Query 010168
Match_columns 516
No_of_seqs 598 out of 5071
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 21:22:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010168.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010168hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xai_A ASB-9, ankyrin repeat a 100.0 6.1E-39 2.1E-43 304.3 23.8 208 234-456 2-210 (261)
2 3d9h_A CDNA FLJ77766, highly s 100.0 1.6E-38 5.4E-43 305.4 24.3 212 228-454 52-264 (285)
3 3b7b_A Euchromatic histone-lys 100.0 2E-38 6.9E-43 296.1 23.7 217 227-457 3-222 (237)
4 1oy3_D Transcription factor in 100.0 6.9E-39 2.3E-43 307.2 20.8 214 229-456 3-269 (282)
5 1k1a_A B-cell lymphoma 3-encod 100.0 2.3E-38 7.9E-43 296.4 22.9 215 229-457 3-228 (241)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 6.3E-39 2.1E-43 302.8 18.8 189 232-420 54-245 (253)
7 3aji_A 26S proteasome non-ATPa 100.0 5.9E-38 2E-42 291.7 21.9 220 203-423 9-230 (231)
8 2f8y_A Notch homolog 1, transl 100.0 2.2E-37 7.4E-42 286.3 24.9 195 231-425 21-218 (223)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-37 3.9E-42 294.1 22.9 200 230-429 5-221 (253)
10 3ljn_A Hypothetical protein; a 100.0 6.3E-38 2.2E-42 312.3 22.1 267 199-480 19-315 (364)
11 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-37 4.7E-42 298.3 23.7 255 201-479 6-278 (285)
12 3utm_A Tankyrase-1; tankyrase, 100.0 1.8E-37 6E-42 307.0 24.5 227 199-426 23-308 (351)
13 2rfa_A Transient receptor pote 100.0 9.7E-38 3.3E-42 290.5 21.3 192 235-426 3-225 (232)
14 4b93_B Ankyrin repeat domain-c 100.0 5.7E-38 2E-42 298.3 19.9 214 230-457 6-230 (269)
15 4b93_B Ankyrin repeat domain-c 100.0 5.7E-38 2E-42 298.3 16.6 229 188-422 11-243 (269)
16 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-37 4.5E-42 291.2 18.8 226 197-422 6-240 (241)
17 3aji_A 26S proteasome non-ATPa 100.0 5.6E-37 1.9E-41 285.2 21.8 209 235-457 6-217 (231)
18 2dzn_A Probable 26S proteasome 100.0 1.1E-36 3.7E-41 282.6 23.3 207 235-455 2-218 (228)
19 3kea_A K1L; tropism, ANK repea 100.0 3.5E-37 1.2E-41 295.9 17.5 197 228-427 24-224 (285)
20 2xai_A ASB-9, ankyrin repeat a 100.0 7.7E-37 2.6E-41 289.9 19.4 218 201-424 4-223 (261)
21 3hra_A Ankyrin repeat family p 100.0 3.2E-36 1.1E-40 273.7 22.5 188 234-421 4-201 (201)
22 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-37 3.8E-42 291.0 11.4 196 230-425 3-211 (236)
23 2etb_A Transient receptor pote 100.0 3E-37 1E-41 291.8 14.5 192 235-426 2-249 (256)
24 1wdy_A 2-5A-dependent ribonucl 100.0 1.9E-35 6.6E-40 283.3 26.7 225 200-426 39-281 (285)
25 2fo1_E LIN-12 protein; beta-ba 100.0 2.4E-36 8.2E-41 301.6 20.1 226 198-423 123-371 (373)
26 1n11_A Ankyrin; clathrin, BAND 100.0 2.5E-36 8.7E-41 308.3 20.3 244 198-457 12-257 (437)
27 1s70_B 130 kDa myosin-binding 100.0 9.8E-36 3.3E-40 288.0 22.5 211 231-455 36-275 (299)
28 4g8k_A 2-5A-dependent ribonucl 100.0 6.7E-36 2.3E-40 294.4 21.5 250 201-479 26-326 (337)
29 4gpm_A Engineered protein OR26 100.0 1.4E-35 4.8E-40 260.7 21.1 159 236-425 5-163 (169)
30 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-35 3.6E-40 285.7 22.1 220 198-423 57-279 (285)
31 1oy3_D Transcription factor in 100.0 6.2E-36 2.1E-40 286.6 19.7 212 199-410 8-270 (282)
32 1n11_A Ankyrin; clathrin, BAND 100.0 9.6E-36 3.3E-40 304.0 22.1 240 202-457 148-389 (437)
33 3b7b_A Euchromatic histone-lys 100.0 2.3E-35 7.8E-40 275.4 22.3 219 199-419 10-231 (237)
34 2fo1_E LIN-12 protein; beta-ba 100.0 6.2E-37 2.1E-41 305.9 12.1 211 233-457 123-358 (373)
35 4g8k_A 2-5A-dependent ribonucl 100.0 2.2E-35 7.6E-40 290.7 21.4 226 231-479 21-298 (337)
36 3eu9_A Huntingtin-interacting 100.0 2.1E-35 7.3E-40 275.7 20.0 218 203-422 12-234 (240)
37 2pnn_A Transient receptor pote 100.0 3.3E-36 1.1E-40 287.5 14.7 195 229-423 7-258 (273)
38 3utm_A Tankyrase-1; tankyrase, 100.0 2.7E-35 9.4E-40 291.2 21.6 227 230-479 19-305 (351)
39 4gpm_A Engineered protein OR26 100.0 5.2E-35 1.8E-39 257.1 20.7 130 270-430 6-135 (169)
40 2dzn_A Probable 26S proteasome 100.0 4.3E-35 1.5E-39 271.7 20.4 214 202-419 4-226 (228)
41 3eu9_A Huntingtin-interacting 100.0 1.6E-34 5.4E-39 269.7 23.5 201 229-429 3-208 (240)
42 3jxi_A Vanilloid receptor-rela 100.0 9.4E-36 3.2E-40 282.2 13.1 193 234-426 4-253 (260)
43 2f8y_A Notch homolog 1, transl 100.0 1.7E-35 5.8E-40 273.5 14.4 210 246-478 2-215 (223)
44 3kea_A K1L; tropism, ANK repea 100.0 3E-35 1E-39 282.5 14.9 219 198-427 29-250 (285)
45 1s70_B 130 kDa myosin-binding 100.0 3.9E-34 1.3E-38 276.8 16.0 214 203-419 43-285 (299)
46 4hbd_A KN motif and ankyrin re 100.0 1.1E-33 3.7E-38 270.2 13.6 189 234-422 75-274 (276)
47 2rfm_A Putative ankyrin repeat 100.0 2.5E-32 8.5E-37 246.2 18.8 161 262-422 29-191 (192)
48 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.1E-31 3.6E-36 236.8 21.3 160 231-421 10-169 (169)
49 3ljn_A Hypothetical protein; a 100.0 4.2E-33 1.4E-37 277.5 12.3 223 199-425 52-316 (364)
50 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.3E-32 1.8E-36 236.9 17.8 158 234-423 4-162 (162)
51 1ikn_D Protein (I-kappa-B-alph 100.0 4.6E-33 1.6E-37 259.7 11.3 210 199-408 7-229 (236)
52 2rfa_A Transient receptor pote 100.0 4.2E-32 1.4E-36 252.3 17.7 201 267-484 2-227 (232)
53 3v30_A DNA-binding protein rfx 100.0 3E-32 1E-36 241.1 15.4 167 235-401 2-171 (172)
54 3v31_A Ankyrin repeat family A 100.0 1.3E-31 4.6E-36 235.7 18.5 160 235-425 3-162 (167)
55 1sw6_A Regulatory protein SWI6 100.0 2.6E-32 8.8E-37 267.3 11.9 197 237-455 99-326 (327)
56 1awc_B Protein (GA binding pro 100.0 9.2E-31 3.1E-35 226.8 20.2 151 235-417 2-152 (153)
57 2rfm_A Putative ankyrin repeat 100.0 1.5E-31 5E-36 241.2 15.4 163 226-388 26-190 (192)
58 3v31_A Ankyrin repeat family A 100.0 2.8E-31 9.5E-36 233.6 16.7 159 200-391 3-161 (167)
59 1sw6_A Regulatory protein SWI6 100.0 3.9E-32 1.3E-36 266.0 11.9 176 226-409 121-327 (327)
60 3twr_A Tankyrase-2; ankyrin re 100.0 7E-31 2.4E-35 230.6 17.2 159 232-422 5-164 (165)
61 3v30_A DNA-binding protein rfx 100.0 1E-30 3.5E-35 231.2 18.0 159 268-426 2-163 (172)
62 2etb_A Transient receptor pote 100.0 9.8E-32 3.4E-36 253.9 12.1 198 267-480 1-247 (256)
63 3hra_A Ankyrin repeat family p 100.0 3.5E-30 1.2E-34 233.7 21.3 186 202-388 7-201 (201)
64 2vge_A RELA-associated inhibit 100.0 4.8E-34 1.6E-38 264.6 -5.1 186 229-417 15-207 (229)
65 3f6q_A Integrin-linked protein 100.0 1.2E-30 4E-35 232.5 16.8 162 234-426 4-166 (179)
66 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.8E-30 2.3E-34 222.0 19.3 153 235-420 2-155 (156)
67 2pnn_A Transient receptor pote 100.0 4.1E-31 1.4E-35 252.1 12.2 173 231-403 50-272 (273)
68 3f6q_A Integrin-linked protein 100.0 6.1E-30 2.1E-34 227.8 17.1 134 266-430 3-137 (179)
69 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.3E-31 2.8E-35 244.8 7.5 177 233-410 3-193 (239)
70 3jxi_A Vanilloid receptor-rela 100.0 9.4E-30 3.2E-34 240.8 12.6 162 232-393 43-253 (260)
71 4hbd_A KN motif and ankyrin re 100.0 2.1E-29 7.2E-34 240.5 14.6 161 228-388 104-273 (276)
72 3t8k_A Uncharacterized protein 100.0 3E-29 1E-33 224.1 9.2 161 235-422 6-178 (186)
73 2vge_A RELA-associated inhibit 100.0 1.6E-30 5.5E-35 240.8 1.0 192 251-457 1-200 (229)
74 1d9s_A Cyclin-dependent kinase 100.0 2.2E-28 7.7E-33 207.2 13.8 134 258-423 2-136 (136)
75 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.7E-29 3E-33 231.1 10.4 160 266-426 3-167 (239)
76 1bi7_B P16INK4A, MTS1, multipl 99.9 5.6E-28 1.9E-32 209.9 10.6 140 265-405 9-151 (156)
77 2aja_A Ankyrin repeat family p 99.9 4.8E-29 1.7E-33 246.7 -1.1 183 232-422 89-343 (376)
78 1d9s_A Cyclin-dependent kinase 99.9 4.9E-27 1.7E-31 198.9 10.9 132 227-390 4-136 (136)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 3E-27 1E-31 205.4 9.3 143 229-372 6-151 (156)
80 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-25 4.6E-30 187.0 16.7 126 267-423 1-126 (126)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 7.7E-26 2.6E-30 191.5 15.4 90 233-322 12-101 (136)
82 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-25 4.3E-30 190.2 16.7 124 265-388 11-136 (136)
83 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-26 4E-31 196.8 9.8 134 258-423 1-134 (137)
84 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-25 4.4E-30 196.2 15.7 155 203-390 8-162 (162)
85 2aja_A Ankyrin repeat family p 99.9 4.7E-28 1.6E-32 239.6 -1.3 177 234-425 64-252 (376)
86 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.3E-26 2.2E-30 199.7 12.4 148 265-457 11-158 (169)
87 3deo_A Signal recognition part 99.9 4.6E-27 1.6E-31 209.9 3.9 140 232-420 41-181 (183)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.3E-25 1.5E-29 183.9 15.0 125 235-390 2-126 (126)
89 3twr_A Tankyrase-2; ankyrin re 99.9 2.3E-25 7.7E-30 195.3 13.4 156 201-389 9-164 (165)
90 3ui2_A Signal recognition part 99.9 2.6E-25 9E-30 208.0 14.2 144 232-424 42-186 (244)
91 1awc_B Protein (GA binding pro 99.9 8.3E-25 2.8E-29 189.2 15.3 123 231-384 30-152 (153)
92 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-24 4.2E-29 188.6 15.3 151 203-387 5-155 (156)
93 3deo_A Signal recognition part 99.9 1.3E-24 4.4E-29 194.0 14.2 112 198-312 42-154 (183)
94 2b0o_E UPLC1; arfgap, structur 99.9 9.6E-25 3.3E-29 210.3 13.4 138 268-411 151-299 (301)
95 3t8k_A Uncharacterized protein 99.9 7.7E-25 2.6E-29 195.4 7.7 137 233-395 36-184 (186)
96 3aaa_C Myotrophin, protein V-1 99.9 3.4E-24 1.2E-28 177.9 10.9 109 266-405 5-113 (123)
97 3aaa_C Myotrophin, protein V-1 99.9 7E-24 2.4E-28 176.1 12.4 118 232-380 4-121 (123)
98 3c5r_A BARD-1, BRCA1-associate 99.9 1.5E-24 5.1E-29 183.8 7.7 128 231-389 6-133 (137)
99 3ehr_A Osteoclast-stimulating 99.9 4.5E-24 1.5E-28 196.7 9.1 136 232-398 70-206 (222)
100 3ehr_A Osteoclast-stimulating 99.9 1.1E-23 3.7E-28 194.1 8.5 139 192-332 65-204 (222)
101 1dcq_A PYK2-associated protein 99.9 1.6E-21 5.3E-26 185.7 21.5 125 301-425 130-265 (278)
102 3lvq_E ARF-GAP with SH3 domain 99.9 1.6E-22 5.4E-27 209.1 15.7 122 237-358 134-266 (497)
103 2b0o_E UPLC1; arfgap, structur 99.9 2E-22 6.9E-27 194.1 15.1 140 298-457 148-298 (301)
104 1dcq_A PYK2-associated protein 99.9 9.9E-22 3.4E-26 187.0 17.8 129 231-390 126-263 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.9E-22 1E-26 157.3 11.6 92 235-326 2-93 (93)
106 3jue_A Arfgap with coiled-coil 99.9 4.8E-22 1.6E-26 195.8 14.7 144 234-408 198-347 (368)
107 3jue_A Arfgap with coiled-coil 99.9 1.3E-21 4.5E-26 192.7 13.5 128 267-425 198-328 (368)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.8E-21 9.4E-26 151.7 12.4 92 332-423 2-93 (93)
109 3ui2_A Signal recognition part 99.8 2.3E-21 7.8E-26 181.2 11.5 113 266-410 43-156 (244)
110 3lvq_E ARF-GAP with SH3 domain 99.8 7.8E-21 2.7E-25 196.4 15.1 134 268-407 132-276 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.8 2.1E-21 7.3E-26 158.9 7.8 109 263-402 4-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-20 3.6E-25 154.7 5.6 101 231-331 5-105 (115)
113 2ptm_A Hyperpolarization-activ 99.8 3.2E-19 1.1E-23 161.0 13.4 145 62-210 50-194 (198)
114 2zgd_A 3 repeat synthetic anky 99.8 8.3E-19 2.8E-23 142.1 12.0 93 228-320 17-109 (110)
115 3bpz_A Potassium/sodium hyperp 99.8 2.9E-18 9.8E-23 155.2 13.7 143 62-209 51-193 (202)
116 3mdp_A Cyclic nucleotide-bindi 99.8 1E-18 3.5E-23 148.5 9.7 128 82-209 5-135 (142)
117 4f8a_A Potassium voltage-gated 99.8 2.6E-18 8.8E-23 149.3 12.3 139 64-207 8-148 (160)
118 3idb_B CAMP-dependent protein 99.8 2.7E-18 9.3E-23 149.4 12.4 129 76-205 31-159 (161)
119 2pqq_A Putative transcriptiona 99.8 5.3E-18 1.8E-22 145.3 12.4 128 82-209 4-131 (149)
120 3ukn_A Novel protein similar t 99.8 2.8E-18 9.6E-23 156.5 11.0 142 64-211 57-200 (212)
121 3gyd_A CNMP-BD protein, cyclic 99.7 6.3E-18 2.1E-22 150.9 11.7 132 77-208 33-164 (187)
122 2zgd_A 3 repeat synthetic anky 99.7 9.2E-18 3.2E-22 135.9 11.6 87 331-417 23-109 (110)
123 2z69_A DNR protein; beta barre 99.7 8.2E-18 2.8E-22 145.0 11.1 130 80-209 9-139 (154)
124 3dn7_A Cyclic nucleotide bindi 99.7 2.3E-17 8E-22 148.2 11.0 129 81-209 5-134 (194)
125 4ev0_A Transcription regulator 99.7 3.8E-17 1.3E-21 149.4 10.2 126 85-210 1-126 (216)
126 3e97_A Transcriptional regulat 99.7 4.2E-17 1.5E-21 150.8 10.6 129 82-210 5-133 (231)
127 3ocp_A PRKG1 protein; serine/t 99.7 9.6E-17 3.3E-21 135.8 11.7 123 75-202 15-137 (139)
128 3fx3_A Cyclic nucleotide-bindi 99.7 3.8E-17 1.3E-21 151.8 9.1 132 79-210 7-138 (237)
129 3d0s_A Transcriptional regulat 99.7 3.2E-17 1.1E-21 151.2 8.4 129 81-209 4-132 (227)
130 1zyb_A Transcription regulator 99.7 1E-16 3.6E-21 148.3 11.7 132 79-210 14-148 (232)
131 3dv8_A Transcriptional regulat 99.7 9.5E-17 3.2E-21 147.2 11.3 127 83-209 3-131 (220)
132 1wgp_A Probable cyclic nucleot 99.7 5.7E-17 2E-21 136.8 8.2 119 83-202 6-135 (137)
133 3dkw_A DNR protein; CRP-FNR, H 99.7 5.4E-17 1.9E-21 149.6 7.0 130 81-210 7-137 (227)
134 3pna_A CAMP-dependent protein 99.7 3.2E-16 1.1E-20 135.1 11.4 120 78-202 33-152 (154)
135 3iwz_A CAP-like, catabolite ac 99.7 2.8E-16 9.5E-21 145.1 11.7 128 82-209 10-143 (230)
136 1vp6_A CNBD, cyclic-nucleotide 99.7 1.8E-16 6.3E-21 133.8 8.8 125 80-211 8-132 (138)
137 4ava_A Lysine acetyltransferas 99.6 4.4E-16 1.5E-20 152.3 11.2 128 81-210 11-138 (333)
138 2gau_A Transcriptional regulat 99.6 2.5E-16 8.5E-21 145.7 8.4 125 86-210 13-137 (232)
139 3shr_A CGMP-dependent protein 99.6 8.1E-16 2.8E-20 148.1 10.8 136 77-212 151-287 (299)
140 3ryp_A Catabolite gene activat 99.6 1.4E-15 4.8E-20 138.3 10.9 122 89-210 2-124 (210)
141 3tnp_B CAMP-dependent protein 99.6 1.5E-15 5.1E-20 152.6 11.7 130 77-207 139-268 (416)
142 2oz6_A Virulence factor regula 99.6 3.8E-15 1.3E-19 135.1 11.6 116 94-209 1-120 (207)
143 2d93_A RAP guanine nucleotide 99.6 1.1E-15 3.8E-20 128.3 7.3 115 80-199 13-129 (134)
144 2qcs_B CAMP-dependent protein 99.6 1E-14 3.5E-19 139.7 14.8 131 77-207 151-282 (291)
145 3shr_A CGMP-dependent protein 99.6 9.5E-15 3.3E-19 140.5 13.7 125 75-204 31-155 (299)
146 1o5l_A Transcriptional regulat 99.6 2.7E-15 9.3E-20 136.7 7.1 124 87-210 3-127 (213)
147 3kcc_A Catabolite gene activat 99.6 8.1E-15 2.8E-19 137.9 10.6 120 91-210 54-174 (260)
148 1o7f_A CAMP-dependent RAP1 gua 99.6 2.1E-14 7.3E-19 147.2 14.3 136 75-211 34-171 (469)
149 2qcs_B CAMP-dependent protein 99.6 1.6E-14 5.3E-19 138.5 12.4 127 78-209 34-160 (291)
150 3beh_A MLL3241 protein; transm 99.6 7.3E-16 2.5E-20 151.9 3.2 123 82-211 227-349 (355)
151 3of1_A CAMP-dependent protein 99.6 4.6E-15 1.6E-19 138.3 8.4 122 81-207 5-126 (246)
152 2fmy_A COOA, carbon monoxide o 99.5 2.7E-15 9.2E-20 137.5 5.7 120 83-210 4-123 (220)
153 3tnp_B CAMP-dependent protein 99.5 9.5E-15 3.3E-19 146.7 9.6 129 79-207 263-397 (416)
154 1ft9_A Carbon monoxide oxidati 99.5 2.8E-15 9.5E-20 137.6 5.0 119 84-210 1-119 (222)
155 4din_B CAMP-dependent protein 99.5 1.2E-14 3.9E-19 144.6 9.8 130 77-206 242-372 (381)
156 4din_B CAMP-dependent protein 99.5 1.7E-14 5.9E-19 143.3 10.4 127 78-209 125-251 (381)
157 3of1_A CAMP-dependent protein 99.5 2.6E-14 8.8E-19 133.2 9.6 119 77-199 119-237 (246)
158 3e6c_C CPRK, cyclic nucleotide 99.5 1.9E-14 6.6E-19 134.5 7.8 123 85-210 11-133 (250)
159 2bgc_A PRFA; bacterial infecti 99.5 1.8E-13 6.1E-18 126.9 11.3 118 92-210 2-124 (238)
160 3la7_A Global nitrogen regulat 99.4 2.4E-13 8.2E-18 126.5 9.2 114 96-209 30-148 (243)
161 1o7f_A CAMP-dependent RAP1 gua 99.4 9.3E-13 3.2E-17 135.0 13.7 121 80-204 334-456 (469)
162 4f7z_A RAP guanine nucleotide 99.4 1.3E-12 4.4E-17 146.0 13.8 120 80-200 39-160 (999)
163 3cf6_E RAP guanine nucleotide 99.4 1.8E-12 6.3E-17 137.4 10.8 121 79-203 28-150 (694)
164 3b02_A Transcriptional regulat 99.3 2.4E-12 8.2E-17 115.3 9.8 81 109-190 2-82 (195)
165 2zcw_A TTHA1359, transcription 99.2 9.3E-12 3.2E-16 112.1 7.8 86 103-190 2-89 (202)
166 4f7z_A RAP guanine nucleotide 99.2 3.4E-11 1.2E-15 134.5 12.3 115 79-197 333-449 (999)
167 1orq_C Potassium channel; volt 96.6 0.00075 2.6E-08 61.0 2.1 52 8-74 36-87 (223)
168 2r9r_B Paddle chimera voltage 93.1 0.013 4.6E-07 59.6 -0.7 49 11-73 239-288 (514)
169 1ors_C Potassium channel; volt 89.3 0.12 4E-06 42.0 1.3 45 13-72 39-83 (132)
170 2dnf_A Doublecortin domain-con 85.4 0.58 2E-05 36.1 3.2 47 468-515 40-88 (108)
171 2kyh_A KVAP, voltage-gated pot 82.0 0.47 1.6E-05 39.1 1.4 46 13-73 54-99 (147)
172 3rns_A Cupin 2 conserved barre 72.2 13 0.00046 32.7 8.3 70 106-186 39-108 (227)
173 4g26_A Pentatricopeptide repea 71.0 8.9 0.0003 38.6 7.6 143 236-385 30-198 (501)
174 2ozj_A Cupin 2, conserved barr 70.7 17 0.00058 27.7 7.7 64 110-184 44-107 (114)
175 3fjs_A Uncharacterized protein 70.3 19 0.00063 27.7 7.8 47 107-159 39-85 (114)
176 3lwc_A Uncharacterized protein 69.5 34 0.0012 26.5 9.2 71 108-189 44-114 (119)
177 1yhf_A Hypothetical protein SP 58.5 43 0.0015 25.2 7.9 47 107-159 43-89 (115)
178 1dgw_A Canavalin; duplicated s 55.2 14 0.00048 31.2 4.8 52 106-159 43-94 (178)
179 2eel_A Cell death activator CI 54.3 6.1 0.00021 29.1 1.9 56 459-514 19-79 (91)
180 1ibx_B Chimera of IGG binding 52.7 9.5 0.00033 30.5 2.9 55 461-515 75-136 (145)
181 1fxz_A Glycinin G1; proglycini 51.1 26 0.00089 34.8 6.6 52 108-159 342-394 (476)
182 3c3v_A Arachin ARAH3 isoform; 50.9 22 0.00074 35.6 6.0 56 104-159 372-428 (510)
183 3fz3_A Prunin; TREE NUT allerg 49.9 26 0.00088 35.1 6.2 58 102-159 392-450 (531)
184 2pfw_A Cupin 2, conserved barr 49.4 71 0.0024 24.0 7.8 46 107-158 37-82 (116)
185 2d5f_A Glycinin A3B4 subunit; 49.4 26 0.00088 35.0 6.2 59 101-159 364-423 (493)
186 3rvy_A ION transport protein; 48.0 6.2 0.00021 36.3 1.5 42 13-70 63-105 (285)
187 2vqa_A SLL1358 protein, MNCA; 47.0 34 0.0012 32.4 6.7 51 108-159 56-107 (361)
188 4e2g_A Cupin 2 conserved barre 46.5 32 0.0011 26.6 5.4 47 106-158 43-89 (126)
189 3ibm_A Cupin 2, conserved barr 45.9 53 0.0018 27.1 6.9 46 108-159 60-105 (167)
190 1f2r_I Inhibitor of caspase-ac 44.1 19 0.00066 26.9 3.3 54 462-515 31-91 (100)
191 3rns_A Cupin 2 conserved barre 43.6 56 0.0019 28.6 7.1 48 106-159 155-202 (227)
192 2gu9_A Tetracenomycin polyketi 43.6 40 0.0014 25.1 5.5 47 107-159 24-73 (113)
193 2xp1_A SPT6; transcription, IW 43.5 89 0.0031 26.2 7.8 36 86-127 12-47 (178)
194 1v70_A Probable antibiotics sy 43.3 49 0.0017 24.1 5.8 46 108-159 32-78 (105)
195 2pyt_A Ethanolamine utilizatio 43.0 74 0.0025 25.1 7.0 44 108-159 61-104 (133)
196 1j58_A YVRK protein; cupin, de 42.9 34 0.0012 32.8 6.0 52 106-158 81-132 (385)
197 4g26_A Pentatricopeptide repea 42.6 68 0.0023 32.0 8.3 101 249-353 91-199 (501)
198 2e9q_A 11S globulin subunit be 42.6 38 0.0013 33.4 6.2 56 104-159 322-378 (459)
199 1fi2_A Oxalate oxidase, germin 42.5 53 0.0018 28.1 6.6 54 106-159 74-130 (201)
200 2i45_A Hypothetical protein; n 41.8 53 0.0018 24.4 5.8 66 112-188 36-102 (107)
201 3es1_A Cupin 2, conserved barr 41.3 28 0.00096 29.2 4.4 47 107-158 82-128 (172)
202 2vqa_A SLL1358 protein, MNCA; 41.2 50 0.0017 31.2 6.8 51 108-159 238-289 (361)
203 1sfn_A Conserved hypothetical 38.4 71 0.0024 28.3 7.0 49 105-159 166-215 (246)
204 3es4_A Uncharacterized protein 38.0 38 0.0013 26.2 4.3 44 110-159 48-91 (116)
205 2fqp_A Hypothetical protein BP 37.8 28 0.00096 25.5 3.6 48 108-159 22-70 (97)
206 1o5u_A Novel thermotoga mariti 37.1 1.3E+02 0.0043 22.4 8.8 45 108-159 35-79 (101)
207 3h8u_A Uncharacterized conserv 36.6 54 0.0018 25.2 5.2 47 107-158 42-89 (125)
208 1zvf_A 3-hydroxyanthranilate 3 36.1 56 0.0019 27.3 5.2 63 122-190 52-117 (176)
209 2cav_A Protein (canavalin); vi 35.6 32 0.0011 33.9 4.4 52 106-159 88-139 (445)
210 3bcw_A Uncharacterized protein 35.1 38 0.0013 26.5 4.0 44 110-159 55-98 (123)
211 1d4b_A CIDE B, human cell deat 34.5 7.8 0.00027 30.2 -0.2 56 459-514 45-104 (122)
212 4axo_A EUTQ, ethanolamine util 33.7 1.4E+02 0.0049 24.1 7.4 54 123-187 83-136 (151)
213 3d0j_A Uncharacterized protein 33.6 54 0.0019 26.2 4.6 65 118-187 44-110 (140)
214 3kgl_A Cruciferin; 11S SEED gl 33.6 57 0.0019 32.2 5.8 37 123-159 343-379 (466)
215 1sfn_A Conserved hypothetical 33.2 1.7E+02 0.0057 25.8 8.6 65 108-185 54-118 (246)
216 3ksc_A LEGA class, prolegumin; 32.9 58 0.002 32.4 5.8 54 106-159 360-414 (496)
217 2bnm_A Epoxidase; oxidoreducta 32.8 66 0.0023 27.2 5.6 48 110-159 123-173 (198)
218 2f4p_A Hypothetical protein TM 32.5 76 0.0026 25.4 5.6 47 108-159 52-98 (147)
219 4b29_A Dimethylsulfoniopropion 32.3 62 0.0021 28.1 5.1 43 112-159 140-182 (217)
220 2oa2_A BH2720 protein; 1017534 32.1 1.1E+02 0.0038 24.3 6.6 50 109-158 48-98 (148)
221 3kgz_A Cupin 2 conserved barre 32.0 43 0.0015 27.4 4.0 43 110-158 50-92 (156)
222 3i7d_A Sugar phosphate isomera 31.8 59 0.002 26.7 4.9 46 108-159 47-94 (163)
223 1yfu_A 3-hydroxyanthranilate-3 31.4 77 0.0026 26.4 5.3 63 122-191 53-116 (174)
224 2vpv_A Protein MIF2, MIF2P; nu 31.3 50 0.0017 27.4 4.2 31 123-159 109-139 (166)
225 1o4t_A Putative oxalate decarb 31.1 74 0.0025 24.9 5.3 45 108-158 61-106 (133)
226 3qac_A 11S globulin SEED stora 30.7 67 0.0023 31.6 5.8 37 123-159 343-379 (465)
227 2phl_A Phaseolin; plant SEED s 30.1 44 0.0015 32.2 4.3 50 106-157 54-103 (397)
228 3h7j_A Bacilysin biosynthesis 30.0 1E+02 0.0035 27.1 6.6 46 106-157 36-81 (243)
229 1y9q_A Transcriptional regulat 29.8 1.2E+02 0.0042 25.3 6.8 44 110-159 110-155 (192)
230 2e9q_A 11S globulin subunit be 29.7 56 0.0019 32.2 5.0 62 98-159 57-138 (459)
231 3d82_A Cupin 2, conserved barr 29.6 1.6E+02 0.0053 21.1 7.1 50 125-185 51-100 (102)
232 3jzv_A Uncharacterized protein 29.3 42 0.0014 27.8 3.5 44 110-159 59-102 (166)
233 3l2h_A Putative sugar phosphat 28.7 54 0.0018 26.7 4.2 45 108-158 50-96 (162)
234 1fxz_A Glycinin G1; proglycini 28.3 71 0.0024 31.6 5.5 62 98-159 42-124 (476)
235 1uij_A Beta subunit of beta co 28.2 61 0.0021 31.5 5.0 52 106-159 51-102 (416)
236 2b8m_A Hypothetical protein MJ 28.2 53 0.0018 24.8 3.8 45 109-158 32-76 (117)
237 3h7j_A Bacilysin biosynthesis 28.1 1E+02 0.0035 27.1 6.2 45 109-159 150-195 (243)
238 2ea7_A 7S globulin-1; beta bar 27.9 66 0.0022 31.5 5.2 52 106-159 63-114 (434)
239 4i4a_A Similar to unknown prot 27.5 76 0.0026 24.3 4.7 45 109-159 39-83 (128)
240 1j58_A YVRK protein; cupin, de 27.2 93 0.0032 29.6 6.2 50 109-159 262-312 (385)
241 1lr5_A Auxin binding protein 1 27.2 67 0.0023 26.2 4.5 52 108-159 45-99 (163)
242 4dxw_A Navrh, ION transport pr 26.6 24 0.00082 31.0 1.7 42 13-68 44-86 (229)
243 3cew_A Uncharacterized cupin p 26.2 1.1E+02 0.0036 23.4 5.3 46 108-159 30-77 (125)
244 1vj2_A Novel manganese-contain 26.0 66 0.0022 24.8 4.0 45 109-159 53-97 (126)
245 3bu7_A Gentisate 1,2-dioxygena 25.9 57 0.0019 31.4 4.2 78 107-193 297-375 (394)
246 1gp8_A Protein (scaffolding pr 25.4 55 0.0019 19.5 2.4 19 237-255 15-33 (40)
247 2q1z_B Anti-sigma factor CHRR, 25.0 87 0.003 26.6 4.9 44 106-159 127-170 (195)
248 3zrh_A Ubiquitin thioesterase 24.9 2E+02 0.0068 27.6 7.5 54 236-289 23-90 (454)
249 4e2q_A Ureidoglycine aminohydr 24.3 1.1E+02 0.0039 27.5 5.7 68 108-186 74-142 (266)
250 2phl_A Phaseolin; plant SEED s 24.3 78 0.0027 30.5 4.8 37 123-159 259-301 (397)
251 2o1q_A Putative acetyl/propion 24.0 72 0.0025 25.6 4.0 71 106-184 46-116 (145)
252 1txj_A Translationally control 23.4 46 0.0016 27.7 2.6 67 24-111 67-133 (171)
253 2qnk_A 3-hydroxyanthranilate 3 22.8 1E+02 0.0035 27.9 4.9 42 114-158 39-83 (286)
254 1sq4_A GLXB, glyoxylate-induce 22.6 99 0.0034 28.0 5.1 49 104-158 191-240 (278)
255 3nw4_A Gentisate 1,2-dioxygena 22.6 1.6E+02 0.0056 27.9 6.6 76 108-194 283-358 (368)
256 3s7i_A Allergen ARA H 1, clone 22.1 96 0.0033 30.1 5.0 50 108-159 48-97 (418)
257 1rc6_A Hypothetical protein YL 21.1 93 0.0032 27.8 4.5 68 109-185 64-133 (261)
258 1sef_A Conserved hypothetical 20.5 1.1E+02 0.0039 27.5 5.0 47 107-159 185-232 (274)
259 1x82_A Glucose-6-phosphate iso 20.0 1.6E+02 0.0055 24.7 5.6 33 125-158 97-129 (190)
No 1
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=304.31 Aligned_cols=208 Identities=25% Similarity=0.261 Sum_probs=193.6
Q ss_pred hhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCC
Q 010168 234 ELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 313 (516)
Q Consensus 234 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 313 (516)
.|.||||.||..|+.+++++|++.|++++.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCcC-CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCC
Q 010168 314 DGVTSLLVKEGASLNVD-DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF 392 (516)
Q Consensus 314 ~~~v~~Ll~~g~~~~~~-~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 392 (516)
.+++++|+++|++++.. ++.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 82 WDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 99999999999999864 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCccc
Q 010168 393 TKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKV 456 (516)
Q Consensus 393 ~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (516)
. +..|+||||+|+..|+.+++++|+++|++.. .++..+.+|+|.+...+
T Consensus 162 ~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~--------------~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 162 Q-GKGQDSPLHAVARTASEELACLLMDFGADTQ--------------AKNAEGKRPVELVPPES 210 (261)
T ss_dssp C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT--------------CCCTTSCCGGGGSCTTC
T ss_pred C-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC--------------CcCCCCCChhhhccccc
Confidence 5 8899999999999999999999999999643 33455668888887544
No 2
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=305.41 Aligned_cols=212 Identities=25% Similarity=0.251 Sum_probs=198.0
Q ss_pred cccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHH
Q 010168 228 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 307 (516)
Q Consensus 228 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~ 307 (516)
....+..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~ 131 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN 131 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHcCCCCCcC-CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHH
Q 010168 308 AIKCGHDGVTSLLVKEGASLNVD-DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLE 386 (516)
Q Consensus 308 A~~~~~~~~v~~Ll~~g~~~~~~-~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 386 (516)
|+..|+.+++++|+++|++++.. .+.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 211 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 211 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999999998854 47799999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCc
Q 010168 387 AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDE 454 (516)
Q Consensus 387 ~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (516)
+|++++. +..|+||||+|+..|+.+++++|+++|++.. .....+.+|+|.+..
T Consensus 212 ~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~--------------~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 212 SGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQ--------------AKNAEGKRPVELVPP 264 (285)
T ss_dssp TTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--------------CCCTTSCCGGGGSCT
T ss_pred CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--------------CcCCCCCCHHHHhcC
Confidence 9999995 8899999999999999999999999998543 334456689999873
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2e-38 Score=296.11 Aligned_cols=217 Identities=24% Similarity=0.264 Sum_probs=202.5
Q ss_pred ccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHH
Q 010168 227 HIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLL 306 (516)
Q Consensus 227 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~ 306 (516)
+++..+..|.||||.||..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 34556677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHcC-CCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHH
Q 010168 307 EAIKCGHDGVTSLLVKEG-ASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKL 383 (516)
Q Consensus 307 ~A~~~~~~~~v~~Ll~~g-~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 383 (516)
+|+..|+.+++++|+++| .+++..+ +.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEI 162 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHH
Confidence 999999999999999998 7776644 6799999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 384 LLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 384 Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.. .+...+.+|+|.+...++
T Consensus 163 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~--------------~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 163 LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT--------------LKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT--------------CCCTTSCCHHHHSCTTCH
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC--------------ccCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998543 334556789999988887
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.9e-39 Score=307.24 Aligned_cols=214 Identities=23% Similarity=0.237 Sum_probs=186.1
Q ss_pred ccchhhhHHHHHHHHhcCCHHHHHHHHHcCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHH
Q 010168 229 GKHEAELALRVNSAAYHGDLYQLKGLIRAGAD---PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPL 305 (516)
Q Consensus 229 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL 305 (516)
+..+..|.||||+||..|+.+++++|++.|++ ++.++..|+||||+||..|+.+++++|+++|++++.+|..|.|||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 45667899999999999999999999999988 789999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCCC-----------------------------------------------CCc--CCcchHH
Q 010168 306 LEAIKCGHDGVTSLLVKEGAS-----------------------------------------------LNV--DDAGSFL 336 (516)
Q Consensus 306 ~~A~~~~~~~~v~~Ll~~g~~-----------------------------------------------~~~--~~~~~~l 336 (516)
|+|+..|+.+++++|+++|++ ++. ..+.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 999999999999999998865 222 3467999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 010168 337 CTAVARGDSDFLKRVLSNGVDPSSRDYD-HRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIK 415 (516)
Q Consensus 337 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~ 415 (516)
|+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 9999999999999999999999999854 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcccCccccccccCccccccCCCcceeecCCCCCCccc
Q 010168 416 LLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKV 456 (516)
Q Consensus 416 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (516)
+|+++|++.. .....+.+|++.+....
T Consensus 243 ~Ll~~ga~~~--------------~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 243 LLRAHGAPEP--------------EDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTTCCCC--------------CCC--------------
T ss_pred HHHHcCCCcC--------------cCCCcccccccccCCcc
Confidence 9999999643 34455667777765433
No 5
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.3e-38 Score=296.36 Aligned_cols=215 Identities=20% Similarity=0.226 Sum_probs=196.9
Q ss_pred ccchhhhHHHHHHHHhcCCHHHHHHHHH----cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChH
Q 010168 229 GKHEAELALRVNSAAYHGDLYQLKGLIR----AGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTP 304 (516)
Q Consensus 229 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tp 304 (516)
+..+..|.||||+||..|+.+++++|++ .|++++..|..|+||||+|+..|+.+++++|+++|++++..|..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 4556789999999999999999999997 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHcCC----CCCcC--CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhCh
Q 010168 305 LLEAIKCGHDGVTSLLVKEGA----SLNVD--DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRD-YDHRTPLHVAASEGL 377 (516)
Q Consensus 305 L~~A~~~~~~~~v~~Ll~~g~----~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~ 377 (516)
||+|+..|+.+++++|+++++ +++.. .+.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 999999999999999999987 55554 47799999999999999999999999999998 889999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 378 YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 378 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.. .....+.+|+|.+...++
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--------------~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS--------------LKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT--------------CCCTTSCCTTTTCSSHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC--------------CcCCCCCCHHHHHHhcCc
Confidence 999999999999999999999999999999999999999999998643 234456799999988777
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.3e-39 Score=302.81 Aligned_cols=189 Identities=29% Similarity=0.339 Sum_probs=114.5
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcCCCCCCChHHHHHHH
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~tpL~~A~~ 310 (516)
+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+.
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 4455566666666666666666666666666666666666666666666666666666554 555666666666666666
Q ss_pred cCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcC
Q 010168 311 CGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG 388 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 388 (516)
.|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp HTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 666666666666666555443 445666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010168 389 ASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 420 (516)
Q Consensus 389 ~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~ 420 (516)
++++.+|..|+||+++|+.+|+.+++++|...
T Consensus 214 a~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 214 ANRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred CCccccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 66666666666666666666666666666543
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.9e-38 Score=291.74 Aligned_cols=220 Identities=25% Similarity=0.344 Sum_probs=196.7
Q ss_pred hhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 010168 203 VLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYED 282 (516)
Q Consensus 203 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~ 282 (516)
.+..+...+........+..... .....+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 87 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDE 87 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred hHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHH
Confidence 34444444444333333332222 23556677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 010168 283 ITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSS 360 (516)
Q Consensus 283 ~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~ 360 (516)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.
T Consensus 88 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 88 IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc
Confidence 9999999999999999999999999999999999999999999998765 67999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccC
Q 010168 361 RDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECT 423 (516)
Q Consensus 361 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~ 423 (516)
+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..++.+++++|+++|++
T Consensus 168 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 168 QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 999999999999999999999999999999999999999999999999999999999998874
No 8
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.2e-37 Score=286.30 Aligned_cols=195 Identities=28% Similarity=0.334 Sum_probs=187.8
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcCCCCCCChHHHHHH
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAI 309 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~tpL~~A~ 309 (516)
.+..|.||||+||..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++++ +++..+..|.||||+|+
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence 36678999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred HcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHc
Q 010168 310 KCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEA 387 (516)
Q Consensus 310 ~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 387 (516)
..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999998765 67999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 388 GASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 388 g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
|++++.+|..|.||+++|+..|+.+++++|+++|+...
T Consensus 181 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 181 FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999998654
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-37 Score=294.13 Aligned_cols=200 Identities=26% Similarity=0.280 Sum_probs=158.4
Q ss_pred cchhhhHHHHHHHHhcC-------------CHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q 010168 230 KHEAELALRVNSAAYHG-------------DLYQLKGLIRAGADPNK-TDYDGRSPLHLATSRGYEDITLFLIQKGVDIN 295 (516)
Q Consensus 230 ~~~~~~~t~L~~A~~~g-------------~~~~v~~Ll~~g~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~ 295 (516)
..+..|.||||+|+..| +.+++++|++.|++++. .|..|+||||+|+..|+.+++++|+++|++++
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 84 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN 84 (253)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 45667999999999987 89999999999999865 58999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHcCChHHHHHHHHcCC-CCCcC--CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 010168 296 IKDKFGNTPLLEAIKCGHDGVTSLLVKEGA-SLNVD--DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVA 372 (516)
Q Consensus 296 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~-~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 372 (516)
.+|..|.||||+|+..|+.+++++|+++++ +++.. .+.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA 164 (253)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 999999999999999999999999999987 66664 477999999999999999999999999999999999999999
Q ss_pred HHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcccccc
Q 010168 373 ASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFH 429 (516)
Q Consensus 373 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~ 429 (516)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++......
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 999999999999999999999999999999999999999999999999998766544
No 10
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.3e-38 Score=312.32 Aligned_cols=267 Identities=17% Similarity=0.130 Sum_probs=205.7
Q ss_pred cchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 010168 199 DGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSR 278 (516)
Q Consensus 199 ~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~ 278 (516)
.+...+..++..+.......++.... ..+..+..|.||||+||..|+.+++++|++.|++++. .+|+||||+|+..
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~ 94 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMA 94 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHc
Confidence 34556666666666555555554433 2344555677777777777777777777777775543 4677777777777
Q ss_pred CCHHHHHHHHHc----CCCCcC-----------------CCCCCChHHHHHHHcC--ChHHHHHHHHcCCCCCcCC--cc
Q 010168 279 GYEDITLFLIQK----GVDINI-----------------KDKFGNTPLLEAIKCG--HDGVTSLLVKEGASLNVDD--AG 333 (516)
Q Consensus 279 g~~~~v~~Ll~~----g~~~~~-----------------~d~~g~tpL~~A~~~~--~~~~v~~Ll~~g~~~~~~~--~~ 333 (516)
|+.+++++|+++ |++++. .|..|.||||+|+..| +.+++++|+++|++++..+ +.
T Consensus 95 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 95 NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 777777777776 666665 7888999999999999 9999999999999988765 67
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 010168 334 SFLCTAVARGDSDFLKRVLSNGVD-----PSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMC 408 (516)
Q Consensus 334 ~~l~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~ 408 (516)
||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 999999999999999999999988 999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCcHHHHHHHHhhh
Q 010168 409 GNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVDK 480 (516)
Q Consensus 409 ~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~ 480 (516)
|+.+++++|+++|++........ .......+...++++++.++..++ ...+..++..+.+.
T Consensus 255 g~~~~v~~Ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aa~~~~---------~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 255 AMVLLTKELLQKTDVFLIQACPY--HNGTTVLPDRVVWLDFVPAAADPS---------KQEVLQLLQEKLDE 315 (364)
T ss_dssp CCHHHHHHHHHHSCHHHHHTCTT--BSSSSBCGGGCCCCTTSCSSCCHH---------HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCchhhhcCcc--cCcccccccccccccchhhhhccC---------HHHHHHHHHHHHHH
Confidence 99999999999988753322111 111233455667788988888887 44455555554443
No 11
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-37 Score=298.28 Aligned_cols=255 Identities=23% Similarity=0.254 Sum_probs=217.7
Q ss_pred hhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 010168 201 RKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGY 280 (516)
Q Consensus 201 ~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~ 280 (516)
...+..++..+.......++......+. ..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNF-QEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccc-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC
Confidence 3444555555555444444444433322 225668899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcC------------CcchHHHHHHHcCCHHHH
Q 010168 281 EDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD------------DAGSFLCTAVARGDSDFL 348 (516)
Q Consensus 281 ~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~------------~~~~~l~~A~~~~~~~~v 348 (516)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. .+.+|||+|+..|+.+++
T Consensus 85 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 164 (285)
T 1wdy_A 85 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 164 (285)
T ss_dssp HHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999999999999998854 467999999999999999
Q ss_pred HHHHHC-CCCCCCCCCCCCcHHHHHHHhCh----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-ccc
Q 010168 349 KRVLSN-GVDPSSRDYDHRTPLHVAASEGL----YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED-AEC 422 (516)
Q Consensus 349 ~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~-~~~ 422 (516)
++|+++ |++++..+..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|+
T Consensus 165 ~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~ 244 (285)
T 1wdy_A 165 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244 (285)
T ss_dssp HHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC
T ss_pred HHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCC
Confidence 999987 99999999999999999999999 999999999999999999999999999999999999999999 777
Q ss_pred CccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCcHHHHHHHHhh
Q 010168 423 TQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVD 479 (516)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~ 479 (516)
+.. .....+.+|+|.+...++ .+.++-|++.|++
T Consensus 245 ~~~--------------~~~~~g~t~l~~A~~~~~---------~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 245 EIN--------------DTDSDGKTALLLAVELKL---------KKIAELLCKRGAS 278 (285)
T ss_dssp CTT--------------CCCTTSCCHHHHHHHTTC---------HHHHHHHHHHSSC
T ss_pred Ccc--------------ccCCCCCcHHHHHHHcCc---------HHHHHHHHHcCCC
Confidence 533 233456689999888877 5666777766544
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.8e-37 Score=306.96 Aligned_cols=227 Identities=25% Similarity=0.284 Sum_probs=202.3
Q ss_pred cchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 010168 199 DGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSR 278 (516)
Q Consensus 199 ~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~ 278 (516)
.+...+..++..+........+. ......+..+..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~-~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLT-PLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCC-TTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred ccchhHHHHHHcCCHHHHHHHHH-hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 34455556665555544433333 33445566778899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcC----------------------------
Q 010168 279 GYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD---------------------------- 330 (516)
Q Consensus 279 g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~---------------------------- 330 (516)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 102 g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~ 181 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS 181 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccH
Confidence 9999999999999999999999999999999999999999999999987642
Q ss_pred ----------------------------CcchHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHH
Q 010168 331 ----------------------------DAGSFLCTAVAR---GDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYL 379 (516)
Q Consensus 331 ----------------------------~~~~~l~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 379 (516)
.+.||||+|+.. +..+++++|+++|++++.++..|+||||+|+..|+.+
T Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 261 (351)
T 3utm_A 182 LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHND 261 (351)
T ss_dssp HHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHH
Confidence 356899999999 5589999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccc
Q 010168 380 MAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLS 426 (516)
Q Consensus 380 ~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~ 426 (516)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 262 ~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 262 VMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999996543
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9.7e-38 Score=290.53 Aligned_cols=192 Identities=20% Similarity=0.227 Sum_probs=181.8
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----cCCCCCCChHHHHH
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDI-----NIKDKFGNTPLLEA 308 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~-----~~~d~~g~tpL~~A 308 (516)
|.||||.|+..|+.++++.|++. |++++.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 68999999999999999999998 9999999999999999999999999999999999987 67788999999999
Q ss_pred HHcCChHHHHHHHHcCCCCCcC---------------CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 010168 309 IKCGHDGVTSLLVKEGASLNVD---------------DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAA 373 (516)
Q Consensus 309 ~~~~~~~~v~~Ll~~g~~~~~~---------------~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 373 (516)
+..|+.+++++|+++|++++.. .+.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 9999999999999999999875 4789999999999999999999999999999999999999999
Q ss_pred HhChHHHH----HHHHHcCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccc
Q 010168 374 SEGLYLMA----KLLLEAGASV------FTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLS 426 (516)
Q Consensus 374 ~~g~~~~v----~~Ll~~g~~~------~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~ 426 (516)
..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|+....
T Consensus 163 ~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 163 LQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp TCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred HcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 99999988 9999999988 58999999999999999999999999999986543
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=298.30 Aligned_cols=214 Identities=22% Similarity=0.251 Sum_probs=167.7
Q ss_pred cchhhhHHHHHHHHhcCCHHHHHHHHHcCCC--------CCCCCCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCcCCCCC
Q 010168 230 KHEAELALRVNSAAYHGDLYQLKGLIRAGAD--------PNKTDYDGRSPLHLATSRGYE-DITLFLIQKGVDINIKDKF 300 (516)
Q Consensus 230 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--------~~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~g~~~~~~d~~ 300 (516)
..+..+.++|+.||..|+.++|++|++.|++ ++..+..|.||||+|+..++. .++++|+++|+++|.+|.+
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 3455678999999999999999999998875 456678899999999988775 5889999999999999999
Q ss_pred CChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChH
Q 010168 301 GNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLY 378 (516)
Q Consensus 301 g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~ 378 (516)
|+||||+|+..|+.+++++|++.|++++..+ +.||++.|+..++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~ 165 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHH 165 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCG
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 9999999999999999999999999988754 67999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 379 LMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 379 ~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
++|++|+++|+++|.++..|+||||+|+..|+.+++++|+++|++... ....+.+|+|.|..+++
T Consensus 166 ~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~--------------~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 166 ELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV--------------LNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp GGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC--------------CCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--------------cCCCCCCHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999996533 33456689999876554
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=298.29 Aligned_cols=229 Identities=23% Similarity=0.299 Sum_probs=165.3
Q ss_pred chhhHHHhhhccchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHH-HHHHHHHcCCCCCCCCC
Q 010168 188 SFTNILEIYFCDGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLY-QLKGLIRAGADPNKTDY 266 (516)
Q Consensus 188 ~~~~ll~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~ 266 (516)
....++.........+++.+++....... .........+..+.||||.|+..++.+ +++.|++.|+++|.+|.
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLE------DAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------------CCCCTTCCCT
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccc------cccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC
Confidence 33445555555555555555544332111 111223455677899999999988765 78999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCC
Q 010168 267 DGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGD 344 (516)
Q Consensus 267 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~ 344 (516)
+|+||||+||..|+.++|++|+++|++++..+..|.||+|+|+..++.+++++|+++|++++..+ |.||||+|+..|+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999865 6799999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHccc
Q 010168 345 SDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN-KNLIKLLEDAEC 422 (516)
Q Consensus 345 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~-~~~v~~L~~~~~ 422 (516)
.+++++|+++|++++.++..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+.+++ .+++++|.+.++
T Consensus 165 ~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~ 243 (269)
T 4b93_B 165 HELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVA 243 (269)
T ss_dssp GGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC------
T ss_pred HHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhch
Confidence 999999999999999999999999999999999999999999999999999999999999998775 345555555444
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.3e-37 Score=291.23 Aligned_cols=226 Identities=20% Similarity=0.216 Sum_probs=197.4
Q ss_pred hccchhhhhhhhhccchhhhhhhhc--cccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 010168 197 FCDGRKVLTNLLEGKESNLRLKQLK--SDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHL 274 (516)
Q Consensus 197 ~~~~~~~l~~ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~ 274 (516)
...+...+..++..+.......++. .......+..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 3455666666666665544443332 12233445667789999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCC----CCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC---cchHHHHHHHcCCHHH
Q 010168 275 ATSRGYEDITLFLIQKGV----DINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---AGSFLCTAVARGDSDF 347 (516)
Q Consensus 275 A~~~g~~~~v~~Ll~~g~----~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~---~~~~l~~A~~~~~~~~ 347 (516)
|+..|+.+++++|+++++ +++..|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.++
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHH
Confidence 999999999999999987 889999999999999999999999999999999998755 7799999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010168 348 LKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 422 (516)
Q Consensus 348 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~ 422 (516)
+++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|.+.++
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998765
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.6e-37 Score=285.16 Aligned_cols=209 Identities=30% Similarity=0.352 Sum_probs=193.9
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCC
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGAD-PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 313 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 313 (516)
+.+|||.|+..|+.+.++.|++.+.. ++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 56899999999999999999988754 67889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCC
Q 010168 314 DGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 391 (516)
Q Consensus 314 ~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 391 (516)
.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 999999999999998755 679999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 392 FTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 392 ~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
+.+|..|+||||+|+..|+.+++++|+++|++.. .+...+.+|+|.+...++
T Consensus 166 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--------------~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 166 NIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY--------------IENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC--------------CCCTTSCCHHHHSCHHHH
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC--------------CCCCCCCCHHHHHHhhHH
Confidence 9999999999999999999999999999998643 234456688888876555
No 18
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-36 Score=282.56 Aligned_cols=207 Identities=25% Similarity=0.243 Sum_probs=188.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcC-CCCCCChHHHHHHH
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGADPN-KTDYDGRSPLHLATSRGYEDITLFLIQKG--VDINI-KDKFGNTPLLEAIK 310 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~~~~~-~d~~g~tpL~~A~~ 310 (516)
|.||||.||..|+.++++.|++.|+++. ..|..|+||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 5789999999999999999999998865 48899999999999999999999999999 55666 88999999999999
Q ss_pred cCChHHHHHHHHcC--CCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHH
Q 010168 311 CGHDGVTSLLVKEG--ASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLE 386 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g--~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 386 (516)
.|+.+++++|+++| ++++..+ +.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999998 7776644 6799999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcccCccccccccCccccccCCCcceeecCCCCCCcc
Q 010168 387 AG-ASVFTKDRWGNTPLDEGRMCGNKNLIKLLE-DAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEK 455 (516)
Q Consensus 387 ~g-~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (516)
+| ++++.+|..|+||||+|+..|+.+++++|+ +.|++... +...+.+|+|.+...
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~--------------~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL--------------VDNKGAKAEDVALNE 218 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC--------------BCTTSCBGGGGCSST
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc--------------cCCCCCcHHHHHHHH
Confidence 99 999999999999999999999999999999 88986433 334456888887543
No 19
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.5e-37 Score=295.91 Aligned_cols=197 Identities=21% Similarity=0.146 Sum_probs=184.1
Q ss_pred cccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHH
Q 010168 228 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 307 (516)
Q Consensus 228 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~ 307 (516)
.+..+..|.||||+|+..|+.+++++|++.|++++.. +|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 3566778999999999999999999999999999987 49999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHcCCCCCcCC--c-chHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 010168 308 AIKCGHDGVTSLLVKEGASLNVDD--A-GSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 384 (516)
Q Consensus 308 A~~~~~~~~v~~Ll~~g~~~~~~~--~-~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 384 (516)
|+..|+.+++++|+++|++++..+ + .||||+|+..|+.+++++|+++|++.... ..|+||||+|+..|+.+++++|
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHH
Confidence 999999999999999999998765 4 69999999999999999999999877333 2899999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHcccCcccc
Q 010168 385 LEAGASVFTKDRWGNTP-LDEGRMCGNKNLIKLLEDAECTQLSE 427 (516)
Q Consensus 385 l~~g~~~~~~~~~g~tp-l~~A~~~~~~~~v~~L~~~~~~~~~~ 427 (516)
+++|++++.+|..|+|| ||+|+..|+.+++++|+++|++....
T Consensus 181 l~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 181 LDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSA 224 (285)
T ss_dssp HHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTT
T ss_pred HHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 99999999999999998 99999999999999999999976544
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.7e-37 Score=289.86 Aligned_cols=218 Identities=22% Similarity=0.245 Sum_probs=190.8
Q ss_pred hhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 010168 201 RKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGY 280 (516)
Q Consensus 201 ~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~ 280 (516)
.+.+..+...+.......++.... ..+..+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 344555555554444444444332 345566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCC
Q 010168 281 EDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDP 358 (516)
Q Consensus 281 ~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~ 358 (516)
.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|+++
T Consensus 82 ~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 82 WDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 160 (261)
T ss_dssp HHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 9999999999999986 4569999999999999999999999999998754 679999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCc
Q 010168 359 SSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 424 (516)
Q Consensus 359 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~ 424 (516)
+. +..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.++ +++++|++.++..
T Consensus 161 ~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~ 223 (261)
T 2xai_A 161 NQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPP 223 (261)
T ss_dssp TC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCC
T ss_pred CC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCc
Confidence 96 889999999999999999999999999999999999999999999665 5899999987643
No 21
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.2e-36 Score=273.72 Aligned_cols=188 Identities=26% Similarity=0.334 Sum_probs=178.8
Q ss_pred hhHHHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcC
Q 010168 234 ELALRVNSAAYHGDLYQLKGLIRAGA-DPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 312 (516)
Q Consensus 234 ~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 312 (516)
.+.||||.|+..|+.+.++.|++.+. +++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 46789999999999999999999876 99999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHH-HcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHhCh-----HHHHHH
Q 010168 313 HDGVTSLLV-KEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNG-VDPSSRDYDHRTPLHVAASEGL-----YLMAKL 383 (516)
Q Consensus 313 ~~~~v~~Ll-~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~-----~~~v~~ 383 (516)
+.+++++|+ ..+++++..+ +.||||+|+..|+.+++++|+++| ++++.++..|+||||+|+..++ .+++++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 999999999 5666777654 679999999999999999999999 9999999999999999999987 999999
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010168 384 LLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAE 421 (516)
Q Consensus 384 Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~ 421 (516)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 164 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 164 LMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999999876
No 22
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.1e-37 Score=291.04 Aligned_cols=196 Identities=22% Similarity=0.208 Sum_probs=180.4
Q ss_pred cchhhhHHHHHHHHhcCCHHHHHHHHHcCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHH
Q 010168 230 KHEAELALRVNSAAYHGDLYQLKGLIRAGA----DPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPL 305 (516)
Q Consensus 230 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL 305 (516)
..+..|.||||+|+..|+.++++.|++.+. +++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 345678999999999999999999987754 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCCCCC------c--CCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHhC
Q 010168 306 LEAIKCGHDGVTSLLVKEGASLN------V--DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDY-DHRTPLHVAASEG 376 (516)
Q Consensus 306 ~~A~~~~~~~~v~~Ll~~g~~~~------~--~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g 376 (516)
|+|+..|+.+++++|+++|++++ . ..+.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999999999997632 2 3478999999999999999999999999999997 9999999999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 377 LYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 377 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999999999999999999999999999999999999999999765
No 23
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3e-37 Score=291.83 Aligned_cols=192 Identities=21% Similarity=0.135 Sum_probs=179.3
Q ss_pred hHHHHHHHHhcCCHH----HHHHHHHcCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcCC------
Q 010168 235 LALRVNSAAYHGDLY----QLKGLIRAGADPNK----TDYDGRSPLHLATSR---GYEDITLFLIQKGVDINIK------ 297 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~----~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~------ 297 (516)
|.||||.||..|+.+ ++++|++.|++++. .|..|+||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 689999999999997 66777789999998 899999999999999 9999999999999887643
Q ss_pred -----CCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC---------------cchHHHHHHHcCCHHHHHHHHH---C
Q 010168 298 -----DKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---------------AGSFLCTAVARGDSDFLKRVLS---N 354 (516)
Q Consensus 298 -----d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~---------------~~~~l~~A~~~~~~~~v~~Ll~---~ 354 (516)
|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|++ +
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 4789999999999999999999999999998865 7799999999999999999999 9
Q ss_pred CCCCCCCCCCCCcHHHHHHH--hChHH-------HHHHHHHcCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 010168 355 GVDPSSRDYDHRTPLHVAAS--EGLYL-------MAKLLLEAGASV-------FTKDRWGNTPLDEGRMCGNKNLIKLLE 418 (516)
Q Consensus 355 g~~~~~~~~~g~t~L~~A~~--~g~~~-------~v~~Ll~~g~~~-------~~~~~~g~tpl~~A~~~~~~~~v~~L~ 418 (516)
|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999 78888 999999999999 899999999999999999999999999
Q ss_pred HcccCccc
Q 010168 419 DAECTQLS 426 (516)
Q Consensus 419 ~~~~~~~~ 426 (516)
++|++...
T Consensus 242 ~~g~~~~~ 249 (256)
T 2etb_A 242 QREFSGAA 249 (256)
T ss_dssp HHHHHHHH
T ss_pred hCCCCCCC
Confidence 99986543
No 24
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-35 Score=283.34 Aligned_cols=225 Identities=25% Similarity=0.279 Sum_probs=202.8
Q ss_pred chhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 010168 200 GRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG 279 (516)
Q Consensus 200 ~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g 279 (516)
+...+..+...+.......++..... ....+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC
Confidence 44566666666655555555544333 3445667899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcCC----------CCCCChHHHHHHHcCChHHHHHHHHc-CCCCCcCC--cchHHHHHHHcCC--
Q 010168 280 YEDITLFLIQKGVDINIK----------DKFGNTPLLEAIKCGHDGVTSLLVKE-GASLNVDD--AGSFLCTAVARGD-- 344 (516)
Q Consensus 280 ~~~~v~~Ll~~g~~~~~~----------d~~g~tpL~~A~~~~~~~~v~~Ll~~-g~~~~~~~--~~~~l~~A~~~~~-- 344 (516)
+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++. |++++..+ +.||||+|+..++
T Consensus 117 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 196 (285)
T 1wdy_A 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT
T ss_pred CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc
Confidence 999999999999999987 78899999999999999999999997 99988754 6799999999999
Q ss_pred --HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010168 345 --SDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAE 421 (516)
Q Consensus 345 --~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~ 421 (516)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 197 ~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp THHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred cCccc
Q 010168 422 CTQLS 426 (516)
Q Consensus 422 ~~~~~ 426 (516)
++...
T Consensus 277 a~~~~ 281 (285)
T 1wdy_A 277 ASTDC 281 (285)
T ss_dssp SCSCC
T ss_pred CCCCc
Confidence 97654
No 25
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-36 Score=301.61 Aligned_cols=226 Identities=20% Similarity=0.241 Sum_probs=198.3
Q ss_pred ccchhhhhhhhhccchhhhhhhhc------cccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 010168 198 CDGRKVLTNLLEGKESNLRLKQLK------SDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSP 271 (516)
Q Consensus 198 ~~~~~~l~~ll~~~~~~~~~~~~~------~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 271 (516)
..+.+.++.+...+.......++. .+.....+..+..|.||||+|+..|+.+++++|++.|++++..|..|+||
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 345666666665544433222221 02233445667789999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcC---CCCcCCCCCCChHHHHHHHcC---ChHHHHHHHHcCCCCCc----------CCcchH
Q 010168 272 LHLATSRGYEDITLFLIQKG---VDINIKDKFGNTPLLEAIKCG---HDGVTSLLVKEGASLNV----------DDAGSF 335 (516)
Q Consensus 272 Lh~A~~~g~~~~v~~Ll~~g---~~~~~~d~~g~tpL~~A~~~~---~~~~v~~Ll~~g~~~~~----------~~~~~~ 335 (516)
||+|+..|+.+++++|+++| ++++..|..|.||||+|+..+ +.+++++|+++|++++. ..+.||
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCH
Confidence 99999999999999999998 899999999999999999998 89999999999999885 257799
Q ss_pred HHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 010168 336 LCTAVARGDSDFLKRVLSNG-VDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLI 414 (516)
Q Consensus 336 l~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v 414 (516)
||+|+..|+.+++++|++++ ++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|+.+++
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999875 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcccC
Q 010168 415 KLLEDAECT 423 (516)
Q Consensus 415 ~~L~~~~~~ 423 (516)
++|++++++
T Consensus 363 ~~Ll~~~a~ 371 (373)
T 2fo1_E 363 DIFDRCRPE 371 (373)
T ss_dssp HHHHTTC--
T ss_pred HHHHhcCcc
Confidence 999999875
No 26
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-36 Score=308.32 Aligned_cols=244 Identities=22% Similarity=0.208 Sum_probs=173.1
Q ss_pred ccchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 010168 198 CDGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATS 277 (516)
Q Consensus 198 ~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~ 277 (516)
..+.+.+..+...+.......++...... +..+..+.||||.||..|+.+++++|++.|++++.++..|+||||+|+.
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASP--NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAAR 89 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCS--CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 34556666666666655555555443322 3344556777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcC--CcchHHHHHHHcCCHHHHHHHHHCC
Q 010168 278 RGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD--DAGSFLCTAVARGDSDFLKRVLSNG 355 (516)
Q Consensus 278 ~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g 355 (516)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++++.+.. .+.||||+|+..|+.+++++|+++|
T Consensus 90 ~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 169 (437)
T 1n11_A 90 IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 169 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 77777777777777777777777777777777777777777777777766543 3557777777777777777777777
Q ss_pred CCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccc
Q 010168 356 VDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGM 435 (516)
Q Consensus 356 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~ 435 (516)
++++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++.|++.
T Consensus 170 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----------- 238 (437)
T 1n11_A 170 AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA----------- 238 (437)
T ss_dssp CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------
Confidence 777777777777777777777777777777777777777777777777777777777777777777642
Q ss_pred cccCCCcceeecCCCCCCcccc
Q 010168 436 IDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
......+.+|+|.+...++
T Consensus 239 ---~~~~~~g~t~L~~A~~~g~ 257 (437)
T 1n11_A 239 ---NAESVQGVTPLHLAAQEGH 257 (437)
T ss_dssp ---TCCCTTCCCHHHHHHHTTC
T ss_pred ---CCCCCCCCCHHHHHHHCCC
Confidence 2234456678888877777
No 27
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9.8e-36 Score=288.01 Aligned_cols=211 Identities=28% Similarity=0.360 Sum_probs=190.3
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
.+..+.||||.||..|+.+++++|++.|+++|..|..|+||||+||..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHH-CCCC--------------------------CCCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLS-NGVD--------------------------PSSR 361 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~-~g~~--------------------------~~~~ 361 (516)
.|+.+++++|+++|++++..+ +.||||+|+..++.++++.++. .+.+ ....
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 999999999999999998755 6799999999999999887764 2333 2345
Q ss_pred CCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCC
Q 010168 362 DYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHP 441 (516)
Q Consensus 362 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~ 441 (516)
+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.. ..
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~--------------~~ 261 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME--------------AV 261 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--------------CC
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC--------------Cc
Confidence 6789999999999999999999999999999999999999999999999999999999998543 33
Q ss_pred cceeecCCCCCCcc
Q 010168 442 RKCTVFPFHPWDEK 455 (516)
Q Consensus 442 ~~~~~~~~~~~~~~ 455 (516)
+..+.+|+|.+...
T Consensus 262 d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 262 NKVGQTAFDVADED 275 (299)
T ss_dssp CTTSCCTTTSCCSG
T ss_pred CCCCCCHHHHHHHH
Confidence 44566899998543
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.7e-36 Score=294.42 Aligned_cols=250 Identities=22% Similarity=0.250 Sum_probs=198.7
Q ss_pred hhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCC------------------
Q 010168 201 RKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPN------------------ 262 (516)
Q Consensus 201 ~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------------ 262 (516)
.+.+..++..++..+...++.....++. ..+..|.||||+||..|+.++|++|+++|++++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~-~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNF-QEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 3445555555555555555554443332 123347899999999999999999999887654
Q ss_pred ---------------CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC----------CCCCChHHHHHHHcCChHHH
Q 010168 263 ---------------KTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIK----------DKFGNTPLLEAIKCGHDGVT 317 (516)
Q Consensus 263 ---------------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~----------d~~g~tpL~~A~~~~~~~~v 317 (516)
..|..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v 184 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 184 (337)
T ss_dssp HHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHH
T ss_pred chhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHH
Confidence 45667889999999999999999999999887753 45688999999999999999
Q ss_pred HHHHH-cCCCCCcCC--cchHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHc-CC
Q 010168 318 SLLVK-EGASLNVDD--AGSFLCTAVARGD----SDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEA-GA 389 (516)
Q Consensus 318 ~~Ll~-~g~~~~~~~--~~~~l~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~ 389 (516)
++|++ .|++++..+ +.++++.++..++ ..++++|+++|++++.+|..|+||||+|+..|+.+++++|++. |+
T Consensus 185 ~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~ 264 (337)
T 4g8k_A 185 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 264 (337)
T ss_dssp HHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTC
T ss_pred HHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCC
Confidence 99996 588888765 5688887776543 3578899999999999999999999999999999999999985 89
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCc
Q 010168 390 SVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHN 469 (516)
Q Consensus 390 ~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 469 (516)
+++.+|..|+||||+|+..|+.++|++|+++|++.... .|+|.|...++ .+.
T Consensus 265 ~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-------------------~~L~~A~~~~~---------~~i 316 (337)
T 4g8k_A 265 EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-------------------DLVMTARRNYD---------HSL 316 (337)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-------------------CHHHHHHHTTC---------HHH
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-------------------CHHHHHHHcCC---------HHH
Confidence 99999999999999999999999999999999975321 36777777776 456
Q ss_pred HHHHHHHHhh
Q 010168 470 IEELIKLAVD 479 (516)
Q Consensus 470 ~~~l~~~~~~ 479 (516)
++-|++.|++
T Consensus 317 v~~Ll~~GA~ 326 (337)
T 4g8k_A 317 VKVLLSHGAK 326 (337)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHCcCC
Confidence 6777776654
No 29
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-35 Score=260.72 Aligned_cols=159 Identities=44% Similarity=0.616 Sum_probs=132.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChH
Q 010168 236 ALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDG 315 (516)
Q Consensus 236 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~ 315 (516)
.++|+.||..|+.++|+.|+++|+++|.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCC
Q 010168 316 VTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKD 395 (516)
Q Consensus 316 ~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 395 (516)
++++|+++|++ ++.+|.+|+||||+|+..|+.++|++|+++|++++.+|
T Consensus 85 ~v~~Ll~~gad-------------------------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d 133 (169)
T 4gpm_A 85 VVKLLISKGAD-------------------------------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSD 133 (169)
T ss_dssp HHHHHHHTTCC-------------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHCcCC-------------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 77777776655 45566677777777777777777777777777777777
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 396 RWGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 396 ~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
..|+||||+|+..|+.+++++|+++||+..
T Consensus 134 ~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 134 SDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 777788888777777777887777777643
No 30
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=285.70 Aligned_cols=220 Identities=20% Similarity=0.244 Sum_probs=192.9
Q ss_pred ccchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 010168 198 CDGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATS 277 (516)
Q Consensus 198 ~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~ 277 (516)
..+.+.+..++..+.......++.... ..+..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 57 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV 134 (285)
T ss_dssp CCSCCHHHHHHHTTCHHHHHHHHHTTC--CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 345555666665555555544444333 345566779999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCC
Q 010168 278 RGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNG 355 (516)
Q Consensus 278 ~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g 355 (516)
.|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|
T Consensus 135 ~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 213 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 213 (285)
T ss_dssp HTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC
Confidence 999999999999999998655 49999999999999999999999999998754 679999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-ccC
Q 010168 356 VDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA-ECT 423 (516)
Q Consensus 356 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~-~~~ 423 (516)
++++. +..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+ ++.+++++|+++ |++
T Consensus 214 a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 214 ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 99995 889999999999999999999999999999999999999999999 567999999998 554
No 31
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.2e-36 Score=286.63 Aligned_cols=212 Identities=24% Similarity=0.230 Sum_probs=174.9
Q ss_pred cchhhhhhhhhccchhhhhhhhcccccc-ccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 010168 199 DGRKVLTNLLEGKESNLRLKQLKSDITF-HIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATS 277 (516)
Q Consensus 199 ~~~~~l~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~ 277 (516)
.+.+.++.++..+.......++...... ..+..+..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR 87 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 4555666666655555554444433221 145567789999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCC-----------------------------------------------CcCCCCCCChHHHHHHH
Q 010168 278 RGYEDITLFLIQKGVD-----------------------------------------------INIKDKFGNTPLLEAIK 310 (516)
Q Consensus 278 ~g~~~~v~~Ll~~g~~-----------------------------------------------~~~~d~~g~tpL~~A~~ 310 (516)
.|+.+++++|+++|++ ++.+|..|.||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 167 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167 (282)
T ss_dssp TTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHH
T ss_pred cCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHH
Confidence 9999999999998765 67788999999999999
Q ss_pred cCChHHHHHHHHcCCCCCcCC---cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHc
Q 010168 311 CGHDGVTSLLVKEGASLNVDD---AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEA 387 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~---~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 387 (516)
.|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 168 ~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 247 (282)
T 1oy3_D 168 HKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247 (282)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHc
Confidence 999999999999999999865 78999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCC
Q 010168 388 GASVFTKDRWGNTPLDEGRMCGN 410 (516)
Q Consensus 388 g~~~~~~~~~g~tpl~~A~~~~~ 410 (516)
|++++.+|..|.|||++|.....
T Consensus 248 ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 248 GAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp TCCCCCCC---------------
T ss_pred CCCcCcCCCcccccccccCCccc
Confidence 99999999999999999987653
No 32
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.6e-36 Score=304.05 Aligned_cols=240 Identities=23% Similarity=0.261 Sum_probs=171.7
Q ss_pred hhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 010168 202 KVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYE 281 (516)
Q Consensus 202 ~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~ 281 (516)
..+..+...........++..... .+..+..+.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus 148 t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 225 (437)
T 1n11_A 148 TPLHVAAKYGKVRVAELLLERDAH--PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV 225 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC--TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 344444444444444444433322 233445567777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCC
Q 010168 282 DITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPS 359 (516)
Q Consensus 282 ~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~ 359 (516)
+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++
T Consensus 226 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 305 (437)
T 1n11_A 226 EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305 (437)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC
Confidence 77777777777777777777777777777777777777777777766543 5677888888888888888888888888
Q ss_pred CCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccC
Q 010168 360 SRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKM 439 (516)
Q Consensus 360 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~ 439 (516)
.++..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 306 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~-------------- 371 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN-------------- 371 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC--------------
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCC--------------
Confidence 777788888888888888888888888888888888888888888888888888888888777432
Q ss_pred CCcceeecCCCCCCcccc
Q 010168 440 HPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~ 457 (516)
.....+.+|++.+...++
T Consensus 372 ~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 372 EVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp CCCSSSCCHHHHHHHTTC
T ss_pred CCCCCCCCHHHHHHHcCc
Confidence 234455677777766665
No 33
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.3e-35 Score=275.38 Aligned_cols=219 Identities=26% Similarity=0.346 Sum_probs=195.7
Q ss_pred cchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 010168 199 DGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSR 278 (516)
Q Consensus 199 ~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~ 278 (516)
.+...+..++..+.......++..... .+..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 10 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 87 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK 87 (237)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 445566666655555555444444333 345566789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcC-CCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCC
Q 010168 279 GYEDITLFLIQKG-VDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNG 355 (516)
Q Consensus 279 g~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g 355 (516)
|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999998 8999999999999999999999999999999999998754 679999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 010168 356 VDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 419 (516)
Q Consensus 356 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~ 419 (516)
++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+.+..|++
T Consensus 168 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876666654
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-37 Score=305.90 Aligned_cols=211 Identities=19% Similarity=0.190 Sum_probs=193.4
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHH--------HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChH
Q 010168 233 AELALRVNSAAYHGDLYQLKGLI--------RAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTP 304 (516)
Q Consensus 233 ~~~~t~L~~A~~~g~~~~v~~Ll--------~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tp 304 (516)
..|.||||+||..|+.+++++|+ +.|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 57899999999999998888776 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHcC---CCCCcC--CcchHHHHHHHcC---CHHHHHHHHHCCCCCCC--------CCCCCCcH
Q 010168 305 LLEAIKCGHDGVTSLLVKEG---ASLNVD--DAGSFLCTAVARG---DSDFLKRVLSNGVDPSS--------RDYDHRTP 368 (516)
Q Consensus 305 L~~A~~~~~~~~v~~Ll~~g---~~~~~~--~~~~~l~~A~~~~---~~~~v~~Ll~~g~~~~~--------~~~~g~t~ 368 (516)
||+|+..|+.+++++|++++ ++++.. .+.||||+|+..+ +.+++++|+++|++++. .+..|+||
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCH
Confidence 99999999999999999987 677664 4779999999998 89999999999999886 67789999
Q ss_pred HHHHHHhChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeec
Q 010168 369 LHVAASEGLYLMAKLLLEAG-ASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVF 447 (516)
Q Consensus 369 L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (516)
||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++... ....+.+
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~--------------~d~~g~t 348 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA--------------VDATDHT 348 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--------------CCSSSCC
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC--------------CCCCCCC
Confidence 99999999999999999876 99999999999999999999999999999999986433 3344568
Q ss_pred CCCCCCcccc
Q 010168 448 PFHPWDEKVH 457 (516)
Q Consensus 448 ~~~~~~~~~~ 457 (516)
|+|.|...++
T Consensus 349 ~l~~A~~~g~ 358 (373)
T 2fo1_E 349 ARQLAQANNH 358 (373)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 8898888887
No 35
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.2e-35 Score=290.68 Aligned_cols=226 Identities=25% Similarity=0.242 Sum_probs=195.2
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCc--------------
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDY-DGRSPLHLATSRGYEDITLFLIQKGVDIN-------------- 295 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~-------------- 295 (516)
....+.|+||.|+..|++++|++||++|+++|.++. .|+||||+||..|+.++|++|+++|++++
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 445689999999999999999999999999999876 49999999999999999999999988654
Q ss_pred -------------------CCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcC------------CcchHHHHHHHcCC
Q 010168 296 -------------------IKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD------------DAGSFLCTAVARGD 344 (516)
Q Consensus 296 -------------------~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~------------~~~~~l~~A~~~~~ 344 (516)
..|..|.||||+|+..|+.+++++|+++|++++.. .|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 45678999999999999999999999999988753 35689999999999
Q ss_pred HHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHhCh----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 010168 345 SDFLKRVLS-NGVDPSSRDYDHRTPLHVAASEGL----YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 419 (516)
Q Consensus 345 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~ 419 (516)
.+++++|++ .|++++.++..|.||+|.++..+. ..++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 181 ~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 999999995 699999999999999999887653 468999999999999999999999999999999999999998
Q ss_pred c-ccCccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCcHHHHHHHHhh
Q 010168 420 A-ECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVD 479 (516)
Q Consensus 420 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~ 479 (516)
. |++.. .+...+.+|+|.|+..++ .+.++.|++.|++
T Consensus 261 ~~~~~vn--------------~~d~~G~TpL~~A~~~g~---------~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 261 QEHIEIN--------------DTDSDGKTALLLAVELKL---------KKIAELLCKRGAS 298 (337)
T ss_dssp STTCCTT--------------CBCTTSCBHHHHHHHTTC---------HHHHHHHHTTSCS
T ss_pred hcCCccc--------------CcCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCC
Confidence 5 45332 233456689999988887 4556666665543
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=275.65 Aligned_cols=218 Identities=23% Similarity=0.238 Sum_probs=118.4
Q ss_pred hhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCH
Q 010168 203 VLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTD-YDGRSPLHLATSRGYE 281 (516)
Q Consensus 203 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~ 281 (516)
.+..++..+.......++..... ....+..|.||||.|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.
T Consensus 12 ~l~~A~~~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 89 (240)
T 3eu9_A 12 DIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 89 (240)
T ss_dssp CHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH
T ss_pred HHHHHHHcCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH
Confidence 34444444444443333333222 23333445555555555555555555555555554333 2355555555555555
Q ss_pred HHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCC-HHHHHHHHHCCCCC
Q 010168 282 DITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGD-SDFLKRVLSNGVDP 358 (516)
Q Consensus 282 ~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~-~~~v~~Ll~~g~~~ 358 (516)
+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..++ .+++++|++.|+++
T Consensus 90 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 55555555555555555555555555555555555555555555555432 3455555554443 45555555555555
Q ss_pred CCCCC-CCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010168 359 SSRDY-DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 422 (516)
Q Consensus 359 ~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~ 422 (516)
+..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++++
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 55554 55555555555555555555555555555555555555555555555555555555554
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.3e-36 Score=287.45 Aligned_cols=195 Identities=22% Similarity=0.195 Sum_probs=175.8
Q ss_pred ccchhhhHHHHHHHHhcCCHHHHHHHHH----cCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCC---
Q 010168 229 GKHEAELALRVNSAAYHGDLYQLKGLIR----AGADPN----KTDYDGRSPLHLATSR---GYEDITLFLIQKGVDI--- 294 (516)
Q Consensus 229 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~----~g~~~~----~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~--- 294 (516)
...+..+.||||.||..|+.++|+.|++ .+++++ ..|..|+||||+|+.. |+.+++++|+++|+++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 3456678999999999999999998886 566665 4578999999999987 9999999999998753
Q ss_pred ----cC----CCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC----------------cchHHHHHHHcCCHHHHHH
Q 010168 295 ----NI----KDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD----------------AGSFLCTAVARGDSDFLKR 350 (516)
Q Consensus 295 ----~~----~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~----------------~~~~l~~A~~~~~~~~v~~ 350 (516)
+. .|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 22 56799999999999999999999999999998764 7799999999999999999
Q ss_pred HHH---CCCCCCCCCCCCCcHHHHHHHhCh---------HHHHHHHHHcCCCCC-------CCCCCCCCHHHHHHHcCCH
Q 010168 351 VLS---NGVDPSSRDYDHRTPLHVAASEGL---------YLMAKLLLEAGASVF-------TKDRWGNTPLDEGRMCGNK 411 (516)
Q Consensus 351 Ll~---~g~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~Ll~~g~~~~-------~~~~~g~tpl~~A~~~~~~ 411 (516)
|++ +|++++.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..|+.
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 999 999999999999999999999998 899999999999987 4899999999999999999
Q ss_pred HHHHHHHHcccC
Q 010168 412 NLIKLLEDAECT 423 (516)
Q Consensus 412 ~~v~~L~~~~~~ 423 (516)
+++++|+++|+.
T Consensus 247 ~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 247 GVLAYILQREIH 258 (273)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHCCCC
Confidence 999999999993
No 38
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.7e-35 Score=291.20 Aligned_cols=227 Identities=27% Similarity=0.309 Sum_probs=203.7
Q ss_pred cchhhhHHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHH
Q 010168 230 KHEAELALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 308 (516)
Q Consensus 230 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A 308 (516)
..+..+.++||.||..|+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 3456788999999999999999998876 899999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCC------------------------
Q 010168 309 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRD------------------------ 362 (516)
Q Consensus 309 ~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~------------------------ 362 (516)
+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++..+
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 99999999999999999998765 6799999999999999999999999987654
Q ss_pred ------------------------------CCCCcHHHHHHHh---ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 010168 363 ------------------------------YDHRTPLHVAASE---GLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG 409 (516)
Q Consensus 363 ------------------------------~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~ 409 (516)
..|.||||+|+.. +..+++++|+++|++++.+|..|+||||+|+..|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 258 (351)
T 3utm_A 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA 258 (351)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcC
Confidence 4567999999998 6689999999999999999999999999999999
Q ss_pred CHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCcHHHHHHHHhh
Q 010168 410 NKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVD 479 (516)
Q Consensus 410 ~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~ 479 (516)
+.+++++|+++|++... ....+.+|+|.+...++ .+.++.|++.+++
T Consensus 259 ~~~~v~~Ll~~ga~~n~--------------~d~~g~t~L~~A~~~~~---------~~~v~~Ll~~gad 305 (351)
T 3utm_A 259 HNDVMEVLHKHGAKMNA--------------LDSLGQTALHRAALAGH---------LQTCRLLLSYGSD 305 (351)
T ss_dssp CHHHHHHHHHTTCCTTC--------------CCTTSCCHHHHHHHHTC---------HHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCCCCC--------------cCCCCCCHHHHHHHcCc---------HHHHHHHHHcCCC
Confidence 99999999999986533 33445689999888887 5667777766554
No 39
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.2e-35 Score=257.11 Aligned_cols=130 Identities=38% Similarity=0.496 Sum_probs=116.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHH
Q 010168 270 SPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLK 349 (516)
Q Consensus 270 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~ 349 (516)
++|+.||..|+.++|++|+++|+|+|.+|..|+||||+|+..++.+++++|+++|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga------------------------ 61 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA------------------------ 61 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc------------------------
Confidence 57899999999999999999999999999999999999888888777777666554
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcccccc
Q 010168 350 RVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFH 429 (516)
Q Consensus 350 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~ 429 (516)
+++.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++...+..
T Consensus 62 -------d~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 62 -------DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp -------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred -------chhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 5567788899999999999999999999999999999999999999999999999999999999998876554
Q ss_pred c
Q 010168 430 Y 430 (516)
Q Consensus 430 ~ 430 (516)
.
T Consensus 135 ~ 135 (169)
T 4gpm_A 135 D 135 (169)
T ss_dssp T
T ss_pred C
Confidence 3
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.3e-35 Score=271.75 Aligned_cols=214 Identities=21% Similarity=0.165 Sum_probs=185.1
Q ss_pred hhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcC--CCCCC-CCCCCCcHHHHHHHc
Q 010168 202 KVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAG--ADPNK-TDYDGRSPLHLATSR 278 (516)
Q Consensus 202 ~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~-~~~~g~t~Lh~A~~~ 278 (516)
..+..+...+.......++...... ....+..|.||||+|+..|+.+++++|++.| ++++. .+..|+||||+|+..
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 3444444444444443333333222 2345677899999999999999999999999 55555 788999999999999
Q ss_pred CCHHHHHHHHHcC--CCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHC
Q 010168 279 GYEDITLFLIQKG--VDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSN 354 (516)
Q Consensus 279 g~~~~v~~Ll~~g--~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~ 354 (516)
|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 162 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999998 8999999999999999999999999999999999998765 67999999999999999999999
Q ss_pred C-CCCCCCCCCCCcHHHHHHHhChHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 010168 355 G-VDPSSRDYDHRTPLHVAASEGLYLMAKLLL-EAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 419 (516)
Q Consensus 355 g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~ 419 (516)
| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||+++|+.. +++++|++
T Consensus 163 g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 9 999999999999999999999999999999 89999999999999999999754 56777765
No 41
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=269.75 Aligned_cols=201 Identities=25% Similarity=0.265 Sum_probs=187.2
Q ss_pred ccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCC-CCCChHHHH
Q 010168 229 GKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLE 307 (516)
Q Consensus 229 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpL~~ 307 (516)
...+..+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 3446678899999999999999999999999999999999999999999999999999999999988655 559999999
Q ss_pred HHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhCh-HHHHHHH
Q 010168 308 AIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGL-YLMAKLL 384 (516)
Q Consensus 308 A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~L 384 (516)
|+..|+.+++++|+++|++++..+ +.+|||.|+..|+.+++++|+++|++++..+..|.||||+|+..++ .+++++|
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 999999999999999999998754 6699999999999999999999999999999999999999997776 8999999
Q ss_pred HHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcccCcccccc
Q 010168 385 LEAGASVFTKDR-WGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFH 429 (516)
Q Consensus 385 l~~g~~~~~~~~-~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~ 429 (516)
++.|++++..+. .|.||||+|+..|+.+++++|+++|++......
T Consensus 163 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 208 (240)
T 3eu9_A 163 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208 (240)
T ss_dssp HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCT
T ss_pred HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999997 899999999999999999999999998865544
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=9.4e-36 Score=282.17 Aligned_cols=193 Identities=20% Similarity=0.152 Sum_probs=175.4
Q ss_pred hhHHHHHHHHhcCCHHHHHHHH----HcCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHHcCCC---------
Q 010168 234 ELALRVNSAAYHGDLYQLKGLI----RAGADPNKTD----YDGRSPLHLAT---SRGYEDITLFLIQKGVD--------- 293 (516)
Q Consensus 234 ~~~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~----~~g~t~Lh~A~---~~g~~~~v~~Ll~~g~~--------- 293 (516)
.+.++||.||..|+.+.++.|+ +.|++++..+ ..|+||||+|+ ..|+.+++++|+++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 4689999999999999655555 5899998665 77999999999 67999999999998754
Q ss_pred --CcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC----------------cchHHHHHHHcCCHHHHHHHHH--
Q 010168 294 --INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD----------------AGSFLCTAVARGDSDFLKRVLS-- 353 (516)
Q Consensus 294 --~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~----------------~~~~l~~A~~~~~~~~v~~Ll~-- 353 (516)
++..|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 44556699999999999999999999999999999875 7899999999999999999999
Q ss_pred -CCCCCCCCCCCCCcHHHHHHHhCh---------HHHHHHHHHcCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHH
Q 010168 354 -NGVDPSSRDYDHRTPLHVAASEGL---------YLMAKLLLEAGASV-------FTKDRWGNTPLDEGRMCGNKNLIKL 416 (516)
Q Consensus 354 -~g~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~Ll~~g~~~-------~~~~~~g~tpl~~A~~~~~~~~v~~ 416 (516)
+|++++.+|..|+||||+|+..|+ .+++++|+++|+++ +.+|..|+||||+|+..|+.+++++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999999999887 79999999999998 6799999999999999999999999
Q ss_pred HHHcccCccc
Q 010168 417 LEDAECTQLS 426 (516)
Q Consensus 417 L~~~~~~~~~ 426 (516)
|+++|++...
T Consensus 244 Ll~~g~~~~~ 253 (260)
T 3jxi_A 244 IIRREIADAA 253 (260)
T ss_dssp HHHHHHHHHC
T ss_pred HHHhCCCccc
Confidence 9999986544
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.7e-35 Score=273.55 Aligned_cols=210 Identities=24% Similarity=0.283 Sum_probs=186.6
Q ss_pred CCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcC
Q 010168 246 GDLYQLKGLIRAGADPNKT-DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEG 324 (516)
Q Consensus 246 g~~~~v~~Ll~~g~~~~~~-~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 324 (516)
|+.+++++|+++|++++.. |..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 6788899999999999765 789999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCcC--CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCH
Q 010168 325 A-SLNVD--DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTP 401 (516)
Q Consensus 325 ~-~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tp 401 (516)
+ +++.. .+.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 161 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 161 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence 7 66654 47799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCcHHHHHHHHh
Q 010168 402 LDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAV 478 (516)
Q Consensus 402 l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~ 478 (516)
||+|+..|+.+++++|+++|++... ....+.+|+|.+...++ .+.++-|++.++
T Consensus 162 L~~A~~~~~~~~v~~Ll~~ga~~~~--------------~~~~g~t~l~~A~~~~~---------~~i~~~L~~~g~ 215 (223)
T 2f8y_A 162 LFLAAREGSYETAKVLLDHFANRDI--------------TDHMDRLPRDIAQERMH---------HDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC--------------CCTTCCCHHHHHHHTTC---------HHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcc--------------ccccCCCHHHHHHHhcc---------hHHHHHHHHcCC
Confidence 9999999999999999999986432 23345688888877777 455555655443
No 44
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3e-35 Score=282.48 Aligned_cols=219 Identities=16% Similarity=0.165 Sum_probs=196.4
Q ss_pred ccchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 010168 198 CDGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATS 277 (516)
Q Consensus 198 ~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~ 277 (516)
..+.+.+..++..+.......++......+.. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHH
Confidence 34566777777766666666666554444333 37999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcCCCCCC-ChHHHHHHHcCChHHHHHHHHcCCCCCcC-CcchHHHHHHHcCCHHHHHHHHHCC
Q 010168 278 RGYEDITLFLIQKGVDINIKDKFG-NTPLLEAIKCGHDGVTSLLVKEGASLNVD-DAGSFLCTAVARGDSDFLKRVLSNG 355 (516)
Q Consensus 278 ~g~~~~v~~Ll~~g~~~~~~d~~g-~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~~l~~A~~~~~~~~v~~Ll~~g 355 (516)
.|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|++.... .+.||||+|+..|+.+++++|+++|
T Consensus 105 ~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 184 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYM 184 (285)
T ss_dssp TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcC
Confidence 999999999999999999999999 79999999999999999999999988665 7889999999999999999999999
Q ss_pred CCCCCCCCCCCcH-HHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcccc
Q 010168 356 VDPSSRDYDHRTP-LHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSE 427 (516)
Q Consensus 356 ~~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~ 427 (516)
++++.++..|+|| ||+|+..|+.+++++|+++|++++.+| +.|+..|+.+++++|+++|++....
T Consensus 185 ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~-------~~a~~~~~~~iv~~Ll~~g~~~~~~ 250 (285)
T 3kea_A 185 TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN-------LENVLLDDAEIAKMIIEKHVEYKSD 250 (285)
T ss_dssp HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT-------GGGGTTTCHHHHHHHHHHHHHHTTC
T ss_pred CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-------hhhhhcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999998 999999999999999999999999988 3567799999999999999876543
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-34 Score=276.78 Aligned_cols=214 Identities=26% Similarity=0.347 Sum_probs=182.1
Q ss_pred hhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 010168 203 VLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYED 282 (516)
Q Consensus 203 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~ 282 (516)
.+..+...+.......++..... .+..+..|.||||+||..|+.+++++|++.|++++..|..|+||||+|+..|+.+
T Consensus 43 ~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~ 120 (299)
T 1s70_B 43 VFLAACSSGDTEEVLRLLERGAD--INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD 120 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 34444444444444444433322 3455677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHH-cCCCCCc----------------------------CCcc
Q 010168 283 ITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVK-EGASLNV----------------------------DDAG 333 (516)
Q Consensus 283 ~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~g~~~~~----------------------------~~~~ 333 (516)
++++|+++|++++..|..|.||||+|+..++.++++.|+. .+.+++. ..+.
T Consensus 121 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 200 (299)
T 1s70_B 121 IAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG 200 (299)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred HHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCC
Confidence 9999999999999999999999999999999999988775 3444332 3578
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 010168 334 SFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNL 413 (516)
Q Consensus 334 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~ 413 (516)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.... +.
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~-~~ 279 (299)
T 1s70_B 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL-GY 279 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGG-HH
T ss_pred CHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976544 44
Q ss_pred HHHHHH
Q 010168 414 IKLLED 419 (516)
Q Consensus 414 v~~L~~ 419 (516)
++.+++
T Consensus 280 l~~l~~ 285 (299)
T 1s70_B 280 LEELQK 285 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=270.21 Aligned_cols=189 Identities=21% Similarity=0.251 Sum_probs=178.3
Q ss_pred hhHHHHHHHHhcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcCCCCCCChHHHHHH-
Q 010168 234 ELALRVNSAAYHGDLYQLKGLIRAGAD--PNKTDYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAI- 309 (516)
Q Consensus 234 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~tpL~~A~- 309 (516)
...+++|.|+..|+.+.++.+++.+.+ +|..|..|+||||+|+..|+.+++++|+++|+ +++..|..|.||||+|+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 345678999999999999999988766 89999999999999999999999999999998 99999999999999999
Q ss_pred ----HcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHH
Q 010168 310 ----KCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKL 383 (516)
Q Consensus 310 ----~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 383 (516)
..++.+++++|++.|.+++..+ +.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 6688999999999998887654 7899999999999999999999999999999999999999999999999999
Q ss_pred HHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010168 384 LLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 422 (516)
Q Consensus 384 Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~ 422 (516)
|++ .|++++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 999 899999999999999999999999999999998764
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.5e-32 Score=246.21 Aligned_cols=161 Identities=29% Similarity=0.370 Sum_probs=121.1
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHH
Q 010168 262 NKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTA 339 (516)
Q Consensus 262 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A 339 (516)
|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 4455556666666666666666666666666666666666666666666666666666666666555443 44666666
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 010168 340 VARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 419 (516)
Q Consensus 340 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~ 419 (516)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence 66666666777777777788888999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 010168 420 AEC 422 (516)
Q Consensus 420 ~~~ 422 (516)
++.
T Consensus 189 ~~~ 191 (192)
T 2rfm_A 189 VRR 191 (192)
T ss_dssp HHH
T ss_pred ccC
Confidence 763
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.1e-31 Score=236.85 Aligned_cols=160 Identities=36% Similarity=0.528 Sum_probs=136.8
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
....+.++|+.||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 34557889999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
.|+.+++++|+++|+ +++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 90 ~~~~~~~~~Ll~~g~-------------------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGA-------------------------------DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138 (169)
T ss_dssp TTCHHHHHHHHHTTC-------------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCC-------------------------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 887777777766655 4556677888999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010168 391 VFTKDRWGNTPLDEGRMCGNKNLIKLLEDAE 421 (516)
Q Consensus 391 ~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~ 421 (516)
++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 139 ~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9888888999999999999999999988765
No 49
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.2e-33 Score=277.46 Aligned_cols=223 Identities=19% Similarity=0.203 Sum_probs=193.1
Q ss_pred cchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHc----CCCCCC-----------
Q 010168 199 DGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRA----GADPNK----------- 263 (516)
Q Consensus 199 ~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~----g~~~~~----------- 263 (516)
.+.+.+..+...+.......++..... .....|.||||+|+..|+.+++++|++. |++++.
T Consensus 52 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 127 (364)
T 3ljn_A 52 FGCTALHLACKFGCVDTAKYLASVGEV----HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVN 127 (364)
T ss_dssp TCCCHHHHHHHHCCHHHHHHHHHHCCC----CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEE
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCC----ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhh
Confidence 345566666666666555555554432 2224689999999999999999999998 888776
Q ss_pred ------CCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCC-----CCcC
Q 010168 264 ------TDYDGRSPLHLATSRG--YEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGAS-----LNVD 330 (516)
Q Consensus 264 ------~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~-----~~~~ 330 (516)
.+..|.||||+|+..| +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++ ++..
T Consensus 128 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 128 EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp EETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCC
T ss_pred hhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccc
Confidence 8889999999999999 99999999999999999999999999999999999999999999988 7765
Q ss_pred C--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCC------------CCC
Q 010168 331 D--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFT------------KDR 396 (516)
Q Consensus 331 ~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~ 396 (516)
+ +.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++. .+.
T Consensus 208 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 287 (364)
T 3ljn_A 208 NKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDR 287 (364)
T ss_dssp CTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGG
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccc
Confidence 4 77999999999999999999999999999999999999999999999999999999876533 456
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 397 WGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 397 ~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
.|+||++.|+..|+.+.+..|+..+.+..
T Consensus 288 ~~~~~l~~aa~~~~~~~v~~ll~~~~~~~ 316 (364)
T 3ljn_A 288 VVWLDFVPAAADPSKQEVLQLLQEKLDEV 316 (364)
T ss_dssp CCCCTTSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhccCHHHHHHHHHHHHHHH
Confidence 78999999999999888888887776543
No 50
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=5.3e-32 Score=236.90 Aligned_cols=158 Identities=27% Similarity=0.396 Sum_probs=131.6
Q ss_pred hhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCC
Q 010168 234 ELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 313 (516)
Q Consensus 234 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 313 (516)
...||||.|+..|+.+++++|++.|++++..+..|+||||+|+. |+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 35688888888888888888888888888888888888888888 88888888888888888888888888888888777
Q ss_pred hHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC-CC
Q 010168 314 DGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS-VF 392 (516)
Q Consensus 314 ~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~ 392 (516)
.+++++|+++|+ +++.+|..|+||||+|+..|+.+++++|+++|++ ++
T Consensus 83 ~~~v~~Ll~~g~-------------------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 131 (162)
T 1ihb_A 83 LDTLQTLLEFQA-------------------------------DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG 131 (162)
T ss_dssp HHHHHHHHHTTC-------------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHcCC-------------------------------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC
Confidence 777776666554 5556777888999999999999999999998887 58
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcccC
Q 010168 393 TKDRWGNTPLDEGRMCGNKNLIKLLEDAECT 423 (516)
Q Consensus 393 ~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~ 423 (516)
.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 132 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 132 HRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 8888899999999999999999999998874
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=4.6e-33 Score=259.65 Aligned_cols=210 Identities=21% Similarity=0.241 Sum_probs=180.2
Q ss_pred cchhhhhhhhhccchhhhhhhhccccc--cccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 010168 199 DGRKVLTNLLEGKESNLRLKQLKSDIT--FHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLAT 276 (516)
Q Consensus 199 ~~~~~l~~ll~~~~~~~~~~~~~~~~~--~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~ 276 (516)
.+...++.++..+.......++..... ..++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 455666666655554444333332221 245666778999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCC------CcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcC---CcchHHHHHHHcCCHHH
Q 010168 277 SRGYEDITLFLIQKGVD------INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD---DAGSFLCTAVARGDSDF 347 (516)
Q Consensus 277 ~~g~~~~v~~Ll~~g~~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~---~~~~~l~~A~~~~~~~~ 347 (516)
..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++.. .+.||||+|+..|+.++
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~ 166 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999976 4678899999999999999999999999999999876 46799999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHc
Q 010168 348 LKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF--TKDRWGNTPLDEGRMC 408 (516)
Q Consensus 348 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~tpl~~A~~~ 408 (516)
+++|+++|++++.++..|+||||+|+..|+.+++++|+++|++.. .++..|.||.+.+...
T Consensus 167 v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 167 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999999999999999999999999999999999876 7888999998766543
No 52
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=4.2e-32 Score=252.35 Aligned_cols=201 Identities=21% Similarity=0.215 Sum_probs=175.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCC-----c--CCcchHHHH
Q 010168 267 DGRSPLHLATSRGYEDITLFLIQK-GVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLN-----V--DDAGSFLCT 338 (516)
Q Consensus 267 ~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~-----~--~~~~~~l~~ 338 (516)
.|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|+++. . ..+.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999999999999999998 99999999999999999999999999999999998862 2 357899999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCC-------------CCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 010168 339 AVARGDSDFLKRVLSNGVDPSSRDY-------------DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEG 405 (516)
Q Consensus 339 A~~~~~~~~v~~Ll~~g~~~~~~~~-------------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A 405 (516)
|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998865 799999999999999999999999999999999999999999
Q ss_pred HHcCCHHHH----HHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccccccceEEEcCCcHHHHHHHHhhhc
Q 010168 406 RMCGNKNLI----KLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVDKL 481 (516)
Q Consensus 406 ~~~~~~~~v----~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~ 481 (516)
+..|+.+++ ++|+++|++..... ....+...+.+|+|.|...++ .+.++.|++.++...
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~--------~~~~~~~~g~tpl~~A~~~g~---------~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKS--------LELVPNNQGLTPFKLAGVEGN---------IVMFQHLMQKRKHIA 224 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCC--------GGGCCCTTSCCHHHHHHHHTC---------HHHHHHHHHHHHHC-
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhh--------hhccCCCCCCCHHHHHHHcCC---------HHHHHHHHhcCccch
Confidence 999999988 99999998653211 012344567799999999888 777888888777654
Q ss_pred CCC
Q 010168 482 DFP 484 (516)
Q Consensus 482 ~~~ 484 (516)
...
T Consensus 225 ~~~ 227 (232)
T 2rfa_A 225 AAH 227 (232)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=3e-32 Score=241.08 Aligned_cols=167 Identities=26% Similarity=0.344 Sum_probs=107.5
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCC
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGAD-PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 313 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 313 (516)
+.||||.||..|+.++++.|++.|.+ ++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 35678888888888888888888776 67788888888888888888888888888888888888888888888888888
Q ss_pred hHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCC
Q 010168 314 DGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 391 (516)
Q Consensus 314 ~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 391 (516)
.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 877777777766655432 334444444444444444444444444444444444444444444444444444444444
Q ss_pred CCCCCCCCCH
Q 010168 392 FTKDRWGNTP 401 (516)
Q Consensus 392 ~~~~~~g~tp 401 (516)
..++..|.||
T Consensus 162 ~~~~~~~~~p 171 (172)
T 3v30_A 162 FQSNLVPADP 171 (172)
T ss_dssp SCC-------
T ss_pred hcccCCCCCC
Confidence 4444444443
No 54
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=1.3e-31 Score=235.67 Aligned_cols=160 Identities=27% Similarity=0.336 Sum_probs=122.7
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCCh
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 314 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 314 (516)
+.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 45666666666666666666666666666666666666666666666666666666666666666666666666666665
Q ss_pred HHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCC
Q 010168 315 GVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTK 394 (516)
Q Consensus 315 ~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 394 (516)
+++++|++ +|++++.+|..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 83 ~~v~~Ll~-------------------------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 83 DIVKMLLD-------------------------------CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp HHHHHHHH-------------------------------HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHH-------------------------------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 55555555 45566677888999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 395 DRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 395 ~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
|..|+||||+|+..|+.+++++|++++++..
T Consensus 132 ~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 132 TDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887543
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.6e-32 Score=267.30 Aligned_cols=197 Identities=18% Similarity=0.174 Sum_probs=159.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCC--
Q 010168 237 LRVNSAAYHGDLYQLKGLIRAGADPNK-TDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH-- 313 (516)
Q Consensus 237 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~-- 313 (516)
+.+|.|+..+..++++.|++.|+++|. +|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccc
Confidence 456888888889999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred -hHHHHHHHHcC-CCCCcC--CcchHHHHHHH----cCCHHHHHHHHHC--------------------CCCCCCCCCCC
Q 010168 314 -DGVTSLLVKEG-ASLNVD--DAGSFLCTAVA----RGDSDFLKRVLSN--------------------GVDPSSRDYDH 365 (516)
Q Consensus 314 -~~~v~~Ll~~g-~~~~~~--~~~~~l~~A~~----~~~~~~v~~Ll~~--------------------g~~~~~~~~~g 365 (516)
.++++.|++.+ ++++.. .|.||||+|+. .|+.+++++|++. |++++.++..|
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 78888888876 556654 47799999999 8999999999976 89999999999
Q ss_pred CcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCccee
Q 010168 366 RTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCT 445 (516)
Q Consensus 366 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (516)
+||||.|+. +++|+++ +++.+|..|+||||+|+..|+.+++++|+++|++.. .+...+
T Consensus 259 ~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~--------------~~d~~G 316 (327)
T 1sw6_A 259 KDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF--------------IANKSG 316 (327)
T ss_dssp -CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT--------------CCCTTS
T ss_pred CChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--------------ccCCCC
Confidence 999999986 8999998 588899999999999999999999999999999653 334456
Q ss_pred ecCCCCCCcc
Q 010168 446 VFPFHPWDEK 455 (516)
Q Consensus 446 ~~~~~~~~~~ 455 (516)
.+|+|.|+..
T Consensus 317 ~TpL~~A~~~ 326 (327)
T 1sw6_A 317 LRPVDFGAGL 326 (327)
T ss_dssp CCGGGGTCC-
T ss_pred CCHHHHHHhc
Confidence 6888888654
No 56
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=9.2e-31 Score=226.81 Aligned_cols=151 Identities=32% Similarity=0.438 Sum_probs=132.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCCh
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 314 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 314 (516)
..++||.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 5688999999999999999999998876 578899999999999999999999999999999999999999998888887
Q ss_pred HHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCC
Q 010168 315 GVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTK 394 (516)
Q Consensus 315 ~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 394 (516)
+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 81 ~~v~~Ll~~g~~-------------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 129 (153)
T 1awc_B 81 NIVEVLLKHGAD-------------------------------VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ 129 (153)
T ss_dssp HHHHHHHTTTCC-------------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHcCCC-------------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 777777766554 5567778889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHH
Q 010168 395 DRWGNTPLDEGRMCGNKNLIKLL 417 (516)
Q Consensus 395 ~~~g~tpl~~A~~~~~~~~v~~L 417 (516)
|..|+||||+|+..|+.+++++|
T Consensus 130 ~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 130 SKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999998887
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.5e-31 Score=241.16 Aligned_cols=163 Identities=25% Similarity=0.277 Sum_probs=155.5
Q ss_pred cccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHH
Q 010168 226 FHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPL 305 (516)
Q Consensus 226 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL 305 (516)
...+..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 33456677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHH
Q 010168 306 LEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKL 383 (516)
Q Consensus 306 ~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 383 (516)
|+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999999999999998865 6799999999999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q 010168 384 LLEAG 388 (516)
Q Consensus 384 Ll~~g 388 (516)
|+++|
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 99865
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=2.8e-31 Score=233.65 Aligned_cols=159 Identities=26% Similarity=0.326 Sum_probs=134.1
Q ss_pred chhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 010168 200 GRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG 279 (516)
Q Consensus 200 ~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g 279 (516)
+...+..++..+.......++.... ..+..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQEN--VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCC--CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 4566777777777666666665443 35666778999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCC
Q 010168 280 YEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPS 359 (516)
Q Consensus 280 ~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~ 359 (516)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------------------------------~~ 129 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-------------------------------PT 129 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------------------TT
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------------------CC
Confidence 99999999999999999999999999999998888877777766554 45
Q ss_pred CCCCCCCcHHHHHHHhChHHHHHHHHHcCCCC
Q 010168 360 SRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 391 (516)
Q Consensus 360 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 391 (516)
.++..|.||||+|+..|+.+++++|++++++.
T Consensus 130 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 130 IETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 56677888888888888888888888876543
No 59
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.9e-32 Score=266.01 Aligned_cols=176 Identities=19% Similarity=0.177 Sum_probs=153.9
Q ss_pred ccccc-chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcC-CCCcCCCCC
Q 010168 226 FHIGK-HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGY---EDITLFLIQKG-VDINIKDKF 300 (516)
Q Consensus 226 ~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~g-~~~~~~d~~ 300 (516)
..++. .+..|.||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+ .++++.|++++ ++++.+|..
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~ 200 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM 200 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTT
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCC
Confidence 34445 67789999999999999999999999999999999999999999999998 78889999886 789999999
Q ss_pred CChHHHHHHH----cCChHHHHHHHHc--------------------CCCCCcCC--cchHHHHHHHcCCHHHHHHHHHC
Q 010168 301 GNTPLLEAIK----CGHDGVTSLLVKE--------------------GASLNVDD--AGSFLCTAVARGDSDFLKRVLSN 354 (516)
Q Consensus 301 g~tpL~~A~~----~~~~~~v~~Ll~~--------------------g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~ 354 (516)
|+||||+|+. .|+.+++++|++. |++++..+ +.||||.|+. +++|+++
T Consensus 201 g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~ 274 (327)
T 1sw6_A 201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN 274 (327)
T ss_dssp CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH
T ss_pred CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh
Confidence 9999999999 8999999999987 77777755 6699999985 8999988
Q ss_pred CCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 010168 355 GVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG 409 (516)
Q Consensus 355 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~ 409 (516)
+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|
T Consensus 275 --~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 275 --MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp --TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred --CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 68999999999999999999999999999999999999999999999998765
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=7e-31 Score=230.59 Aligned_cols=159 Identities=36% Similarity=0.476 Sum_probs=136.2
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
+..+.|+||.|+..|+.++++.|++. +.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45688999999999999999999874 56778888889999999999999999999999999999999999999998888
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
.|+.+++++|+++|+ +++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 85 ~~~~~~v~~Ll~~g~-------------------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 133 (165)
T 3twr_A 85 YGHYEVAELLVKHGA-------------------------------VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD 133 (165)
T ss_dssp TTCHHHHHHHHHTTC-------------------------------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCcHHHHHHHHhCCC-------------------------------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 887777777766554 5566777899999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010168 391 VFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 422 (516)
Q Consensus 391 ~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~ 422 (516)
++.+|..|+||||+|+. |+.+++++|+++|+
T Consensus 134 ~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 134 PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999776 88999999998876
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1e-30 Score=231.16 Aligned_cols=159 Identities=25% Similarity=0.290 Sum_probs=150.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCC
Q 010168 268 GRSPLHLATSRGYEDITLFLIQKGVD-INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGD 344 (516)
Q Consensus 268 g~t~Lh~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~ 344 (516)
+.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 57899999999999999999999987 89999999999999999999999999999999998754 6799999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCc
Q 010168 345 SDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 424 (516)
Q Consensus 345 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~ 424 (516)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cc
Q 010168 425 LS 426 (516)
Q Consensus 425 ~~ 426 (516)
..
T Consensus 162 ~~ 163 (172)
T 3v30_A 162 FQ 163 (172)
T ss_dssp SC
T ss_pred hc
Confidence 43
No 62
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=9.8e-32 Score=253.87 Aligned_cols=198 Identities=19% Similarity=0.167 Sum_probs=173.4
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHcCCCCcC----CCCCCChHHHHHHHc---CChHHHHHHHHcCCCCCc------
Q 010168 267 DGRSPLHLATSRGYED----ITLFLIQKGVDINI----KDKFGNTPLLEAIKC---GHDGVTSLLVKEGASLNV------ 329 (516)
Q Consensus 267 ~g~t~Lh~A~~~g~~~----~v~~Ll~~g~~~~~----~d~~g~tpL~~A~~~---~~~~~v~~Ll~~g~~~~~------ 329 (516)
.|+||||+||..|+.+ ++++|+++|++++. .|..|.||||+|+.. |+.+++++|+++|++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 3899999999999997 66777789999998 899999999999999 999999999999987763
Q ss_pred -------CCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CCcHHHHHHHhChHHHHHHHHH---
Q 010168 330 -------DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYD-------------HRTPLHVAASEGLYLMAKLLLE--- 386 (516)
Q Consensus 330 -------~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~g~~~~v~~Ll~--- 386 (516)
..+.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 34789999999999999999999999999999886 9999999999999999999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHH--cCCHH-------HHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 387 AGASVFTKDRWGNTPLDEGRM--CGNKN-------LIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 387 ~g~~~~~~~~~g~tpl~~A~~--~~~~~-------~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
+|++++.+|..|+||||+|+. .++.+ ++++|+++|++...... ........+.+|+|.|...++
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~-------~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ-------LEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC-------GGGCCCTTSCCHHHHHHHTTC
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc-------cccccCCCCCCHHHHHHHhCC
Confidence 999999999999999999999 88988 99999999997532110 013344556799999999888
Q ss_pred cccceEEEcCCcHHHHHHHHhhh
Q 010168 458 RRHGIVLWVPHNIEELIKLAVDK 480 (516)
Q Consensus 458 ~~~~~~~~~p~~~~~l~~~~~~~ 480 (516)
.+.++.|++.+...
T Consensus 234 ---------~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 234 ---------IEIFRHILQREFSG 247 (256)
T ss_dssp ---------HHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHhCCCCC
Confidence 77778888877654
No 63
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.5e-30 Score=233.71 Aligned_cols=186 Identities=24% Similarity=0.378 Sum_probs=162.0
Q ss_pred hhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 010168 202 KVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYE 281 (516)
Q Consensus 202 ~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~ 281 (516)
..+..++..+........+... ....+..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 85 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRT 85 (201)
T ss_dssp THHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 3444444444443333333322 223455667789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcC-CCCCcCC--cchHHHHHHHcCC-----HHHHHHHH
Q 010168 282 DITLFLI-QKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEG-ASLNVDD--AGSFLCTAVARGD-----SDFLKRVL 352 (516)
Q Consensus 282 ~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-~~~~~~~--~~~~l~~A~~~~~-----~~~v~~Ll 352 (516)
+++++|+ ..+++++..|..|.||||+|+..|+.+++++|+++| ++++..+ +.||||+|+..++ .+++++|+
T Consensus 86 ~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll 165 (201)
T 3hra_A 86 EILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM 165 (201)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHH
Confidence 9999999 567899999999999999999999999999999999 8887755 6799999999998 99999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcC
Q 010168 353 SNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG 388 (516)
Q Consensus 353 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 388 (516)
++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 166 ~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 166 ENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999999999999999999999999999999886
No 64
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=4.8e-34 Score=264.58 Aligned_cols=186 Identities=21% Similarity=0.228 Sum_probs=171.9
Q ss_pred ccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHH
Q 010168 229 GKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 308 (516)
Q Consensus 229 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A 308 (516)
...+..+.||||.||..|+.+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 44566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHcCCCCCcC---CcchHHHHH--HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHH
Q 010168 309 IKCGHDGVTSLLVKEGASLNVD---DAGSFLCTA--VARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKL 383 (516)
Q Consensus 309 ~~~~~~~~v~~Ll~~g~~~~~~---~~~~~l~~A--~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 383 (516)
+..|+.+++++|+++|++++.. .+.||||+| +..|+.+++++|+++|++++..+..|.||++.++..+. +++
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ 171 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DEL 171 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBC
T ss_pred HHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---ccc
Confidence 9999999999999999999874 578999999 99999999999999999999999999999997665543 367
Q ss_pred HHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 010168 384 LLEAGAS--VFTKDRWGNTPLDEGRMCGNKNLIKLL 417 (516)
Q Consensus 384 Ll~~g~~--~~~~~~~g~tpl~~A~~~~~~~~v~~L 417 (516)
|++.|++ ++.+|..|+||||+|+..|+.++|+.+
T Consensus 172 ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 172 SFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp CBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred CccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 8889988 788999999999999999999888653
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.2e-30 Score=232.49 Aligned_cols=162 Identities=25% Similarity=0.311 Sum_probs=120.0
Q ss_pred hhHHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcC
Q 010168 234 ELALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 312 (516)
Q Consensus 234 ~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 312 (516)
.+.++||.||..|+.+++++|++. +.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 466788888888888888888887 5678888888888888888888888888888888888888888888888888887
Q ss_pred ChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCC
Q 010168 313 HDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF 392 (516)
Q Consensus 313 ~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 392 (516)
+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 84 ~~~~v~~Ll~~g~~~-------------------------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 132 (179)
T 3f6q_A 84 HRDIVQKLLQYKADI-------------------------------NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 132 (179)
T ss_dssp CHHHHHHHHHTTCCT-------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS
T ss_pred CHHHHHHHHHcCCCC-------------------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 777777777666554 4555566666666666666666666666666666
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccc
Q 010168 393 TKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLS 426 (516)
Q Consensus 393 ~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~ 426 (516)
.+|..|.|||++|+..++.+++++|+++|++...
T Consensus 133 ~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 133 ICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp BCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6666666666666666666666666666665543
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=6.8e-30 Score=222.00 Aligned_cols=153 Identities=25% Similarity=0.425 Sum_probs=133.3
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCC
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 313 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 313 (516)
+.||||.|+..|+.++++.|++. +.+++..+..|+||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 57899999999999999999988 45888999999999999 88999999999999999999999999999999888888
Q ss_pred hHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCC
Q 010168 314 DGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFT 393 (516)
Q Consensus 314 ~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 393 (516)
.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ ++++.
T Consensus 81 ~~~v~~Ll~~g~~-------------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~ 128 (156)
T 1bd8_A 81 LDTLKVLVEHGAD-------------------------------VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR 128 (156)
T ss_dssp HHHHHHHHHTTCC-------------------------------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC
T ss_pred HHHHHHHHHcCCC-------------------------------CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC
Confidence 7777777766554 556677888999999999999999999988 88999
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010168 394 KDRWGNTPLDEGRMCGNKNLIKLLEDA 420 (516)
Q Consensus 394 ~~~~g~tpl~~A~~~~~~~~v~~L~~~ 420 (516)
+|..|+||||+|+..|+.+++++|+++
T Consensus 129 ~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 129 RDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999998864
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.1e-31 Score=252.13 Aligned_cols=173 Identities=20% Similarity=0.275 Sum_probs=147.0
Q ss_pred chhhhHHHHHHHHhc---CCHHHHHHHHHcCCCC-------C----CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC
Q 010168 231 HEAELALRVNSAAYH---GDLYQLKGLIRAGADP-------N----KTDYDGRSPLHLATSRGYEDITLFLIQKGVDINI 296 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~-------~----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 296 (516)
.+..|.||||+||.. |+.+++++|++.|+++ + ..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 467899999999987 9999999999998653 2 2567899999999999999999999999999999
Q ss_pred CCC--------------CCChHHHHHHHcCChHHHHHHHH---cCCCCCcCC--cchHHHHHHHcCC---------HHHH
Q 010168 297 KDK--------------FGNTPLLEAIKCGHDGVTSLLVK---EGASLNVDD--AGSFLCTAVARGD---------SDFL 348 (516)
Q Consensus 297 ~d~--------------~g~tpL~~A~~~~~~~~v~~Ll~---~g~~~~~~~--~~~~l~~A~~~~~---------~~~v 348 (516)
++. .|.||||+|+..|+.+++++|++ +|++++..+ +.||||+|+..|+ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 987 79999999999999999999999 999998765 6799999999998 8999
Q ss_pred HHHHHCCCCCC-------CCCCCCCcHHHHHHHhChHHHHHHHHHcCC-CCCCCCCCCCCHHH
Q 010168 349 KRVLSNGVDPS-------SRDYDHRTPLHVAASEGLYLMAKLLLEAGA-SVFTKDRWGNTPLD 403 (516)
Q Consensus 349 ~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~tpl~ 403 (516)
++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|+ |+......+.+|-+
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 99999999987 489999999999999999999999999999 88887777776643
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=6.1e-30 Score=227.79 Aligned_cols=134 Identities=23% Similarity=0.271 Sum_probs=113.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCC
Q 010168 266 YDGRSPLHLATSRGYEDITLFLIQK-GVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGD 344 (516)
Q Consensus 266 ~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~ 344 (516)
..+.+|||.||..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------------- 63 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA------------------- 63 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC-------------------
Confidence 4577889999999999999988887 66788888888888888888777777777666554
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCc
Q 010168 345 SDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 424 (516)
Q Consensus 345 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~ 424 (516)
+++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 64 ------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 64 ------------RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131 (179)
T ss_dssp ------------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred ------------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 55567788999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccc
Q 010168 425 LSEFHY 430 (516)
Q Consensus 425 ~~~~~~ 430 (516)
......
T Consensus 132 ~~~~~~ 137 (179)
T 3f6q_A 132 SICNKY 137 (179)
T ss_dssp SBCCTT
T ss_pred chhccC
Confidence 655443
No 69
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=8.3e-31 Score=244.83 Aligned_cols=177 Identities=16% Similarity=0.086 Sum_probs=121.4
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcC
Q 010168 233 AELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 312 (516)
Q Consensus 233 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 312 (516)
..|.||||.|+..|+.+.++.|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 45889999999999999999999999999864 78899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHH--HHhChHHHHHHHHHc
Q 010168 313 HDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHR-TPLHVA--ASEGLYLMAKLLLEA 387 (516)
Q Consensus 313 ~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A--~~~g~~~~v~~Ll~~ 387 (516)
+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 9999999999998887754 56888888888888888888888888888877766 888888 677888888888888
Q ss_pred CCCCCCC---------CCCCCCHHHHHHHcCC
Q 010168 388 GASVFTK---------DRWGNTPLDEGRMCGN 410 (516)
Q Consensus 388 g~~~~~~---------~~~g~tpl~~A~~~~~ 410 (516)
|++++.. +..+.+|+++|...|.
T Consensus 162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 8777665 4557777777766664
No 70
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=9.4e-30 Score=240.80 Aligned_cols=162 Identities=20% Similarity=0.252 Sum_probs=147.6
Q ss_pred hhhhHHHHHHHH---hcCCHHHHHHHHHcCCC-----------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC
Q 010168 232 EAELALRVNSAA---YHGDLYQLKGLIRAGAD-----------PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIK 297 (516)
Q Consensus 232 ~~~~~t~L~~A~---~~g~~~~v~~Ll~~g~~-----------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~ 297 (516)
+..|.||||+|+ ..|+.+++++|++.|++ .+..|..|+||||+||..|+.++|++|+++|++++..
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 366999999999 77999999999998754 3445568999999999999999999999999999999
Q ss_pred C--------------CCCChHHHHHHHcCChHHHHHHHH---cCCCCCcCC--cchHHHHHHHcCC---------HHHHH
Q 010168 298 D--------------KFGNTPLLEAIKCGHDGVTSLLVK---EGASLNVDD--AGSFLCTAVARGD---------SDFLK 349 (516)
Q Consensus 298 d--------------~~g~tpL~~A~~~~~~~~v~~Ll~---~g~~~~~~~--~~~~l~~A~~~~~---------~~~v~ 349 (516)
+ ..|.||||+|+..|+.+++++|++ +|++++..+ |.||||+|+..++ .++++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 8 689999999999999999999999 999998865 6799999999888 79999
Q ss_pred HHHHCCCCC-------CCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCC
Q 010168 350 RVLSNGVDP-------SSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFT 393 (516)
Q Consensus 350 ~Ll~~g~~~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 393 (516)
+|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++...
T Consensus 203 ~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 203 LLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 999999998 67999999999999999999999999999876543
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=240.48 Aligned_cols=161 Identities=23% Similarity=0.285 Sum_probs=153.5
Q ss_pred cccchhhhHHHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCcCCCCCC
Q 010168 228 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGA-DPNKTDYDGRSPLHLAT-----SRGYEDITLFLIQKGVDINIKDKFG 301 (516)
Q Consensus 228 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~g~~~~~~d~~g 301 (516)
.+..+..|.||||+||..|+.+++++|++.|+ +++..+..|+||||+|+ ..++.+++++|++.|.+++..|..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 56677889999999999999999999999998 99999999999999999 6789999999999999999999999
Q ss_pred ChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHhChH
Q 010168 302 NTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLS-NGVDPSSRDYDHRTPLHVAASEGLY 378 (516)
Q Consensus 302 ~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~ 378 (516)
.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 999999999999999999999999998765 6799999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 010168 379 LMAKLLLEAG 388 (516)
Q Consensus 379 ~~v~~Ll~~g 388 (516)
+++++|++++
T Consensus 264 ~iv~~Ll~~~ 273 (276)
T 4hbd_A 264 EIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcc
Confidence 9999999875
No 72
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=3e-29 Score=224.09 Aligned_cols=161 Identities=23% Similarity=0.334 Sum_probs=141.1
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCH----HHHHHHHHcCCCCcCCCCCCChHHHHHH
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGADPNKTD-YDGRSPLHLATSRGYE----DITLFLIQKGVDINIKDKFGNTPLLEAI 309 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 309 (516)
+.++|+.||..|+.+.++.+++.+. +..+ ..|+||||+|+.+|+. +++++|+++|+++|.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4578999999999999999998764 4455 6799999999999975 5999999999999999999999999999
Q ss_pred HcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHH-----hChHHHHHH
Q 010168 310 KCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHR-TPLHVAAS-----EGLYLMAKL 383 (516)
Q Consensus 310 ~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~-----~g~~~~v~~ 383 (516)
..|+.++.+ ..+++++|+++|++++.+|..|+ ||||+|+. .++.+++++
T Consensus 84 ~~~~~~~~~-------------------------~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 84 QGGGNDITG-------------------------TTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp HHCTTCHHH-------------------------HHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred HcCCcchhh-------------------------HHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHH
Confidence 988754432 24678888888889999999999 99999998 445679999
Q ss_pred HHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010168 384 LLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 422 (516)
Q Consensus 384 Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~ 422 (516)
|++ +|++++.+|..|+||||+|+..|+.+++++|.+...
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 999 999999999999999999999999999999998664
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.6e-30 Score=240.82 Aligned_cols=192 Identities=16% Similarity=0.063 Sum_probs=158.3
Q ss_pred HHHHHHcCCCCCCCC---CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCC
Q 010168 251 LKGLIRAGADPNKTD---YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASL 327 (516)
Q Consensus 251 v~~Ll~~g~~~~~~~---~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~ 327 (516)
++.|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 467889999887554 45678899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHH--HHhChHHHHHHHHHcCCCCCCCCCCCCCHH
Q 010168 328 NVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRD-YDHRTPLHVA--ASEGLYLMAKLLLEAGASVFTKDRWGNTPL 402 (516)
Q Consensus 328 ~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A--~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl 402 (516)
+..+ |.||||+|+..|+.+++++|+++|++++..+ ..|+||||+| +..|+.+++++|+++|++++.+|..|.||+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 8765 6799999999999999999999999999986 6999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 403 DEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 403 ~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
+.++..+. .++|++.|++. +...+...+.+|+|.|+..++
T Consensus 161 ~~~~~~~~---~~~ll~~ga~~------------~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 161 WDYSAEFG---DELSFREGESV------------TVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp SCBCCSST---TBCCBCTTCEE------------EEEESSCTTCSSEEEEEETTE
T ss_pred HHHhhccc---cccCccccccc------------cccccCCCcccHHHHHHHcCC
Confidence 96655443 24566666542 122344456689999888777
No 74
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=2.2e-28 Score=207.24 Aligned_cols=134 Identities=27% Similarity=0.391 Sum_probs=114.2
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHH
Q 010168 258 GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLC 337 (516)
Q Consensus 258 g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~ 337 (516)
+++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. |+.+++++|+++|+++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~---------- 70 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP---------- 70 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS----------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC----------
Confidence 57888899999999999999999999999999999999999999999999988 8888888777766554
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Q 010168 338 TAVARGDSDFLKRVLSNGVDPSSRDYD-HRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKL 416 (516)
Q Consensus 338 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~ 416 (516)
+.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 71 ---------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 71 ---------------------NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp ---------------------SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred ---------------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 456666 7888888888888888888888888888888888888888888888888888
Q ss_pred HHHcccC
Q 010168 417 LEDAECT 423 (516)
Q Consensus 417 L~~~~~~ 423 (516)
|+++|++
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 8888874
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=8.7e-29 Score=231.09 Aligned_cols=160 Identities=22% Similarity=0.227 Sum_probs=120.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcC
Q 010168 266 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARG 343 (516)
Q Consensus 266 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~ 343 (516)
..|.||||.|+..|+.++++.|+++|++++.. ..|.||||+|+..|+.+++++|++.|++++..+ +.||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 46999999999999999999999999999864 789999999999999999999999999998755 679999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCC-CHHHHH--HHcCCHHHHHHHHHc
Q 010168 344 DSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGN-TPLDEG--RMCGNKNLIKLLEDA 420 (516)
Q Consensus 344 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-tpl~~A--~~~~~~~~v~~L~~~ 420 (516)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998887 999999 888999999999999
Q ss_pred ccCccc
Q 010168 421 ECTQLS 426 (516)
Q Consensus 421 ~~~~~~ 426 (516)
|++...
T Consensus 162 ~a~~~~ 167 (239)
T 1ycs_B 162 QEKMGI 167 (239)
T ss_dssp HHHTTT
T ss_pred hhcccc
Confidence 987654
No 76
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=5.6e-28 Score=209.91 Aligned_cols=140 Identities=22% Similarity=0.214 Sum_probs=76.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cch-HHHHHHH
Q 010168 265 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGS-FLCTAVA 341 (516)
Q Consensus 265 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~-~l~~A~~ 341 (516)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+ .|+.+++++|+++|++++..+ +.| |||+|+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 344555555555555555555555555555555555555555543 455555555555555544433 233 5555555
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 010168 342 RGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEG 405 (516)
Q Consensus 342 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A 405 (516)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||.+-+
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 5555556666666667777888899999999999999999999999999999999999987633
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=4.8e-29 Score=246.70 Aligned_cols=183 Identities=15% Similarity=0.010 Sum_probs=148.4
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---cCCCCCCChHH
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRAGADP---NKTDYDGRSPLHLATSRGYEDITLFLIQKGVDI---NIKDKFGNTPL 305 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~tpL 305 (516)
+..+.||||.||..|+.+++++|++.|+.. +..+..|.||||+||..|+.++|++|+++|+++ +..+.+ .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 344679999999999999999999998732 234557889999999999999999999999863 333333 8999
Q ss_pred HHHHHcCChHHHHHHHHcCCCCCc--C--CcchHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHH
Q 010168 306 LEAIKCGHDGVTSLLVKEGASLNV--D--DAGSFLCTAV-ARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLM 380 (516)
Q Consensus 306 ~~A~~~~~~~~v~~Ll~~g~~~~~--~--~~~~~l~~A~-~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~ 380 (516)
|+|+..|+.++|++|+++|++++. . .+.||||+|+ ..|+.+++++|+++|+ .|.||||+|+..|+.++
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTH
T ss_pred HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHH
Confidence 999999999999999999998664 3 3679999999 9999999999999774 37899999999999999
Q ss_pred HHHHHHcCCCCC-------------------------------------------------------------CCCCCCC
Q 010168 381 AKLLLEAGASVF-------------------------------------------------------------TKDRWGN 399 (516)
Q Consensus 381 v~~Ll~~g~~~~-------------------------------------------------------------~~~~~g~ 399 (516)
+++|+++|++++ .....+.
T Consensus 241 v~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~ 320 (376)
T 2aja_A 241 NPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 320 (376)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCC
T ss_pred HHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCcc
Confidence 999987664321 1123467
Q ss_pred CHHHHHHHcCCHHHHHHHHHccc
Q 010168 400 TPLDEGRMCGNKNLIKLLEDAEC 422 (516)
Q Consensus 400 tpl~~A~~~~~~~~v~~L~~~~~ 422 (516)
||||+|+..|+.+++++|++.+.
T Consensus 321 ~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 321 ELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp HHHHHHHHHTCTTHHHHHTTSHH
T ss_pred HHHHHHHHcCcHHHHHHHHcChH
Confidence 88999999999999999998764
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=4.9e-27 Score=198.93 Aligned_cols=132 Identities=25% Similarity=0.328 Sum_probs=117.0
Q ss_pred ccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC-CChHH
Q 010168 227 HIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKF-GNTPL 305 (516)
Q Consensus 227 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~tpL 305 (516)
.++..+..+.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |.|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 345566778999999999999999999999999999999999999999999 9999999999999999999999 99999
Q ss_pred HHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHH
Q 010168 306 LEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLL 385 (516)
Q Consensus 306 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 385 (516)
|+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~-------------------------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 131 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGAR-------------------------------LDVCDAWGRLPVDLAEEQGHRDIARYLH 131 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCC-------------------------------CCCCSSSSSCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC-------------------------------CCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999998888888777776554 4566777888888888888888888888
Q ss_pred HcCCC
Q 010168 386 EAGAS 390 (516)
Q Consensus 386 ~~g~~ 390 (516)
++|+|
T Consensus 132 ~~Gad 136 (136)
T 1d9s_A 132 AATGD 136 (136)
T ss_dssp HHHCC
T ss_pred HcCCC
Confidence 88875
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=3e-27 Score=205.35 Aligned_cols=143 Identities=22% Similarity=0.291 Sum_probs=117.6
Q ss_pred ccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCh-HHHH
Q 010168 229 GKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNT-PLLE 307 (516)
Q Consensus 229 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-pL~~ 307 (516)
+..+..+.||||+|+..|+.+++++|++.|++++..|..|+||||+|+ .|+.+++++|+++|++++.+|..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 345566889999999999999999999999999999999999999995 99999999999999999999999999 9999
Q ss_pred HHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 010168 308 AIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVA 372 (516)
Q Consensus 308 A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 372 (516)
|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.++..|.||.+.+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 999999999999999999999765 67999999999999999999999999999999999998744
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.3e-25 Score=186.99 Aligned_cols=126 Identities=44% Similarity=0.661 Sum_probs=96.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHH
Q 010168 267 DGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSD 346 (516)
Q Consensus 267 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~ 346 (516)
+|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------------------- 60 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-------------------- 60 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--------------------
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC--------------------
Confidence 477888888888888888888888888888888888888888777777666666665544
Q ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccC
Q 010168 347 FLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECT 423 (516)
Q Consensus 347 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~ 423 (516)
++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 61 -----------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 61 -----------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -----------CcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 445566677788888877777888888877777777777788888888888888888888777763
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=7.7e-26 Score=191.54 Aligned_cols=90 Identities=36% Similarity=0.471 Sum_probs=49.3
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcC
Q 010168 233 AELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 312 (516)
Q Consensus 233 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 312 (516)
..+.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 34555555555555555555555555555555555555555555555555555555555555555555555555555444
Q ss_pred ChHHHHHHHH
Q 010168 313 HDGVTSLLVK 322 (516)
Q Consensus 313 ~~~~v~~Ll~ 322 (516)
+.+++++|++
T Consensus 92 ~~~~v~~Ll~ 101 (136)
T 2jab_A 92 HLEIAEVLLK 101 (136)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4444444433
No 82
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.3e-25 Score=190.20 Aligned_cols=124 Identities=28% Similarity=0.371 Sum_probs=117.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHc
Q 010168 265 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVAR 342 (516)
Q Consensus 265 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~ 342 (516)
...|.||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 4568999999999999999999999999999999999999999999999999999999999998755 67999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcC
Q 010168 343 GDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG 388 (516)
Q Consensus 343 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 388 (516)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999876
No 83
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.2e-26 Score=196.85 Aligned_cols=134 Identities=37% Similarity=0.487 Sum_probs=107.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHH
Q 010168 258 GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLC 337 (516)
Q Consensus 258 g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~ 337 (516)
|+|+ .+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------- 68 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL----------- 68 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----------
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-----------
Confidence 5677 6788899999999999999999999999999999999999999988888877777777766554
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 010168 338 TAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLL 417 (516)
Q Consensus 338 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L 417 (516)
++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|
T Consensus 69 --------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 69 --------------------VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp --------------------TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred --------------------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 556677788999999999999999999999999998999999999999888888888888
Q ss_pred HHcccC
Q 010168 418 EDAECT 423 (516)
Q Consensus 418 ~~~~~~ 423 (516)
.+.++.
T Consensus 129 ~~~~~s 134 (137)
T 3c5r_A 129 EKNESS 134 (137)
T ss_dssp ------
T ss_pred cccccC
Confidence 776553
No 84
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.3e-25 Score=196.17 Aligned_cols=155 Identities=25% Similarity=0.279 Sum_probs=126.4
Q ss_pred hhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 010168 203 VLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYED 282 (516)
Q Consensus 203 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~ 282 (516)
.+..++..+.......++... ...+..+..+.||||.|+. |+.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 84 (162)
T 1ihb_A 8 ELASAAARGDLEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLD 84 (162)
T ss_dssp HHHHHHHHTCHHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 344444444444444444333 2335566778999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 010168 283 ITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRD 362 (516)
Q Consensus 283 ~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~ 362 (516)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++. ++.++
T Consensus 85 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------------------~~~~~ 134 (162)
T 1ihb_A 85 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN------------------------------VGHRN 134 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC------------------------------TTCCC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC------------------------------CCCcC
Confidence 999999999999999999999999999999999998888877652 34566
Q ss_pred CCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 363 YDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 363 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
..|.||||+|+..|+.+++++|+++|+|
T Consensus 135 ~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 135 HKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 7788888888888888888888888875
No 85
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=4.7e-28 Score=239.61 Aligned_cols=177 Identities=13% Similarity=0.039 Sum_probs=153.8
Q ss_pred hhHHHHHHHHh-cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---cCCCCCCChHHHHHH
Q 010168 234 ELALRVNSAAY-HGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDI---NIKDKFGNTPLLEAI 309 (516)
Q Consensus 234 ~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~tpL~~A~ 309 (516)
.+.++++.|+. .++.+++++++++|++ ++||||+||..|+.++|++|+++|+.. +..+..|.||||+|+
T Consensus 64 ~~ll~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa 136 (376)
T 2aja_A 64 RQLLCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136 (376)
T ss_dssp HHHHHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH
Confidence 35678888887 5788999999998765 459999999999999999999999832 244567889999999
Q ss_pred HcCChHHHHHHHHcCCC-----CCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-HhChHHHH
Q 010168 310 KCGHDGVTSLLVKEGAS-----LNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSS--RDYDHRTPLHVAA-SEGLYLMA 381 (516)
Q Consensus 310 ~~~~~~~v~~Ll~~g~~-----~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~-~~g~~~~v 381 (516)
..|+.++|++|+++|++ ++..+ .||||+|+..|+.+++++|+++|++++. .|..|+||||+|+ ..|+.++|
T Consensus 137 ~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv 215 (376)
T 2aja_A 137 ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI 215 (376)
T ss_dssp HTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred HcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHH
Confidence 99999999999999975 34444 8999999999999999999999999887 8888999999999 99999999
Q ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 382 KLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 382 ~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
++|+++|++ |.||||+|+..|+.+++++|+++|++..
T Consensus 216 ~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 216 NFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 999998753 8999999999999999999999998653
No 86
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=6.3e-26 Score=199.73 Aligned_cols=148 Identities=30% Similarity=0.341 Sum_probs=124.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCC
Q 010168 265 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGD 344 (516)
Q Consensus 265 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~ 344 (516)
...+.||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------------- 71 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA------------------- 71 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------------------
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------
Confidence 3556789999999999999999999999999888889999888888887777777766554
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCc
Q 010168 345 SDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 424 (516)
Q Consensus 345 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~ 424 (516)
+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 72 ------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 139 (169)
T 2y1l_E 72 ------------DVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV 139 (169)
T ss_dssp ------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ------------CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 45567788999999999999999999999999999999999999999999999999999999999864
Q ss_pred cccccccCccccccCCCcceeecCCCCCCcccc
Q 010168 425 LSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 457 (516)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (516)
.. ....+.+|+|.+...++
T Consensus 140 ~~--------------~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 140 NA--------------QDKFGKTAFDISIDNGN 158 (169)
T ss_dssp TC--------------CCTTSCCHHHHHHHTTC
T ss_pred CC--------------cCCCCCCHHHHHHHhCC
Confidence 32 23345577777766666
No 87
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=4.6e-27 Score=209.95 Aligned_cols=140 Identities=26% Similarity=0.268 Sum_probs=107.5
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCC-CCCChHHHHHHH
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLEAIK 310 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpL~~A~~ 310 (516)
+..|.||||.|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4577888888888888888888888 88888888888888888888888888888888888888777 778888888887
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
.|+.+++++|+++|++ ++.+|..|+||||+|+..++.
T Consensus 120 ~~~~~~v~~Ll~~ga~-------------------------------~~~~d~~g~tpl~~A~~~~~~------------ 156 (183)
T 3deo_A 120 YVRPEVVEALVELGAD-------------------------------IEVEDERGLTALELAREILKT------------ 156 (183)
T ss_dssp TTCHHHHHHHHHHTCC-------------------------------TTCCCTTSCCHHHHHHHHHHT------------
T ss_pred cCcHHHHHHHHHcCCC-------------------------------CcCCCCCCCCHHHHHHHhccC------------
Confidence 7777777777666554 455667777777777765433
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010168 391 VFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 420 (516)
Q Consensus 391 ~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~ 420 (516)
..+.+||++|+..|+.+++++|.++
T Consensus 157 -----~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 -----TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp -----CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -----cccccHHHHHHHcCHHHHHHHHHHh
Confidence 3356778888888877888777653
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=4.3e-25 Score=183.90 Aligned_cols=125 Identities=45% Similarity=0.625 Sum_probs=112.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCCh
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 314 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 314 (516)
|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 315 GVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 315 ~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|+|
T Consensus 82 ~~~~~Ll~~g~~-------------------------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEAGAD-------------------------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCC-------------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCC-------------------------------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 888777776654 455667788888888888888888888888875
No 89
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=2.3e-25 Score=195.30 Aligned_cols=156 Identities=25% Similarity=0.302 Sum_probs=123.5
Q ss_pred hhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 010168 201 RKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGY 280 (516)
Q Consensus 201 ~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~ 280 (516)
.+.+..++..+.......++.. ........+..+.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 87 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH 87 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCT-TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred hHHHHHHHHhCCHHHHHHHHHc-CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCc
Confidence 3444455544444444433332 234455667778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 010168 281 EDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSS 360 (516)
Q Consensus 281 ~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~ 360 (516)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++ +.
T Consensus 88 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-------------------------------~~ 136 (165)
T 3twr_A 88 YEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP-------------------------------TK 136 (165)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-------------------------------TC
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------------------------------cc
Confidence 99999999999999999999999999999988888877777766554 55
Q ss_pred CCCCCCcHHHHHHHhChHHHHHHHHHcCC
Q 010168 361 RDYDHRTPLHVAASEGLYLMAKLLLEAGA 389 (516)
Q Consensus 361 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 389 (516)
+|..|.||||+|+. |+.+++++|+++|+
T Consensus 137 ~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 137 KNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 66677788887655 77788888877764
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=2.6e-25 Score=208.02 Aligned_cols=144 Identities=26% Similarity=0.265 Sum_probs=123.8
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCC-CCCChHHHHHHH
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLEAIK 310 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpL~~A~~ 310 (516)
+..|.||||.||..|+.++++.|++ |+++|.+|..|+||||+||..|+.++|++|+++|++++.++ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4578999999999999999999999 99999999999999999999999999999999999999988 789999999988
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
.|+.+++++|+++|+ +++.+|..|+||||+|+..++
T Consensus 121 ~g~~~~v~~Ll~~ga-------------------------------~~~~~d~~g~t~l~~A~~~~~------------- 156 (244)
T 3ui2_A 121 YVRPEVVEALVELGA-------------------------------DIEVEDERGLTALELAREILK------------- 156 (244)
T ss_dssp TTCHHHHHHHHHTTC-------------------------------CTTCCCTTCCCHHHHHHHHHT-------------
T ss_pred cCCHHHHHHHHHCCC-------------------------------CCCCCCCCCCcHHHHHHHHHh-------------
Confidence 888777777766655 555677889999999986332
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCc
Q 010168 391 VFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 424 (516)
Q Consensus 391 ~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~ 424 (516)
...+.|||++|+..|+.+++++|++++.+.
T Consensus 157 ----~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 157 ----TTPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp ----TCCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ----ccCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 256889999999999999999999876543
No 91
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=8.3e-25 Score=189.16 Aligned_cols=123 Identities=28% Similarity=0.372 Sum_probs=108.9
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
.+..|.||||.|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 384 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 384 (516)
.|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|
T Consensus 110 ~~~~~~v~~Ll~~ga~~-------------------------------~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 110 HNHQEVVELLIKYGADV-------------------------------HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTCHHHHHHHHHTTCCT-------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCc-------------------------------cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 88888888877766654 45666677777777777777777765
No 92
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.2e-24 Score=188.62 Aligned_cols=151 Identities=26% Similarity=0.334 Sum_probs=122.7
Q ss_pred hhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 010168 203 VLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYED 282 (516)
Q Consensus 203 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~ 282 (516)
.+..++..+.......++.. .....+..+..|.||||+ |..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 82 (156)
T 1bd8_A 5 RLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD 82 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 34444444444444444433 333455667779999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 010168 283 ITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRD 362 (516)
Q Consensus 283 ~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~ 362 (516)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++ ++ ++.+|
T Consensus 83 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-------------------------------~~~~~ 130 (156)
T 1bd8_A 83 TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-------------------------------LHRRD 130 (156)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-------------------------------TTCCC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-------------------------------CCCcC
Confidence 99999999999999999999999999999998888888776 44 44566
Q ss_pred CCCCcHHHHHHHhChHHHHHHHHHc
Q 010168 363 YDHRTPLHVAASEGLYLMAKLLLEA 387 (516)
Q Consensus 363 ~~g~t~L~~A~~~g~~~~v~~Ll~~ 387 (516)
..|.||||+|+..|+.+++++|+++
T Consensus 131 ~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 131 ARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 6777888888888888888877753
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.3e-24 Score=193.98 Aligned_cols=112 Identities=20% Similarity=0.147 Sum_probs=98.3
Q ss_pred ccchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHH
Q 010168 198 CDGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTD-YDGRSPLHLAT 276 (516)
Q Consensus 198 ~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~ 276 (516)
..+...+..+...+.......++. ....+..+..|.||||+|+..|+.+++++|++.|++++.++ ..|+||||+|+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 456777888887777766666665 33456677789999999999999999999999999999998 88999999999
Q ss_pred HcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcC
Q 010168 277 SRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 312 (516)
Q Consensus 277 ~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 312 (516)
..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 999999999999999999999999999999998744
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=9.6e-25 Score=210.31 Aligned_cols=138 Identities=18% Similarity=0.087 Sum_probs=90.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcC------CCCCCChHHHHHHHc---CChHHHHHHHHcCCCCCcCC--cchHH
Q 010168 268 GRSPLHLATSRGYEDITLFLIQKGVDINI------KDKFGNTPLLEAIKC---GHDGVTSLLVKEGASLNVDD--AGSFL 336 (516)
Q Consensus 268 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~------~d~~g~tpL~~A~~~---~~~~~v~~Ll~~g~~~~~~~--~~~~l 336 (516)
+.++||.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++..+ +.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34456666666666666665665655555 355556666666654 55556666666665555433 44566
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Q 010168 337 CTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 411 (516)
Q Consensus 337 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~ 411 (516)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 666666666666666777777888889999999999999999999999999886 488999999998874
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=7.7e-25 Score=195.41 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=118.1
Q ss_pred hhhHHHHHHHHhcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC------HHHHHHHHHcCCCCcCCCCCCC
Q 010168 233 AELALRVNSAAYHGDL----YQLKGLIRAGADPNKTDYDGRSPLHLATSRGY------EDITLFLIQKGVDINIKDKFGN 302 (516)
Q Consensus 233 ~~~~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~------~~~v~~Ll~~g~~~~~~d~~g~ 302 (516)
..|.||||+|+..|+. +++++|+++|+++|.+|..|+||||+|+..|+ .+++++|+++|+++|.+|..|.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 6799999999999985 58999999999999999999999999999987 6889999999999999999999
Q ss_pred -hHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHhChHHH
Q 010168 303 -TPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLS-NGVDPSSRDYDHRTPLHVAASEGLYLM 380 (516)
Q Consensus 303 -tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~ 380 (516)
||||+|+..+..+ .++.+++++|++ +|++++.+|..|+||||+|+..|+.++
T Consensus 116 ttpLh~A~~~~~~~--------------------------~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~ 169 (186)
T 3t8k_A 116 IVVFKNIFNYFVDE--------------------------NEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIA 169 (186)
T ss_dssp BCTTGGGGGCCSCH--------------------------HHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHH
T ss_pred chHHHHHHHcCCCh--------------------------hhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 9999998755421 122467777887 888889999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 010168 381 AKLLLEAGASVFTKD 395 (516)
Q Consensus 381 v~~Ll~~g~~~~~~~ 395 (516)
|++|.+...+.+.++
T Consensus 170 v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 170 LKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhccc
Confidence 999988655444443
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=3.4e-24 Score=177.93 Aligned_cols=109 Identities=31% Similarity=0.321 Sum_probs=60.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCH
Q 010168 266 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDS 345 (516)
Q Consensus 266 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~ 345 (516)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------------- 64 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA-------------------- 64 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC--------------------
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC--------------------
Confidence 345555555555555555555555555555555555555555555555544444444333
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 010168 346 DFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEG 405 (516)
Q Consensus 346 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A 405 (516)
+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 65 -----------~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 65 -----------DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp -----------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred -----------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 3334445555666666666666666666666666666666666666665
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=7e-24 Score=176.06 Aligned_cols=118 Identities=33% Similarity=0.437 Sum_probs=101.0
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHc
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKC 311 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 311 (516)
+..+.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHH
Q 010168 312 GHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLM 380 (516)
Q Consensus 312 ~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~ 380 (516)
|+.+++++|+++|+++ +.+|..|.||||+|+..+..++
T Consensus 84 ~~~~~v~~Ll~~ga~~-------------------------------~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADK-------------------------------TVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp TCHHHHHHHHHTTCCT-------------------------------TCCCTTSCCHHHHCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCC-------------------------------CCcCCCCCCHHHHhCCHHHHHH
Confidence 8888888777766554 4566677788887754444433
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=1.5e-24 Score=183.78 Aligned_cols=128 Identities=25% Similarity=0.341 Sum_probs=110.4
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
.+..|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGA 389 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 389 (516)
.|+.+++++|+++|++ ++.+|..|.||||+|+..+..+++++|.+.+.
T Consensus 86 ~~~~~~v~~Ll~~ga~-------------------------------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 86 NGHVDIVKLLLSYGAS-------------------------------RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp TTCHHHHHHHHHTTCC-------------------------------TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred cCCHHHHHHHHHcCCC-------------------------------CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 8888877777766554 55677778888888888888888887776554
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=4.5e-24 Score=196.72 Aligned_cols=136 Identities=21% Similarity=0.274 Sum_probs=95.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcCCCCCCChHHHHHHH
Q 010168 232 EAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQK-GVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 232 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~ 310 (516)
+..+.||||.||..|+.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++ |++++.+|..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 45677888888888888888888888888888888888888888888888888888887 88888888888888888877
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 390 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 390 (516)
.|+.+++++|+++|+ +++.+|..|.||||+|+..|+.++++.|++.|++
T Consensus 150 ~~~~~~v~~Ll~~ga-------------------------------~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 150 KGYADIVQLLLAKGA-------------------------------RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HTCHHHHHHHHHHTC-------------------------------CSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred cCCHHHHHHHHHcCC-------------------------------CCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 777777766666554 4445667778888888888888888888888877
Q ss_pred CCCCCCCC
Q 010168 391 VFTKDRWG 398 (516)
Q Consensus 391 ~~~~~~~g 398 (516)
.+..+..|
T Consensus 199 ~~~~~~~~ 206 (222)
T 3ehr_A 199 RTLSNAED 206 (222)
T ss_dssp --------
T ss_pred hhccchhh
Confidence 76665544
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.1e-23 Score=194.11 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=110.1
Q ss_pred HHHhhhccchhhhhhhhhccchhhhhhhhccccccccccchhhhHHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCc
Q 010168 192 ILEIYFCDGRKVLTNLLEGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRS 270 (516)
Q Consensus 192 ll~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t 270 (516)
.+......+...+..++..+.......++..... .+..+..|.||||+||..|+.+++++|++. |++++.+|..|+|
T Consensus 65 ~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~t 142 (222)
T 3ehr_A 65 YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG--VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDT 142 (222)
T ss_dssp HHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCC
T ss_pred hccccccccccccccccccCcHHHHHHHHhCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCC
Confidence 3444556677888888887777776666655433 455667899999999999999999999999 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCc
Q 010168 271 PLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDA 332 (516)
Q Consensus 271 ~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 332 (516)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|++.|+..+..+.
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 99999999999999999999999999999999999999999999999999999988776554
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=1.6e-21 Score=185.68 Aligned_cols=125 Identities=22% Similarity=0.161 Sum_probs=117.1
Q ss_pred CChHHHHHHHcCChHHHHHHHHcCCCCCc--------CCcchHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 010168 301 GNTPLLEAIKCGHDGVTSLLVKEGASLNV--------DDAGSFLCTAVAR---GDSDFLKRVLSNGVDPSSRDYDHRTPL 369 (516)
Q Consensus 301 g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~--------~~~~~~l~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L 369 (516)
..++|+.|+..|+.+.++.+++.|++++. ..+.||||+|+.. |+.+++++|+++|++++.+|..|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 45789999999999999999999998653 3478999999999 899999999999999999999999999
Q ss_pred HHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCcc
Q 010168 370 HVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 425 (516)
Q Consensus 370 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~ 425 (516)
|+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999998653
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.6e-22 Score=209.05 Aligned_cols=122 Identities=21% Similarity=0.195 Sum_probs=78.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCC------CCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCcCCCCCCChHHHH
Q 010168 237 LRVNSAAYHGDLYQLKGLIRAGADPNKT------DYDGRSPLHLATS---RGYEDITLFLIQKGVDINIKDKFGNTPLLE 307 (516)
Q Consensus 237 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~~~g~t~Lh~A~~---~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~ 307 (516)
+.||.|+..|+.+.++.|++.|+++|.. +..|+||||+||. .|+.+++++|+++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 5677777777777777777777777665 6677777777755 677777777777777777777777777777
Q ss_pred HHHcCChHHHHHHHHcCCCCCcCC--cchHHHHHHHcCCHHHHHHHHHCCCCC
Q 010168 308 AIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDP 358 (516)
Q Consensus 308 A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~ 358 (516)
|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|+++
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 777777766666666665555432 234444444444444444444444433
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2e-22 Score=194.07 Aligned_cols=140 Identities=26% Similarity=0.152 Sum_probs=122.8
Q ss_pred CCCCChHHHHHHHcCChHHHHHHHHcCCCCCc--------CCcchHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCC
Q 010168 298 DKFGNTPLLEAIKCGHDGVTSLLVKEGASLNV--------DDAGSFLCTAVAR---GDSDFLKRVLSNGVDPSSRDYDHR 366 (516)
Q Consensus 298 d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~--------~~~~~~l~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~ 366 (516)
...+.++|+.|+..|+.+.++.|++.|++++. ..+.||||+|+.. |+.+++++|+++|++++.+|..|+
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 44467899999999999999999999999885 3467999999997 899999999999999999999999
Q ss_pred cHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccCccccccccCccccccCCCcceee
Q 010168 367 TPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTV 446 (516)
Q Consensus 367 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (516)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++. +.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~--------------------g~ 287 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT--------------------FA 287 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT--------------------TS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC--------------------CC
Confidence 9999999999999999999999999999999999999999999999999999999851 34
Q ss_pred cCCCCCCcccc
Q 010168 447 FPFHPWDEKVH 457 (516)
Q Consensus 447 ~~~~~~~~~~~ 457 (516)
+|+|.|...++
T Consensus 288 tpLh~A~~~g~ 298 (301)
T 2b0o_E 288 FPLHVDYSWVI 298 (301)
T ss_dssp SCCC-------
T ss_pred ChhHHHHhcCC
Confidence 88999887776
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=9.9e-22 Score=187.05 Aligned_cols=129 Identities=21% Similarity=0.188 Sum_probs=104.0
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCC------CCCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcCCCCCC
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADP------NKTDYDGRSPLHLATSR---GYEDITLFLIQKGVDINIKDKFG 301 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g 301 (516)
......++|+.|+..|+.+.++.+++.|+++ +..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|
T Consensus 126 ~~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g 205 (278)
T 1dcq_A 126 DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG 205 (278)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTC
T ss_pred ccchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCC
Confidence 3445567888888888888888888888884 34477788888888888 78888888888888888888888
Q ss_pred ChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHH
Q 010168 302 NTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMA 381 (516)
Q Consensus 302 ~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v 381 (516)
.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..|+.+++
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~ga-------------------------------d~~~~d~~g~tpL~~A~~~~~~~~v 254 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKA-------------------------------SIEIANESGETPLDIAKRLKHEHCE 254 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC-------------------------------CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC-------------------------------CCCCccCCCCCHHHHHHHcCCHHHH
Confidence 888888888777777776666555 5556778889999999999999999
Q ss_pred HHHHHcCCC
Q 010168 382 KLLLEAGAS 390 (516)
Q Consensus 382 ~~Ll~~g~~ 390 (516)
++|+++|++
T Consensus 255 ~~Ll~~ga~ 263 (278)
T 1dcq_A 255 ELLTQALSG 263 (278)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHcCCC
Confidence 999988875
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.9e-22 Score=157.32 Aligned_cols=92 Identities=42% Similarity=0.586 Sum_probs=87.5
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCCh
Q 010168 235 LALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 314 (516)
Q Consensus 235 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 314 (516)
|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 010168 315 GVTSLLVKEGAS 326 (516)
Q Consensus 315 ~~v~~Ll~~g~~ 326 (516)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999874
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=4.8e-22 Score=195.83 Aligned_cols=144 Identities=31% Similarity=0.331 Sum_probs=99.0
Q ss_pred hhHHHHHHHHhc-CCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 234 ELALRVNSAAYH-GDLYQLKGLIRAGADPNKTD--YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 234 ~~~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~--~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
.+.|+||.|+.. |+.++++.|++.|+++|..+ ..|+||||+|+..|+.+++++|+++|+++|..|..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 456888999888 89999999888888888887 788899999999999999999999999988888888888888888
Q ss_pred cCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcC--
Q 010168 311 CGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG-- 388 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 388 (516)
.|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+..+
T Consensus 278 ~g~~~~v~~LL~~Gad~-------------------------------~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 278 LGHTGLACLFLKRGADL-------------------------------GARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HTCHHHHHHHHHTTCCT-------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred cCcHHHHHHHHHCcCCC-------------------------------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 88877777777766655 455566666666666666666666666544
Q ss_pred -CCCCCCCCCCCCHHHHHHHc
Q 010168 389 -ASVFTKDRWGNTPLDEGRMC 408 (516)
Q Consensus 389 -~~~~~~~~~g~tpl~~A~~~ 408 (516)
++....+..+.|+++++...
T Consensus 327 ~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 327 EAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp ---------------------
T ss_pred cccccccCCCCCCHHHHHHHH
Confidence 22333445566666665544
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=1.3e-21 Score=192.68 Aligned_cols=128 Identities=25% Similarity=0.264 Sum_probs=98.3
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHHcCCCCcCCC--CCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcC
Q 010168 267 DGRSPLHLATSR-GYEDITLFLIQKGVDINIKD--KFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARG 343 (516)
Q Consensus 267 ~g~t~Lh~A~~~-g~~~~v~~Ll~~g~~~~~~d--~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~ 343 (516)
.+.||||.|+.. |+.++++.|+++|+++|..+ ..|.||||+|+..|+.+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~---------------------------- 249 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLL---------------------------- 249 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHH----------------------------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHH----------------------------
Confidence 344566666666 66666666666666666655 55666666655555554
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcccC
Q 010168 344 DSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECT 423 (516)
Q Consensus 344 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~v~~L~~~~~~ 423 (516)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++..
T Consensus 250 ---iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 250 ---ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp ---HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred ---HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 45555555666778888999999999999999999999999999999999999999999999999999999988855
Q ss_pred cc
Q 010168 424 QL 425 (516)
Q Consensus 424 ~~ 425 (516)
..
T Consensus 327 ~~ 328 (368)
T 3jue_A 327 EA 328 (368)
T ss_dssp --
T ss_pred cc
Confidence 43
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.8e-21 Score=151.71 Aligned_cols=92 Identities=39% Similarity=0.533 Sum_probs=82.0
Q ss_pred cchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Q 010168 332 AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 411 (516)
Q Consensus 332 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~ 411 (516)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56777777777777788888888888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcccC
Q 010168 412 NLIKLLEDAECT 423 (516)
Q Consensus 412 ~~v~~L~~~~~~ 423 (516)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999874
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=2.3e-21 Score=181.19 Aligned_cols=113 Identities=29% Similarity=0.315 Sum_probs=100.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHcCCH
Q 010168 266 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDS 345 (516)
Q Consensus 266 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~ 345 (516)
..|.||||+||..|+.+++++|++ |+++|.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~------------------ 103 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL------------------ 103 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT------------------
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC------------------
Confidence 568999999999999999999999 9999999999999999999888888888777766655
Q ss_pred HHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 010168 346 DFLKRVLSNGVDPSSRD-YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN 410 (516)
Q Consensus 346 ~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~ 410 (516)
+.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 104 -------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 104 -------------DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp -------------TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred -------------CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence 4455 679999999999999999999999999999999999999999997544
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=7.8e-21 Score=196.36 Aligned_cols=134 Identities=19% Similarity=0.142 Sum_probs=114.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcCC------CCCCChHHHHHHH---cCChHHHHHHHHcCCCCCcCC--cchHH
Q 010168 268 GRSPLHLATSRGYEDITLFLIQKGVDINIK------DKFGNTPLLEAIK---CGHDGVTSLLVKEGASLNVDD--AGSFL 336 (516)
Q Consensus 268 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~------d~~g~tpL~~A~~---~~~~~~v~~Ll~~g~~~~~~~--~~~~l 336 (516)
..+.||.|+..|+.++++.|+++|+++|.. |..|.||||+||. .|+.+++++|+++|++++..+ |.|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 447899999999999999999999999987 8899999999977 899999999999999999865 67999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 010168 337 CTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRM 407 (516)
Q Consensus 337 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~ 407 (516)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. ||+|.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 999999999999999999999999999999999999999999999999999999876 57776653
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=2.1e-21 Score=158.88 Aligned_cols=109 Identities=37% Similarity=0.476 Sum_probs=84.9
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHHcCChHHHHHHHHcCCCCCcCCcchHHHHHHHc
Q 010168 263 KTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVAR 342 (516)
Q Consensus 263 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~ 342 (516)
.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~----------------- 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA----------------- 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC-----------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC-----------------
Confidence 467788888888888888888888888888888888888888888877777766666665554
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHH
Q 010168 343 GDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPL 402 (516)
Q Consensus 343 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl 402 (516)
+++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||-
T Consensus 67 --------------~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 --------------DVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp --------------CTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred --------------CCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 4556677788888888888888888888888888888888888773
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=1.1e-20 Score=154.68 Aligned_cols=101 Identities=37% Similarity=0.529 Sum_probs=95.9
Q ss_pred chhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHHHHH
Q 010168 231 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 310 (516)
Q Consensus 231 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 310 (516)
.+..|.||||.|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 35568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCCCcCC
Q 010168 311 CGHDGVTSLLVKEGASLNVDD 331 (516)
Q Consensus 311 ~~~~~~v~~Ll~~g~~~~~~~ 331 (516)
.|+.+++++|+++|++++..+
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHS
T ss_pred CCCHHHHHHHHHcCCCCCcCC
Confidence 999999999999999988654
No 113
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.80 E-value=3.2e-19 Score=161.00 Aligned_cols=145 Identities=18% Similarity=0.359 Sum_probs=135.1
Q ss_pred HHhhccCCHHHHHHHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEec
Q 010168 62 IDLLSCLPWDVIYKISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVG 141 (516)
Q Consensus 62 ~d~~~~~P~~~~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~ 141 (516)
-.++..+|..+..++..+.+..+++++|+|++++++++..++..++.+.|+||++|+++|++++.+|||.+|.|+++.
T Consensus 50 ~~il~~l~~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~-- 127 (198)
T 2ptm_A 50 RHIFREVSESIRQDVANYNCRDLVASVPFFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIM-- 127 (198)
T ss_dssp HHHHHHSCHHHHHHHHHHHTHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCSEEEEEEECCEEEEC--
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHhcCcchhcCCHHHHHHHHHhccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEe--
Confidence 357889999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 142 EDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 142 ~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.+|+ ++..+.+|++||+.+++.+.++.++++|.++|.++.+++++|..++..+|.....++..+..+
T Consensus 128 ~~g~--~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~r 194 (198)
T 2ptm_A 128 SDGV--IATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSLSVQHFNQVLDEFPAMRKTMEEIAVRR 194 (198)
T ss_dssp TTSC--EEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHTC
T ss_pred cCCe--EEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 5665 789999999999999999999999999999999999999999999999998887777665543
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=8.3e-19 Score=142.11 Aligned_cols=93 Identities=29% Similarity=0.487 Sum_probs=85.8
Q ss_pred cccchhhhHHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCChHHHH
Q 010168 228 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 307 (516)
Q Consensus 228 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpL~~ 307 (516)
....+..+.|+||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34556779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHH
Q 010168 308 AIKCGHDGVTSLL 320 (516)
Q Consensus 308 A~~~~~~~~v~~L 320 (516)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 115
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.77 E-value=2.9e-18 Score=155.20 Aligned_cols=143 Identities=24% Similarity=0.394 Sum_probs=131.8
Q ss_pred HHhhccCCHHHHHHHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEec
Q 010168 62 IDLLSCLPWDVIYKISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVG 141 (516)
Q Consensus 62 ~d~~~~~P~~~~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~ 141 (516)
-.++..+|..+..++..+.+..+++++|+|.+++++++..++..++.+.|+||++|+++|++++.+|||.+|.|+++.
T Consensus 51 ~~il~~l~~~L~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~-- 128 (202)
T 3bpz_A 51 DSILGELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLT-- 128 (202)
T ss_dssp HHHHHHSCHHHHHHHHHHHTHHHHHTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEC--
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHhcCCchhcCCHHHHHHHHHhCCceEECCCCEEEECCCcCCeEEEEeccEEEEEE--
Confidence 468899999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 142 EDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 142 ~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
.+|++. .+.+|++||+.+++.+.++.++++|.++|.++.+++++|..++..+|.....+...+..
T Consensus 129 ~~g~~~---~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~ 193 (202)
T 3bpz_A 129 KGNKEM---KLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID 193 (202)
T ss_dssp TTSCCE---EEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHHHHHHHHHH
T ss_pred CCCeEE---EEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 566643 58999999999999999999999999999999999999999999999888777665543
No 116
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=99.77 E-value=1e-18 Score=148.51 Aligned_cols=128 Identities=17% Similarity=0.251 Sum_probs=113.9
Q ss_pred HHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeee---EEEecCCCee
Q 010168 82 MPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEET---VSQLQPNSSF 158 (516)
Q Consensus 82 ~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~---l~~l~~G~~f 158 (516)
.++++++|+|++++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.+ +..+.+|++|
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 5 PERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIF 84 (142)
T ss_dssp TTGGGGSHHHHTSCHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEE
T ss_pred HHHHhhCchhccCCHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEe
Confidence 4578999999999999999999999999999999999999999999999999999999889998888 9999999999
Q ss_pred eccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 159 GEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 159 Ge~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
|+.+++.+.++.++++|.++|.++.++++.+..++..+|.....++..+..
T Consensus 85 G~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~l~~ 135 (142)
T 3mdp_A 85 GVSSLIKPYHYTSSARATKPVRVVDINGARLREMSENNQALGQVLMNNVAA 135 (142)
T ss_dssp CGGGSSTTCBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred chHHHcCCCCceEEEEECCcEEEEEEeHHHHHHHHHHChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988887776654
No 117
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=99.76 E-value=2.6e-18 Score=149.27 Aligned_cols=139 Identities=24% Similarity=0.327 Sum_probs=124.7
Q ss_pred hhccCCHHHHHHHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCC
Q 010168 64 LLSCLPWDVIYKISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGED 143 (516)
Q Consensus 64 ~~~~~P~~~~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~ 143 (516)
++..+|..+..++..+.+.++++++|+|++++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++.
T Consensus 8 il~~lp~~l~~~i~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---- 83 (160)
T 4f8a_A 8 VLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ---- 83 (160)
T ss_dssp -------CCHHHHHHHHTHHHHTTCGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEE----
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHhCHhhhhCCHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE----
Confidence 5678899998999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCeeeEEEecCCCeeeccccccC--CCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhh
Q 010168 144 GSEETVSQLQPNSSFGEVSILCN--IPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNL 207 (516)
Q Consensus 144 g~~~~l~~l~~G~~fGe~~ll~~--~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~l 207 (516)
++.++..+.+|++||+.+++.+ .++.++++|.++|.++.++++.+.+++..+|.....++..+
T Consensus 84 -~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l 148 (160)
T 4f8a_A 84 -DDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSFSRNL 148 (160)
T ss_dssp -TTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHC
T ss_pred -CCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999988 68999999999999999999999999999998888777665
No 118
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=99.76 E-value=2.7e-18 Score=149.38 Aligned_cols=129 Identities=22% Similarity=0.364 Sum_probs=120.5
Q ss_pred HHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCC
Q 010168 76 ISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPN 155 (516)
Q Consensus 76 i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G 155 (516)
.....+..+++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++. ..+|++.++..+.+|
T Consensus 31 ~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G 109 (161)
T 3idb_B 31 DQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNR 109 (161)
T ss_dssp HHHHHHHHHHTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESC
T ss_pred HHHHHHHHHHhCCHhhhcCCHHHHHHHHHhcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCC
Confidence 3445667899999999999999999999999999999999999999999999999999999999 889999999999999
Q ss_pred CeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhh
Q 010168 156 SSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLT 205 (516)
Q Consensus 156 ~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~ 205 (516)
++||+.+++.+.++.+++.|.++|.++.++++.|..+++.+|...+.++.
T Consensus 110 ~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~ 159 (161)
T 3idb_B 110 GSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYE 159 (161)
T ss_dssp CEECGGGGTCCCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHTSCCC--
T ss_pred CEechHHHHcCCCcccEEEECCCeEEEEEeHHHHHHHHHHCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999988776554
No 119
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=99.75 E-value=5.3e-18 Score=145.31 Aligned_cols=128 Identities=19% Similarity=0.272 Sum_probs=121.0
Q ss_pred HHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeecc
Q 010168 82 MPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 161 (516)
Q Consensus 82 ~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~ 161 (516)
.+++++.|+|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.++++..+.+|++.++..+.+|++||+.
T Consensus 4 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 83 (149)
T 2pqq_A 4 DDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGEL 83 (149)
T ss_dssp GGGGTSSTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGG
T ss_pred HHHhhhChhhhcCCHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechH
Confidence 46789999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred ccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 162 SILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 162 ~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
+++.+.++..+++|.++|.++.++++.+..++..+|.....++..+..
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~ 131 (149)
T 2pqq_A 84 SLFDPGPRTATGTALTEVKLLALGHGDLQPWLNVRPEVATALLRAVAR 131 (149)
T ss_dssp GGTSCEECSSEEEESSCEEEEEEEGGGHHHHHHHCTHHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEEccceEEEEEeHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888777766554
No 120
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.75 E-value=2.8e-18 Score=156.53 Aligned_cols=142 Identities=21% Similarity=0.380 Sum_probs=132.6
Q ss_pred hhccCCHHHHHHHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCC
Q 010168 64 LLSCLPWDVIYKISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGED 143 (516)
Q Consensus 64 ~~~~~P~~~~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~ 143 (516)
++..+|..+..++..+++..++ ++|+|++++++++..++..++.+.|+||++|+++|++++.+|||.+|.|+++. +
T Consensus 57 il~~Lp~~L~~~i~~~~~~~l~-~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~---~ 132 (212)
T 3ukn_A 57 LLKDFPDELRADIAMHLNKELL-QLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK---D 132 (212)
T ss_dssp TTTTSCHHHHHHHHTTCCCGGG-GSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEES---S
T ss_pred HHHHcCHHHHHHHHHHHHHHHH-hcHHhhcCCHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEEE---C
Confidence 7899999999999999998887 89999999999999999999999999999999999999999999999999986 3
Q ss_pred CCeeeEEEecCCCeeeccccccCC--CcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhcc
Q 010168 144 GSEETVSQLQPNSSFGEVSILCNI--PQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEGK 211 (516)
Q Consensus 144 g~~~~l~~l~~G~~fGe~~ll~~~--~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~~ 211 (516)
| .++..+.+|++||+.+++.+. ++.++++|.++|.++.+++++|.+++..+|.....++..+....
T Consensus 133 ~--~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~~l 200 (212)
T 3ukn_A 133 N--TVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYISLKGLREVLRLYPEYAQKFVSEIQHDL 200 (212)
T ss_dssp S--CEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHE
T ss_pred C--eEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 4 678999999999999999998 99999999999999999999999999999999888887776543
No 121
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=99.74 E-value=6.3e-18 Score=150.90 Aligned_cols=132 Identities=16% Similarity=0.209 Sum_probs=124.0
Q ss_pred HHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCC
Q 010168 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNS 156 (516)
Q Consensus 77 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~ 156 (516)
.......+++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+++|++.++..+.+|+
T Consensus 33 ~~~~~~~~L~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~ 112 (187)
T 3gyd_A 33 YFEEILEIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGA 112 (187)
T ss_dssp GHHHHHHHHTTCCSSCCCCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTC
T ss_pred HHHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCC
Confidence 44566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhh
Q 010168 157 SFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLL 208 (516)
Q Consensus 157 ~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll 208 (516)
+||+.+++.+.++.++++|.++|.++.++++.|..++..+|.....++..+.
T Consensus 113 ~fGe~~~l~~~~~~~~v~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~ 164 (187)
T 3gyd_A 113 IIGEMSMIDGMPRSASCVASLPTDFAVLSRDALYQLLANMPKLGNKVLIRLL 164 (187)
T ss_dssp EESHHHHHHCCCCSSEEEEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred eeeeHHHhCCCCeeEEEEECCCeEEEEEcHHHHHHHHHHChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888775443
No 122
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=9.2e-18 Score=135.89 Aligned_cols=87 Identities=39% Similarity=0.612 Sum_probs=76.6
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 010168 331 DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN 410 (516)
Q Consensus 331 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~ 410 (516)
++.++||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN 102 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCC
Confidence 35567777777777777777777788888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 010168 411 KNLIKLL 417 (516)
Q Consensus 411 ~~~v~~L 417 (516)
.+++++|
T Consensus 103 ~~~~~~L 109 (110)
T 2zgd_A 103 EDLAEIL 109 (110)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 123
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=99.74 E-value=8.2e-18 Score=145.01 Aligned_cols=130 Identities=15% Similarity=0.240 Sum_probs=117.5
Q ss_pred hcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 80 LYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 80 ~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
....+++++++|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||
T Consensus 9 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 88 (154)
T 2z69_A 9 VHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 88 (154)
T ss_dssp HHHHHHTTSTTTTTSCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEES
T ss_pred hHHHHhhcChhhcCCCHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeec
Confidence 34568999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred ccccccCCC-cceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 160 EVSILCNIP-QPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 160 e~~ll~~~~-~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
+.+++.+.+ +.++++|.++|.++.++++.|..++..+|.....++..+..
T Consensus 89 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~~~~ 139 (154)
T 2z69_A 89 EAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLST 139 (154)
T ss_dssp GGGGGSSCSBCSSEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHhhccCCCCCceEEEEccceEEEEECHHHHHHHHHHChHHHHHHHHHHHH
Confidence 999999988 99999999999999999999999999999888887776654
No 124
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=99.71 E-value=2.3e-17 Score=148.15 Aligned_cols=129 Identities=18% Similarity=0.150 Sum_probs=120.0
Q ss_pred cHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeec
Q 010168 81 YMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 160 (516)
Q Consensus 81 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe 160 (516)
+..+++.+|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+
T Consensus 5 ~~~l~~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge 84 (194)
T 3dn7_A 5 HTALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSD 84 (194)
T ss_dssp CHHHHHHHHTTSCCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEee
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred c-ccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 161 V-SILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 161 ~-~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
. +++.+.++.++++|.++|.++.++++.|.+++..+|.....++..+..
T Consensus 85 ~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~ 134 (194)
T 3dn7_A 85 YMAFQKQQPADFYIQSVENCELLSITYTEQENLFERIPALERYFRLVYQK 134 (194)
T ss_dssp HHHHHHTCBCSSEEEESSCEEEEEEEHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred hHHHhcCCCCceEEEEECCEEEEEEeHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 7 677888999999999999999999999999999999888776655543
No 125
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=99.70 E-value=3.8e-17 Score=149.39 Aligned_cols=126 Identities=21% Similarity=0.324 Sum_probs=116.9
Q ss_pred hhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccc
Q 010168 85 IEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSIL 164 (516)
Q Consensus 85 l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll 164 (516)
|+++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.+++
T Consensus 1 L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~ 80 (216)
T 4ev0_A 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLL 80 (216)
T ss_dssp ---CGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHH
T ss_pred CCCChhhcCCCHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhc
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 165 CNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 165 ~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.+.++.+++.|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 81 ~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 126 (216)
T 4ev0_A 81 DEGERSASAVAVEDTELLALFREDYLALIRRLPLVAHNLAALLARR 126 (216)
T ss_dssp HCCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEEcCCEEEEEEcHHHHHHHHHHCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887776666543
No 126
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=99.70 E-value=4.2e-17 Score=150.79 Aligned_cols=129 Identities=20% Similarity=0.266 Sum_probs=120.4
Q ss_pred HHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeecc
Q 010168 82 MPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 161 (516)
Q Consensus 82 ~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~ 161 (516)
.++++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.
T Consensus 5 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 84 (231)
T 3e97_A 5 LDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGET 84 (231)
T ss_dssp HHHHHTSGGGTTCCHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTT
T ss_pred HHHHhcChhhccCCHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 162 SILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 162 ~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
+++.+.++.+++.|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 85 ~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 133 (231)
T 3e97_A 85 AVLAHQERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARR 133 (231)
T ss_dssp TTTCCCCCCEEEEESSCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHhCCCCceEEEEECCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888777666543
No 127
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=99.70 E-value=9.6e-17 Score=135.81 Aligned_cols=123 Identities=24% Similarity=0.262 Sum_probs=108.8
Q ss_pred HHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecC
Q 010168 75 KISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQP 154 (516)
Q Consensus 75 ~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~ 154 (516)
+...+....+++++|+|++++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++. +| ..+..+.+
T Consensus 15 ~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~g--~~~~~~~~ 89 (139)
T 3ocp_A 15 PQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EG--VKLCTMGP 89 (139)
T ss_dssp HHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEE---TT--EEEEEECT
T ss_pred HHHHHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE---CC--EEEEEeCC
Confidence 44556778899999999999999999999999999999999999999999999999999999965 45 47899999
Q ss_pred CCeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchh
Q 010168 155 NSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRK 202 (516)
Q Consensus 155 G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~ 202 (516)
|++||+.+++.+.++.++++|.++|.++.++++.|.+++..+|...++
T Consensus 90 G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~r~ 137 (139)
T 3ocp_A 90 GKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHT 137 (139)
T ss_dssp TCEESCHHHHHCCCCSSEEEESSCEEEEEEEHHHHHHHHTC-------
T ss_pred CCEeccHHHHCCCCcceEEEECcceEEEEEcHHHHHHHHhhChHhhhh
Confidence 999999999999999999999999999999999999999999877654
No 128
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=99.69 E-value=3.8e-17 Score=151.79 Aligned_cols=132 Identities=17% Similarity=0.203 Sum_probs=124.1
Q ss_pred HhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 79 TLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 79 ~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
....++++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++|
T Consensus 7 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 7 EAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp HHHHHHHTTSHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred HHHHHHHhCCHhhccCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 159 GEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 159 Ge~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
|+.+++.+.++.+++.|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 87 G~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 138 (237)
T 3fx3_A 87 GEAVALRNTPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGH 138 (237)
T ss_dssp CHHHHHHTCCCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCCCceEEECCceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888777666543
No 129
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=99.69 E-value=3.2e-17 Score=151.15 Aligned_cols=129 Identities=19% Similarity=0.309 Sum_probs=121.4
Q ss_pred cHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeec
Q 010168 81 YMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 160 (516)
Q Consensus 81 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe 160 (516)
..++++++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+
T Consensus 4 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~ 83 (227)
T 3d0s_A 4 MDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGE 83 (227)
T ss_dssp CHHHHTTSSTTSSCCSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESC
T ss_pred HHHHHhcChhhcCCCHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEee
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 161 VSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 161 ~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
.+++.+.++.++++|.++|.++.++++.|.+++..+|.....++..+..
T Consensus 84 ~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~ 132 (227)
T 3d0s_A 84 LSIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLAR 132 (227)
T ss_dssp HHHHSCSCCSSEEEESSCEEEEEEEHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHcCCCCceeEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887777766554
No 130
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=99.69 E-value=1e-16 Score=148.27 Aligned_cols=132 Identities=17% Similarity=0.136 Sum_probs=122.5
Q ss_pred HhcHHHhhcccCccCCCHHHHHHHHHH--hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCC
Q 010168 79 TLYMPYIEKVSLFKGCSSEFINQIVIR--VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNS 156 (516)
Q Consensus 79 ~~~~~~l~~~~~f~~l~~~~l~~l~~~--~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~ 156 (516)
.....+++++|+|..++++++..+... ++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|+
T Consensus 14 ~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~ 93 (232)
T 1zyb_A 14 ETMFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPY 93 (232)
T ss_dssp HHHHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSE
T ss_pred HHHHHHHhcCccccCCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCC
Confidence 344567999999999999999999998 999999999999999999999999999999999989999999999999999
Q ss_pred eeeccccccCCC-cceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 157 SFGEVSILCNIP-QPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 157 ~fGe~~ll~~~~-~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
+||+.+++.+.+ +.++++|.++|.++.++++.|.+++..+|.....++..+..+
T Consensus 94 ~fG~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 148 (232)
T 1zyb_A 94 LIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNR 148 (232)
T ss_dssp EECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHH
T ss_pred eeeehHHhCCCCCCceEEEEccceEEEEEEHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999999988 899999999999999999999999999998887777666543
No 131
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=99.69 E-value=9.5e-17 Score=147.21 Aligned_cols=127 Identities=14% Similarity=0.103 Sum_probs=118.9
Q ss_pred HHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe--eec
Q 010168 83 PYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS--FGE 160 (516)
Q Consensus 83 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~--fGe 160 (516)
++++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++ ||+
T Consensus 3 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~ 82 (220)
T 3dv8_A 3 SFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSA 82 (220)
T ss_dssp --CCSCGGGGTSCHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGG
T ss_pred chHHhChhhhcCCHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred cccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 161 VSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 161 ~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
.+++.+.++..+++|.++|.++.++++.|.+++..+|.....++..+..
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~ 131 (220)
T 3dv8_A 83 SCIMRSIQFEVTIEAEKDTDLWIIPAEIYKGIMKDSAPVANYTNELMAT 131 (220)
T ss_dssp GGGCTTCCCCCEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHhCCCCCceEEEEeeeeEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888777666554
No 132
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=99.68 E-value=5.7e-17 Score=136.78 Aligned_cols=119 Identities=17% Similarity=0.276 Sum_probs=108.4
Q ss_pred HHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEE--EecCCCeeec
Q 010168 83 PYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVS--QLQPNSSFGE 160 (516)
Q Consensus 83 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~--~l~~G~~fGe 160 (516)
++++++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|++|.|+++ ...+|++.++. .+.+|++||+
T Consensus 6 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~fGe 84 (137)
T 1wgp_A 6 SGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFCGD 84 (137)
T ss_dssp CSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBSST
T ss_pred HHHHcCcchhhCCHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEecH
Confidence 46889999999999999999999999999999999999999999999999999965 57788888777 9999999999
Q ss_pred ccc---ccCCC------cceEEEEeeeeeEEEeeccchhhHHHhhhccchh
Q 010168 161 VSI---LCNIP------QPYTVCICELSRLLRIDKQSFTNILEIYFCDGRK 202 (516)
Q Consensus 161 ~~l---l~~~~------~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~ 202 (516)
.++ +.+.+ +.++++|.++|.++.++++.|.+++..+|....+
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~k 135 (137)
T 1wgp_A 85 ELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRSGPS 135 (137)
T ss_dssp HHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHhccccccccccceeEEEEeEEEEEEEECHHHHHHHHHHCHhhHhh
Confidence 985 77664 5789999999999999999999999999876543
No 133
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=99.66 E-value=5.4e-17 Score=149.61 Aligned_cols=130 Identities=15% Similarity=0.233 Sum_probs=121.9
Q ss_pred cHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeec
Q 010168 81 YMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 160 (516)
Q Consensus 81 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe 160 (516)
..++++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+
T Consensus 7 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 7 HQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 86 (227)
T ss_dssp SHHHHTTSTTTSSSCHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESC
T ss_pred HHHHHhcChhhcCCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeee
Confidence 45789999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred cccccCCC-cceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 161 VSILCNIP-QPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 161 ~~ll~~~~-~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.+++.+.+ +.+++.|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 87 ~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 137 (227)
T 3dkw_A 87 AMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTR 137 (227)
T ss_dssp TTTTTTCSBCSSCEEESSCCEEEEEESHHHHHHHSSCTHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999998887776666543
No 134
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=99.66 E-value=3.2e-16 Score=135.05 Aligned_cols=120 Identities=25% Similarity=0.337 Sum_probs=109.8
Q ss_pred HHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 78 QTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 78 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
......+++++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|++|.|+++. +| ..+..+.+|++
T Consensus 33 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~~--~~~~~~~~G~~ 107 (154)
T 3pna_A 33 MAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NN--EWATSVGEGGS 107 (154)
T ss_dssp HHHHHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE---TT--EEEEEECTTCE
T ss_pred HHHHHHHHHhChhhhhCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE---CC--EEEEEecCCCE
Confidence 34566789999999999999999999999999999999999999999999999999999997 44 36788999999
Q ss_pred eeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchh
Q 010168 158 FGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRK 202 (516)
Q Consensus 158 fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~ 202 (516)
||+.+++.+.++.++++|.++|.++.++++.|..++..++...+.
T Consensus 108 fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~~~~~ll~~~~~~~~~ 152 (154)
T 3pna_A 108 FGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRK 152 (154)
T ss_dssp ECCHHHHHCCCCSSEEEESSCEEEEEEEHHHHHHHTHHHHHHC--
T ss_pred eeehHhhcCCCcceEEEECcceEEEEEeHHHHHHHHHhChHHHhh
Confidence 999999999999999999999999999999999999998866554
No 135
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=99.66 E-value=2.8e-16 Score=145.12 Aligned_cols=128 Identities=11% Similarity=0.152 Sum_probs=108.5
Q ss_pred HHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeecc
Q 010168 82 MPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 161 (516)
Q Consensus 82 ~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~ 161 (516)
...+++.++|.++++++++.+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.
T Consensus 10 ~~~lr~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~ 89 (230)
T 3iwz_A 10 TTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEM 89 (230)
T ss_dssp ------------CCHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCG
T ss_pred hhhhhhcchhccCCHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEeh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-CcceEEEEeeeeeEEEeeccchhhHHHhh-----hccchhhhhhhhh
Q 010168 162 SILCNI-PQPYTVCICELSRLLRIDKQSFTNILEIY-----FCDGRKVLTNLLE 209 (516)
Q Consensus 162 ~ll~~~-~~~~tv~a~~~~~l~~l~~~~~~~ll~~~-----~~~~~~~l~~ll~ 209 (516)
+++.+. ++.+++.|.++|.++.++++.|.+++..+ |.....++..+..
T Consensus 90 ~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~ 143 (230)
T 3iwz_A 90 GLFIESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSK 143 (230)
T ss_dssp GGTSCCSBCCSEEEESSCEEEEEEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHH
T ss_pred hhhcCCCCceeEEEEcCcEEEEEEeHHHHHHHHHHhcccCCcHHHHHHHHHHHH
Confidence 999875 78999999999999999999999999999 8777666665544
No 136
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=99.66 E-value=1.8e-16 Score=133.81 Aligned_cols=125 Identities=21% Similarity=0.297 Sum_probs=114.0
Q ss_pred hcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 80 LYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 80 ~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
....+++++|+|.+++++++..+...++.+.|++|++|+++|++++.+|+|.+|.++++..+ ...+.+|++||
T Consensus 8 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-------~~~~~~G~~~G 80 (138)
T 1vp6_A 8 RNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-------PVELGPGAFFG 80 (138)
T ss_dssp HHHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS-------CEEECTTCEEC
T ss_pred HHHHHHHhChhhhcCCHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC-------cceECCCCEee
Confidence 35568999999999999999999999999999999999999999999999999999998632 24789999999
Q ss_pred ccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhcc
Q 010168 160 EVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEGK 211 (516)
Q Consensus 160 e~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~~ 211 (516)
+.+++.+.++..+++|.++|.++.++++.|..++..+|.....++..+..+.
T Consensus 81 ~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~r~ 132 (138)
T 1vp6_A 81 EMALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERR 132 (138)
T ss_dssp HHHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred ehHhccCCCceeEEEECCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998888777766543
No 137
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=99.64 E-value=4.4e-16 Score=152.34 Aligned_cols=128 Identities=20% Similarity=0.332 Sum_probs=120.1
Q ss_pred cHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeec
Q 010168 81 YMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 160 (516)
Q Consensus 81 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe 160 (516)
...+|+++|+|+.++++++..+...++.+.|++|++|+++|++++.+|||.+|.|++++.+.+|++ ++..+.+|++||+
T Consensus 11 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~-~~~~~~~G~~fGe 89 (333)
T 4ava_A 11 RVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVA-IIARALPGMIVGE 89 (333)
T ss_dssp CHHHHTTSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCE-EEEEECTTCEESH
T ss_pred hHHHHhCCHhHhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcE-EEEEecCCCEeeH
Confidence 457899999999999999999999999999999999999999999999999999999998888986 8999999999999
Q ss_pred cccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 161 VSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 161 ~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.+++.+.++.++++|.++|.++.++++.|..++ .+|.....++..+...
T Consensus 90 ~~l~~~~~~~~~v~A~~~~~~~~i~~~~~~~l~-~~p~~~~~~~~~~~~~ 138 (333)
T 4ava_A 90 IALLRDSPRSATVTTIEPLTGWTGGRGAFATMV-HIPGVGERLLRTARQR 138 (333)
T ss_dssp HHHHHTCBCSSEEEESSCEEEEEECHHHHHHHH-HSTTHHHHHHHHHHHH
T ss_pred HHhcCCCCceEEEEEecCEEEEEEcHHHHHHHH-hChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 8998888877766543
No 138
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=99.64 E-value=2.5e-16 Score=145.71 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=113.2
Q ss_pred hcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeecccccc
Q 010168 86 EKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILC 165 (516)
Q Consensus 86 ~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~ 165 (516)
.++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.+++.
T Consensus 13 ~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~ 92 (232)
T 2gau_A 13 LLRDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFA 92 (232)
T ss_dssp GSHHHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHH
T ss_pred cccHhhhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhC
Confidence 36789999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 166 NIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 166 ~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
+.++.++++|.++|.++.++++.|.+++..+|.....++..+..+
T Consensus 93 ~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 137 (232)
T 2gau_A 93 EETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKE 137 (232)
T ss_dssp TSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEecceEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888877766543
No 139
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.63 E-value=8.1e-16 Score=148.08 Aligned_cols=136 Identities=19% Similarity=0.278 Sum_probs=126.9
Q ss_pred HHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEec-CCCCeeeEEEecCC
Q 010168 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVG-EDGSEETVSQLQPN 155 (516)
Q Consensus 77 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~-~~g~~~~l~~l~~G 155 (516)
....+..+++++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++... .+|++..+..+.+|
T Consensus 151 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G 230 (299)
T 3shr_A 151 KHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKG 230 (299)
T ss_dssp HHHHHHHHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETT
T ss_pred HHHHHHHHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCC
Confidence 34567788999999999999999999999999999999999999999999999999999999976 68899999999999
Q ss_pred CeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhccc
Q 010168 156 SSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEGKE 212 (516)
Q Consensus 156 ~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~~~ 212 (516)
++||+.+++.+.++.++++|.++|.++.++++.|..++..+|.....++..+..+..
T Consensus 231 ~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~r~~ 287 (299)
T 3shr_A 231 DWFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAK 287 (299)
T ss_dssp CEECGGGGSSSEECSSEEEESSSEEEEEEEHHHHHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred CEeChHHHhCCCCcceEEEECCCEEEEEEeHHHHHHHHccHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999998888765543
No 140
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=99.62 E-value=1.4e-15 Score=138.28 Aligned_cols=122 Identities=15% Similarity=0.201 Sum_probs=110.4
Q ss_pred cCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCC-
Q 010168 89 SLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNI- 167 (516)
Q Consensus 89 ~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~- 167 (516)
++++.++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.+++.+.
T Consensus 2 ~l~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~ 81 (210)
T 3ryp_A 2 VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQ 81 (210)
T ss_dssp -----CCCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTC
T ss_pred cCCCcCCHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCC
Confidence 5677899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 168 PQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 168 ~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
++.+++.|.++|.++.++.+.|..++..+|.....++..+..+
T Consensus 82 ~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 124 (210)
T 3ryp_A 82 ERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 124 (210)
T ss_dssp BCSSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred CceEEEEECCcEEEEEEcHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998877776666543
No 141
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.62 E-value=1.5e-15 Score=152.55 Aligned_cols=130 Identities=22% Similarity=0.378 Sum_probs=119.7
Q ss_pred HHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCC
Q 010168 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNS 156 (516)
Q Consensus 77 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~ 156 (516)
.......+++++++|++++++++..++..+..+.|++|++|+++|+.++.+|+|++|.|+++. ..+|++..+..+.+|+
T Consensus 139 ~~~~i~~~L~~~~lF~~L~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~ 217 (416)
T 3tnp_B 139 QRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRG 217 (416)
T ss_dssp HHHHHHHHHTTSHHHHTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCC
T ss_pred HHHHHHHHHhCCHhHhcCCHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCC
Confidence 445667899999999999999999999999999999999999999999999999999999998 7889999999999999
Q ss_pred eeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhh
Q 010168 157 SFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNL 207 (516)
Q Consensus 157 ~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~l 207 (516)
+||+.+++.+.++.++++|.++|.++.++++.|..++..++.....++..+
T Consensus 218 ~fGe~all~~~pr~atv~A~~d~~l~~i~r~~f~~ll~~~~~~~~~~~~~~ 268 (416)
T 3tnp_B 218 SFGELALMYNTPKAATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYESF 268 (416)
T ss_dssp EECGGGGTSCCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHHSSSSSSS
T ss_pred EEeeHHHhcCCCcccEEEEccCeEEEEEeehhhhhhhhcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999998887655444333
No 142
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=99.60 E-value=3.8e-15 Score=135.06 Aligned_cols=116 Identities=14% Similarity=0.211 Sum_probs=107.4
Q ss_pred CCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCC----Cc
Q 010168 94 CSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNI----PQ 169 (516)
Q Consensus 94 l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~----~~ 169 (516)
++++++..+...++.+.|++|++|+++|++++.+|||.+|.|+++..+.+|++.++..+.+|++||+.+++.+. ++
T Consensus 1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~ 80 (207)
T 2oz6_A 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQER 80 (207)
T ss_dssp CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBC
T ss_pred CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCc
Confidence 58899999999999999999999999999999999999999999998999999999999999999999999888 89
Q ss_pred ceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 170 PYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 170 ~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
.+++.|.++|.++.++.+.|.+++..+|.....++..+..
T Consensus 81 ~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~ 120 (207)
T 2oz6_A 81 SAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMAD 120 (207)
T ss_dssp CSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ceEEEECCcEEEEEECHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888777666554
No 143
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=99.60 E-value=1.1e-15 Score=128.29 Aligned_cols=115 Identities=19% Similarity=0.258 Sum_probs=104.7
Q ss_pred hcHHHhhcccCccCCCHHHHHHHHHHhhcceeC-CCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 80 LYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFL-PGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 80 ~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~-~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
....+++++++|..++++.+..+...++.+.|+ +|++|+++|++++.+|||++|.|+++. .+|++ ..+.+|++|
T Consensus 13 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~g~~---~~l~~G~~f 87 (134)
T 2d93_A 13 QLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISH--PDGKV---ENLFMGNSF 87 (134)
T ss_dssp HHHHHHHHSSTTTSSCHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEEC--SSSCE---EEECTTCEE
T ss_pred HHHHHHhCCcchhhCCHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEc--CCCcE---EEecCCCcc
Confidence 445678999999999999999999999999999 999999999999999999999999984 56765 558999999
Q ss_pred eccccccCCCcceEE-EEeeeeeEEEeeccchhhHHHhhhcc
Q 010168 159 GEVSILCNIPQPYTV-CICELSRLLRIDKQSFTNILEIYFCD 199 (516)
Q Consensus 159 Ge~~ll~~~~~~~tv-~a~~~~~l~~l~~~~~~~ll~~~~~~ 199 (516)
|+.+++.+.++.+++ .|.++|.++.++++.|..++...+..
T Consensus 88 G~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 129 (134)
T 2d93_A 88 GITPTLDKQYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEKS 129 (134)
T ss_dssp SCCSSSCCEECCSEEEESSSSEEEEEEEHHHHHHHSSCCSSS
T ss_pred ChhHhcCCCcceeEEEEEecceEEEEEeHHHHHHHHHHHHhc
Confidence 999999999998898 99999999999999999998776644
No 144
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.59 E-value=1e-14 Score=139.69 Aligned_cols=131 Identities=19% Similarity=0.295 Sum_probs=118.9
Q ss_pred HHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCC-CeeeEEEecCC
Q 010168 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDG-SEETVSQLQPN 155 (516)
Q Consensus 77 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g-~~~~l~~l~~G 155 (516)
....+..+++++++|..++.+.+..+...++.+.|++|++|+++|++++.+|+|.+|.|++++...+| ++..+..+.+|
T Consensus 151 ~~~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G 230 (291)
T 2qcs_B 151 KRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPS 230 (291)
T ss_dssp HHHHHHHHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTT
T ss_pred HHHHHHHHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCC
Confidence 34566678999999999999999999999999999999999999999999999999999999877666 45789999999
Q ss_pred CeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhh
Q 010168 156 SSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNL 207 (516)
Q Consensus 156 ~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~l 207 (516)
++||+.+++.+.++.+++.|.++|.++.++++.|..++..+|......+..+
T Consensus 231 ~~fGe~~ll~~~~~~~tv~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~~~~~ 282 (291)
T 2qcs_B 231 DYFGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQY 282 (291)
T ss_dssp CEECSGGGTCCCCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTTSHHHH
T ss_pred CEecHHHHcCCCCcceEEEECCcEEEEEEcHHHHHHHhccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987666655444
No 145
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.59 E-value=9.5e-15 Score=140.53 Aligned_cols=125 Identities=23% Similarity=0.257 Sum_probs=114.0
Q ss_pred HHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecC
Q 010168 75 KISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQP 154 (516)
Q Consensus 75 ~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~ 154 (516)
+...+....+++++++|+.++++++..+...++.+.|++|++|+++|++++.+|+|++|.|+++. +| ..+..+.+
T Consensus 31 ~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~---~g--~~~~~~~~ 105 (299)
T 3shr_A 31 ERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EG--VKLCTMGP 105 (299)
T ss_dssp HHHHHHHHHHHHTCTTTTTSCHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEEE---TT--EEEEEECT
T ss_pred HHHHHHHHHHHhhCHHHHcCCHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEEE---CC--EEEEEeCC
Confidence 45566778899999999999999999999999999999999999999999999999999999975 44 57899999
Q ss_pred CCeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhh
Q 010168 155 NSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVL 204 (516)
Q Consensus 155 G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l 204 (516)
|++||+.+++.+.++.++++|.++|.++.++++.|..++...+.......
T Consensus 106 G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~~~~i~~~~~~~~~~~~ 155 (299)
T 3shr_A 106 GKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHTEY 155 (299)
T ss_dssp TCEESCSGGGTTTBCCSEEEESSCEEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeeHhHHhcCCCCCcEEEEcCCeEEEEEcHHHHHHHhhHhHHHHHHHH
Confidence 99999999999999999999999999999999999999998885544433
No 146
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=99.56 E-value=2.7e-15 Score=136.74 Aligned_cols=124 Identities=18% Similarity=0.206 Sum_probs=107.6
Q ss_pred cccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccC
Q 010168 87 KVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCN 166 (516)
Q Consensus 87 ~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~ 166 (516)
.-|+|...++.....+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~ 82 (213)
T 1o5l_A 3 SDKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSS 82 (213)
T ss_dssp ----------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSS
T ss_pred ccccchhhccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcC
Confidence 34788899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred C-CcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 167 I-PQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 167 ~-~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
. ++.+++.|.++|.++.++++.|.+++..+|.....++..+..+
T Consensus 83 ~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 127 (213)
T 1o5l_A 83 EPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLLFFLKDVSEH 127 (213)
T ss_dssp SCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEccceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 6 8999999999999999999999999999998888877776654
No 147
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=99.56 E-value=8.1e-15 Score=137.92 Aligned_cols=120 Identities=14% Similarity=0.196 Sum_probs=108.4
Q ss_pred ccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCC-Cc
Q 010168 91 FKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNI-PQ 169 (516)
Q Consensus 91 f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~-~~ 169 (516)
+..++++++..+...++.+.|++|++|+++|++++.+|||.+|.|+++..+.+|++.++..+.+|++||+.+++.+. ++
T Consensus 54 ~~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~ 133 (260)
T 3kcc_A 54 GKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQER 133 (260)
T ss_dssp -----CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBC
T ss_pred cCCCCHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999888 89
Q ss_pred ceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 170 PYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 170 ~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.++++|.++|.++.++++.|.+++..+|.....++..+..+
T Consensus 134 ~~~~~A~~~~~l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~ 174 (260)
T 3kcc_A 134 SAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 174 (260)
T ss_dssp CSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred ceEEEECCCeEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877776665543
No 148
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.56 E-value=2.1e-14 Score=147.23 Aligned_cols=136 Identities=23% Similarity=0.268 Sum_probs=124.4
Q ss_pred HHHHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCC--eeeEEEe
Q 010168 75 KISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGS--EETVSQL 152 (516)
Q Consensus 75 ~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~--~~~l~~l 152 (516)
+........+++++++|.+++++++..+...+..+.|++|++|+++|++++.+|+|.+|.|+++....+|+ +.++..+
T Consensus 34 ~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~ 113 (469)
T 1o7f_A 34 SEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTL 113 (469)
T ss_dssp HHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEE
T ss_pred HHHHHHHHHHHhCCHhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEc
Confidence 34445667889999999999999999999999999999999999999999999999999999999888886 4889999
Q ss_pred cCCCeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhcc
Q 010168 153 QPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEGK 211 (516)
Q Consensus 153 ~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~~ 211 (516)
.+|++||+.+ +.+.++.++++|.++|.++.++++.|..++..+|.....++..+..+.
T Consensus 114 ~~G~~fGe~~-l~~~~~~~tv~A~~~~~l~~i~~~~~~~l~~~~p~~~~~l~~~~~~~l 171 (469)
T 1o7f_A 114 GIGTAFGESI-LDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYMAGLLAPPYGVM 171 (469)
T ss_dssp CTTCEECGGG-GGTCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGGTTTTSCTTTSCS
T ss_pred cCCCCcchhh-hCCCCccceEEEccceeEEEEcHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999999999999998888776665543
No 149
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.56 E-value=1.6e-14 Score=138.45 Aligned_cols=127 Identities=24% Similarity=0.341 Sum_probs=115.5
Q ss_pred HHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 78 QTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 78 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
......+++++|+|+.++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++. +| ..+..+.+|++
T Consensus 34 ~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~g--~~~~~l~~G~~ 108 (291)
T 2qcs_B 34 MAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NN--EWATSVGEGGS 108 (291)
T ss_dssp HHHHHHHTTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEE---TT--EEEEEECTTCE
T ss_pred HHHHHHHHhcChhhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE---CC--eEEEEcCCCCc
Confidence 34567789999999999999999999999999999999999999999999999999999997 55 56899999999
Q ss_pred eeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 158 FGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 158 fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
||+.+++.+.++.+++.|.++|.++.++++.|..++..++.....++..++.
T Consensus 109 fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (291)
T 2qcs_B 109 FGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLS 160 (291)
T ss_dssp ECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCCceEEEECCCEEEEEEEhHHHHHHHhhhHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988776665554443
No 150
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.56 E-value=7.3e-16 Score=151.89 Aligned_cols=123 Identities=21% Similarity=0.311 Sum_probs=0.8
Q ss_pred HHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeecc
Q 010168 82 MPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 161 (516)
Q Consensus 82 ~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~ 161 (516)
.+.+++.|+|+++++++++.+...++.+.|+|||+|+++||+++.+|+|.+|.++++..+ ...+++|++||+.
T Consensus 227 ~~~l~~~~lf~~ls~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~-------~~~l~~G~~fGe~ 299 (355)
T 3beh_A 227 WQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-------PVELGPGAFFGEM 299 (355)
T ss_dssp HC------------------------------------------------------------------------------
T ss_pred chhhhcccccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEEECC-------eeEECCCCEEeeh
Confidence 347899999999999999999999999999999999999999999999999999998743 2579999999999
Q ss_pred ccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhcc
Q 010168 162 SILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEGK 211 (516)
Q Consensus 162 ~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~~ 211 (516)
+++.+.++.++++|.++|+++.++++++.++++++|.....+.+.+.++.
T Consensus 300 ~~l~~~~~~~~~~A~~~~~l~~i~~~~f~~ll~~~p~~~~~l~~~l~~rl 349 (355)
T 3beh_A 300 ALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERR 349 (355)
T ss_dssp --------------------------------------------------
T ss_pred HHhCCCCcceEEEECccEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888776665543
No 151
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.56 E-value=4.6e-15 Score=138.31 Aligned_cols=122 Identities=25% Similarity=0.329 Sum_probs=110.3
Q ss_pred cHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeec
Q 010168 81 YMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 160 (516)
Q Consensus 81 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe 160 (516)
...++++.|+|++++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++. +|+ .+..+.+|++||+
T Consensus 5 i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~---~~~--~~~~~~~g~~fGe 79 (246)
T 3of1_A 5 LEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV---NDN--KVNSSGPGSSFGE 79 (246)
T ss_dssp HHHHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEES---TTS--CCEEECTTCEECH
T ss_pred HHHHHhcCHhhHhCCHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEE---CCE--EEEecCCCCeeeh
Confidence 45789999999999999999999999999999999999999999999999999999986 444 3689999999999
Q ss_pred cccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhh
Q 010168 161 VSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNL 207 (516)
Q Consensus 161 ~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~l 207 (516)
.+++.+.++.+++.|.++|.++.++++.|..++...+.....+...+
T Consensus 80 ~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (246)
T 3of1_A 80 LALMYNSPRAATVVATSDCLLWALDRLTFRKILLGSSFKKRLMYDDL 126 (246)
T ss_dssp HHHHHTCCCSSEEEESSCEEEEEEEHHHHHHTTTTTTSHHHHHSHHH
T ss_pred hHHhcCCCCCcEEEECCCeEEEEEEhHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999988886555544333
No 152
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=99.55 E-value=2.7e-15 Score=137.51 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=111.4
Q ss_pred HHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccc
Q 010168 83 PYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVS 162 (516)
Q Consensus 83 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ 162 (516)
.+++++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++ .+.+|++.++..+.+|++||+
T Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~-- 80 (220)
T 2fmy_A 4 MRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT-- 80 (220)
T ss_dssp TCSCSSCHHHHTTSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES--
T ss_pred hhhhcChhhhcCCHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC--
Confidence 46789999999999999999999999999999999999999999999999999995 688999999999999999998
Q ss_pred cccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 163 ILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 163 ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
++.+++.|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 81 -----~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~ 123 (220)
T 2fmy_A 81 -----HTRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVLGDL 123 (220)
T ss_dssp -----CSSSEEEESSSEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred -----ccceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999998887777666543
No 153
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.54 E-value=9.5e-15 Score=146.67 Aligned_cols=129 Identities=18% Similarity=0.306 Sum_probs=111.7
Q ss_pred HhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCC------CCeeeEEEe
Q 010168 79 TLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGED------GSEETVSQL 152 (516)
Q Consensus 79 ~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~------g~~~~l~~l 152 (516)
..+..+++++++|..++++++..+...+..+.|++|++|+++|++++.+|||.+|.|+++....+ |++..+..+
T Consensus 263 ~~~~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l 342 (416)
T 3tnp_B 263 KMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARC 342 (416)
T ss_dssp SSSSSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEE
T ss_pred HHHHHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEe
Confidence 34556889999999999999999999999999999999999999999999999999999987665 888899999
Q ss_pred cCCCeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhh
Q 010168 153 QPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNL 207 (516)
Q Consensus 153 ~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~l 207 (516)
.+|++||+.+++.+.++.++++|.++|.++.|+++.|..++..++......+..+
T Consensus 343 ~~G~~fGE~all~~~~r~~tv~A~~~~~ll~I~~~~f~~ll~~~p~i~~~~~~~~ 397 (416)
T 3tnp_B 343 FRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATY 397 (416)
T ss_dssp CTTCEESGGGGTCCSCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTCC----
T ss_pred CCCCEecHHHHhCCCCceeEEEEcCCeEEEEEEHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998886655544443
No 154
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=99.54 E-value=2.8e-15 Score=137.63 Aligned_cols=119 Identities=12% Similarity=0.069 Sum_probs=110.3
Q ss_pred HhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeecccc
Q 010168 84 YIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSI 163 (516)
Q Consensus 84 ~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~l 163 (516)
+++++|+|..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++ .+.+|++.++..+.+|++||
T Consensus 1 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG---- 75 (222)
T 1ft9_A 1 MPPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC---- 75 (222)
T ss_dssp -CCCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE----
T ss_pred CcccchhhhcCCHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec----
Confidence 4678999999999999999999999999999999999999999999999999997 78899999999999999999
Q ss_pred ccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 164 LCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 164 l~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.++.+++.|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 76 ---~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 119 (222)
T 1ft9_A 76 ---MHSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRA 119 (222)
T ss_dssp ---SCSSCEEEESSCEEEEEECHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred ---CCCCEEEEEccceEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 67889999999999999999999999999998888877666543
No 155
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.54 E-value=1.2e-14 Score=144.56 Aligned_cols=130 Identities=21% Similarity=0.304 Sum_probs=117.5
Q ss_pred HHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCC-eeeEEEecCC
Q 010168 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGS-EETVSQLQPN 155 (516)
Q Consensus 77 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~-~~~l~~l~~G 155 (516)
....+..+++++++|..++++++..+...+..+.|++|++|+++|++++.+|||.+|.|++++...+|+ +..+..+++|
T Consensus 242 ~~~~~~~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~G 321 (381)
T 4din_B 242 KRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPS 321 (381)
T ss_dssp HHHHHHHHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTT
T ss_pred HHHHHHHHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCC
Confidence 345667889999999999999999999999999999999999999999999999999999998766655 5679999999
Q ss_pred CeeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhh
Q 010168 156 SSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTN 206 (516)
Q Consensus 156 ~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ 206 (516)
++||+.+++.+.++.+++.|.++|.++.++++.|..++..++......+..
T Consensus 322 d~fGe~all~~~~r~~tv~A~~~~~ll~i~~~~f~~ll~~~~~i~~~~~~~ 372 (381)
T 4din_B 322 DYFGEIALLLNRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILKRNIQR 372 (381)
T ss_dssp CEECTTGGGSCCBCSSEEEESSCBEEEEEEHHHHHHHHCCHHHHHHTTHHH
T ss_pred CEechHHHhCCCCceeEEEEcCCEEEEEEeHHHHHHHHhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888665554433
No 156
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.53 E-value=1.7e-14 Score=143.32 Aligned_cols=127 Identities=27% Similarity=0.348 Sum_probs=115.4
Q ss_pred HHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 78 QTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 78 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
......++++.++|++++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++. +| ..+..+.+|++
T Consensus 125 ~~~i~~~l~~~~lF~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~---~~--~~v~~l~~G~~ 199 (381)
T 4din_B 125 MTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV---NG--EWVTNISEGGS 199 (381)
T ss_dssp HHHHHHHHTTCTTSSSCCHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE---TT--EEEEEEESSCC
T ss_pred HHHHHHHHhCChhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE---CC--eEeeeCCCCCE
Confidence 35567889999999999999999999999999999999999999999999999999999997 44 36788999999
Q ss_pred eeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 158 FGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 158 fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
||+.+++.+.++.++++|.++|.++.++++.|..++..++.....++..++.
T Consensus 200 fGe~all~~~~r~atv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~~~~~L~ 251 (381)
T 4din_B 200 FGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLS 251 (381)
T ss_dssp BCGGGGTSCCBCSSEEEESSSCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEchHHhcCCCcceEEEECCCEEEEEEchHHHHHhhhhhhHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998776665554443
No 157
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.6e-14 Score=133.21 Aligned_cols=119 Identities=18% Similarity=0.399 Sum_probs=108.9
Q ss_pred HHHhcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCC
Q 010168 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNS 156 (516)
Q Consensus 77 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~ 156 (516)
....+..+++++++|..++++.+..+...++.+.|++|++|+++|++++.+|+|.+|.++++.... . .+..+.+|+
T Consensus 119 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~---~-~~~~l~~g~ 194 (246)
T 3of1_A 119 KRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQ---G-VINKLKDHD 194 (246)
T ss_dssp HHHHSHHHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTT---E-EEEEEETTC
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCC---c-eEEEcCCCC
Confidence 345667889999999999999999999999999999999999999999999999999999997322 2 789999999
Q ss_pred eeeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhcc
Q 010168 157 SFGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCD 199 (516)
Q Consensus 157 ~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~ 199 (516)
+||+.+++.+.++.+++.|.++|.++.++++.|..++..+|..
T Consensus 195 ~fGe~~~~~~~~~~~~v~a~~~~~~~~i~~~~f~~ll~~~~~~ 237 (246)
T 3of1_A 195 YFGEVALLNDLPRQATVTATKRTKVATLGKSGFQRLLGPAVDV 237 (246)
T ss_dssp EECHHHHHHTCBCSSEEEESSCEEEEEEEHHHHHHHCTTHHHH
T ss_pred cccHHHHhCCCCcccEEEECCCEEEEEEeHHHHHHHhccHHHH
Confidence 9999999999999999999999999999999999999877643
No 158
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=99.50 E-value=1.9e-14 Score=134.53 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=112.5
Q ss_pred hhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccc
Q 010168 85 IEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSIL 164 (516)
Q Consensus 85 l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll 164 (516)
+.+...+..++++++..+...++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+ ++
T Consensus 11 ~~~~~p~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~--~l 88 (250)
T 3e6c_C 11 CGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGK--LY 88 (250)
T ss_dssp CCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECC--CS
T ss_pred hhhccchhhCCHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEee--ec
Confidence 4444556899999999999999999999999999999999999999999999999999999999999999999999 77
Q ss_pred cCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 165 CNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 165 ~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
.+. +.++++|.++|.++.++++.|..++..+|.....++..+..+
T Consensus 89 ~~~-~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 133 (250)
T 3e6c_C 89 PTG-NNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTK 133 (250)
T ss_dssp CCS-CCEEEEESSSEEEEEECHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred CCC-CceEEEEcccEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 777 999999999999999999999999999998887777666543
No 159
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=99.47 E-value=1.8e-13 Score=126.90 Aligned_cols=118 Identities=13% Similarity=0.146 Sum_probs=104.4
Q ss_pred cCCCHHHHHHHHH--HhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCc
Q 010168 92 KGCSSEFINQIVI--RVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQ 169 (516)
Q Consensus 92 ~~l~~~~l~~l~~--~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~ 169 (516)
++++++++..+.. .++.+.|++|++|+++|++++.+|||.+|.|+++..+.+|++.++..+ +|++||+.+++.+.+.
T Consensus 2 ~~l~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~ 80 (238)
T 2bgc_A 2 SNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETS 80 (238)
T ss_dssp --CHHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCB
T ss_pred CCCCHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCc
Confidence 3678899999885 589999999999999999999999999999999999999999999999 9999999999988864
Q ss_pred --ceEEEEe-eeeeEEEeeccchhhHHHhhhccchhhhhhhhhc
Q 010168 170 --PYTVCIC-ELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLEG 210 (516)
Q Consensus 170 --~~tv~a~-~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~~ 210 (516)
..++.|. ++|.++.++++.|..++..+|.....++..+..+
T Consensus 81 ~~~~~~~a~~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 124 (238)
T 2bgc_A 81 VGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQ 124 (238)
T ss_dssp SCCCEEEECSSEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcceeEEEEEcceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 6777787 5999999999999999999998887777666543
No 160
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=99.43 E-value=2.4e-13 Score=126.49 Aligned_cols=114 Identities=24% Similarity=0.274 Sum_probs=103.6
Q ss_pred HHHHHHHHHHhh---cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCC--cc
Q 010168 96 SEFINQIVIRVH---EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIP--QP 170 (516)
Q Consensus 96 ~~~l~~l~~~~~---~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~--~~ 170 (516)
++++..+..... .+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+.+++.+.+ +.
T Consensus 30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~ 109 (243)
T 3la7_A 30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRF 109 (243)
T ss_dssp HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCC
T ss_pred HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcce
Confidence 567777777777 9999999999999999999999999999999999999999999999999999999998876 45
Q ss_pred eEEEEeeeeeEEEeeccchhhHHHhhhccchhhhhhhhh
Q 010168 171 YTVCICELSRLLRIDKQSFTNILEIYFCDGRKVLTNLLE 209 (516)
Q Consensus 171 ~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~~~~l~~ll~ 209 (516)
++++|.++|.++.++++.|.+++..+|.....++..+..
T Consensus 110 ~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~ 148 (243)
T 3la7_A 110 YHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSS 148 (243)
T ss_dssp EEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EEEEEccceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 899999999999999999999999999888777666554
No 161
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.42 E-value=9.3e-13 Score=135.00 Aligned_cols=121 Identities=18% Similarity=0.298 Sum_probs=107.2
Q ss_pred hcHHHhhcccCccCCCHHHHHHHHHHhhc-ceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 80 LYMPYIEKVSLFKGCSSEFINQIVIRVHE-EFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 80 ~~~~~l~~~~~f~~l~~~~l~~l~~~~~~-~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
.....++++++|..++++.+..+...+.. +.|++|++|+++|++++.+|||.+|.|+++. +|+ .++..+.+|++|
T Consensus 334 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~---~~~-~~~~~l~~G~~f 409 (469)
T 1o7f_A 334 IIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI---YGK-GVVCTLHEGDDF 409 (469)
T ss_dssp HHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEE---TTT-EEEEEEETTCEE
T ss_pred HHHHHHhcCHhhhhCCHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEEE---cCC-eeEEEecCCCEE
Confidence 44678999999999999999999999985 4999999999999999999999999999987 333 378999999999
Q ss_pred eccccccCCCcceEEEEee-eeeEEEeeccchhhHHHhhhccchhhh
Q 010168 159 GEVSILCNIPQPYTVCICE-LSRLLRIDKQSFTNILEIYFCDGRKVL 204 (516)
Q Consensus 159 Ge~~ll~~~~~~~tv~a~~-~~~l~~l~~~~~~~ll~~~~~~~~~~l 204 (516)
|+.+++.+.++.+++.|.+ +|.++.++++.|..++..+|.....+.
T Consensus 410 Ge~~ll~~~~~~~tv~a~~~~~~~~~i~~~~f~~ll~~~p~~~~~l~ 456 (469)
T 1o7f_A 410 GKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 456 (469)
T ss_dssp CGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTCC-----
T ss_pred EEehhhcCCCceEEEEEecCCEEEEEEcHHHHHHHHHHChHHHHHHH
Confidence 9999999999999999998 699999999999999999998766643
No 162
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.40 E-value=1.3e-12 Score=145.99 Aligned_cols=120 Identities=27% Similarity=0.347 Sum_probs=109.8
Q ss_pred hcHHHhhcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecC--CCCeeeEEEecCCCe
Q 010168 80 LYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGE--DGSEETVSQLQPNSS 157 (516)
Q Consensus 80 ~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~--~g~~~~l~~l~~G~~ 157 (516)
.....|+++++|+.+++.++..|+..+.++.|++|++||++||.++.+|+|++|.|.|+.... ++.+..+..+.+|+.
T Consensus 39 ~I~~~Lk~~~~f~~l~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~s 118 (999)
T 4f7z_A 39 IIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTA 118 (999)
T ss_dssp HHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCE
T ss_pred HHHHHHhCCHhhhcCCHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcc
Confidence 344678999999999999999999999999999999999999999999999999999998643 345678899999999
Q ss_pred eeccccccCCCcceEEEEeeeeeEEEeeccchhhHHHhhhccc
Q 010168 158 FGEVSILCNIPQPYTVCICELSRLLRIDKQSFTNILEIYFCDG 200 (516)
Q Consensus 158 fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~ll~~~~~~~ 200 (516)
||+ +++.+.||+++++|.++|.++++++.+|..++..+++..
T Consensus 119 FGE-all~n~pRtaTv~a~~~s~l~~l~r~~F~~i~~~~~e~~ 160 (999)
T 4f7z_A 119 FGE-SILDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYM 160 (999)
T ss_dssp ECG-GGGGTCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred hhh-hhccCCCcceEEEeccceEEEEEEHHHHHHHHHhChHHH
Confidence 999 899999999999999999999999999999998887543
No 163
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=99.35 E-value=1.8e-12 Score=137.41 Aligned_cols=121 Identities=19% Similarity=0.329 Sum_probs=111.2
Q ss_pred HhcHHHhhcccCccCCCHHHHHHHHHHhh-cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 79 TLYMPYIEKVSLFKGCSSEFINQIVIRVH-EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 79 ~~~~~~l~~~~~f~~l~~~~l~~l~~~~~-~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
....+.++++++|.+++++++..+...+. .+.|++|++|+++|++++.+|+|++|.|+++.. |+ .++..+.+|++
T Consensus 28 ~~l~~~L~~~~lF~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~---g~-~il~~l~~Gd~ 103 (694)
T 3cf6_E 28 EIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIY---GK-GVVCTLHEGDD 103 (694)
T ss_dssp HHHHHHHTTCGGGTTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEEET---TT-EEEEEEETTCE
T ss_pred HHHHHHHHcChhhccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEEEe---CC-EEEEEeCCCCE
Confidence 34567899999999999999999999998 689999999999999999999999999999973 44 68999999999
Q ss_pred eeccccccCCCcceEEEEee-eeeEEEeeccchhhHHHhhhccchhh
Q 010168 158 FGEVSILCNIPQPYTVCICE-LSRLLRIDKQSFTNILEIYFCDGRKV 203 (516)
Q Consensus 158 fGe~~ll~~~~~~~tv~a~~-~~~l~~l~~~~~~~ll~~~~~~~~~~ 203 (516)
||+.+++.+.++.++++|.+ +|.++.++++.|..++..+|.....+
T Consensus 104 fGe~al~~~~~~~~tv~A~edd~~ll~I~~~~f~~ll~~~p~l~~~l 150 (694)
T 3cf6_E 104 FGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRL 150 (694)
T ss_dssp ECHHHHHHTCBCSSEEEECSSSEEEEEEEHHHHHHHTTTTCCCCEEE
T ss_pred eehHHHhCCCCceEEEEEeeCceEEEEEeHHHHHHHHHHCHHHHHHH
Confidence 99999999999999999999 59999999999999999999887665
No 164
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=99.35 E-value=2.4e-12 Score=115.32 Aligned_cols=81 Identities=22% Similarity=0.293 Sum_probs=78.5
Q ss_pred ceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeeccc
Q 010168 109 EFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQS 188 (516)
Q Consensus 109 ~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~ 188 (516)
+.|++|++|+++|++++.+|+|.+|.|+++..+.+|++.++..+.+|++||+ +++.+.++.+++.|.++|.++.++++.
T Consensus 2 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge-~~~~~~~~~~~~~A~~~~~v~~i~~~~ 80 (195)
T 3b02_A 2 KRFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE-EALEGKAYRYTAEAMTEAVVQGLEPRA 80 (195)
T ss_dssp EEECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG-GGGTCSBCSSEEEESSSEEEEEECGGG
T ss_pred eEcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech-hhhCCCCceeEEEECCcEEEEEEcHHH
Confidence 5799999999999999999999999999999899999999999999999999 999999999999999999999999999
Q ss_pred hh
Q 010168 189 FT 190 (516)
Q Consensus 189 ~~ 190 (516)
|.
T Consensus 81 ~~ 82 (195)
T 3b02_A 81 MD 82 (195)
T ss_dssp CC
T ss_pred cC
Confidence 98
No 165
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=99.25 E-value=9.3e-12 Score=112.13 Aligned_cols=86 Identities=24% Similarity=0.292 Sum_probs=78.9
Q ss_pred HHHhhcceeCCCCeEEecCCcc--CeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeee
Q 010168 103 VIRVHEEFFLPGEVIMEQGNVV--DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSR 180 (516)
Q Consensus 103 ~~~~~~~~~~~ge~i~~~g~~~--~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~ 180 (516)
...++.+.|++|++|+++|+++ +.+|+|.+|.|+++..+.+|++.++..+.+|++||+ +++.+.++..++.|.++|.
T Consensus 2 ~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~-~~l~~~~~~~~~~A~~~~~ 80 (202)
T 2zcw_A 2 TQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGE-EALFGQERIYFAEAATDVR 80 (202)
T ss_dssp ----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECT-HHHHTCCBCSEEEESSCEE
T ss_pred CccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeee-hhcCCCCcceEEEEcccEE
Confidence 4567889999999999999999 999999999999999999999999999999999999 8888999999999999999
Q ss_pred EEEeeccchh
Q 010168 181 LLRIDKQSFT 190 (516)
Q Consensus 181 l~~l~~~~~~ 190 (516)
++.+ .+.|.
T Consensus 81 v~~i-~~~~~ 89 (202)
T 2zcw_A 81 LEPL-PENPD 89 (202)
T ss_dssp EEEC-CSSCC
T ss_pred EEEE-hHhcC
Confidence 9999 88886
No 166
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.22 E-value=3.4e-11 Score=134.54 Aligned_cols=115 Identities=19% Similarity=0.271 Sum_probs=102.4
Q ss_pred HhcHHHhhcccCccCCCHHHHHHHHHHhhcce-eCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 79 TLYMPYIEKVSLFKGCSSEFINQIVIRVHEEF-FLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 79 ~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~-~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
......+.++|.|+.++...+..++..+.... +++|++|++|||.++.+|||++|.|.|++ +++ ..+..+++|++
T Consensus 333 e~l~e~L~~i~~f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~---~~~-~~v~~L~~Gd~ 408 (999)
T 4f7z_A 333 EIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI---YGK-GVVCTLHEGDD 408 (999)
T ss_dssp HHHHHHHTTCGGGTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEE---TTT-EEEEEEETTCE
T ss_pred HHHHHHHHhhHHHhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEE---cCC-cceEEecCCCc
Confidence 34567799999999999999999999888755 47899999999999999999999999986 222 35788999999
Q ss_pred eeccccccCCCcceEEEEeee-eeEEEeeccchhhHHHhhh
Q 010168 158 FGEVSILCNIPQPYTVCICEL-SRLLRIDKQSFTNILEIYF 197 (516)
Q Consensus 158 fGe~~ll~~~~~~~tv~a~~~-~~l~~l~~~~~~~ll~~~~ 197 (516)
||+.+++.+.|+.+|++|.++ |+++++++++|..++....
T Consensus 409 FGElALL~~~PR~aTV~a~~d~c~fl~i~k~df~~il~~~e 449 (999)
T 4f7z_A 409 FGKLALVNDAPRAASIVLREDNCHFLRVDKEDGNRILRDVE 449 (999)
T ss_dssp ECGGGGTCSCBCSSEEEESSSSEEEEEEEHHHHHHHHHHHH
T ss_pred ccchhhccCCCeeEEEEEecCceEEEEeeHHHHHHHHhHHH
Confidence 999999999999999999885 9999999999999997654
No 167
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=96.56 E-value=0.00075 Score=60.97 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=43.9
Q ss_pred CCCCCchhhHHHHHHHHHHHHhhhceeeEEeCCceEEeechhHHHHHHhhhhhHHHhhccCCHHHHH
Q 010168 8 GLPENLSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDVIY 74 (516)
Q Consensus 8 ~~~~~~~~~~~~~d~~f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~~f~~d~~~~~P~~~~~ 74 (516)
.....+.++|++++++|.+|++++|+++.- .++|+|+ +++|+++.+|+....
T Consensus 36 ~~~~~l~~~d~~~~~iF~~e~~lr~~~~~~--------------~~~y~~~-~iiDllailP~~~~~ 87 (223)
T 1orq_C 36 EYLVRLYLVDLILVIILWADYAYRAYKSGD--------------PAGYVKK-TLYEIPALVPAGLLA 87 (223)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHTTSC--------------HHHHHHH-HHHHCTTHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHccccc--------------HHHHHHH-hHHHHHHHHHHHHHH
Confidence 335568899999999999999999998631 3799998 999999999998653
No 168
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=93.11 E-value=0.013 Score=59.58 Aligned_cols=49 Identities=20% Similarity=0.420 Sum_probs=41.3
Q ss_pred CCchhhHHHHHHHHHHHHhhhceeeEEeCCceEEeechhHHHHHHhhh-hhHHHhhccCCHHHH
Q 010168 11 ENLSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKS-SFIIDLLSCLPWDVI 73 (516)
Q Consensus 11 ~~~~~~~~~~d~~f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~-~f~~d~~~~~P~~~~ 73 (516)
..|.++|+++.++|.+|++++|+++-- .++|+++ |+++|+++.+|+.+.
T Consensus 239 ~~l~~ie~i~~~iFtiE~ilR~~~~~~--------------k~~Y~ks~wniiDli~iip~~i~ 288 (514)
T 2r9r_B 239 DPFFIVETLCIIWFSFEFLVRFFACPS--------------KAGFFTNIMNIIDIVAIIPYYVT 288 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSSC--------------SSSSTTSHHHHHHHHTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCc--------------HHHHHhchhHHHHHHHHHHHHHH
Confidence 448899999999999999999997521 1479999 899999999998653
No 169
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=89.35 E-value=0.12 Score=42.01 Aligned_cols=45 Identities=16% Similarity=0.270 Sum_probs=38.3
Q ss_pred chhhHHHHHHHHHHHHhhhceeeEEeCCceEEeechhHHHHHHhhhhhHHHhhccCCHHH
Q 010168 13 LSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDV 72 (516)
Q Consensus 13 ~~~~~~~~d~~f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~~f~~d~~~~~P~~~ 72 (516)
+.++|+++-++|.+|+++.+..+- + .++|++ |-++|+++.+|+..
T Consensus 39 l~~~d~~~~~iFt~E~~lRl~~~~----------~----~~~y~~-~niiDllailp~~~ 83 (132)
T 1ors_C 39 LYLVDLILVIILWADYAYRAYKSG----------D----PAGYVK-KTLYEIPALVPAGL 83 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----------S----TTTTTT-TCGGGTGGGSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC----------C----HHHHHH-HHHHHHHHHHHHHH
Confidence 778999999999999999999641 1 257899 99999999999864
No 170
>2dnf_A Doublecortin domain-containing protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=85.39 E-value=0.58 Score=36.15 Aligned_cols=47 Identities=13% Similarity=0.369 Sum_probs=41.1
Q ss_pred CcHHHHHHHHhhhcCCCC--CCcccccCCceEEEEeeeecCCeEEEeecC
Q 010168 468 HNIEELIKLAVDKLDFPD--GHSILSEDGGKILDVDMINDGQKLYLISET 515 (516)
Q Consensus 468 ~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~i~d~~~~~~~~~~~~~~~~ 515 (516)
.+++.+++...++++++. -+++.+.+|.+|.+++-+.||+ .||+++.
T Consensus 40 ~sfe~lL~~lT~~v~l~~GaVr~Lyt~~G~~V~~l~dl~dg~-~YVa~g~ 88 (108)
T 2dnf_A 40 NQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQ-FYVAVGR 88 (108)
T ss_dssp TCHHHHHHHHHHHCCCTTSSCCEEEETTCCEESSTTSCCSSC-BEEEECS
T ss_pred cCHHHHHHHHHHhhCCCCCCEEEEEcCCCCEeCCHHHhCCCC-EEEEeCC
Confidence 779999999999999884 5789999999999988888888 8888874
No 171
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=81.98 E-value=0.47 Score=39.11 Aligned_cols=46 Identities=15% Similarity=0.285 Sum_probs=38.4
Q ss_pred chhhHHHHHHHHHHHHhhhceeeEEeCCceEEeechhHHHHHHhhhhhHHHhhccCCHHHH
Q 010168 13 LSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDVI 73 (516)
Q Consensus 13 ~~~~~~~~d~~f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~~f~~d~~~~~P~~~~ 73 (516)
+.++|.++-++|.+|+++.+..+- + .++|+++ -++|+++.+|+...
T Consensus 54 ~~~id~~~~~iF~~Ey~lRl~~a~----------~----k~~f~~~-~iiDllailP~~~~ 99 (147)
T 2kyh_A 54 LYLVDLILVIILWADYAYRAYKSG----------D----PAGYVKK-TLYEIPALVPAGLL 99 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT----------C----HHHHHHH-STTTHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC----------c----HHHHHHH-HHHHHHHHHHHHHH
Confidence 778999999999999999999652 1 2578887 78999999998743
No 172
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=72.19 E-value=13 Score=32.71 Aligned_cols=70 Identities=11% Similarity=0.160 Sum_probs=50.8
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRID 185 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~ 185 (516)
+....++||+.+-..--+.+.+++|++|.+++.. +|+. ..+.+|+++-- ....+..+.+.+++.++.+.
T Consensus 39 ~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i---~~~~---~~l~~Gd~~~~-----p~~~~H~~~a~~~~~~l~i~ 107 (227)
T 3rns_A 39 ISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI---ENNK---KTISNGDFLEI-----TANHNYSIEARDNLKLIEIG 107 (227)
T ss_dssp EEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE---SSCE---EEEETTEEEEE-----CSSCCEEEEESSSEEEEEEE
T ss_pred EEEEEECCCCccCccccCCCEEEEEEeCEEEEEE---CCEE---EEECCCCEEEE-----CCCCCEEEEECCCcEEEEEE
Confidence 3456789999998888889999999999999986 4443 56888886331 22234556677788877664
Q ss_pred c
Q 010168 186 K 186 (516)
Q Consensus 186 ~ 186 (516)
.
T Consensus 108 ~ 108 (227)
T 3rns_A 108 E 108 (227)
T ss_dssp E
T ss_pred e
Confidence 3
No 173
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=71.01 E-value=8.9 Score=38.61 Aligned_cols=143 Identities=17% Similarity=0.100 Sum_probs=77.7
Q ss_pred HHHHHHHHhcCCHHHHHHHH----HcCCCCCCCCCCCCcHHHHHHHcC-C-------------HHHHHHHHHcCCCCcCC
Q 010168 236 ALRVNSAAYHGDLYQLKGLI----RAGADPNKTDYDGRSPLHLATSRG-Y-------------EDITLFLIQKGVDINIK 297 (516)
Q Consensus 236 ~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~Lh~A~~~g-~-------------~~~v~~Ll~~g~~~~~~ 297 (516)
...|...++.|+.+-...++ +.|..||.. -.+.|..|+..+ . .++.+.+.+.|..||..
T Consensus 30 ~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~---tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ 106 (501)
T 4g26_A 30 KQKLDMCSKKGDVLEALRLYDEARRNGVQLSQY---HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEA 106 (501)
T ss_dssp HHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHH---HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHh---HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHH
Confidence 44456667777766444433 457666532 234555555322 1 23555556677766543
Q ss_pred CCCCChHHHHHHHcCChHHH----HHHHHcCCCCCcCCcchHHHHHHHcCCHHHHHHH----HHCCCCCCCCCCCCCcHH
Q 010168 298 DKFGNTPLLEAIKCGHDGVT----SLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRV----LSNGVDPSSRDYDHRTPL 369 (516)
Q Consensus 298 d~~g~tpL~~A~~~~~~~~v----~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~L----l~~g~~~~~~~~~g~t~L 369 (516)
. -.+.+...++.|+.+-+ +.+.+.|..++.....+.+...+..|..+-+..+ .+.|..++.... .+.+
T Consensus 107 t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty--~~Li 182 (501)
T 4g26_A 107 T--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPEL--AALL 182 (501)
T ss_dssp H--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHH--HHHH
T ss_pred H--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHH--HHHH
Confidence 2 12345556677776543 3444567776665555667777777877544444 456665544322 2344
Q ss_pred HHHHHhChHHHHHHHH
Q 010168 370 HVAASEGLYLMAKLLL 385 (516)
Q Consensus 370 ~~A~~~g~~~~v~~Ll 385 (516)
...+..|+.+-+..++
T Consensus 183 ~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 183 KVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHhhCCCHHHHHHHH
Confidence 4556677766444444
No 174
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=70.71 E-value=17 Score=27.66 Aligned_cols=64 Identities=20% Similarity=0.232 Sum_probs=39.2
Q ss_pred eeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEe
Q 010168 110 FFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRI 184 (516)
Q Consensus 110 ~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l 184 (516)
.+++|..+-....+...+++|++|.+.+.. +|+ ...+.+|+.+- +-.+.++. ..+.+++.++.+
T Consensus 44 ~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i---~~~---~~~l~~Gd~i~---i~~~~~H~--~~~~~~~~~~~i 107 (114)
T 2ozj_A 44 SFADGESVSEEEYFGDTLYLILQGEAVITF---DDQ---KIDLVPEDVLM---VPAHKIHA--IAGKGRFKMLQI 107 (114)
T ss_dssp EEETTSSCCCBCCSSCEEEEEEEEEEEEEE---TTE---EEEECTTCEEE---ECTTCCBE--EEEEEEEEEEEE
T ss_pred EECCCCccccEECCCCeEEEEEeCEEEEEE---CCE---EEEecCCCEEE---ECCCCcEE--EEeCCCcEEEEE
Confidence 456666554444556789999999999875 443 45689998643 22234443 334455555544
No 175
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=70.25 E-value=19 Score=27.67 Aligned_cols=47 Identities=13% Similarity=0.060 Sum_probs=35.4
Q ss_pred hcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 107 HEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 107 ~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
....++||..+-..-.+...+++|++|.+++.. +|+ ...+.+|+.+-
T Consensus 39 ~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i~ 85 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV---DGA---QRRLHQGDLLY 85 (114)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEESCEEEEE---TTE---EEEECTTEEEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEECEEEEEE---CCE---EEEECCCCEEE
Confidence 345678888877666667899999999999876 443 36788998643
No 176
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=69.52 E-value=34 Score=26.49 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=43.3
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeecc
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQ 187 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~ 187 (516)
...+.||..+-.. ...+++++|++|.+.+.. +|+ ...+.+||.+-- -.+.+...... .+.+.++.+...
T Consensus 44 ~~~~~pG~~~~~H-~~~~E~~~Vl~G~~~~~~---~g~---~~~l~~GD~v~i---p~g~~H~~~~~-~~~~~~l~v~~P 112 (119)
T 3lwc_A 44 YGRYAPGQSLTET-MAVDDVMIVLEGRLSVST---DGE---TVTAGPGEIVYM---PKGETVTIRSH-EEGALTAYVTYP 112 (119)
T ss_dssp EEEECTTCEEEEE-CSSEEEEEEEEEEEEEEE---TTE---EEEECTTCEEEE---CTTCEEEEEEE-EEEEEEEEEEEC
T ss_pred EEEECCCCCcCcc-CCCCEEEEEEeCEEEEEE---CCE---EEEECCCCEEEE---CCCCEEEEEcC-CCCeEEEEEECC
Confidence 3567788766554 377899999999999976 454 356899997542 22333333322 255555554443
Q ss_pred ch
Q 010168 188 SF 189 (516)
Q Consensus 188 ~~ 189 (516)
.+
T Consensus 113 ~w 114 (119)
T 3lwc_A 113 HW 114 (119)
T ss_dssp C-
T ss_pred CC
Confidence 33
No 177
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=58.48 E-value=43 Score=25.19 Aligned_cols=47 Identities=13% Similarity=0.049 Sum_probs=32.9
Q ss_pred hcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 107 HEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 107 ~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
....++||..+-..-.....+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 43 ~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~~ 89 (115)
T 1yhf_A 43 TVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI---DQE---TYRVAEGQTIV 89 (115)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESEEEEEE---TTE---EEEEETTCEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeCEEEEEE---CCE---EEEECCCCEEE
Confidence 345667887765444446789999999999875 443 35688988753
No 178
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=55.18 E-value=14 Score=31.17 Aligned_cols=52 Identities=23% Similarity=0.236 Sum_probs=37.7
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+....+.||......-..++.+++|++|.+++...+.+|. ....+.+||.+-
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~--~~~~l~~GDv~~ 94 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGR--DTYKLDQGDAIK 94 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEE--EEEEEETTEEEE
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCc--EEEEECCCCEEE
Confidence 3455778887765543446899999999999987666553 356899999754
No 179
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.31 E-value=6.1 Score=29.11 Aligned_cols=56 Identities=20% Similarity=0.300 Sum_probs=37.9
Q ss_pred ccceEEEcCCcHHHHHHHHhhhcCCCC--CCcccccCCceEEE---EeeeecCCeEEEeec
Q 010168 459 RHGIVLWVPHNIEELIKLAVDKLDFPD--GHSILSEDGGKILD---VDMINDGQKLYLISE 514 (516)
Q Consensus 459 ~~~~~~~~p~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~i~d---~~~~~~~~~~~~~~~ 514 (516)
+..+.-....+++||+.-+.++|+++. .+-++.+||-+++| +..+-|+-.|.+...
T Consensus 19 Rs~k~GV~A~sL~EL~~K~~~~l~l~~~~~~lvLeeDGT~VddEeyF~tLp~nT~lmvL~~ 79 (91)
T 2eel_A 19 RSSRRGVMASSLQELISKTLDALVIATGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEK 79 (91)
T ss_dssp SCCCEEEEESSHHHHHHHHHHHTTCSSSCEEEEETTTCCBCCCHHHHTTSCSSEEEEEEET
T ss_pred CCeEEeEEcCCHHHHHHHHHHHhcCCCCCcEEEEeeCCcEEechhhhhhCCCCCEEEEEcC
Confidence 344455567899999999999999853 33446677777755 445556665555544
No 180
>1ibx_B Chimera of IGG binding protein G and DNA fragmentation factor 45; DFF40, DFF45, protein-protein complex, CIDE, CIDE domain complex; HET: DNA; NMR {Streptococcus SP} SCOP: d.15.2.1
Probab=52.73 E-value=9.5 Score=30.53 Aligned_cols=55 Identities=20% Similarity=0.196 Sum_probs=38.8
Q ss_pred ceEEEcCCcHHHHHHHHhhhcCCCCC----CcccccCCceEEE---EeeeecCCeEEEeecC
Q 010168 461 GIVLWVPHNIEELIKLAVDKLDFPDG----HSILSEDGGKILD---VDMINDGQKLYLISET 515 (516)
Q Consensus 461 ~~~~~~p~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~i~d---~~~~~~~~~~~~~~~~ 515 (516)
.+.-....+++||+.-+.++|+++.. +-++.+||-+++| +..+-||-+|.+..+.
T Consensus 75 ~KkGV~A~SL~EL~~K~~~kL~l~~~~~~~~LvLeeDGTeVddEeYF~tLp~nT~LmvL~~g 136 (145)
T 1ibx_B 75 EQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKFVALASN 136 (145)
T ss_dssp SBCCCCCSSHHHHHHHHHHHHTCSCTTSCCEEEETTTCCBCSSHHHHHHSCSSCBEEEECSS
T ss_pred eEEeEEcCCHHHHHHHHHHHhcCCCCccccEEEEeeCCcEEechhHhhcCCCCCEEEEECCC
Confidence 33345678999999999999999652 4456677777755 5566677766666543
No 181
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=51.09 E-value=26 Score=34.80 Aligned_cols=52 Identities=12% Similarity=0.063 Sum_probs=37.0
Q ss_pred cceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...+.||..+-.-=.+ +..+++|++|.+++...+.+|.......+.+|+++-
T Consensus 342 ~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~v 394 (476)
T 1fxz_A 342 FGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLI 394 (476)
T ss_dssp EEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred EEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEE
Confidence 3445666654333233 679999999999998877777665566799999753
No 182
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=50.92 E-value=22 Score=35.62 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=41.0
Q ss_pred HHhhcceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 104 IRVHEEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 104 ~~~~~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
..+....+.||..+-.-=.+ +..+++|++|.+++...+.+|.......+.+||++-
T Consensus 372 is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 372 LSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp CEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred EEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 34455677888765443333 689999999999998877777755566799999754
No 183
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=49.86 E-value=26 Score=35.08 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=44.3
Q ss_pred HHHHhhcceeCCCCeEEecC-CccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 102 IVIRVHEEFFLPGEVIMEQG-NVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 102 l~~~~~~~~~~~ge~i~~~g-~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+-..+....+.||-++-.-= -.++.+++|++|.+++...+.+|+......+.+||.|-
T Consensus 392 LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v 450 (531)
T 3fz3_A 392 LRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFI 450 (531)
T ss_dssp HTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEE
Confidence 33445567788888765432 33689999999999999888888776778999999764
No 184
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=49.40 E-value=71 Score=23.95 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=32.1
Q ss_pred hcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 107 HEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 107 ~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
....++||..+-..--....+++|++|.+.+.. +|+ ...+.+|+.+
T Consensus 37 ~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~ 82 (116)
T 2pfw_A 37 VKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV---DGV---IKVLTAGDSF 82 (116)
T ss_dssp EEEEECTTEEEEEECCSSEEEEEEEEECEEEEE---TTE---EEEECTTCEE
T ss_pred EEEEECCCCcCCcEECCcceEEEEEeeEEEEEE---CCE---EEEeCCCCEE
Confidence 345677887654333446789999999998875 443 3568999874
No 185
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=49.39 E-value=26 Score=35.02 Aligned_cols=59 Identities=12% Similarity=0.108 Sum_probs=42.2
Q ss_pred HHHHHhhcceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 101 QIVIRVHEEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 101 ~l~~~~~~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.+-..+....+.||..+-.-=.+ ++.+++|++|.+++...+.+|+......+.+|++|=
T Consensus 364 ~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 364 QFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp HHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred ccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 33344556677888765443333 689999999999998877777655456799999754
No 186
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=48.00 E-value=6.2 Score=36.32 Aligned_cols=42 Identities=12% Similarity=0.305 Sum_probs=35.1
Q ss_pred chhhHHHHHHHHHHHHhhhceeeEEeCCceEEeechhHHHHHHhhh-hhHHHhhccCCH
Q 010168 13 LSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKS-SFIIDLLSCLPW 70 (516)
Q Consensus 13 ~~~~~~~~d~~f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~-~f~~d~~~~~P~ 70 (516)
+.++|+++-++|.+|+++.+... + ++|+++ |-++|++..+|.
T Consensus 63 l~~~e~~~~~iF~~E~~lrl~~~------------~----~~y~~~~wn~~Dl~~v~~~ 105 (285)
T 3rvy_A 63 TTLFNQIVITIFTIEIILRIYVH------------R----ISFFKDPWSLFDFFVVAIS 105 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT------------G----GGGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------------h----HHHHcCChHHhHHHHHHHH
Confidence 67899999999999999999863 1 579988 999999976553
No 187
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=47.01 E-value=34 Score=32.43 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=36.4
Q ss_pred cceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...+.||...-..-.. +..+++|++|.+++...+.+|+.. ...+.+||.+-
T Consensus 56 ~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~-~~~l~~GD~~~ 107 (361)
T 2vqa_A 56 YMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE-IADVDKGGLWY 107 (361)
T ss_dssp EEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE-EEEEETTEEEE
T ss_pred EEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE-EEEEcCCCEEE
Confidence 4566788765433334 789999999999998877666533 46899998643
No 188
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=46.46 E-value=32 Score=26.58 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=33.9
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
+....++||..+-..--+...+++|++|.+.+.. +|+ ...+.+|+.+
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~ 89 (126)
T 4e2g_A 43 LNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI---GEE---TRVLRPGMAY 89 (126)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE---TTE---EEEECTTEEE
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE---CCE---EEEeCCCCEE
Confidence 3445678888765555556889999999999876 443 3578888864
No 189
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=45.86 E-value=53 Score=27.12 Aligned_cols=46 Identities=22% Similarity=0.133 Sum_probs=32.0
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||..+-..--....+++|++|.+.+.. +|+ ...+.+|+++-
T Consensus 60 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i~ 105 (167)
T 3ibm_A 60 YFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL---DDR---VEPLTPLDCVY 105 (167)
T ss_dssp EEEECTTCBCCCBBCSSCEEEEEEESEEEEEE---TTE---EEEECTTCEEE
T ss_pred EEEECCCCCCCCccCCCcEEEEEEeCEEEEEE---CCE---EEEECCCCEEE
Confidence 34566776654444457889999999999875 443 46789998743
No 190
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=44.07 E-value=19 Score=26.92 Aligned_cols=54 Identities=20% Similarity=0.165 Sum_probs=38.6
Q ss_pred eEEEcCCcHHHHHHHHhhhcCCCC----CCcccccCCceEEE---EeeeecCCeEEEeecC
Q 010168 462 IVLWVPHNIEELIKLAVDKLDFPD----GHSILSEDGGKILD---VDMINDGQKLYLISET 515 (516)
Q Consensus 462 ~~~~~p~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~i~d---~~~~~~~~~~~~~~~~ 515 (516)
+.-....+++||+.-+.++|+++. .+-++.+||-+++| +..+-||-+|.+....
T Consensus 31 k~GV~A~SL~EL~~K~~~~l~l~~~~~~~~lvLeeDGT~VddEeYF~tLp~nT~lmvL~~g 91 (100)
T 1f2r_I 31 QHGVAASSLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDYFLCLPSNTKFVALACN 91 (100)
T ss_dssp EEEEEESSHHHHHHHHHHHHCCCGGGCSCEEEESSSCCBCCSSSSSSSSCSCCEEEEECSS
T ss_pred EEeEEcCCHHHHHHHHHHHhccCCCCCceEEEEeeCCcEEechhHhhcCCCCCEEEEEcCC
Confidence 555667899999999999999953 24446777777755 5566666666665543
No 191
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=43.57 E-value=56 Score=28.56 Aligned_cols=48 Identities=21% Similarity=0.068 Sum_probs=36.3
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+....++||..+-..-.+...+++|++|.+.+.. +|+ ...+.+|+.+=
T Consensus 155 ~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~g~---~~~l~~Gd~i~ 202 (227)
T 3rns_A 155 MTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV---DGK---PFIVKKGESAV 202 (227)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE---TTE---EEEEETTEEEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE---CCE---EEEECCCCEEE
Confidence 3456789999887665667789999999999876 444 46788998743
No 192
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=43.56 E-value=40 Score=25.10 Aligned_cols=47 Identities=30% Similarity=0.356 Sum_probs=32.7
Q ss_pred hcceeCCCCeEEec--CCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 107 HEEFFLPGEVIMEQ--GNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 107 ~~~~~~~ge~i~~~--g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
....++||..+-.. -.. ...+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 24 ~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~~ 73 (113)
T 2gu9_A 24 AEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH---TQALQAGSLIA 73 (113)
T ss_dssp EEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE---EEEECTTEEEE
T ss_pred EEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEEE
Confidence 34567888876544 334 6789999999999875 343 35688888653
No 193
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=43.48 E-value=89 Score=26.21 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=29.9
Q ss_pred hcccCccCCCHHHHHHHHHHhhcceeCCCCeEEecCCccCeE
Q 010168 86 EKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQL 127 (516)
Q Consensus 86 ~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~ 127 (516)
-++|.|.+++..+.++++.. .+|++|+|+-..++++
T Consensus 12 I~HP~F~n~s~~qAe~~L~~------~~G~~liRPSsk~~~l 47 (178)
T 2xp1_A 12 YKHPLFKNFNVTESENYLRS------STDDFLIRKGSRHGYC 47 (178)
T ss_dssp GGSTTEECCCHHHHHHHHHH------SSCCEEEEECSSTTEE
T ss_pred ccCCCcCCCCHHHHHHHHhc------CCCCEEEeecCCCCcE
Confidence 36799999999999888766 2599999999887764
No 194
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=43.26 E-value=49 Score=24.06 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=31.5
Q ss_pred cceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||..+-..--. ...+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 32 ~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~---~~~l~~Gd~~~ 78 (105)
T 1v70_A 32 LYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE---EALLAPGMAAF 78 (105)
T ss_dssp EEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE---EEEECTTCEEE
T ss_pred EEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEEE
Confidence 4567788776543333 3579999999999875 333 35688988653
No 195
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=42.99 E-value=74 Score=25.11 Aligned_cols=44 Identities=11% Similarity=-0.043 Sum_probs=30.0
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...+.||..-.. ...+.+++|++|.+.+.. +|+. ..+.+||.+-
T Consensus 61 ~~~~~pG~~~~h--~~~~E~~~VLeG~~~l~~---~g~~---~~l~~GD~i~ 104 (133)
T 2pyt_A 61 FMQWDNAFFPWT--LNYDEIDMVLEGELHVRH---EGET---MIAKAGDVMF 104 (133)
T ss_dssp EEEEEEEEEEEE--CSSEEEEEEEEEEEEEEE---TTEE---EEEETTCEEE
T ss_pred EEEECCCCcccc--CCCCEEEEEEECEEEEEE---CCEE---EEECCCcEEE
Confidence 345677733222 236799999999999875 4543 4789999754
No 196
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=42.90 E-value=34 Score=32.77 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=37.1
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
+....+.||...-..-.+...+++|++|.+++...+.+|+.. ...+.+|+++
T Consensus 81 ~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~-~~~l~~GD~~ 132 (385)
T 1j58_A 81 SVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSF-IDDVGEGDLW 132 (385)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEE-EEEEETTEEE
T ss_pred EEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEE-EEEeCCCCEE
Confidence 344567888865443334789999999999998766666632 3478999864
No 197
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=42.63 E-value=68 Score=32.01 Aligned_cols=101 Identities=14% Similarity=0.207 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCcCCCCCCChHHHHHHHcCChH----HHHHH
Q 010168 249 YQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLI----QKGVDINIKDKFGNTPLLEAIKCGHDG----VTSLL 320 (516)
Q Consensus 249 ~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll----~~g~~~~~~d~~g~tpL~~A~~~~~~~----~v~~L 320 (516)
++++.+.+.|..||... -.+.+...+..|+.+-+..++ +.|..|+... -.+.+...++.|..+ +.+.+
T Consensus 91 ~lf~~M~~~G~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHH
Confidence 45666667788776431 234556667888887555554 4677665432 123455566788865 45555
Q ss_pred HHcCCCCCcCCcchHHHHHHHcCCHHHHHHHHH
Q 010168 321 VKEGASLNVDDAGSFLCTAVARGDSDFLKRVLS 353 (516)
Q Consensus 321 l~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 353 (516)
.+.|..++.....+.+...+..|+.+-+..+++
T Consensus 167 ~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 167 VESEVVPEEPELAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 667888877666677888888898876555553
No 198
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=42.62 E-value=38 Score=33.39 Aligned_cols=56 Identities=5% Similarity=0.051 Sum_probs=40.9
Q ss_pred HHhhcceeCCCCeEEecC-CccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 104 IRVHEEFFLPGEVIMEQG-NVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 104 ~~~~~~~~~~ge~i~~~g-~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
..+....+.||-+..-.= -.+..+++|++|.+++...+.+|....-..+.+|+.|=
T Consensus 322 iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v 378 (459)
T 2e9q_A 322 LSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLM 378 (459)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred cceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEE
Confidence 344556667776654332 33689999999999999988888655556899999764
No 199
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=42.50 E-value=53 Score=28.10 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=35.6
Q ss_pred hhcceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCC--CCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGED--GSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~--g~~~~l~~l~~G~~fG 159 (516)
+....+.||...-..-.+ +.++++|++|.+.+...+.+ |.+.....+.+|+.+-
T Consensus 74 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~ 130 (201)
T 1fi2_A 74 MNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFV 130 (201)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEE
T ss_pred EEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEE
Confidence 334567888765433333 57999999999998764432 1333356799998754
No 200
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=41.76 E-value=53 Score=24.37 Aligned_cols=66 Identities=11% Similarity=0.047 Sum_probs=37.2
Q ss_pred CCCCeEEecCCccCeEEEEEeceEEEEEecCCC-CeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeeccc
Q 010168 112 LPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDG-SEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQS 188 (516)
Q Consensus 112 ~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g-~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~ 188 (516)
.+|+...+.-+....+++|++|.+.+.. +| + ...+.+|+.+- +-.+.++... +.+.+.++.+....
T Consensus 36 ~~g~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~~---~~~l~~Gd~~~---ip~~~~H~~~--~~~~~~~l~i~~~~ 102 (107)
T 2i45_A 36 LLGDYGWHTHGYSDKVLFAVEGDMAVDF---ADGG---SMTIREGEMAV---VPKSVSHRPR--SENGCSLVLIELSD 102 (107)
T ss_dssp EEEECCCBCC--CCEEEEESSSCEEEEE---TTSC---EEEECTTEEEE---ECTTCCEEEE--EEEEEEEEEEECC-
T ss_pred CCCCCcceeCCCCCEEEEEEeCEEEEEE---CCCc---EEEECCCCEEE---ECCCCcEeeE--eCCCeEEEEEECCC
Confidence 3454332333323789999999999875 33 3 35689998743 2223444333 33566666665544
No 201
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=41.31 E-value=28 Score=29.16 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=30.3
Q ss_pred hcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 107 HEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 107 ~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
....++||...-..-.....+++|++|.+++.. .+|+ ...+++||.+
T Consensus 82 ~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~l--d~ge---~~~L~~GDsi 128 (172)
T 3es1_A 82 RVVDMLPGKESPMHRTNSIDYGIVLEGEIELEL--DDGA---KRTVRQGGII 128 (172)
T ss_dssp EEEEECTTCBCCCBCCSEEEEEEEEESCEEEEC--GGGC---EEEECTTCEE
T ss_pred EEEEECCCCCCCCeecCceEEEEEEeCEEEEEE--CCCe---EEEECCCCEE
Confidence 344566766433333334568899999999875 1143 3568999986
No 202
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=41.23 E-value=50 Score=31.24 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=35.5
Q ss_pred cceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||..+-..-.+ ..++++|++|.+.+...+.+|+ .....+.+||.+-
T Consensus 238 ~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~-~~~~~l~~GD~~~ 289 (361)
T 2vqa_A 238 LIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGK-ASVSRLQQGDVGY 289 (361)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTC-EEEEEECTTCEEE
T ss_pred EEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCc-EEEEEECCCCEEE
Confidence 3456777765433333 3799999999999987666665 2356789999764
No 203
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=38.45 E-value=71 Score=28.33 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=35.4
Q ss_pred HhhcceeCCCCeEEe-cCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 105 RVHEEFFLPGEVIME-QGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 105 ~~~~~~~~~ge~i~~-~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.+...+++||..+-. +-....+.++|++|+..+.. +|+ ...+++||++-
T Consensus 166 ~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~---~~~---~~~l~~GD~~~ 215 (246)
T 1sfn_A 166 MVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL---EEN---YYPVTAGDIIW 215 (246)
T ss_dssp EEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE---TTE---EEEEETTCEEE
T ss_pred EEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE---CCE---EEEcCCCCEEE
Confidence 355667889887664 33455789999999998875 444 35789999743
No 204
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=37.98 E-value=38 Score=26.23 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=29.7
Q ss_pred eeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 110 FFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 110 ~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...||..-+.. +..+++++|++|.+.+.- .+|. ...+++||.+-
T Consensus 48 e~tPG~~~~~~-~~~~E~~~iLeG~~~lt~--ddG~---~~~l~aGD~~~ 91 (116)
T 3es4_A 48 MAEPGIYNYAG-RDLEETFVVVEGEALYSQ--ADAD---PVKIGPGSIVS 91 (116)
T ss_dssp EECSEEEEECC-CSEEEEEEEEECCEEEEE--TTCC---CEEECTTEEEE
T ss_pred ecCCceeECee-CCCcEEEEEEEeEEEEEe--CCCe---EEEECCCCEEE
Confidence 44566554444 334589999999999874 4554 35689998765
No 205
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=37.84 E-value=28 Score=25.54 Aligned_cols=48 Identities=25% Similarity=0.169 Sum_probs=29.9
Q ss_pred cceeCCCCeEEecCCcc-CeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVV-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~-~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||...-..--+. ..+++|++|.+.+.. .+|. ....+.+|+.+-
T Consensus 22 ~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~g~--~~~~l~~Gd~~~ 70 (97)
T 2fqp_A 22 EWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET--PEGS--VTSQLTRGVSYT 70 (97)
T ss_dssp EEEECTTCBCCSEECCSCEEEEESSCEEEEEEE--TTEE--EEEEECTTCCEE
T ss_pred EEEECCCCCCCCEECCCCcEEEEEeecEEEEEe--CCCC--EEEEEcCCCEEE
Confidence 34567776542222233 359999999999875 2221 245789998754
No 206
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=37.12 E-value=1.3e+02 Score=22.36 Aligned_cols=45 Identities=13% Similarity=0.014 Sum_probs=31.8
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||..-.. -+...+++|++|.+.+.. .+|+ ...+.+||.+-
T Consensus 35 ~~~~~pg~~~~h--H~~~E~~~Vl~G~~~~~i--~~g~---~~~l~~GD~i~ 79 (101)
T 1o5u_A 35 IWEKEVSEFDWY--YDTNETCYILEGKVEVTT--EDGK---KYVIEKGDLVT 79 (101)
T ss_dssp EEEECSEEEEEE--CSSCEEEEEEEEEEEEEE--TTCC---EEEEETTCEEE
T ss_pred EEEeCCCccccc--CCceEEEEEEeCEEEEEE--CCCC---EEEECCCCEEE
Confidence 456778876544 446799999999999875 1143 35689998754
No 207
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=36.61 E-value=54 Score=25.17 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=31.0
Q ss_pred hcceeCCCCeEEecCCcc-CeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 107 HEEFFLPGEVIMEQGNVV-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 107 ~~~~~~~ge~i~~~g~~~-~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
....++||..+-..--.. ..+++|++|.+.+.. .+|+ ...+.+|+.+
T Consensus 42 ~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~~~---~~~l~~Gd~~ 89 (125)
T 3h8u_A 42 VVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ--GNGI---VTHLKAGDIA 89 (125)
T ss_dssp EEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC--STTC---EEEEETTEEE
T ss_pred EEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE--CCCe---EEEeCCCCEE
Confidence 345677887765444443 678899999998853 2343 3567888864
No 208
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=36.08 E-value=56 Score=27.25 Aligned_cols=63 Identities=10% Similarity=0.041 Sum_probs=39.8
Q ss_pred CccCeEEEEEeceEEEEEecCCC---CeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeeccchh
Q 010168 122 NVVDQLYFVCHGVLEEVGVGEDG---SEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQSFT 190 (516)
Q Consensus 122 ~~~~~~y~I~~G~v~i~~~~~~g---~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~ 190 (516)
++.+.++++++|.+.+...+ +| +...-..+.+|+.|-.. .+.++.- ++...+..+.+.+..-.
T Consensus 52 ~~~eE~Fy~lkG~m~l~v~d-~g~~~~~~~dv~i~eGdmfllP---~gvpHsP--~r~~e~v~lviErkR~~ 117 (176)
T 1zvf_A 52 NPTPEWFYQKKGSMLLKVVD-ETDAEPKFIDIIINEGDSYLLP---GNVPHSP--VRFADTVGIVVEQDRPG 117 (176)
T ss_dssp CSSCEEEEEEESCEEEEEEE-CSSSSCEEEEEEECTTEEEEEC---TTCCEEE--EECTTCEEEEEEECCCS
T ss_pred CCCceEEEEEeCEEEEEEEc-CCCcccceeeEEECCCCEEEcC---CCCCcCC--cccCCcEEEEEEecCCC
Confidence 45679999999999998755 34 12334678999987532 2333322 22456777777665543
No 209
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=35.62 E-value=32 Score=33.86 Aligned_cols=52 Identities=23% Similarity=0.236 Sum_probs=39.0
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+....+.||..+...--.++.+++|++|++.+...++++. ....+.+||.+-
T Consensus 88 ~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~--~~~~l~~GDv~~ 139 (445)
T 2cav_A 88 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGR--DTYKLDQGDAIK 139 (445)
T ss_dssp EEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEE--EEEEEETTEEEE
T ss_pred EEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCC--EEEEecCCCEEE
Confidence 3446788887766655557899999999999987665543 467899999754
No 210
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=35.14 E-value=38 Score=26.46 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=29.0
Q ss_pred eeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 110 FFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 110 ~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...||..-.+..+ .+.+++|++|.+.+.. .+|+. ..+++||.+-
T Consensus 55 ~~~pG~~~~~~~~-~~E~~~Vl~G~~~l~~--~~g~~---~~l~~GD~~~ 98 (123)
T 3bcw_A 55 ESTSGSFQSNTTG-YIEYCHIIEGEARLVD--PDGTV---HAVKAGDAFI 98 (123)
T ss_dssp EEEEEEEECCCTT-EEEEEEEEEEEEEEEC--TTCCE---EEEETTCEEE
T ss_pred EECCCceeeEcCC-CcEEEEEEEEEEEEEE--CCCeE---EEECCCCEEE
Confidence 3455655443322 3799999999999873 34542 4689999754
No 211
>1d4b_A CIDE B, human cell death-inducing effector B; alpha/beta roll, apoptosis; NMR {Homo sapiens} SCOP: d.15.2.1
Probab=34.45 E-value=7.8 Score=30.16 Aligned_cols=56 Identities=20% Similarity=0.244 Sum_probs=37.9
Q ss_pred ccceEEEcCCcHHHHHHHHhhhcCCCCCCcc-cccCCceEEE---EeeeecCCeEEEeec
Q 010168 459 RHGIVLWVPHNIEELIKLAVDKLDFPDGHSI-LSEDGGKILD---VDMINDGQKLYLISE 514 (516)
Q Consensus 459 ~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~i~d---~~~~~~~~~~~~~~~ 514 (516)
+..+.-....+++||+.-+.++|+.....++ +.+||-+++| +..+-||-.|.+..+
T Consensus 45 Rs~k~GV~A~SL~EL~~K~~~~l~l~~~~~lvLeeDGT~VddEeYF~tLp~nT~lmvL~~ 104 (122)
T 1d4b_A 45 RTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLQS 104 (122)
T ss_dssp SSCEEEEEECCSSTHHHHHHHHHSCCSSCEEEETTTTEEECSTHHHHHSSSCCCCCEECS
T ss_pred CCeEEeEEcCCHHHHHHHHHHHhccCCCcEEEEEeCCcEEechhHhhcCCCCCEEEEecC
Confidence 4555666789999999999999999744455 5566666655 444555555554443
No 212
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=33.66 E-value=1.4e+02 Score=24.13 Aligned_cols=54 Identities=13% Similarity=0.147 Sum_probs=33.3
Q ss_pred ccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeecc
Q 010168 123 VVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQ 187 (516)
Q Consensus 123 ~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~ 187 (516)
..+.+++|++|.+.+.. +|+ ...+.+||.+--. .+.+.. ..+.+.+..+.+...
T Consensus 83 ~~eE~~yVLeG~~~l~i---~g~---~~~l~~GD~i~iP---~G~~h~--~~n~~~a~~l~V~~P 136 (151)
T 4axo_A 83 NYDEIDYVIDGTLDIII---DGR---KVSASSGELIFIP---KGSKIQ--FSVPDYARFIYVTYP 136 (151)
T ss_dssp SSEEEEEEEEEEEEEEE---TTE---EEEEETTCEEEEC---TTCEEE--EEEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEeEEEEEE---CCE---EEEEcCCCEEEEC---CCCEEE--EEeCCCEEEEEEECC
Confidence 35688999999999985 554 3678999975421 223332 223356666655443
No 213
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=33.64 E-value=54 Score=26.22 Aligned_cols=65 Identities=6% Similarity=0.124 Sum_probs=40.2
Q ss_pred EecCCccCeEEEEEeceEEEEEecC--CCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeecc
Q 010168 118 MEQGNVVDQLYFVCHGVLEEVGVGE--DGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQ 187 (516)
Q Consensus 118 ~~~g~~~~~~y~I~~G~v~i~~~~~--~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~ 187 (516)
++.-+..+.+|+|++|.+.+...+. ++.......+.+|+++--. .+ ....-.|...|.++.+...
T Consensus 44 ~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVP---kG--veH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 44 LEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVP---AE--CWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp EEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEEC---TT--CEEEEEECTTCEEEEEEES
T ss_pred hccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeC---CC--ccCcccCCCceEEEEEEeC
Confidence 3445667899999999999986432 1111234678898875421 11 1233345677888777655
No 214
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=33.58 E-value=57 Score=32.17 Aligned_cols=37 Identities=14% Similarity=0.203 Sum_probs=31.5
Q ss_pred ccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 123 VVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 123 ~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.+..+.+|++|.+++...+.+|+......+.+|+.|-
T Consensus 343 ~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v 379 (466)
T 3kgl_A 343 NANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLS 379 (466)
T ss_dssp SCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEE
Confidence 4678999999999999988888766777899999764
No 215
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=33.17 E-value=1.7e+02 Score=25.82 Aligned_cols=65 Identities=14% Similarity=0.068 Sum_probs=40.7
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRID 185 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~ 185 (516)
...++||...-..- .+.+++|++|.+.+.. +|+ ...+.+|+++-- -.+.++..... +++.++.+.
T Consensus 54 ~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~---~~~---~~~l~~Gd~~~~---p~~~~H~~~n~--~~~~~l~v~ 118 (246)
T 1sfn_A 54 TAEMPAGAQATESV--YQRFAFVLSGEVDVAV---GGE---TRTLREYDYVYL---PAGEKHMLTAK--TDARVSVFE 118 (246)
T ss_dssp EEEECTTCEEECCS--SEEEEEEEEEEEEEEC---SSC---EEEECTTEEEEE---CTTCCCEEEEE--EEEEEEEEE
T ss_pred EEEECCCCcCCCCc--eeEEEEEEECEEEEEE---CCE---EEEECCCCEEEE---CCCCCEEEEeC--CCEEEEEEE
Confidence 35667877655442 7789999999999875 444 356899987442 22344433332 556655543
No 216
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=32.95 E-value=58 Score=32.39 Aligned_cols=54 Identities=7% Similarity=0.075 Sum_probs=38.8
Q ss_pred hhcceeCCCCeEEecC-CccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQG-NVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g-~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+....+.||-+.--.= -.+..+.+|++|.+++...+.+|+...-..+.+|+.|=
T Consensus 360 ~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v 414 (496)
T 3ksc_A 360 AEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALT 414 (496)
T ss_dssp EEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred EEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEE
Confidence 4445556665543222 34679999999999999988888765566899999764
No 217
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=32.83 E-value=66 Score=27.15 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=30.0
Q ss_pred eeCCCCeEE---ecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 110 FFLPGEVIM---EQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 110 ~~~~ge~i~---~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.++||...- ....+...+++|++|.+.+.. .. +.......+.+||.+-
T Consensus 123 ~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~-~~-~~~~~~~~l~~GD~~~ 173 (198)
T 2bnm_A 123 DVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKW-GD-KENPKEALLPTGASMF 173 (198)
T ss_dssp EECCCCGGGCCCCCCCSSCEEEEEEESCEEEEE-SC-TTSCEEEEECTTCEEE
T ss_pred EEcCCCCCcccccccCCCeEEEEEEeeeEEEEE-CC-cCCcccEEECCCCEEE
Confidence 456665443 122334689999999999886 22 1112356799999754
No 218
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=32.52 E-value=76 Score=25.42 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=31.2
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||..+-..--....+++|++|.+.+.. +|+. ...+.+|+.+-
T Consensus 52 ~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~---~~~~--~~~l~~Gd~i~ 98 (147)
T 2f4p_A 52 DVVFEPGARTHWHSHPGGQILIVTRGKGFYQE---RGKP--ARILKKGDVVE 98 (147)
T ss_dssp EEEECTTCEECSEECTTCEEEEEEEEEEEEEE---TTSC--CEEEETTCEEE
T ss_pred EEEECCCCccCceECCCceEEEEEeCEEEEEE---CCEE--EEEECCCCEEE
Confidence 45567777654333344789999999999875 4432 24678988753
No 219
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=32.35 E-value=62 Score=28.13 Aligned_cols=43 Identities=19% Similarity=0.058 Sum_probs=27.7
Q ss_pred CCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 112 LPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 112 ~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+||..+=.--.+.+++|+|++|.+++.. + +|+ ...+++|+.+=
T Consensus 140 ~PG~~yP~HsHp~EEiy~VLsG~~e~~v-~-~g~---~~~l~pGd~v~ 182 (217)
T 4b29_A 140 GPGLDYGWHEHLPEELYSVVSGRALFHL-R-NAP---DLMLEPGQTRF 182 (217)
T ss_dssp CSSCEEEEEECSSEEEEEEEEECEEEEE-T-TSC---CEEECTTCEEE
T ss_pred CCCCcCCCCCCCCceEEEEEeCCEEEEE-C-CCC---EEecCCCCEEE
Confidence 4444333333567899999999998876 1 232 35678888643
No 220
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=32.13 E-value=1.1e+02 Score=24.32 Aligned_cols=50 Identities=14% Similarity=-0.078 Sum_probs=29.7
Q ss_pred ceeCCCCeEEecCC-ccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 109 EFFLPGEVIMEQGN-VVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 109 ~~~~~ge~i~~~g~-~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
..++||..+-..-- ..+.+++|++|.+.+..-+..+.......+.+|+.+
T Consensus 48 ~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i 98 (148)
T 2oa2_A 48 MSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAI 98 (148)
T ss_dssp EEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEE
T ss_pred EEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEE
Confidence 45677765432222 245899999999998862221111112578898864
No 221
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=31.96 E-value=43 Score=27.39 Aligned_cols=43 Identities=7% Similarity=-0.029 Sum_probs=28.8
Q ss_pred eeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 110 FFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 110 ~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
.++||...-..--....+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 50 ~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v---~g~---~~~l~~Gd~i 92 (156)
T 3kgz_A 50 EVDEGGYSTLERHAHVHAVMIHRGHGQCLV---GET---ISDVAQGDLV 92 (156)
T ss_dssp EEEEEEECCCBBCSSCEEEEEEEEEEEEEE---TTE---EEEEETTCEE
T ss_pred EECCCCccCceeCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 445555443333445688999999999875 443 4567888864
No 222
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=31.85 E-value=59 Score=26.68 Aligned_cols=46 Identities=20% Similarity=0.173 Sum_probs=30.4
Q ss_pred cceeCCCCeE--EecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVI--MEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i--~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||... .+.....+.+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 47 ~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---~~~---~~~l~~GD~i~ 94 (163)
T 3i7d_A 47 LVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---DQG---EHPMVPGDCAA 94 (163)
T ss_dssp EEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE---TTE---EEEECTTCEEE
T ss_pred EEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE---CCE---EEEeCCCCEEE
Confidence 4556677643 2222333689999999999886 343 36788988643
No 223
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=31.44 E-value=77 Score=26.41 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=39.7
Q ss_pred CccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEee-eeeEEEeeccchhh
Q 010168 122 NVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICE-LSRLLRIDKQSFTN 191 (516)
Q Consensus 122 ~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~-~~~l~~l~~~~~~~ 191 (516)
++.+.++++++|.+.+...+ +|+ ..-..+.+|+.|=-. .+.++ +-.+.. .+..+.+.+..-..
T Consensus 53 h~~dE~FyvlkG~m~i~v~d-~g~-~~~v~l~eGE~f~lP---~gvpH--~P~r~~~e~~~lviE~~r~~~ 116 (174)
T 1yfu_A 53 DPLEEFFYQLRGNAYLNLWV-DGR-RERADLKEGDIFLLP---PHVRH--SPQRPEAGSACLVIERQRPAG 116 (174)
T ss_dssp CSSCEEEEEEESCEEEEEEE-TTE-EEEEEECTTCEEEEC---TTCCE--EEEBCCTTCEEEEEEECCCTT
T ss_pred CCCceEEEEEeeEEEEEEEc-CCc-eeeEEECCCCEEEeC---CCCCc--CccccCCCCEEEEEEeCCCCC
Confidence 35679999999999988644 343 334688999986532 23333 222344 66777766655443
No 224
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=31.26 E-value=50 Score=27.44 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=23.8
Q ss_pred ccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 123 VVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 123 ~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.+..++||++|.+.+.. +|+ ...+.+|++|-
T Consensus 109 ~gEE~~yVLeG~v~vtl---~g~---~~~L~~Gds~~ 139 (166)
T 2vpv_A 109 RTYITFHVIQGIVEVTV---CKN---KFLSVKGSTFQ 139 (166)
T ss_dssp SEEEEEEEEESEEEEEE---TTE---EEEEETTCEEE
T ss_pred CceEEEEEEEeEEEEEE---CCE---EEEEcCCCEEE
Confidence 45679999999999987 443 35789998755
No 225
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=31.08 E-value=74 Score=24.88 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=30.5
Q ss_pred cceeCCCCeEEecCCc-cCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 108 EEFFLPGEVIMEQGNV-VDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~-~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
...++||..+-..--. ...+++|++|.+.+.. +|+ ...+.+|+.+
T Consensus 61 ~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i 106 (133)
T 1o4t_A 61 RMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NGK---DVPIKAGDVC 106 (133)
T ss_dssp EEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TTE---EEEEETTEEE
T ss_pred EEEECCCCccCceECCCccEEEEEEeCEEEEEE---CCE---EEEeCCCcEE
Confidence 4467788765433233 3689999999999875 343 3568888864
No 226
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=30.72 E-value=67 Score=31.64 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=31.0
Q ss_pred ccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 123 VVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 123 ~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.+..+.+|++|.+++...+.+|+...-..+.+|+.|=
T Consensus 343 ~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfv 379 (465)
T 3qac_A 343 NAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVV 379 (465)
T ss_dssp SCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEE
Confidence 3678999999999999988888766666899999764
No 227
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=30.14 E-value=44 Score=32.23 Aligned_cols=50 Identities=18% Similarity=0.075 Sum_probs=39.8
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
+....+.||..+...--.++.+++|++|+..+...+++|++ ...+.+||.
T Consensus 54 ~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~--~~~l~~GDv 103 (397)
T 2phl_A 54 LVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRR--EYFFLTSDN 103 (397)
T ss_dssp EEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEE--EEEEEESSC
T ss_pred EEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcE--EEEECCCCc
Confidence 44567788888666556788999999999999988776653 578999997
No 228
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=30.03 E-value=1e+02 Score=27.14 Aligned_cols=46 Identities=15% Similarity=0.094 Sum_probs=34.0
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCe
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 157 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~ 157 (516)
+....++||..+-..--+...+++|++|.+.+.. +|+ ...+.+|+.
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~---~~~---~~~l~~Gd~ 81 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV---GDV---TRKMTALES 81 (243)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE---TTE---EEEEETTTC
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE---CCE---EEEECCCCE
Confidence 3445678888776655667889999999999875 443 357889884
No 229
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=29.84 E-value=1.2e+02 Score=25.27 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=29.3
Q ss_pred eeCCCCeEEe--cCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 110 FFLPGEVIME--QGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 110 ~~~~ge~i~~--~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.++||..... -......+++|++|.+.+.. +|+ ...+.+||.+-
T Consensus 110 ~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~---~~~---~~~l~~GD~i~ 155 (192)
T 1y9q_A 110 TLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF---DEQ---WHELQQGEHIR 155 (192)
T ss_dssp EECTTCEEEECCCSTTCEEEEEEEESCEEEEE---TTE---EEEECTTCEEE
T ss_pred EECCCCCccCCCCCCCCEEEEEEEEeEEEEEE---CCE---EEEeCCCCEEE
Confidence 4566665542 22334689999999999876 443 35789999753
No 230
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=29.67 E-value=56 Score=32.24 Aligned_cols=62 Identities=10% Similarity=0.036 Sum_probs=43.3
Q ss_pred HHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCee--------------------eEEEecCCCe
Q 010168 98 FINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEE--------------------TVSQLQPNSS 157 (516)
Q Consensus 98 ~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~--------------------~l~~l~~G~~ 157 (516)
.+..+--.+....+.||.++.-.-..+..+++|++|...+....+++.+. .+..+.+||.
T Consensus 57 ~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv 136 (459)
T 2e9q_A 57 EFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDL 136 (459)
T ss_dssp HHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEE
T ss_pred hhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCE
Confidence 34444444556788999887655556889999999999988766654321 2567888887
Q ss_pred ee
Q 010168 158 FG 159 (516)
Q Consensus 158 fG 159 (516)
|-
T Consensus 137 ~~ 138 (459)
T 2e9q_A 137 LV 138 (459)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 231
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=29.56 E-value=1.6e+02 Score=21.13 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=30.8
Q ss_pred CeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEee
Q 010168 125 DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRID 185 (516)
Q Consensus 125 ~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~ 185 (516)
..+++|++|.+.+.. +|+ ...+.+|+.+- +-.+.++. ..+.+++.++.+.
T Consensus 51 ~e~~~v~~G~~~~~~---~~~---~~~l~~Gd~~~---ip~~~~H~--~~~~~~~~~l~i~ 100 (102)
T 3d82_A 51 DEVFIVMEGTLQIAF---RDQ---NITLQAGEMYV---IPKGVEHK--PMAKEECKIMIIE 100 (102)
T ss_dssp CEEEEEEESEEEEEC---SSC---EEEEETTEEEE---ECTTCCBE--EEEEEEEEEEEEE
T ss_pred cEEEEEEeCEEEEEE---CCE---EEEEcCCCEEE---ECCCCeEe--eEcCCCCEEEEEE
Confidence 789999999998864 343 35678888642 11233333 3334566666654
No 232
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=29.28 E-value=42 Score=27.82 Aligned_cols=44 Identities=14% Similarity=0.043 Sum_probs=29.4
Q ss_pred eeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 110 FFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 110 ~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
.++||..+-..--....+++|++|.+.+.. +|+ ...+.+|+++-
T Consensus 59 ~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v---~g~---~~~l~~GD~i~ 102 (166)
T 3jzv_A 59 EVGPGGHSTLERHQHAHGVMILKGRGHAMV---GRA---VSAVAPYDLVT 102 (166)
T ss_dssp EEEEEEECCCBBCSSCEEEEEEEECEEEEE---TTE---EEEECTTCEEE
T ss_pred EECCCCccCceeCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEEE
Confidence 445665543333445688999999999875 443 45788988653
No 233
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=28.71 E-value=54 Score=26.72 Aligned_cols=45 Identities=11% Similarity=0.075 Sum_probs=30.3
Q ss_pred cceeCCCCe-E-EecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 108 EEFFLPGEV-I-MEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 108 ~~~~~~ge~-i-~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
...++||.. . .+.-.....+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 50 ~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~---~~~l~~Gd~i 96 (162)
T 3l2h_A 50 LIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---END---QYPIAPGDFV 96 (162)
T ss_dssp EEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TTE---EEEECTTCEE
T ss_pred EEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CCE---EEEeCCCCEE
Confidence 356677763 2 2222346789999999999875 443 3678999875
No 234
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=28.26 E-value=71 Score=31.64 Aligned_cols=62 Identities=3% Similarity=-0.134 Sum_probs=44.4
Q ss_pred HHHHHHHHhhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCe---------------------eeEEEecCCC
Q 010168 98 FINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSE---------------------ETVSQLQPNS 156 (516)
Q Consensus 98 ~l~~l~~~~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~---------------------~~l~~l~~G~ 156 (516)
.+..+--.+....+.||..+.-.-..+..+++|++|...+....+++.+ +.+..+.+||
T Consensus 42 ~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GD 121 (476)
T 1fxz_A 42 PFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGD 121 (476)
T ss_dssp HHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTE
T ss_pred hhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCC
Confidence 3444444455678899988765556688999999999998887765542 1367888888
Q ss_pred eee
Q 010168 157 SFG 159 (516)
Q Consensus 157 ~fG 159 (516)
.+-
T Consensus 122 vi~ 124 (476)
T 1fxz_A 122 LIA 124 (476)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 235
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=28.21 E-value=61 Score=31.52 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=38.6
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+....+.||..+...-..++.+++|++|...+...+++ +. ....+.+||.+-
T Consensus 51 ~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~-~~-~~~~l~~GDv~~ 102 (416)
T 1uij_A 51 IVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNND-DR-DSYNLHPGDAQR 102 (416)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSS-CE-EEEEECTTEEEE
T ss_pred EEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECC-CC-eEEEecCCCEEE
Confidence 44567788887666655678999999999999876663 32 356899999753
No 236
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=28.21 E-value=53 Score=24.84 Aligned_cols=45 Identities=9% Similarity=0.046 Sum_probs=28.1
Q ss_pred ceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 109 EFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 109 ~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
..++||...-..--....+++|++|.+.+.. +|+.. ..+.+|+.+
T Consensus 32 ~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~~~--~~l~~Gd~i 76 (117)
T 2b8m_A 32 IVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL---EDQEP--HNYKEGNIV 76 (117)
T ss_dssp EEEETTCBCCCEECSSCEEEEEEESEEEEEE---TTSCC--EEEETTCEE
T ss_pred EEECCCCcCCCEeCCCcEEEEEEeCEEEEEE---CCEEE--EEeCCCCEE
Confidence 3455665542222345678999999998875 44322 267888864
No 237
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=28.12 E-value=1e+02 Score=27.14 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=32.2
Q ss_pred ceeCC-CCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 109 EFFLP-GEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 109 ~~~~~-ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
..++| |..+-..--+...+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 150 ~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i~ 195 (243)
T 3h7j_A 150 AKIPGNGGEMPFHKHRNEQIGICIGGGYDMTV---EGC---TVEMKFGTAYF 195 (243)
T ss_dssp EEECTTTEEEEEECCSSEEEEEECSSCEEEEE---TTE---EEEECTTCEEE
T ss_pred EEECCCCCcCCCEeCCCcEEEEEEECEEEEEE---CCE---EEEECCCCEEE
Confidence 35778 77665544556789999999999875 443 34589999754
No 238
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=27.93 E-value=66 Score=31.48 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=39.2
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+....+.||..+...-..++.+++|++|...+...++++ .....+.+||.+-
T Consensus 63 ~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~--~~~~~l~~GDv~~ 114 (434)
T 2ea7_A 63 VVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDS--RDSYILEQGHAQK 114 (434)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSC--EEEEEEETTEEEE
T ss_pred EEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCC--CEEEEeCCCCEEE
Confidence 445778898887766556789999999999988766443 3456889998754
No 239
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=27.54 E-value=76 Score=24.35 Aligned_cols=45 Identities=9% Similarity=-0.022 Sum_probs=29.5
Q ss_pred ceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 109 EFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 109 ~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
..++||...-..--....+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 39 ~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i---~~~---~~~l~~Gd~~~ 83 (128)
T 4i4a_A 39 CIVRPETKSFRHSHNEYELFIVIQGNAIIRI---NDE---DFPVTKGDLII 83 (128)
T ss_dssp EEECTTEECCCBCCSSEEEEEEEESEEEEEE---TTE---EEEEETTCEEE
T ss_pred EEECCCCccCCEecCCeEEEEEEeCEEEEEE---CCE---EEEECCCcEEE
Confidence 4455665433333346789999999999876 443 45688888643
No 240
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=27.19 E-value=93 Score=29.63 Aligned_cols=50 Identities=12% Similarity=0.007 Sum_probs=33.6
Q ss_pred ceeCCCCeEEecCCcc-CeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 109 EFFLPGEVIMEQGNVV-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 109 ~~~~~ge~i~~~g~~~-~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
..++||...-..-.+. .++++|++|.+++..-..+|+. ....+.+||.+-
T Consensus 262 ~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~-~~~~l~~GD~~~ 312 (385)
T 1j58_A 262 VTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHA-RTFNYQAGDVGY 312 (385)
T ss_dssp EEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEE-EEEEEESSCEEE
T ss_pred EEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcE-EEEEEcCCCEEE
Confidence 3556666654333344 7899999999998875455542 345788999754
No 241
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=27.15 E-value=67 Score=26.16 Aligned_cols=52 Identities=12% Similarity=0.106 Sum_probs=30.9
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCC---CeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDG---SEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g---~~~~l~~l~~G~~fG 159 (516)
...++||..+-..-.....+++|++|.+.+..-+.++ .......+.+|+.+-
T Consensus 45 ~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ 99 (163)
T 1lr5_A 45 LQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFS 99 (163)
T ss_dssp EEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEE
T ss_pred EEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEE
Confidence 3456777654222223567999999999987622110 111356788988643
No 242
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=26.61 E-value=24 Score=30.98 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=28.3
Q ss_pred chhhHHHHHHHHHHHHhhhceeeEEeCCceEEeechhHHHHHHhhh-hhHHHhhccC
Q 010168 13 LSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKS-SFIIDLLSCL 68 (516)
Q Consensus 13 ~~~~~~~~d~~f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~-~f~~d~~~~~ 68 (516)
+.++|+++-++|.+|+++.+... + -.++|.++ |-++|++..+
T Consensus 44 l~~~e~~~~~iF~~E~~lri~~~----~----------~~~~y~~~~wni~D~~~v~ 86 (229)
T 4dxw_A 44 IHLLDYGITIFFVIEILIRFIGE----K----------QKADFFKSGWNIFDTVIVA 86 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----C----------chhHHhcCCcHHHHHHHHH
Confidence 67889999999999999998753 1 13578888 9999976543
No 243
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=26.24 E-value=1.1e+02 Score=23.42 Aligned_cols=46 Identities=15% Similarity=0.106 Sum_probs=28.8
Q ss_pred cceeCCCCeEE--ecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIM--EQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~--~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...++||..+- ..-+....+|+|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 30 ~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~---~~~l~~Gd~i~ 77 (125)
T 3cew_A 30 INHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE---KIELQAGDWLR 77 (125)
T ss_dssp EEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE---EEEEETTEEEE
T ss_pred EEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE---EEEeCCCCEEE
Confidence 34567776542 222333457779999999875 443 35688888643
No 244
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=25.98 E-value=66 Score=24.84 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=29.1
Q ss_pred ceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 109 EFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 109 ~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
..++||...-..--....+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 53 ~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i~ 97 (126)
T 1vj2_A 53 FTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK---EQG---EETVEEGFYIF 97 (126)
T ss_dssp EEEEEEEEEEEECCSSCEEEEEEESEEEEEC---SSC---EEEEETTEEEE
T ss_pred EEECCCCcCCceeCCCcEEEEEEEeEEEEEE---CCE---EEEECCCCEEE
Confidence 4455665543333346789999999998875 343 25678888643
No 245
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=25.94 E-value=57 Score=31.43 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=46.9
Q ss_pred hcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEE-eeeeeEEEee
Q 010168 107 HEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCI-CELSRLLRID 185 (516)
Q Consensus 107 ~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a-~~~~~l~~l~ 185 (516)
....++||+..-..-.....+|+|++|...+.. +|+ ...+++||+|-.-+ +......-.. .+++.++.+.
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V---~ge---~~~~~~GD~~~iP~---g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIV---GGK---RFDWSEHDIFCVPA---WTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEEEE---TTE---EEEECTTCEEEECT---TCCEEEEECCSSCCEEEEEEE
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEEEE---CCE---EEEEeCCCEEEECC---CCeEEeEeCCCCCCeEEEEee
Confidence 445667777766655667789999999986654 454 45689999865322 2222222111 2456666666
Q ss_pred ccchhhHH
Q 010168 186 KQSFTNIL 193 (516)
Q Consensus 186 ~~~~~~ll 193 (516)
...+.+.+
T Consensus 368 D~Pl~~~L 375 (394)
T 3bu7_A 368 DFPVMEKL 375 (394)
T ss_dssp SHHHHHHT
T ss_pred CHHHHHHh
Confidence 55555443
No 246
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=25.36 E-value=55 Score=19.49 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=15.0
Q ss_pred HHHHHHHhcCCHHHHHHHH
Q 010168 237 LRVNSAAYHGDLYQLKGLI 255 (516)
Q Consensus 237 t~L~~A~~~g~~~~v~~Ll 255 (516)
-.+..||..|+.+.++.|-
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 3467889999999988874
No 247
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=24.98 E-value=87 Score=26.65 Aligned_cols=44 Identities=14% Similarity=0.176 Sum_probs=33.3
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
+...+|+||..+-...-.+.++++|++|..+ +.+ ..+.+|+++=
T Consensus 127 v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----de~------~~~~~Gd~~~ 170 (195)
T 2q1z_B 127 ARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----DET------DRFGAGDIEI 170 (195)
T ss_dssp EEEEEECTTCBCCCCCCSSCEEEEEEESEEE----CSS------SEEETTCEEE
T ss_pred EEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----CCc------EEECCCeEEE
Confidence 4567889999998888888999999999854 222 3478888744
No 248
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.94 E-value=2e+02 Score=27.60 Aligned_cols=54 Identities=22% Similarity=0.263 Sum_probs=38.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHcCCCCCCC--------------CCCCCcHHHHHHHcCCHHHHHHHHH
Q 010168 236 ALRVNSAAYHGDLYQLKGLIRAGADPNKT--------------DYDGRSPLHLATSRGYEDITLFLIQ 289 (516)
Q Consensus 236 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--------------~~~g~t~Lh~A~~~g~~~~v~~Ll~ 289 (516)
+.--...+..|+...|+..+..|.|++-+ -.-|.|.+|+|++..+.+++..|+.
T Consensus 23 ~l~ac~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 23 FLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 33344567799999999999998886522 1247777777777777777777765
No 249
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=24.28 E-value=1.1e+02 Score=27.47 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=39.4
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCC-CCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeec
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGED-GSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDK 186 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~-g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~ 186 (516)
...++||..--......+.+.+|++|.+.+.. + |++ ..+.+|+++=..+ +.+.. .+..+++.++.+.+
T Consensus 74 lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l---~~g~~---~~L~~Gds~y~p~---~~~H~--~~N~~~Ar~l~V~k 142 (266)
T 4e2q_A 74 LAKMKEMSSSGLPPQDIERLIFVVEGAVTLTN---TSSSS---KKLTVDSYAYLPP---NFHHS--LDCVESATLVVFER 142 (266)
T ss_dssp EEEECSSEECCCCCTTEEEEEEEEEECEEEEC-----CCC---EEECTTEEEEECT---TCCCE--EEESSCEEEEEEEE
T ss_pred EEEECcCCcCCCCCCCCeEEEEEEEEEEEEEE---CCCcE---EEEcCCCEEEECC---CCCEE--EEeCCCEEEEEEEe
Confidence 44566666532223446789999999999975 3 443 5688998754322 22222 22345666665543
No 250
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=24.26 E-value=78 Score=30.49 Aligned_cols=37 Identities=19% Similarity=0.076 Sum_probs=29.5
Q ss_pred ccCeEEEEEeceEEEEEecC------CCCeeeEEEecCCCeee
Q 010168 123 VVDQLYFVCHGVLEEVGVGE------DGSEETVSQLQPNSSFG 159 (516)
Q Consensus 123 ~~~~~y~I~~G~v~i~~~~~------~g~~~~l~~l~~G~~fG 159 (516)
.+..+++|++|..++...++ +|.......+.+||.|=
T Consensus 259 ~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~v 301 (397)
T 2phl_A 259 KAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFV 301 (397)
T ss_dssp SCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEE
T ss_pred CCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEE
Confidence 36789999999999988776 56556678899999764
No 251
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=23.96 E-value=72 Score=25.58 Aligned_cols=71 Identities=13% Similarity=-0.010 Sum_probs=43.1
Q ss_pred hhcceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEe
Q 010168 106 VHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRI 184 (516)
Q Consensus 106 ~~~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l 184 (516)
+...+++||..+-...-+....++|++|.... ..|....-..+.+|+++-... +..+.. +.+.+.|.++.+
T Consensus 46 ~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~----~~g~~~~~~~~~~Gd~~~~p~---g~~H~p-~~~~e~~~~l~~ 116 (145)
T 2o1q_A 46 TAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDV----RGGKAAGGDTAIAPGYGYESA---NARHDK-TEFPVASEFYMS 116 (145)
T ss_dssp EEEEEECTTEEECCEEESSCEEEEEEEEEEEE----TTCGGGTSEEEESSEEEEECT---TCEESC-CEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCccCCCCCEEEEEEEeEEEE----cCCCEecceEeCCCEEEEECc---CCccCC-eECCCCeEEEEE
Confidence 45678899998887777778889999999874 233322124567888754332 222221 233455655544
No 252
>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A
Probab=23.37 E-value=46 Score=27.66 Aligned_cols=67 Identities=24% Similarity=0.306 Sum_probs=34.1
Q ss_pred HHHHHhhhceeeEEeCCceEEeechhHHHHHHhhhhhHHHhhccCCHHHHHHHHHHhcHHHhhcccCccCCCHHHHHHHH
Q 010168 24 FLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDVIYKISQTLYMPYIEKVSLFKGCSSEFINQIV 103 (516)
Q Consensus 24 f~~di~~~f~t~~~~~~~~~~v~~~~~i~~~Y~~~~f~~d~~~~~P~~~~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~ 103 (516)
=.+||+.||+.. .+ -++ |+-...|+|+..- .+..++-..-=.++..|..=-++.+..++
T Consensus 67 ~vvdIV~~~rL~----et---~f~-Kk~y~~yiK~YmK-------------~i~~kLee~~pe~v~~Fk~~a~~~vK~il 125 (171)
T 1txj_A 67 QVIDIVDSFQLT----ST---SLS-KKEYSVYIKNYMQ-------------KILKYLEEKKPDRVDVFKTKAQPLIKHIL 125 (171)
T ss_dssp EEEHHHHHHTCE----EE---CCC-HHHHHHHHHHHHH-------------HHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred ecceEEEeccee----ec---CCC-HHHHHHHHHHHHH-------------HHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 347999999961 11 234 3456777775432 12222211111344555544456666666
Q ss_pred HHhhccee
Q 010168 104 IRVHEEFF 111 (516)
Q Consensus 104 ~~~~~~~~ 111 (516)
..+.--.|
T Consensus 126 ~~fkd~qF 133 (171)
T 1txj_A 126 TNFDDFEF 133 (171)
T ss_dssp HTGGGCEE
T ss_pred hhCcCccE
Confidence 66555444
No 253
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=22.81 E-value=1e+02 Score=27.87 Aligned_cols=42 Identities=10% Similarity=0.154 Sum_probs=0.0
Q ss_pred CC---eEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 114 GE---VIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 114 ge---~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
|+ ..++ -+..+.+|++++|.+.+-..+ +|+.+. ..+++|++|
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~-V~i~eGemf 83 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRD-VVIRQGEIF 83 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEE-EEECTTEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEe-CCceee-EEECCCeEE
No 254
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=22.63 E-value=99 Score=28.00 Aligned_cols=49 Identities=18% Similarity=0.195 Sum_probs=36.1
Q ss_pred HHhhcceeCCCCeEEe-cCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 104 IRVHEEFFLPGEVIME-QGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 104 ~~~~~~~~~~ge~i~~-~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
..+....++||..+-. +-..-.+.++|++|+..+.. +|+ ...+++||++
T Consensus 191 ~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~---~~~---~~~v~~GD~~ 240 (278)
T 1sq4_A 191 MHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL---NQD---WVEVEAGDFM 240 (278)
T ss_dssp EEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE---TTE---EEEEETTCEE
T ss_pred eEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 3456678899998875 44444588999999998875 454 4678999974
No 255
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=22.58 E-value=1.6e+02 Score=27.87 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=51.1
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEeecc
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRIDKQ 187 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~ 187 (516)
...++||+..-..-..+..+|.|.+|...+.. +|+ .....+||.|---+. ...+..+.+++.++.++-.
T Consensus 283 ~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I---~~~---~~~w~~gD~fvvP~w-----~~h~~~n~~~a~Lf~~~D~ 351 (368)
T 3nw4_A 283 FHRLRAGTETATRNEVGSTVFQVFEGAGAVVM---NGE---TTKLEKGDMFVVPSW-----VPWSLQAETQFDLFRFSDA 351 (368)
T ss_dssp EEEECTTCBCCCEEESSCEEEEEEESCEEEEE---TTE---EEEECTTCEEEECTT-----CCEEEEESSSEEEEEEESH
T ss_pred eEEECCCCccCCeeccccEEEEEEeCcEEEEE---CCE---EEEecCCCEEEECCC-----CcEEEEeCCCEEEEEEeCH
Confidence 34556666655555667789999999998876 443 356899998764332 2234455678888888877
Q ss_pred chhhHHH
Q 010168 188 SFTNILE 194 (516)
Q Consensus 188 ~~~~ll~ 194 (516)
-+.+.+.
T Consensus 352 Pl~~~LG 358 (368)
T 3nw4_A 352 PIMEALS 358 (368)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 6666543
No 256
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=22.14 E-value=96 Score=30.11 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=38.7
Q ss_pred cceeCCCCeEEecCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 108 EEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 108 ~~~~~~ge~i~~~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
...+.||..+.-.--.++.+++|++|.+.+...++++ .....+.+||.|-
T Consensus 48 ~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~--~~~~~l~~GDv~~ 97 (418)
T 3s7i_A 48 QIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNN--RKSFNLDEGHALR 97 (418)
T ss_dssp EEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSC--EEEEEEETTEEEE
T ss_pred EEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCC--EEEEEecCCCEEE
Confidence 3456788887766666889999999999998877654 3467899999764
No 257
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=21.09 E-value=93 Score=27.78 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=38.2
Q ss_pred ceeCCCCeEEecC--CccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeeeccccccCCCcceEEEEeeeeeEEEee
Q 010168 109 EFFLPGEVIMEQG--NVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVCICELSRLLRID 185 (516)
Q Consensus 109 ~~~~~ge~i~~~g--~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~ 185 (516)
..++||...-..- ...+.+++|++|.+.+.. +|+ ...+.+||++--. .+.++.......+.+.++.+.
T Consensus 64 ~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~---~~~L~~Gd~~~~~---~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 64 VTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EGK---TFALSEGGYLYCP---PGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp EEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TTE---EEEEETTEEEEEC---TTCCCEEEECSSSCEEEEEEE
T ss_pred EEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CCE---EEEECCCCEEEEC---CCCCEEEEeCCCCCEEEEEEE
Confidence 4556665443221 224678999999999986 444 3578999875422 233333333223445555443
No 258
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=20.47 E-value=1.1e+02 Score=27.46 Aligned_cols=47 Identities=15% Similarity=0.029 Sum_probs=32.9
Q ss_pred hcceeCCCCeEEe-cCCccCeEEEEEeceEEEEEecCCCCeeeEEEecCCCeee
Q 010168 107 HEEFFLPGEVIME-QGNVVDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 159 (516)
Q Consensus 107 ~~~~~~~ge~i~~-~g~~~~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~fG 159 (516)
....++||..+-. .--...++++|++|.+.+.. +|+ ...+.+||++-
T Consensus 185 ~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i---~~~---~~~l~~GD~i~ 232 (274)
T 1sef_A 185 HILSFEPGASHAYIETHVQEHGAYLISGQGMYNL---DNE---WYPVEKGDYIF 232 (274)
T ss_dssp EEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE---TTE---EEEEETTCEEE
T ss_pred EEEEECCCCccCcceeccCeEEEEEEeCEEEEEE---CCE---EEEECCCCEEE
Confidence 3456788876643 33356789999999999876 443 36789999753
No 259
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=20.02 E-value=1.6e+02 Score=24.71 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=25.4
Q ss_pred CeEEEEEeceEEEEEecCCCCeeeEEEecCCCee
Q 010168 125 DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 158 (516)
Q Consensus 125 ~~~y~I~~G~v~i~~~~~~g~~~~l~~l~~G~~f 158 (516)
..+++|++|.+.+..-+..|+ .....+.+|+.+
T Consensus 97 ~E~~~Vl~G~~~~~i~~~~g~-~~~~~l~~GD~v 129 (190)
T 1x82_A 97 AEVYVALKGKGGMLLQTPEGD-AKWISMEPGTVV 129 (190)
T ss_dssp CEEEEEEESCEEEEEECTTCC-EEEEEECTTCEE
T ss_pred CEEEEEEcCEEEEEEcCcCCc-EEEEEECCCcEE
Confidence 699999999999987554454 345689999974
Done!