Query 010166
Match_columns 516
No_of_seqs 288 out of 1018
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 21:20:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010166.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010166hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hksa_ a.4.5.22 (A:) Heat-sho 100.0 1.1E-35 7.8E-40 257.1 6.7 95 35-129 2-106 (106)
2 d2htsa_ a.4.5.22 (A:) Heat-sho 100.0 3.6E-30 2.7E-34 217.9 4.2 79 36-114 1-90 (92)
3 d1pp7u_ a.4.5.44 (U:) 39 kda i 94.8 0.0034 2.5E-07 53.4 1.1 75 37-119 27-110 (114)
4 d1flia_ a.4.5.21 (A:) Fli-1 {H 89.0 0.068 4.9E-06 44.0 1.7 62 37-98 5-67 (98)
5 d1awca_ a.4.5.21 (A:) GA bindi 88.9 0.074 5.4E-06 44.7 1.9 56 43-98 6-62 (110)
6 d1hbxg_ a.4.5.21 (G:) Serum re 88.2 0.092 6.7E-06 46.4 2.2 69 43-111 9-82 (155)
7 d1duxc_ a.4.5.21 (C:) Elk-1 {H 86.2 0.078 5.7E-06 42.7 0.4 55 44-98 7-63 (86)
8 d1gvja_ a.4.5.21 (A:) ETS-1 tr 85.1 0.12 8.5E-06 45.1 1.1 64 35-98 37-101 (142)
9 d1puee_ a.4.5.21 (E:) Transcri 77.1 0.22 1.6E-05 40.1 -0.1 56 43-98 7-67 (88)
10 d1wwxa1 a.4.5.21 (A:8-101) E74 70.5 0.71 5.1E-05 37.5 1.4 56 43-98 7-65 (94)
11 d1yo5c1 a.4.5.21 (C:247-334) S 68.6 0.53 3.8E-05 37.8 0.2 59 43-101 8-69 (88)
12 d1seta1 a.2.7.1 (A:1-110) Sery 37.7 64 0.0046 25.0 8.2 53 160-212 39-92 (110)
13 d2gtvx1 a.130.1.3 (X:1-93) Cho 33.7 53 0.0039 25.1 6.9 56 177-232 3-87 (93)
14 d1nkpa_ a.38.1.1 (A:) Myc prot 33.5 38 0.0027 25.6 5.8 33 163-195 52-84 (88)
15 d1wc9a_ d.278.1.2 (A:) Traffic 28.8 27 0.002 29.8 4.6 64 38-102 64-135 (161)
16 d2azea1 e.63.1.1 (A:199-346) T 26.4 86 0.0063 26.5 7.4 13 164-176 3-15 (148)
17 d1nkpb_ a.38.1.1 (B:) Max prot 26.1 33 0.0024 25.6 4.2 30 165-194 49-78 (83)
18 d1fxkc_ a.2.5.1 (C:) Prefoldin 24.7 80 0.0058 25.0 6.7 38 161-198 86-123 (133)
19 d1zyma1 a.60.10.1 (A:22-144) E 22.8 1.6E+02 0.012 22.9 8.8 52 181-232 21-73 (123)
20 d1bf5a1 a.47.1.1 (A:136-316) S 21.7 2.2E+02 0.016 24.3 9.5 40 160-199 6-45 (181)
21 d1fxkc_ a.2.5.1 (C:) Prefoldin 20.6 1.2E+02 0.0088 23.8 7.0 18 166-183 4-21 (133)
22 d1nlwa_ a.38.1.1 (A:) Mad prot 20.1 74 0.0054 23.3 5.2 28 164-191 48-75 (79)
No 1
>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila melanogaster [TaxId: 7227]}
Probab=100.00 E-value=1.1e-35 Score=257.13 Aligned_cols=95 Identities=43% Similarity=0.806 Sum_probs=90.5
Q ss_pred CCCCchHHHHHHhhcCCCCCCcEEEcCCCCeEEEeCCchhhhhhcccccCCCChhhhhhhcccCCceeeC----------
Q 010166 35 NAPPPFLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVD---------- 104 (516)
Q Consensus 35 ~~~p~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~k~VLPkyFkh~nfsSFvRQLN~YGFrKv~---------- 104 (516)
+++|+|+.|||+||+|+++++||+|+++|++|+|+|+.+|+++|||+||+|+||+||+||||+|||+|+.
T Consensus 2 ~~vp~F~~KL~~ml~~~~~~~iI~W~~~G~~fiI~d~~~f~~~vLp~~Fk~~~~~SF~RQLn~yGF~kv~~~~~~~~~~~ 81 (106)
T d1hksa_ 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCCCcHHHHHHHHHhCcCCCCEEEEcCCCCEEEEcCHHHHHHHHhhhhccccCHHHHHHHHHHCCCEEeeccccccccCC
Confidence 5688999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred CCcceEecCCcccCcccccccceec
Q 010166 105 PDRWEFANEGFLRGQKHLLRSISRR 129 (516)
Q Consensus 105 ~d~weF~h~~F~RG~~~LL~~IkRr 129 (516)
++.|+|+|++|+||+++||..|+||
T Consensus 82 ~~~~~f~h~~F~Rg~p~ll~~IkRr 106 (106)
T d1hksa_ 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCccEEECccccCCCHHHHhhCcCC
Confidence 4578999999999999999999886
No 2
>d2htsa_ a.4.5.22 (A:) Heat-shock transcription factor {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=99.95 E-value=3.6e-30 Score=217.89 Aligned_cols=79 Identities=51% Similarity=0.958 Sum_probs=74.5
Q ss_pred CCCchHHHHHHhhcCCCCCCcEEEcCCCCeEEEeCCchhhhhhcccccCCCChhhhhhhcccCCceeeC-----------
Q 010166 36 APPPFLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVD----------- 104 (516)
Q Consensus 36 ~~p~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~k~VLPkyFkh~nfsSFvRQLN~YGFrKv~----------- 104 (516)
+.|+|+.|||+||+|+++++||+|+++|++|+|+|+.+|++.|||+||+|+||+||+||||+|||+|+.
T Consensus 1 ~~P~F~~kL~~~l~~~~~~~iI~W~~~G~~f~I~d~~~f~~~vLp~~F~~~~~~SF~RQLn~yGF~kv~~~~~~~~~~~~ 80 (92)
T d2htsa_ 1 ARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSMLSNN 80 (92)
T ss_dssp CCCHHHHHHHHHHHCGGGTTTCEECTTSSSEEESCHHHHHHHTHHHHCTTCCHHHHHHHHHHTTEECCCCSCTTC----C
T ss_pred CCCChHHHHHHHHcCcCCCCEEEEeCCCCEEEEeCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCeEEeecCCCCCcccCC
Confidence 368899999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCcceEecCC
Q 010166 105 PDRWEFANEG 114 (516)
Q Consensus 105 ~d~weF~h~~ 114 (516)
++.|||+|+.
T Consensus 81 ~~~~eF~h~~ 90 (92)
T d2htsa_ 81 DSRWEFENER 90 (92)
T ss_dssp CCCEEEEESC
T ss_pred CCCEEEecCC
Confidence 4579999984
No 3
>d1pp7u_ a.4.5.44 (U:) 39 kda initiator binding protein, IBP39, N-terminal domain {Trichomonas vaginalis [TaxId: 5722]}
Probab=94.84 E-value=0.0034 Score=53.43 Aligned_cols=75 Identities=16% Similarity=0.320 Sum_probs=54.7
Q ss_pred CCchHHHHHHhhc----CCCCCCc--EEEcCCCCeEEEeCCchhhhhhcccccCCCChhhhhhhcccCCceeeCCC---c
Q 010166 37 PPPFLSKTYDMVD----DLATDSI--VSWSPTSNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPD---R 107 (516)
Q Consensus 37 ~p~Fl~KLy~mv~----dp~~~~i--IsWs~~G~sFvI~d~~~F~k~VLPkyFkh~nfsSFvRQLN~YGFrKv~~d---~ 107 (516)
...|..|||.+|. +|++... |.|..++. |.| +...|++ +|- .+-.|.-.-|..|||+++.+| .
T Consensus 27 ~~rF~~KL~naL~~t~~~P~~~~~iGv~Wi~d~~-f~V-nk~~fa~-lLg-----iK~ntlN~Nfr~~gF~q~~~d~~~~ 98 (114)
T d1pp7u_ 27 NSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTE-FKM-KKKNVAL-VMG-----IKLNTLNVNLRDLAFEQLQHDKGGW 98 (114)
T ss_dssp GGSHHHHHHHHHHHHTTCHHHHHHHTEEESSSSC-EEE-CHHHHHH-HHT-----CCHHHHHHHHHHTTCEEEEEEETTE
T ss_pred cCCchHHHHHHHHHHHhChhhhhccceEEecCCE-EEE-ehHHHHH-HHC-----CChhhhcCcccccCceeeecCCCcc
Confidence 4679999999997 4443222 79999986 777 8899988 443 223555666777999998653 4
Q ss_pred ceEecCCcccCc
Q 010166 108 WEFANEGFLRGQ 119 (516)
Q Consensus 108 weF~h~~F~RG~ 119 (516)
|.|.+++|.|.-
T Consensus 99 ~~w~~~~F~~nS 110 (114)
T d1pp7u_ 99 TQWKRSGFTRNS 110 (114)
T ss_dssp EEEECTTEETTE
T ss_pred eeeccCCccccc
Confidence 667899998864
No 4
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.02 E-value=0.068 Score=44.04 Aligned_cols=62 Identities=24% Similarity=0.369 Sum_probs=45.1
Q ss_pred CCchHHHHHHhhcCCCCCCcEEEcCCCCeEEEeCCchhhhhhcc-cccCCCChhhhhhhcccC
Q 010166 37 PPPFLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLP-KYFKHNNFSSFVRQLNTY 98 (516)
Q Consensus 37 ~p~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~k~VLP-kyFkh~nfsSFvRQLN~Y 98 (516)
......=|.++|.|+++.++|+|...+.-|.+.|+++.++.-=. |-=..=||...-|-|..|
T Consensus 5 ~~~Lw~FL~~LL~d~~~~~~I~W~~~~geFkl~~~~~VA~lWG~~Knk~~M~YeklSRaLRyY 67 (98)
T d1flia_ 5 QIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYY 67 (98)
T ss_dssp SCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHH
T ss_pred cccHHHHHHHHhcCcccCCceEEECCCCEEEeCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Confidence 34455667889999999999999888888999999988873321 111123777777777765
No 5
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.94 E-value=0.074 Score=44.65 Aligned_cols=56 Identities=20% Similarity=0.302 Sum_probs=43.4
Q ss_pred HHHHhhcCCCCCCcEEEcCCCCeEEEeCCchhhhhhcc-cccCCCChhhhhhhcccC
Q 010166 43 KTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLP-KYFKHNNFSSFVRQLNTY 98 (516)
Q Consensus 43 KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~k~VLP-kyFkh~nfsSFvRQLN~Y 98 (516)
=|.++|.|++..++|+|...+.-|.+.|+++.++.-=. |-=..-||...-|-|..|
T Consensus 6 FL~~LL~d~~~~~~I~Wt~~~geFkl~d~e~VA~lWG~~Knk~~M~YeklSRaLRyY 62 (110)
T d1awca_ 6 FLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYY 62 (110)
T ss_dssp HHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGG
T ss_pred HHHHHHcCcccCCCcEEECCCCEEEeCCHHHHHHHHHHhhCCCcccHHHHHHHHHHH
Confidence 36788999999999999998889999999988873321 122345788888888777
No 6
>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.23 E-value=0.092 Score=46.44 Aligned_cols=69 Identities=17% Similarity=0.335 Sum_probs=52.7
Q ss_pred HHHHhhcCCCCCCcEEEcCCCCeEEEeCCchhhhhhcc-cccCCCChhhhhhhcccCC----ceeeCCCcceEe
Q 010166 43 KTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLP-KYFKHNNFSSFVRQLNTYG----FRKVDPDRWEFA 111 (516)
Q Consensus 43 KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~k~VLP-kyFkh~nfsSFvRQLN~YG----FrKv~~d~weF~ 111 (516)
=|.++|.|+++.++|+|...+.-|.+.|+++.++.-=. |.=..=||..+-|-|..|- .+||...++.|.
T Consensus 9 FL~~LL~d~~~~~~I~Wt~~~geFkl~~~~~VA~lWG~rKnk~~M~YeklSRaLRyYY~k~il~Kv~g~r~~Yk 82 (155)
T d1hbxg_ 9 FLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 82 (155)
T ss_dssp HTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred HHHHHHcCccCCCceEEECCCCEEEeCCHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCCEeeccCceeEEE
Confidence 35678999999999999998889999999999884322 2223458999999998873 445666677765
No 7
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.19 E-value=0.078 Score=42.70 Aligned_cols=55 Identities=22% Similarity=0.371 Sum_probs=41.9
Q ss_pred HHHhhcCCCCCCcEEEcC-CCCeEEEeCCchhhhhhcc-cccCCCChhhhhhhcccC
Q 010166 44 TYDMVDDLATDSIVSWSP-TSNSFVVWNPPEFARDLLP-KYFKHNNFSSFVRQLNTY 98 (516)
Q Consensus 44 Ly~mv~dp~~~~iIsWs~-~G~sFvI~d~~~F~k~VLP-kyFkh~nfsSFvRQLN~Y 98 (516)
|.++|+|+++.++|+|.. ++.-|.+.|+++.++.-=. +.=..=||..+-|-|..|
T Consensus 7 L~~LL~d~~~~~~I~Wt~k~~g~Fklv~~~~VA~lWG~~Knk~~MnYeklSRaLRyy 63 (86)
T d1duxc_ 7 LLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRALRYY 63 (86)
T ss_dssp HHHHHHHCSSSSSCEEEETTTTEEECTTHHHHHHHHHHTTTCSCCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCceEeccCCCCEEEecCHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 556788999999999999 6889999999988884321 111234788888888776
No 8
>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.11 E-value=0.12 Score=45.14 Aligned_cols=64 Identities=23% Similarity=0.377 Sum_probs=48.2
Q ss_pred CCCCchHHHHHHhhcCCCCCCcEEEcCCCCeEEEeCCchhhhhhcc-cccCCCChhhhhhhcccC
Q 010166 35 NAPPPFLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLP-KYFKHNNFSSFVRQLNTY 98 (516)
Q Consensus 35 ~~~p~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~k~VLP-kyFkh~nfsSFvRQLN~Y 98 (516)
++.-..-.=|.++|.|+++.++|+|...+..|.+.|+++.++.-=. |-=..-||...-|-|..|
T Consensus 37 ~g~i~LWqFLleLL~d~~~~~~I~Wt~~~~eFkl~d~e~VA~lWG~~Knk~~MnYeKmSRALRyY 101 (142)
T d1gvja_ 37 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYY 101 (142)
T ss_dssp CCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHH
T ss_pred CCeeeHHHHHHHHHcCCccCCccEEECCCCeEEeCCHHHHHHHHHhhcCCCCccHHHHhHHHHHH
Confidence 3344566778889999999999999998888999999998873321 111235788888888776
No 9
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.10 E-value=0.22 Score=40.10 Aligned_cols=56 Identities=16% Similarity=0.242 Sum_probs=38.1
Q ss_pred HHHHhhcCCCCCCcEEEcCCCC-eEEEeC--Cchhhhhhc-cc-ccCCCChhhhhhhcccC
Q 010166 43 KTYDMVDDLATDSIVSWSPTSN-SFVVWN--PPEFARDLL-PK-YFKHNNFSSFVRQLNTY 98 (516)
Q Consensus 43 KLy~mv~dp~~~~iIsWs~~G~-sFvI~d--~~~F~k~VL-Pk-yFkh~nfsSFvRQLN~Y 98 (516)
=|.++|.||++.++|+|...+. -|-+.+ +++.++.-= -+ .=.+=||...-|-|..|
T Consensus 7 FL~~LL~d~~~~~~I~Wt~~~~g~F~fv~~~~e~VA~lWG~~K~Nr~~MnYeklSRaLRyY 67 (88)
T d1puee_ 7 FLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNY 67 (88)
T ss_dssp HHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCccCCCceEeeCCCCceEEEEeCCHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 3677899999999999977654 466554 566766321 11 11344888998888877
No 10
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.50 E-value=0.71 Score=37.46 Aligned_cols=56 Identities=18% Similarity=0.225 Sum_probs=39.5
Q ss_pred HHHHhhcCCC-CCCcEEEcCC-CCeEEEeCCchhhhhhc-ccccCCCChhhhhhhcccC
Q 010166 43 KTYDMVDDLA-TDSIVSWSPT-SNSFVVWNPPEFARDLL-PKYFKHNNFSSFVRQLNTY 98 (516)
Q Consensus 43 KLy~mv~dp~-~~~iIsWs~~-G~sFvI~d~~~F~k~VL-PkyFkh~nfsSFvRQLN~Y 98 (516)
=|.++|.||+ ..++|+|..- ..-|.+.|+++.++.-= -|-=..=||...-|-|..|
T Consensus 7 FL~~LL~d~~~~~~~I~Wt~k~~g~Fkl~d~~~VA~lWG~~K~~~~M~YeklSRaLRyY 65 (94)
T d1wwxa1 7 FVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYY 65 (94)
T ss_dssp HHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCCeEEEEcCCCcEEEEcCHHHHHHHHHhhcCCCCCcHHHHHHHHHHH
Confidence 3677888875 4789999984 45799999998887321 1111235788888888777
No 11
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.57 E-value=0.53 Score=37.81 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=42.9
Q ss_pred HHHHhhcCCC-CCCcEEEcCCCC-eEEEeCCchhhhhhcc-cccCCCChhhhhhhcccCCce
Q 010166 43 KTYDMVDDLA-TDSIVSWSPTSN-SFVVWNPPEFARDLLP-KYFKHNNFSSFVRQLNTYGFR 101 (516)
Q Consensus 43 KLy~mv~dp~-~~~iIsWs~~G~-sFvI~d~~~F~k~VLP-kyFkh~nfsSFvRQLN~YGFr 101 (516)
=|.++|.|++ ..++|+|...+. -|.+.|+++.++.-=. |-=..=||..+-|-|..|--+
T Consensus 8 FL~~LL~d~~~~~~~I~Wt~~~~g~Fkl~~~~~VA~lWG~~Knk~~M~YeklSRALRyYY~~ 69 (88)
T d1yo5c1 8 FLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKK 69 (88)
T ss_dssp HHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTT
T ss_pred HHHHHHcCccccCCCeEEECCCCceEEecCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhc
Confidence 3567788874 689999976665 7999999998874321 212345889999999888543
No 12
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=37.73 E-value=64 Score=25.03 Aligned_cols=53 Identities=9% Similarity=0.219 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010166 160 GLEEEVERLKRDKNVLMQELVRLRQ-QQQASDSQLQTMVQRLQGMEQRHQQMMA 212 (516)
Q Consensus 160 ~LeeEve~LKrDk~~L~qELvrLRQ-qQq~~e~qLq~L~~RLq~mEqrQqqmms 212 (516)
.+..+++.|+.+++.+-.++-+.+. .-..+..++..+.+++..+|...+.+-.
T Consensus 39 ~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~ 92 (110)
T d1seta1 39 ELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEA 92 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666677666666666643321 1223334444555555555555444433
No 13
>d2gtvx1 a.130.1.3 (X:1-93) Chorismate mutase-like protein MJ0246 {Methanococcus jannaschii [TaxId: 2190]}
Probab=33.68 E-value=53 Score=25.06 Aligned_cols=56 Identities=13% Similarity=0.213 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHH----------------HHHHHHHHHHHHHhc----CchHHHHH
Q 010166 177 QELVRLRQQQQASDSQLQT---------MVQRLQGME----------------QRHQQMMAFLAKAVQ----SPGFLAQF 227 (516)
Q Consensus 177 qELvrLRQqQq~~e~qLq~---------L~~RLq~mE----------------qrQqqmmsFLak~lQ----~P~fL~ql 227 (516)
.+|..+|++...++.+|-. +.+|+.-+. .|-++++.-+..... +|.|+.++
T Consensus 3 ~~L~~lR~~Id~iD~~ii~~~~~~~~~Ll~~R~~l~~~I~~~K~~~~~pi~d~~RE~~vl~~~~~~a~~~~l~~~~i~~i 82 (93)
T d2gtvx1 3 EKLAEIRKKIDEIDNKILKARWPWAEKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKI 82 (93)
T ss_dssp THHHHHHHHHHHHHHHHHTSSSSSCCCCHHHHHHHHHHHHHHHHHHTSCSCCHHHHHHHHHHHHHHHHHHTSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhhhCCcCHHHHHHH
Confidence 3555666666777777653 566654433 344556655544322 57788888
Q ss_pred HHhhh
Q 010166 228 VQQQN 232 (516)
Q Consensus 228 v~~~~ 232 (516)
....-
T Consensus 83 f~~ii 87 (93)
T d2gtvx1 83 FQRLI 87 (93)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 14
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.51 E-value=38 Score=25.55 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010166 163 EEVERLKRDKNVLMQELVRLRQQQQASDSQLQT 195 (516)
Q Consensus 163 eEve~LKrDk~~L~qELvrLRQqQq~~e~qLq~ 195 (516)
+-|..|+.+...|..|+..|++++..+..++..
T Consensus 52 ~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666666665555554444443
No 15
>d1wc9a_ d.278.1.2 (A:) Trafficking protein particle complex subunit 3, Bet3 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.82 E-value=27 Score=29.80 Aligned_cols=64 Identities=20% Similarity=0.367 Sum_probs=46.4
Q ss_pred CchHHH-HHHhhcCCCCCCcEEEcCCCCeEEEe-CCchhhhhh-cccccCCCChhhhhh-----hcccCCcee
Q 010166 38 PPFLSK-TYDMVDDLATDSIVSWSPTSNSFVVW-NPPEFARDL-LPKYFKHNNFSSFVR-----QLNTYGFRK 102 (516)
Q Consensus 38 p~Fl~K-Ly~mv~dp~~~~iIsWs~~G~sFvI~-d~~~F~k~V-LPkyFkh~nfsSFvR-----QLN~YGFrK 102 (516)
-.|+.| .|.++=.- ..+...|+.+|+.|++. +..-|.+.| ||+-.+.-+|++|+. -|+.-||+.
T Consensus 64 l~fI~~~~wk~~fgk-~~d~l~~~~~~~~~~~i~~~npl~~fv~lP~~~~~l~y~~f~cGiIrGaL~~~g~~~ 135 (161)
T d1wc9a_ 64 ADVIAKVAFKMYLGI-TPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAV 135 (161)
T ss_dssp HHHHHHTHHHHHHSC-CCEEECCCTTSCEEEEEESCCGGGTTCCCCTTCTTCCTTTHHHHHHHHHHHTTTEEE
T ss_pred HHHHHHHHHHHHcCC-CcccceecCCCCeEEEEecCCCccceEEcCcccCCceehhhHHHHHHHHHHHCCCeE
Confidence 358877 88888874 44568999999876654 444555544 677777788999974 488889864
No 16
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.44 E-value=86 Score=26.55 Aligned_cols=13 Identities=15% Similarity=0.348 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHH
Q 010166 164 EVERLKRDKNVLM 176 (516)
Q Consensus 164 Eve~LKrDk~~L~ 176 (516)
|.+.|++++..++
T Consensus 3 e~~~Le~E~~~~~ 15 (148)
T d2azea1 3 ECQNLEVERQRRL 15 (148)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 3444555544333
No 17
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.09 E-value=33 Score=25.61 Aligned_cols=30 Identities=17% Similarity=0.388 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010166 165 VERLKRDKNVLMQELVRLRQQQQASDSQLQ 194 (516)
Q Consensus 165 ve~LKrDk~~L~qELvrLRQqQq~~e~qLq 194 (516)
|..|+.+...|..|+..|+++...+..+|+
T Consensus 49 I~~L~~~~~~l~~~~~~l~~~~~~L~~~l~ 78 (83)
T d1nkpb_ 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666666666666655555444443
No 18
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.69 E-value=80 Score=24.96 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010166 161 LEEEVERLKRDKNVLMQELVRLRQQQQASDSQLQTMVQ 198 (516)
Q Consensus 161 LeeEve~LKrDk~~L~qELvrLRQqQq~~e~qLq~L~~ 198 (516)
+++-++.|++....|...+..+.++...+..++..+..
T Consensus 86 ~~eA~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~ 123 (133)
T d1fxkc_ 86 FEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSP 123 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666655555555554444443334433333
No 19
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=22.78 E-value=1.6e+02 Score=22.92 Aligned_cols=52 Identities=8% Similarity=0.109 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCchHHHHHHHhhh
Q 010166 181 RLRQQQQASDSQLQTMVQRLQGME-QRHQQMMAFLAKAVQSPGFLAQFVQQQN 232 (516)
Q Consensus 181 rLRQqQq~~e~qLq~L~~RLq~mE-qrQqqmmsFLak~lQ~P~fL~qlv~~~~ 232 (516)
||++=......+|..+.+++...- .....++..-..++++|.|+........
T Consensus 21 rl~~A~~~~~~~L~~l~~~~~~~~~~e~a~If~ah~~iL~D~~l~~~v~~~I~ 73 (123)
T d1zyma1 21 RFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIK 73 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 444434444445555555554321 2345577777889999999988776653
No 20
>d1bf5a1 a.47.1.1 (A:136-316) STAT-1, coiled coil domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.74 E-value=2.2e+02 Score=24.27 Aligned_cols=40 Identities=23% Similarity=0.312 Sum_probs=34.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010166 160 GLEEEVERLKRDKNVLMQELVRLRQQQQASDSQLQTMVQR 199 (516)
Q Consensus 160 ~LeeEve~LKrDk~~L~qELvrLRQqQq~~e~qLq~L~~R 199 (516)
.++..|..|+..-..+.+++..|.+.|.....+++++..|
T Consensus 6 ei~~~v~~l~~~vq~~e~~ik~Led~Qd~fdf~yktlq~~ 45 (181)
T d1bf5a1 6 ELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNR 45 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3778899999999999999999999999998888877655
No 21
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.60 E-value=1.2e+02 Score=23.80 Aligned_cols=18 Identities=6% Similarity=0.178 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010166 166 ERLKRDKNVLMQELVRLR 183 (516)
Q Consensus 166 e~LKrDk~~L~qELvrLR 183 (516)
++|.+..+.|.+++..|.
T Consensus 4 ~eL~~~~~~l~~~l~~l~ 21 (133)
T d1fxkc_ 4 AEIVAQLNIYQSQVELIQ 21 (133)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 22
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.15 E-value=74 Score=23.25 Aligned_cols=28 Identities=11% Similarity=0.322 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010166 164 EVERLKRDKNVLMQELVRLRQQQQASDS 191 (516)
Q Consensus 164 Eve~LKrDk~~L~qELvrLRQqQq~~e~ 191 (516)
-|..|+.....|..|+..|+.+++.+..
T Consensus 48 yI~~L~~~~~~l~~~~~~L~~~~~~L~~ 75 (79)
T d1nlwa_ 48 HIKKLEDSDRKAVHQIDQLQREQRHLKR 75 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555555554444433
Done!