BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010158
(516 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IQV7|SCY2_ARATH Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis
thaliana GN=SCY2 PE=2 SV=1
Length = 575
Score = 627 bits (1618), Expect = e-179, Method: Compositional matrix adjust.
Identities = 303/442 (68%), Positives = 369/442 (83%), Gaps = 5/442 (1%)
Query: 38 LCTKTFVSVRLSLLDSKRRQ---VPLLNRPFLSRANKRYSVYSSDQLRSDYVNVEASSAL 94
LC++ + +L S+ RQ + + R L + K +S+ SD+ R D ++ E
Sbjct: 33 LCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTD 92
Query: 95 SVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKS 154
++++E +PP D +SQ N +PK ++NRFL+F+R+SSVLN AAE FFKS
Sbjct: 93 ALDVEIIPPDSQDIRNSQN--SAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKS 150
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
EIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV+ELG+FGAE+KLS FQ
Sbjct: 151 EIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQ 210
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSYIWW+S FAI+EA++VA S
Sbjct: 211 LGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTS 270
Query: 275 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 334
L YS++AA+ VKHVM+T+ LLVCGAMTM+W+CDTISESGFG GSSLIICVGILTGYTET
Sbjct: 271 LQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTET 330
Query: 335 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDS 394
L+KML+Q+ GS W P++LGLLG+FT+VTM+AVVVTEGCRK+KLQYYGFKLASA+RE S
Sbjct: 331 LHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGS 390
Query: 395 PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARP 454
PITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILASILGSPF ++KEILNPE++VGA P
Sbjct: 391 PITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPP 450
Query: 455 WVYYTIYAFFVFLFNIFDIVSI 476
WVYY+IYAFFVFLFNIFDI ++
Sbjct: 451 WVYYSIYAFFVFLFNIFDIANL 472
>sp|P0A4H1|SECY_SYNP6 Protein translocase subunit SecY OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1
Length = 439
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 166/338 (49%), Gaps = 26/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 376 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + L+P G PW+Y Y + F+ F
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYF 333
>sp|P0A4H0|SECY_SYNE7 Protein translocase subunit SecY OS=Synechococcus elongatus (strain
PCC 7942) GN=secY PE=3 SV=1
Length = 439
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 166/338 (49%), Gaps = 26/338 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 376 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + L+P G PW+Y Y + F+ F
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYF 333
>sp|O66491|SECY_AQUAE Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5)
GN=secY PE=1 SV=1
Length = 429
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 168/331 (50%), Gaps = 30/331 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 210
E+R++ T ++ VI R+G IP+PG + + +D+L GSV L D G L +L
Sbjct: 12 KELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNLGRL 70
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 269
+ F LG+ P I ASI+MQ+L +PSL +L KE D G KI Y +++L A ++++
Sbjct: 71 TVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLG 130
Query: 270 VACYSL----PYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+A + P I + + +++T LV G M + WI D I+E G G G+SLII
Sbjct: 131 IAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIF 190
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
GI+ + + + ++ + P L L+ I + +V V E R++ +QY G
Sbjct: 191 AGIVANFPNAVIQFYEKVKTGDI--GPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPG 248
Query: 384 FKLAS---AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
++ A R+ Y+P INP+G+ P++ LL PS L + + +PF + +
Sbjct: 249 RQVGRQLYAGRKT--------YLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVI 300
Query: 441 KEILNPETSVGA--RPWVYYTIYAFFVFLFN 469
++ P GA ++Y T FF + +
Sbjct: 301 ADMFQP----GAIFYNFLYVTFIVFFTYFYT 327
>sp|P46249|SECY_CYACA Protein translocase subunit SecY OS=Cyanidium caldarium GN=secY
PE=2 SV=2
Length = 410
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 145/273 (53%), Gaps = 16/273 (5%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 212
++ +R RLF T I + R+G F+P+PG D++L DY + ++ + D KLS
Sbjct: 4 ENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSV 63
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLR-KEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I A+I +Q+L P+L +L+ +EG G +K+ ++S FA +E++ +
Sbjct: 64 FALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIV 123
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L YA ++ ++ T +L+ GAM + W+ D IS G G G+S+II V I + +
Sbjct: 124 ---LRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF 180
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ L L+QL S+++ F L VF+I + V V E RKV + +++
Sbjct: 181 AKFL---LNQLFVHSIKFLDFASYFALIVFSIACI--VFVQEAIRKVPI------ISAKQ 229
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 423
+ + + ++P IN G+ P++ + LLA
Sbjct: 230 LDSTSFYSNDYFLPLRINQGGVMPIILASSLLA 262
>sp|Q1XDJ1|SECY_PORYE Protein translocase subunit SecY OS=Porphyra yezoensis GN=secY PE=3
SV=1
Length = 411
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 168/332 (50%), Gaps = 42/332 (12%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L IVP+L +L+K EG G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + P Y + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKP---YVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ASYSNASLKFGLF----IAIFLLMIIITICVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A PS L I+ +
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + P S +Y +Y + F+ F
Sbjct: 281 ILYLFCPNGS------LYLLLYCALILFFSYF 306
>sp|Q8CNF3|SECY_STAES Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=secY PE=3 SV=1
Length = 430
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>sp|Q5HM19|SECY_STAEQ Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=secY PE=3 SV=1
Length = 430
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 24/327 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTI-YAFF 464
++ + NP +++G +V I +A+F
Sbjct: 298 NIADTANPSSNIGMIIYVVLIIAFAYF 324
>sp|P43804|SECY_HAEIN Protein translocase subunit SecY OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=secY PE=3 SV=1
Length = 441
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIF 471
LNP +P +Y +YA + F+ F
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFF 329
>sp|P28527|SECY_GUITH Protein translocase subunit SecY OS=Guillardia theta GN=secY PE=3
SV=2
Length = 420
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 157/300 (52%), Gaps = 28/300 (9%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
+N + +S K +++ R+ T LIV+SR+G F+P+PG D Q +S + V+ L
Sbjct: 1 MNTSIKSIKKQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIIS--NPLVNFLNV 58
Query: 204 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 260
F G + F LGI P I ASI++Q+ + +PSL +L+K EG G +KI +++L
Sbjct: 59 FSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVAL 118
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+A+++++ V+ + P Y + + V + L G+M + W + I+E G G G S
Sbjct: 119 VWALIQSIGVSFWVRP---YVFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPS 175
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV------VTEGC 374
L+I + I++G L +LL S ++ + L +F +V +++V+ + EG
Sbjct: 176 LLIFINIISG--------LPKLLQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGI 227
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+++ + +++ + Y+P +N SG+ P++ + +L P+ LA ++ +
Sbjct: 228 KRIPI------ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSN 281
>sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays
GN=SECY PE=2 SV=1
Length = 553
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 135 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 192
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++A
Sbjct: 193 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 252
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 253 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 310 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY------ 361
Query: 388 SAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + LN
Sbjct: 362 -ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALN 420
Query: 446 P 446
P
Sbjct: 421 P 421
>sp|Q05217|SECY_STACT Protein translocase subunit SecY OS=Staphylococcus carnosus (strain
TM300) GN=secY PE=3 SV=2
Length = 430
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 150/312 (48%), Gaps = 18/312 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 439
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 440 VKEILNPETSVG 451
+ NP +++G
Sbjct: 299 IANTANPSSNIG 310
>sp|P51297|SECY_PORPU Protein translocase subunit SecY OS=Porphyra purpurea GN=secY PE=3
SV=1
Length = 411
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 170/332 (51%), Gaps = 42/332 (12%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T +L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L I+P L +L+K EG G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + P Y + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKP---YVFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A P+ L + + F
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
V + P S +Y +Y+ + F+ F
Sbjct: 281 VLYLFCPNGS------LYLVLYSVLILFFSYF 306
>sp|Q59912|SECY_STRGB Protein translocase subunit SecY OS=Streptomyces galbus GN=secY
PE=3 SV=1
Length = 437
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 29/344 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNV-QQCVREASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILE--AVIVACYSLPY----SIYAASHSVKHVMVTAFLLVC---GAMTMSWICD 308
+++ AIL+ ++ S P S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q G+ W ++ V I+ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLIMVALVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 429 ASIL-GSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLF 468
A G+ W K + + G P Y+ + FF F +
Sbjct: 293 AQFAGGNSGW---KSWVEQNLTKGDHPIYIVTYFLLIVFFAFFY 333
>sp|P28539|SECY_CHLTR Protein translocase subunit SecY OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=secY PE=3 SV=3
Length = 457
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 174/345 (50%), Gaps = 37/345 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 425
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 426 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 468
+ + L S + + + +L+P + V Y+I+ + +F
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIF 338
>sp|P38376|SECY_CORGL Protein translocase subunit SecY OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=secY PE=3 SV=1
Length = 440
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 42/346 (12%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 262 FAILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+WQ + + P + W Y +Y F+ F
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYF 332
>sp|Q7A086|SECY_STAAW Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MW2) GN=secY PE=3 SV=1
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|Q6G791|SECY_STAAS Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MSSA476) GN=secY PE=3 SV=1
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|Q6GEK3|SECY_STAAR Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MRSA252) GN=secY PE=3 SV=1
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|Q7A468|SECY_STAAN Protein translocase subunit SecY OS=Staphylococcus aureus (strain
N315) GN=secY PE=1 SV=1
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|Q99S39|SECY_STAAM Protein translocase subunit SecY OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secY PE=3 SV=1
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|Q5HDX8|SECY_STAAC Protein translocase subunit SecY OS=Staphylococcus aureus (strain
COL) GN=secY PE=3 SV=1
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|O08387|SECY_STAA8 Protein translocase subunit SecY OS=Staphylococcus aureus (strain
NCTC 8325) GN=secY PE=3 SV=2
Length = 430
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
W Q++ NP ++VG +Y + LF F
Sbjct: 293 KEWAQNIANAANPSSNVG------MVVYIVLIILFTYF 324
>sp|Q9XQU4|SECY_PEA Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum
GN=SECY PE=2 SV=1
Length = 527
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 29/309 (9%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 201
FF + + + +SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 111 FFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRL 170
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 260
G LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+
Sbjct: 171 G---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASV 221
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
GFAI++A+ + PY A + + + + LL G++ ++I + I+E G G+S
Sbjct: 222 GFAIVQAIGQVLFLRPY---ANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTS 278
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
L+I I++ + + SQ + + ++ ++ F ++ + V V E RK+ +
Sbjct: 279 LLIFTNIISYLPASFGRTFSQAFSDA--NYVGLVTIIVSFFLLVLGIVYVQEAERKIPIN 336
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y AS S E Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 337 Y-----ASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTA 391
Query: 441 KEILNPETS 449
LNP S
Sbjct: 392 AVALNPGGS 400
>sp|Q6ZG25|SECY_ORYSJ Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa
subsp. japonica GN=SECY PE=2 SV=1
Length = 556
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 138 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG- 195
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++A
Sbjct: 196 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQA 255
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 256 IGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 312
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F + + V V E RK+ L Y A
Sbjct: 313 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLFLVLGIVYVQEAERKIPLNY-----A 365
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 446
S S + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 366 SRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNP 424
>sp|F6CD01|SECY1_LACKZ Protein translocase subunit SecY 1 OS=Lactobacillus kefiranofaciens
(strain ZW3) GN=secY PE=3 SV=1
Length = 431
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 163/339 (48%), Gaps = 24/339 (7%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGINVKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ LY++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLYQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ Q +++N S+ P V IY + LF F
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFF 326
>sp|Q9HWF5|SECY_PSEAE Protein translocase subunit SecY OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secY
PE=3 SV=1
Length = 442
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 19/302 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAALFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGESGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ L A S+ V V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSV-GLGSQGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVA 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 193 GLPRAIGQSFESARQGDINIFALIGVGLLAVAIIA--FVVFIERGQRRIAVHY-----AK 245
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEIL 444
+ ++P +N +G+ P + + +L FP+ L S G + Q V + +
Sbjct: 246 RQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAI 305
Query: 445 NP 446
P
Sbjct: 306 AP 307
>sp|Q9X1I9|SECY_THEMA Protein translocase subunit SecY OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=secY PE=1
SV=1
Length = 431
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 162/335 (48%), Gaps = 33/335 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 200
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 201 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTL 125
Query: 261 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
+A V+ S P + + ++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 318 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 376
G S++I GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERR 239
Query: 377 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 436
+ +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 437 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ +K + A ++Y IY VF F F
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYF 320
>sp|P77964|SECY_SYNY3 Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=secY PE=3 SV=1
Length = 442
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 166/344 (48%), Gaps = 36/344 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + + +R RL +T L+++ R+G FIP+P DR+ Q +L+
Sbjct: 10 SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+G G + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTG--------GGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
Y +I+ G+ I++ + + L YA ++ + T + G+M + WI + I+E
Sbjct: 122 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I V I+ +TL + + + ++ L+ VF ++ + V V E
Sbjct: 180 RGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGIVFVQE 239
Query: 373 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 240 GTRRI-------PIISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAG 292
Query: 431 I-LGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF 471
G+ EI + S RP WVY +Y+ +F F+ F
Sbjct: 293 FATGNEGLGGFGEIF-VQISNALRPGTWVYTVVYSVMIFFFSYF 335
>sp|P27148|SECY_LACLC Protein translocase subunit SecY OS=Lactococcus lactis subsp.
cremoris GN=secY PE=3 SV=3
Length = 439
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 38/341 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+F ++R R+ T ++ + R+G I PG + + + Q ++ VSG+
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L
Sbjct: 64 ----AMQNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITL 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A+ +++ I A + S+ + + + ++ LL G+M ++W+ + I+E GFG G
Sbjct: 120 VLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTGSMVVTWMGEQINEKGFGSG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
S+II GI++G Y E + + S W F++GL+ ++ V
Sbjct: 180 VSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMS---WIFVIGLILSAIVIIYVTTFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ RKV +QY KL A S Y+P +NP+G+ PV+ + P+ +
Sbjct: 237 QQAERKVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQ 287
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L +V + + ++ W YA + LF F
Sbjct: 288 FLQRSQGSNVGWLSTLQNALSYTTWTGMLFYALLIVLFTFF 328
>sp|Q38885|SCY1_ARATH Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis
thaliana GN=SCY1 PE=1 SV=2
Length = 551
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 29/309 (9%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDF 204
FFK + + + +SR+G +IPL G +R +FV G++D+ L F
Sbjct: 133 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRE-------AFV-GNLDQNSILSTLDTF 184
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+G
Sbjct: 185 SGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASVG 244
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI++A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL
Sbjct: 245 FAIVQAIGQVFYLRPY---VNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSL 301
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQ 380
+I I++ + + ++ L LG + V F ++ + V V E RK+ L
Sbjct: 302 LIFTSIISYLPASFGRTTAEALQEGNYTG---LGTIVVSFLLLVLGIVYVQEAERKIPLN 358
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y AS + + Y+PF +N +G+ P++ +T LA P+ LA G ++V
Sbjct: 359 Y-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNV 413
Query: 441 KEILNPETS 449
L P S
Sbjct: 414 AFALTPGGS 422
>sp|Q9PJN1|SECY_CHLMU Protein translocase subunit SecY OS=Chlamydia muridarum (strain
MoPn / Nigg) GN=secY PE=3 SV=1
Length = 457
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 42/351 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T ++ G + + WI +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +G+L + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGMLASFPSVLGSIFNKLNLGSQDPSEFGIVSLLVLCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 422
V++ EG RKV +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKVPVQH--------ARRIIGRREVLGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 423 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
FP+ + L S + + + +L+P + VY Y + F F
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------VYSIFYVLLIIFFTYF 342
>sp|P46785|SECY_STRCO Protein translocase subunit SecY OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=secY PE=3 SV=2
Length = 437
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 145/295 (49%), Gaps = 22/295 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 202
A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFGLVNMF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVAL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICDTISES 313
AIL+ + + ++++ ++ T +++C G + W+ + I++
Sbjct: 125 AILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGELITDR 184
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 185 GIGNGMSILMFISIAATFPSALWAIKKQ--GELADGWIEFGTVILVGLVMVGLVVFVEQA 242
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
>sp|P38397|SECY_PYRSA Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina
GN=secY PE=3 SV=1
Length = 412
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 160/326 (49%), Gaps = 37/326 (11%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSFVSGSVDELGDF 204
K I+ R+F+T L+V+SR+G FIP+PG D Q +L+ SG G F
Sbjct: 10 KEGIKERIFLTIGLLVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSG-----GGF 64
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ + F LGI P I ASI++Q+ +P+L +L+K EG G +KI + +LG+A
Sbjct: 65 AS---IGIFALGIVPYINASIVIQLATTSIPNLEKLQKEEGEAGRQKISQITRYRALGWA 121
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++ V+ + PY S V + + L G+M + W + I+E G G G SL+I
Sbjct: 122 AIQSLGVSFWVRPYVFNWDSQFVVQMTLA---LTTGSMLIMWFSEQITEKGIGNGPSLLI 178
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I+ G + L + S + S+ + +V + ++ V + ++ + Y
Sbjct: 179 FINIIAGLPK-LIQQKSNAISSTNQ----------TTELVVLASISVYDSRIFIRDRRY- 226
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
+ L + R + Y+P +N G+ P++ + +L P+ L ++ + F + +
Sbjct: 227 YILQTVGRH----CKQTSYLPLRLNQGGVMPIIFASAILVLPAYLGQVIQNQFVLKLVTL 282
Query: 444 LNPETSVGARPWV-YYTIYAFFVFLF 468
L+P +S + Y+++ FF + +
Sbjct: 283 LSPNSSDKNLYLIFYFSLILFFSYFY 308
>sp|P49977|SECY_STRLI Protein translocase subunit SecY OS=Streptomyces lividans GN=secY
PE=3 SV=1
Length = 437
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 145/295 (49%), Gaps = 22/295 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 202
A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 6 APAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFGLVNMF 64
Query: 203 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 262
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVAL 124
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICDTISES 313
AIL+ + + ++++ ++ T +++C G + W+ + I++
Sbjct: 125 AILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGELITDR 184
Query: 314 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 373
G G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 185 GIGNGMSILMFISIAATFPSALWAIKKQ--GELADGWIEFGTVILVGLVMVGLVVFVEQA 242
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
>sp|P43416|SECY_STRSC Protein translocase subunit SecY OS=Streptomyces scabies GN=secY
PE=3 SV=1
Length = 437
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 144/302 (47%), Gaps = 24/302 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF- 204
A +F ++R++L T +IVI RIG IP+PG D + D SG + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYSAVQFCIDQTKSNSGLFGLVNMFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 263
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALA 125
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWICDTISESG 314
+L+ + + ++++ +++ + G + W+ + I++ G
Sbjct: 126 VLQGTGLVATARSGALFSQCPQANNIVPDDSIFTTLTMVVTMTAGTAVVMWLGELITDRG 185
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQ--LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G S+++ + I + L+ + Q L G W F + ++ V ++ V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWSIKEQGDLAGG---WIEFGI-VIAVGLVMVALVVFVEQ 241
Query: 373 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 432
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 242 AQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVVQFS 296
Query: 433 GS 434
GS
Sbjct: 297 GS 298
>sp|P78283|SECY_VIBCH Protein translocase subunit SecY OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secY PE=3
SV=2
Length = 444
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RLF +++ R G F+P+PG D ++ + + G++ E+ + GA +
Sbjct: 17 SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQ-QKGTIVEMFNMFSGGALERA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + ++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 136 AT-GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ ++P IN +G+ P + + ++ FP LA G
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQ 294
>sp|P0A5Z2|SECY_MYCTU Protein translocase subunit SecY OS=Mycobacterium tuberculosis
GN=secY PE=3 SV=1
Length = 441
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 43/341 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 205
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 266 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I VGI +L R + I+ + V V +G R++
Sbjct: 190 MSLLIFVGIAARIPAEGQSILES------RGGVVFTAVCAAALIIIVGVVFVEQGQRRIP 243
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-------ASI 431
+QY A Y+P +N +G+ PV+ + L+ P ++ + +
Sbjct: 244 VQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGV 298
Query: 432 LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+G+ +W + V L+ +++ VY IY + F F
Sbjct: 299 VGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYF 334
>sp|P0A5Z3|SECY_MYCBO Protein translocase subunit SecY OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=secY PE=3 SV=1
Length = 441
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 43/341 (12%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 205
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 266 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I VGI +L R + I+ + V V +G R++
Sbjct: 190 MSLLIFVGIAARIPAEGQSILES------RGGVVFTAVCAAALIIIVGVVFVEQGQRRIP 243
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-------ASI 431
+QY A Y+P +N +G+ PV+ + L+ P ++ + +
Sbjct: 244 VQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGV 298
Query: 432 LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+G+ +W + V L+ +++ VY IY + F F
Sbjct: 299 VGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYF 334
>sp|A3CK84|SECY_STRSV Protein translocase subunit SecY OS=Streptococcus sanguinis (strain
SK36) GN=secY PE=3 SV=1
Length = 435
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 167/345 (48%), Gaps = 47/345 (13%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
++F ++R ++ T +I++ RIG I +PG + + + + LS VSG+
Sbjct: 8 DAFKIKQVRSKILFTIFIILVFRIGTTITVPGINAKALSNLNDLPFLNMLSLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +I+L
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYIAL 119
Query: 261 GFAILEAV-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++A+ I A + +L + A+ +V+ + LL G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQAIGITAGFDTLSRANLVANPNVQTYALICVLLATGSMIVTWLGEQITDKGYGNG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
S+II GI++ Y + + S+ L SS + F+ L+ ++ + V
Sbjct: 180 VSMIIFAGIVSAIPDMIKGIYEDYFVNIPSERLTSS---FIFVGILIVAVLLIIYFTTFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-- 428
+ K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ +
Sbjct: 237 QQAEYKIPIQYT--KVAKGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQ 287
Query: 429 -ASILG-SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
S LG W + L T++ +YAF + LF F
Sbjct: 288 VVSALGYDADWVKTAQSLLATTTISGM-----FMYAFLIVLFTFF 327
>sp|P58118|SECY_LACLA Protein translocase subunit SecY OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=secY PE=3 SV=1
Length = 439
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 40/342 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+F ++R R+ T ++ + R+G I +PG + + + + + ++ VSG+
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITVPGVNVQNLTEVSNLPFLNMMNLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L
Sbjct: 64 ----AMQNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITL 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASHS--VKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 317
A+ +++ I A + S+ + ++M+ A +L G+M ++W+ + I+E GFG
Sbjct: 120 VLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGA-ILTTGSMVVTWMGEQINEKGFGS 178
Query: 318 GSSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
G S+II GI++ Y E + + S W F++GL+ I+
Sbjct: 179 GVSVIIFAGIVSSIPSAVKSVYDEKFLNVRPSEIPMS---WLFVIGLVLSAIIIIYVTTF 235
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + RKV +QY KL A S Y+P +NP+G+ PV+ + P+ +
Sbjct: 236 VQQAERKVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATIL 286
Query: 430 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
L +V + + ++ W YA + LF F
Sbjct: 287 QFLQRSQGSNVGWLSTLQDALSYTTWTGMLFYALLIVLFTFF 328
>sp|P93690|SECY_SPIOL Preprotein translocase subunit SECY, chloroplastic OS=Spinacia
oleracea GN=SECY PE=2 SV=1
Length = 545
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 42/348 (12%)
Query: 120 NETFRSKPKMYKNRFLNFIRLSSVLNNAA---ESFFKSEIRRRLFVTAVLIVISRIGYFI 176
++TF S K+R + +++ + +++ FFK + + L+ +SR+G ++
Sbjct: 96 SQTFESSSGTRKDRSSSARGVAAAIEDSSIDFGDFFKGPLPGKFLTLLGLLALSRLGIYV 155
Query: 177 PLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIV 234
PL G +R D SF+S ++D G +L LGI P I A I+ Q+L +
Sbjct: 156 PLGGVNREAFVGNLDQNSFIS-TLDSFSG-GGIGRLGICSLGIVPFINAQIVFQLLSQVY 213
Query: 235 PSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTA 293
P L L +KEG G +KIK Y + S+GFA+++A+ + P Y +S + V+ +
Sbjct: 214 PKLQDLQKKEGEAGRKKIKQYTQYASVGFALVQAIGQVLFLRP---YVNDYSTEWVLSSV 270
Query: 294 FLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT------------GYTETLYKMLSQ 341
LL G++ +++ + IS+ G G+SL+I I++ Y E Y L+
Sbjct: 271 ILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTVAEAYQEGNYTGLAI 330
Query: 342 LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEP 401
++ S V VF I V V E RK+ + Y AS S +
Sbjct: 331 IVVSFVSL---------VFGI-----VYVQEAERKIPMNY-----ASRYSGKSGGLQKSA 371
Query: 402 YIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 449
Y+PF +N +G+ P++ +T L+ P+ LA G + L P S
Sbjct: 372 YLPFKVNSAGVMPIIFSTSSLSLPATLARFTGLDILKKAAVALTPGGS 419
>sp|Q9Z7S5|SECY_CHLPN Protein translocase subunit SecY OS=Chlamydia pneumoniae GN=secY
PE=3 SV=1
Length = 457
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 36/346 (10%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF---G 205
F +E+R++LF T L+ R+G FIP+PG + L + + + +L D G
Sbjct: 8 FLITELRQKLFYTFALLTACRVGVFIPVPGINGELAVAYFKQLLGSGQNLFQLADIFSGG 67
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAI 264
A +++ LG+ P I ASI++Q+ +P+L + +E D G +I ++ A+
Sbjct: 68 AFAQMTVIALGVVPYISASIIVQLFLVFMPALQREMRESSDQGKRRIGRLTRLFTVALAV 127
Query: 265 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV-------------CGAMTMSWICDTIS 311
+++++ A ++L ++ + ++ + V G + + WI + IS
Sbjct: 128 IQSLLFAKFALRMNLTIPGIVLPTLLSSKLFGVPWIFYITTVVVMTTGTLLLMWIGEQIS 187
Query: 312 ESGFGQGSSLIICVGILTGYTETLYKMLSQL-LG---SSVRWWPFMLGLLGVFTIVTMWA 367
+ G G G SLII +GIL+ + L ++++L LG SS +L L VF V +
Sbjct: 188 DKGIGNGISLIIALGILSSFPSVLGSIVNKLNLGSQDSSDLGLISILILALVFVFVLITT 247
Query: 368 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 427
+++ EG RK+ +QY R + P Y+P +N +G+ PV+ + LL FP+
Sbjct: 248 ILIIEGVRKIPVQY---ARRVIGRREVP--GGGSYLPLKVNYAGVIPVIFASSLLMFPAT 302
Query: 428 LASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 471
+ + S + + + +L P + VY Y + F F
Sbjct: 303 IGQFIASESSWMKRIAALLAPGS------LVYSICYVLLIIFFTYF 342
>sp|P25014|SECY_CYAPA Protein translocase subunit SecY OS=Cyanophora paradoxa GN=secY
PE=3 SV=2
Length = 492
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 153/303 (50%), Gaps = 25/303 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPG----FDRRLIPQDYLSFVSGSVDELGDFGAELK 209
SEIR+R T LI + RIG F+P+PG FD Q+ ++ L GA L+
Sbjct: 48 SEIRKRAISTLCLIFLIRIGTFLPIPGTALNFDLESFQQNNSRNELANILNLLSGGAFLE 107
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAV 268
+ FF LGI P + AS +QVL I+PSL + +KE + + K + ++++ +A ++++
Sbjct: 108 IGFFTLGILPYMNASFFLQVLTKILPSLERFQKEQEEIAQREFKKWTRYLTVIWAFIQSI 167
Query: 269 IVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+++ + PY++ V+V L GA+ + I + I+E G GSSL+I + I
Sbjct: 168 VISWIWIRPYALNWDFFLGLKVVVA---LTLGAVIVMIIAEQITEIGLTNGSSLLIFINI 224
Query: 328 LTGYTETLYKMLSQLLGSSVRW-WPF--MLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
+ + + QL S++ W +P L L + +TM+ ++ + E R V +
Sbjct: 225 IARIPNS----IEQLFNSNINWTFPMISSLILSLSLSFITMFVIIGLQESGRPVPV-LIA 279
Query: 384 FKLASAAREDSPITEVE-----PYIPFNINPSGMQPVL--TTTYLLAFPSILASILGSPF 436
+ A + + PITE E YI F + P+G+ PV+ +T + LA P+ +L
Sbjct: 280 RQEAERQKFNEPITEAERRKTQAYIFFQLLPAGIMPVIFASTIFDLALPAFTNFLLQQGN 339
Query: 437 WQH 439
W +
Sbjct: 340 WGY 342
>sp|P16336|SECY_BACSU Protein translocase subunit SecY OS=Bacillus subtilis (strain 168)
GN=secY PE=3 SV=1
Length = 431
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 23/293 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRR-LIPQDYLSFVSGSVDELGDFG--AELKL 210
S+IR ++ T +++++ RIG FIP+P + L Q + G D L FG A +
Sbjct: 12 SDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQM----GVFDLLNTFGGGALYQF 67
Query: 211 SFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEA 267
S F +GI+P I ASI++Q+L +VP + K+G G K+ + + I LGF
Sbjct: 68 SIFAMGITPYITASIIIQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALG 127
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ +L + V ++ A +L G + W+ + I+ G G G S+II GI
Sbjct: 128 MSYGFNNLANGMLIEKSGVSTYLIIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGI 187
Query: 328 LTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV-----TEGCRKVKLQY 381
++ +T+ ++ +Q +GS+ + + ++ + ++ + AV+V + RK+ +QY
Sbjct: 188 VSSIPKTIGQIYETQFVGSNDQLFIHIVKV--ALLVIAILAVIVGVIFIQQAVRKIAIQY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
A ++P +NP+G+ PV+ L P +AS G+
Sbjct: 246 -----AKGTGRSPAGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGT 293
>sp|Q59916|SECY_STRGR Protein translocase subunit SecY OS=Streptomyces griseus GN=secY
PE=3 SV=1
Length = 437
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 21/294 (7%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSG 65
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ AI
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAI 125
Query: 265 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
L+ + + +++ A S+ ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTPPVMWLGELITDRGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+ + + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSIPMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVAL-VVFVEQAQ 242
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
R++ +Q L YIP +N +G+ PV+ + LL P+++
Sbjct: 243 RRIPVQ-----LPKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALI 291
>sp|Q5SHQ8|SECY_THET8 Protein translocase subunit SecY OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secY PE=1 SV=1
Length = 438
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 133/306 (43%), Gaps = 16/306 (5%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+R+ T +++ R+G FIP PG D I Q++L G V + + G + S
Sbjct: 13 ELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKI-QEFLRTAQGGVFGIINLFSGGNFERFS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY--IWWISLGF---AILE 266
F LGI P I A+I+MQ+L +VP+L +L KEG +G I Y I I+LG L
Sbjct: 72 IFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLA 131
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ + + S V V G + W+ + I+E G G G+SLII G
Sbjct: 132 TAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ + + + + + V F+ L + V + R++ +QY
Sbjct: 192 IVVEWLPQILRTIGLIRTGEVNLVAFLF-FLAFIVLAFAGMAAVQQAERRIPVQY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHVKEILN 445
A YIP +N +G+ P++ +L P LA+ +P Q + N
Sbjct: 246 ARKVVGRRVYGGQATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQGIANFFN 305
Query: 446 PETSVG 451
P G
Sbjct: 306 PTRPSG 311
>sp|O25879|SECY_HELPY Protein translocase subunit SecY OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secY PE=3 SV=1
Length = 420
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 152/308 (49%), Gaps = 26/308 (8%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 207
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKE-RDGMQKYMQIVRYLTILITLIQA 117
Query: 268 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVG--LRSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQ 380
II GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 176 IIFAGIVSGIPSAISGTFN-LVNTGVINILMLIGIV-LIVLATIFAIIYVELAERRIPIS 233
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASILGSPFWQH 439
Y A + + YIP +N SG+ P + + LL FPS IL + Q
Sbjct: 234 Y-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQA 288
Query: 440 VKEILNPE 447
V + L+P+
Sbjct: 289 VADFLSPQ 296
>sp|Q9ZJS9|SECY_HELPJ Protein translocase subunit SecY OS=Helicobacter pylori (strain
J99) GN=secY PE=3 SV=1
Length = 420
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 152/308 (49%), Gaps = 26/308 (8%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 207
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKE-RDGMQKYMQIVRYLTILITLIQA 117
Query: 268 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVG--LRSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQ 380
II GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 176 IIFAGIVSGIPSAISGTFN-LVNTGVINILMLIGIV-LIVLATIFAIIYVELAERRIPIS 233
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASILGSPFWQH 439
Y A + + YIP +N SG+ P + + LL FPS IL + Q
Sbjct: 234 Y-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQA 288
Query: 440 VKEILNPE 447
+ + L+P+
Sbjct: 289 IADFLSPQ 296
>sp|Q05207|SECY_BACLD Protein translocase subunit SecY OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=secY PE=3 SV=2
Length = 431
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 17/290 (5%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI-PQDYLSFVSGSVDELGDFGAELKLSF 212
+IR ++ T +++++ R+G FIP+P + ++ QD +S V G ++ G GA S
Sbjct: 12 KDIRNKIIFTLLMLIVFRLGSFIPVPHVNTEVLKAQDQMS-VFGILNTFGG-GALFNFSI 69
Query: 213 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVI 269
+GI P I ASI++Q+L +VP + K+G G K+ + + I LGF +
Sbjct: 70 LAMGIMPYITASIIIQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALGMS 129
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ V ++ A +L G + W+ + I+ G G G S+II GI+
Sbjct: 130 YGFNNMAGGALITDPGVGTYLLIAIVLTAGTAFLMWLGEQITSHGVGNGISIIIFAGIVA 189
Query: 330 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV-----TEGCRKVKLQYYGF 384
G +T+ ++ +Q + F+ + V +V + A+VV + RK+ +QY
Sbjct: 190 GIPQTINQIYAQQFVDAGDQL-FLQIIKVVVILVAILAIVVGVIFIQQAVRKISIQY--- 245
Query: 385 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+ R P + ++P +NP+G+ PV+ + P +A+ GS
Sbjct: 246 -AKGSGRSPVPGGQ-STHLPLKVNPAGVIPVIFAVAFITTPRTVATFFGS 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,124,064
Number of Sequences: 539616
Number of extensions: 7336422
Number of successful extensions: 21327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 20939
Number of HSP's gapped (non-prelim): 136
length of query: 516
length of database: 191,569,459
effective HSP length: 122
effective length of query: 394
effective length of database: 125,736,307
effective search space: 49540104958
effective search space used: 49540104958
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)