 240
Query: 372 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
+ R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 241 QAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
>gi|405981247|ref|ZP_11039574.1| preprotein translocase, SecY subunit [Actinomyces neuii BVS029A5]
gi|404392171|gb|EJZ87231.1| preprotein translocase, SecY subunit [Actinomyces neuii BVS029A5]
Length = 432
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 28/337 (8%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF- 204
A++F ++R++L TA ++++ R G FIP PG + Q L+ SG +D + F
Sbjct: 6 AQAFRTPDLRKKLLFTAFIMLLFRAGSFIPTPGVSFSNV-QKCLANNSQSGLLDLVNLFS 64
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+LS F LGI P I ASI+ Q+L ++P L KEG G K+ Y ++++
Sbjct: 65 GGAMLQLSVFALGIMPYITASIITQLLRVVIPRFEDLHKEGQAGQAKMTQYTRYLTIALG 124
Query: 264 ILEAVIVACYS-----LPYSIYA----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
+L++ + + LP A + SV + ++ + G + W+ + I+E G
Sbjct: 125 VLQSTTIISLARSGRLLPNCSAADPIIPNDSVINYILMIITMTAGTGLIMWLGELITEHG 184
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I I L+ +++ G + +L ++ + +VT+ V V +
Sbjct: 185 IGNGMSLLIFTSITANLPAHLWS-IAKANGGVAK----VLVVIALILVVTLAIVFVEQAQ 239
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R+V +QY + S YIP IN SG+ PV+ +LA P+++A G
Sbjct: 240 RRVPVQYAKRMVGRRLFGGS-----TTYIPMKINMSGVIPVIFAASILAMPTMIAQ-FGD 293
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
P V+ I + + + Y Y V F F
Sbjct: 294 PKQHWVQWI---QRNFSQQTPFYLICYGILVLFFAFF 327
>gi|417571922|ref|ZP_12222776.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Canada BC-5]
gi|400207490|gb|EJO38460.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Canada BC-5]
Length = 440
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 22/291 (7%)
Query: 152 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 206
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGCR-KVKLQYYG 383
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E + ++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQCRIPVNY-- 239
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGS 287
>gi|305665117|ref|YP_003861404.1| preprotein translocase SecY [Maribacter sp. HTCC2170]
gi|88709869|gb|EAR02101.1| preprotein translocase SecY [Maribacter sp. HTCC2170]
Length = 447
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 162/337 (48%), Gaps = 24/337 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 211
E+R R+ +T L+++ R G I LPG D + + + +G + L F GA S
Sbjct: 15 EELRNRIIITLGLLLVYRFGCQIVLPGIDTTQLAELSSNTDNGILGILNAFTGGAFANAS 74
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI-- 269
F LGI P I ASI++Q++ +P L +L+KEG G + I W+++G I++A
Sbjct: 75 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIGICIVQAPAYL 134
Query: 270 --VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ +P S + + ++ + +LV G + W+ + I++ G G G SL+I +GI
Sbjct: 135 YSLGALGVPDSAFVLGKGLDFIVPSVIILVTGCVFAMWLGEKITDKGIGNGISLLIMIGI 194
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
+ ++ + ++ F+L + ++ +V + +V++ R++ +Q Y + A
Sbjct: 195 IATLPQSFVQEFISRTANNNGGLMFILIEVILWFLVILASVLLVMATRQIPVQ-YARRTA 253
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 447
S E + + YIP +N SG+ P++ ++ P ++G F
Sbjct: 254 SGGYEKN-VMGSRQYIPLKLNASGVMPIIFAQAIMFAP----GLIGKTF---------NN 299
Query: 448 TSVGARPWVYYTIYAFFVFLFNI-FDIVSILYTLLFT 483
T+VG W+ F +NI F ++ I++T +T
Sbjct: 300 TAVGQ--WMEVQFQDIFGLAYNILFGLLIIIFTYFYT 334
>gi|383829097|ref|ZP_09984186.1| preprotein translocase, SecY subunit [Saccharomonospora
xinjiangensis XJ-54]
gi|383461750|gb|EID53840.1| preprotein translocase, SecY subunit [Saccharomonospora
xinjiangensis XJ-54]
Length = 435
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 161/351 (45%), Gaps = 40/351 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SVDELGDFGAELKL 210
++R+++ T +++ + RIG P PG + Q L+ V S+ L GA L+L
Sbjct: 13 DLRKKILFTLMIVAVYRIGAVTPAPGVSYPNV-QACLAQVEDQNIFSLLNLFSGGALLQL 71
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S F GI P I ASI++Q+L ++P +L++EG G K+ Y ++++ AIL+A V
Sbjct: 72 SIFATGIMPYITASIIVQLLTVVIPRFEELKREGQAGQGKLTQYTRYLTIALAILQATGV 131
Query: 271 ACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+ ++ +SV + +T + G M W+ + I+E G G G SL+I
Sbjct: 132 IALADRGQLFGNCDQPVLPDNSVYTLTLTVLTMTAGTAVMMWLGELITERGVGNGMSLLI 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I +L+ G + F + LL + I ++ + V +G R++ +QY
Sbjct: 192 FLNIAARIPTEGANILNNQGGLTF----FFICLLALAIIASV--IFVEQGQRRIPVQYAK 245
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQH 439
+ + Y+P +N +G+ PV+ + LL P +L ++G P WQ
Sbjct: 246 RMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLLGQLIGDPNQASGWQR 300
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIVSILYTLLFTITLGVND 490
+ + S WV+ T+Y + F F I TIT V+D
Sbjct: 301 FLQNYVTDQS----HWVHVTLYFAMIIFFTYFYI---------TITFNVDD 338
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,758,133,884
Number of Sequences: 23463169
Number of extensions: 318066907
Number of successful extensions: 1180804
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 1256
Number of HSP's that attempted gapping in prelim test: 1166479
Number of HSP's gapped (non-prelim): 4232
length of query: 516
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 369
effective length of database: 8,910,109,524
effective search space: 3287830414356
effective search space used: 3287830414356
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 79 (35.0 bits)