BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010169
(516 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5PPG7|EIF2D_RAT Eukaryotic translation initiation factor 2D OS=Rattus norvegicus
GN=Eif2d PE=2 SV=1
Length = 570
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 251/528 (47%), Gaps = 87/528 (16%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG+ +P GLP G+ A+ + GN AP+AVG MS+ + L +GL+GK + + H Y
Sbjct: 113 MLPGVVVPPTGLPQVQQGDLCAIALVGNRAPVAVGVAAMSTAQMLASGLKGKGISVLHTY 172
Query: 61 RDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAAD--------SSNDQKNG 112
+D LW S + S P L DP +DSCE AD S + +
Sbjct: 173 QDHLWRSGDKSSPPAIAPL------DP--------TDSCEEKADLGLHGNLRSLSLEGEE 218
Query: 113 EEGIIDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTE 172
E G + A+ +PNS + +QD DG ++ E
Sbjct: 219 ENGQVPNPEASDDPNSRALSQDSVDGKPLQ-----------------------------E 249
Query: 173 DVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQ 232
+D L++C L AL + VK DLP+ STL +H+ C P G LDIKKSS+KKL+K+LQ
Sbjct: 250 QMDELLEQCFLHALKSRVKKADLPLLTSTLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQ 309
Query: 233 AKSSAGLFVLQLMLVFWLLIRRHLKSQ--ISVKEDKYKKESMLFSVNRGHPDYLSF-KPE 289
H++ + + VKE ES++ +V+ HP SF PE
Sbjct: 310 ----------------------HMQQEQIVQVKELSKGVESIV-AVDWRHPRITSFIVPE 346
Query: 290 KRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDV 349
ASQ V + + +P ++ +Y ++ +F G G SE +
Sbjct: 347 ---PSLASQTVQEGSRE--KPYLPPDIKSLYCVPANMTQLFLESGHKKGSTLEGSEVRRI 401
Query: 350 VFNYIEKENLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-A 408
+ +Y ++ NLV +++V LDP L D + + K ++ L + + +Q A
Sbjct: 402 ITDYAKRNNLVDADNRNLVKLDPILCDCILE---KNEQHLVMKLPWDSLLTRCLKNLQPA 458
Query: 409 HHVVSRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACS 468
+ V G + +++KG L I I + NKK+T + LET+ +DP ++A+ LQ++ S
Sbjct: 459 YQVTFPGQEPIIKKGKLCPIDITLVLKTYNKKVTVVRNLETYGLDPCSVAAILQQRCQAS 518
Query: 469 TTVAELPGKKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 515
T V+ PG K +V +QG I + + L+E++ +P +YI+ L+K +
Sbjct: 519 TIVSPAPGAKDSLQVQVQGNQIHHLGQLLLEEYRLPGKYIQGLEKAPK 566
>sp|P0CL18|EIF2D_RABIT Eukaryotic translation initiation factor 2D OS=Oryctolagus
cuniculus GN=EIF2D PE=1 SV=1
Length = 566
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 250/524 (47%), Gaps = 84/524 (16%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG+ +P GLP G+ A+ + GN AP+A+G MS+ E L +GL+G+ + H Y
Sbjct: 113 MLPGLVVPPAGLPQVQKGDLCAIALVGNRAPVAIGVAAMSTEEMLTSGLKGRGFSVLHTY 172
Query: 61 RDLLWGSVEGHSVPNAGFLEDVVVEDPAFLS----TSQVSDSCEGAADSSNDQKNGEEGI 116
+D LW S + S P+ L V DPA L+ + QV+ +G ++ NGE +
Sbjct: 173 QDHLWRSGDKSSPPSIAPL----VVDPADLNDDKESVQVNPVLQG-----EEEGNGETAL 223
Query: 117 IDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDA 176
+A +A + QD D ++ E +D
Sbjct: 224 SEATSAGGQ------DQDPTDSRTLQ-----------------------------EQMDE 248
Query: 177 YLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSS 236
L +C L AL ++ DLP+ STL +H+ C P G LDIKKSS+KKL+K+LQ
Sbjct: 249 LLQQCFLHALKCRIQKADLPLLTSTLLGSHMFSCCPEGHQLDIKKSSYKKLSKFLQ---- 304
Query: 237 AGLFVLQLMLVFWLLIRRHLKSQ--ISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPA 293
H++ + + VKE ES++ +V+ HP SF PE
Sbjct: 305 ------------------HMQQEQIVQVKELSRGVESVV-AVDWRHPRITSFVIPE---P 342
Query: 294 EKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNY 353
SQ+V + + QP + ++ +Y + +F G G + SE ++ NY
Sbjct: 343 SLTSQSVQEGSRE--QPYRPPDIKPLYCVPASMTLLFQESGHKKGSVLEGSEVRAIIINY 400
Query: 354 IEKENLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVV 412
+K +LV K++V LDP L D L + K ++ L + + ++Q A+ V
Sbjct: 401 AKKNDLVDADNKNLVKLDPVLCDCLLE---KHEQHSIMKLPWDSLVTRCLEKLQPAYQVT 457
Query: 413 SRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA 472
G + VV+KG + I I +R NKK+T + LE + +DP ++A+ LQ++ STTV
Sbjct: 458 FPGQEPVVKKGKICPIDITLAQRASNKKVTVVRNLEAYGLDPGSVAATLQQRCQASTTVT 517
Query: 473 ELPGKKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 515
PG K +V IQG + + + L+E++ +P++YI+ L+ +
Sbjct: 518 PAPGAKDSLQVQIQGNQVHHLGRLLLEEYHLPRKYIQGLEHAPK 561
>sp|Q61211|EIF2D_MOUSE Eukaryotic translation initiation factor 2D OS=Mus musculus
GN=Eif2d PE=2 SV=3
Length = 570
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 243/520 (46%), Gaps = 71/520 (13%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG+ +P GLP G+ A+ + GN AP+A+G MS+ + L +GL+GK + + H Y
Sbjct: 113 MLPGVVVPPTGLPQVQQGDLCAIALVGNRAPVAIGVAAMSTAQMLASGLKGKGVSVLHTY 172
Query: 61 RDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDAD 120
+D LW S + S P L DP +V +G S E G +
Sbjct: 173 QDHLWRSGDKSSPPAIAPL------DPTDSCEEKVHLGLQGNLKSLTLDGEEENGQVPLR 226
Query: 121 NANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDK 180
A+ + +S + +QD DG ++ E +D L +
Sbjct: 227 EASEDTSSRAPSQDSLDGKPLQ-----------------------------EQMDDLLLR 257
Query: 181 CLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLF 240
C L AL + VK DLP+ STL +H+ C P G LDIKKSS+KKL+K+LQ
Sbjct: 258 CFLHALKSRVKKADLPLLTSTLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQ-------- 309
Query: 241 VLQLMLVFWLLIRRHLKSQ--ISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKAS 297
H++ + + VKE ES++ +V+ HP SF PE S
Sbjct: 310 --------------HMQQEQIVQVKELSKGVESIV-AVDWRHPRITSFVIPE---PSLTS 351
Query: 298 QAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKE 357
Q V + + QP ++ +Y ++ +F G G SE ++ +Y ++
Sbjct: 352 QTVQEVSRE--QPYLPPDIKSLYCVPANMTQLFLESGHKKGSTLEGSEVRKIITDYAKRN 409
Query: 358 NLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVSRGS 416
LV +++V LDP L D + + K T++ L + + MQ A+ V G
Sbjct: 410 RLVDADNRNLVKLDPILCDCILE---KNEQHLVTKLPWDCLLTRCLKNMQPAYQVTFPGQ 466
Query: 417 QSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPG 476
+ +++KG L I I + NKK+T + LET+ +DP ++A+ LQ++ ST V+ PG
Sbjct: 467 EPILKKGKLCPIDITLALKTYNKKVTVVRNLETYGLDPCSVAAILQQRCQASTIVSPAPG 526
Query: 477 KKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 515
K +V +QG I + + L+E++ +P +YI+ L+K +
Sbjct: 527 AKDSLQVQVQGNQIHHLGQLLLEEYRLPGKYIQGLEKAPK 566
>sp|Q58CR3|EIF2D_BOVIN Eukaryotic translation initiation factor 2D OS=Bos taurus GN=EIF2D
PE=2 SV=1
Length = 579
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 247/520 (47%), Gaps = 63/520 (12%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG+ +P GLP G+ AV + GN AP+AVG MS+ E L +GL+G+ + H Y
Sbjct: 113 MLPGLVVPPAGLPQVQKGDLCAVALVGNRAPVAVGVAAMSTAEMLASGLKGRGFCVLHSY 172
Query: 61 RDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDAD 120
+D LW S + S P+ L +P LS + + A + Q EE +
Sbjct: 173 QDHLWRSGDKSSPPSIAPL----ALNPPDLSEGKGCVKADTALQGAMRQLTLEE---EVQ 225
Query: 121 NANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDK 180
E + + AT+D G + +VD ++ E +D L
Sbjct: 226 QRCEEKSPSEATEDPGPGGL---------------HVDPMDSKT-----LQEQMDELLQT 265
Query: 181 CLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLF 240
C L AL +V+ DLP+ STL +H+ C P G LDIKKSS+KKL+K+LQ
Sbjct: 266 CFLHALKCSVRKADLPLLTSTLLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQ-------- 317
Query: 241 VLQLMLVFWLLIRRHLKSQISVKEDKYKK--ESMLFSVNRGHPDYLSFK-PEKRPAEKAS 297
H++ + ++ + K ES++ +V+ HP SF PE P S
Sbjct: 318 --------------HMQQEQIIQVQELSKGVESIV-AVDWKHPRITSFVIPEPSP---TS 359
Query: 298 QAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKE 357
Q + + + QP ++ +Y + +F G G + SE V NY +K
Sbjct: 360 QTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSVLEGSEVRTFVINYAKKN 417
Query: 358 NLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVSRGS 416
+LV K++V LDP L D + + K T++ L + ++Q A+ V G
Sbjct: 418 DLVDADNKNLVKLDPILCDCILE---KDEQHTVTKLPWDSLLGRCLEKLQPAYQVTFPGQ 474
Query: 417 QSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPG 476
+ +V+KG + I I ++ NKK+T + LE + +DP ++A+ LQ++ STTV PG
Sbjct: 475 EPIVKKGRICPIDITLAQKASNKKVTVVRNLEAYGLDPRSVAATLQQRCQASTTVTSAPG 534
Query: 477 -KKGQEVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 515
K +V IQG I + + L+E++ +P+++I+ L+K +
Sbjct: 535 LKDSVQVQIQGNQIHHLGRLLLEEYRLPRKHIQGLEKAPK 574
>sp|Q5RA63|EIF2D_PONAB Eukaryotic translation initiation factor 2D OS=Pongo abelii
GN=EIF2D PE=2 SV=1
Length = 584
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 239/518 (46%), Gaps = 54/518 (10%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG+ +P GLP G+ A+ + GN AP+A+G MS+ E L +GL+G+ + H Y
Sbjct: 113 MLPGLVMPPAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTY 172
Query: 61 RDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDAD 120
+D LW S S P+ P L ++ +S+ S Q + ++ +
Sbjct: 173 QDHLWRSGNKSSPPSIA---------PLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGE 223
Query: 121 NANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDK 180
N E + + + + D L ++ +T +E +D L +
Sbjct: 224 EENGEVHQAREDKS------LSEAPEDTSTRGLNQDSTDSKTLQEQ-------MDELLQQ 270
Query: 181 CLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLF 240
C L AL VK DLP+ ST +H+ C P G LDIKKSS+KKL+K+LQ
Sbjct: 271 CFLHALKCRVKKADLPLLASTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQE--- 327
Query: 241 VLQLMLVFWLLIRRHLKSQISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQA 299
I VKE ES++ +V+ HP SF PE P SQ
Sbjct: 328 -----------------QIIQVKELSKGVESIV-AVDWKHPRITSFVIPEPSP---TSQT 366
Query: 300 VDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKENL 359
+ + + QP ++ +Y + +F G G SE +V NY +K +L
Sbjct: 367 IQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDL 424
Query: 360 VKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVSRGSQS 418
V K++V LDP L D + + K ++ L + + ++Q A+ V G +
Sbjct: 425 VDADNKNLVRLDPILCDCILE---KNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQEP 481
Query: 419 VVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKK 478
+V+KG + I I +R NKK+T + LE + +DP ++A+ LQ++ STTV PG K
Sbjct: 482 IVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGAK 541
Query: 479 GQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 515
+V IQG + + L+E++ +P+++I+ L+K +
Sbjct: 542 DSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALK 579
>sp|P41214|EIF2D_HUMAN Eukaryotic translation initiation factor 2D OS=Homo sapiens
GN=EIF2D PE=1 SV=3
Length = 584
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 239/518 (46%), Gaps = 54/518 (10%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG+ +P GLP G+ A+ + GN AP+A+G MS+ E L +GL+G+ + H Y
Sbjct: 113 MLPGLVMPPAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTY 172
Query: 61 RDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDAD 120
+D LW S S P+ P L ++ +S+ S Q + ++ +
Sbjct: 173 QDHLWRSGNKSSPPSIA---------PLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGE 223
Query: 121 NANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDK 180
N E + + + + D L ++ +T +E +D L +
Sbjct: 224 EENGEVHQAREDKS------LSEAPEDTSTRGLNQDSTDSKTLQEQ-------MDELLQQ 270
Query: 181 CLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLF 240
C L AL VK DLP+ ST +H+ C P G LDIKKSS+KKL+K+LQ
Sbjct: 271 CFLHALKCRVKKADLPLLTSTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQE--- 327
Query: 241 VLQLMLVFWLLIRRHLKSQISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQA 299
I VKE ES++ +V+ HP SF PE P SQ
Sbjct: 328 -----------------QIIQVKELSKGVESIV-AVDWKHPRITSFVIPEPSP---TSQT 366
Query: 300 VDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKENL 359
+ + + QP ++ +Y + +F G G SE +V NY +K +L
Sbjct: 367 IQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDL 424
Query: 360 VKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVSRGSQS 418
V K++V LDP L D + + K ++ L + + ++Q A+ V G +
Sbjct: 425 VDADNKNLVRLDPILCDCILE---KNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQEP 481
Query: 419 VVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKK 478
+V+KG + I I +R NKK+T + LE + +DP ++A+ LQ++ STTV PG K
Sbjct: 482 IVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGAK 541
Query: 479 GQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 515
+V IQG + + L+E++ +P+++I+ L+K +
Sbjct: 542 DSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALK 579
>sp|Q04600|TMA64_YEAST Translation machinery-associated protein 64 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA64 PE=1
SV=1
Length = 565
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 41/395 (10%)
Query: 124 SEPNSTSATQDDFDGNI--VEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDKC 181
S+ N+ S+ Q + I VE+ DV + +VD E E T DVD ++ +
Sbjct: 191 SKDNNISSKQIESSEQIKAVEKEQEDVKE----ASVDVEEIAEVLDHFTVSDVDYFITRA 246
Query: 182 LLQALHTTVKDKDLPMPGSTLWSNHILPCRP--SGITLDIKKSSHKKLTKWLQAKSSAGL 239
L L T K +LP+ S SNHI+ P +++KK+S KK K+L
Sbjct: 247 LYYTL-TQDKGLELPISASNFISNHIMRNLPPIDHNEVNVKKTSWKKSAKFL-------- 297
Query: 240 FVLQLMLVFWLLIRRHLKSQISVKEDKYKKESMLFSVNRGHPDYLSFKPEKRPAEKASQA 299
+H + + +K + + N + +F P K K++
Sbjct: 298 --------------KHFEKEGFLKLKGKGDDLTIVGKNTDKDELKNFVPYKLGCSKSATE 343
Query: 300 VDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKENL 359
+ + + + ++ +YKP + V + YT + V YI +NL
Sbjct: 344 SRESTTSKEKTSGMMYSLTLYKPFNLAKDLLKEVNLASHTYYTSQDIRSAVSQYISVKNL 403
Query: 360 VKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKD--LGSTFVNRMQAHHVVSRGSQ 417
K V++D L D + K KK + I + L N + + +
Sbjct: 404 ADTKDKGKVIMDDLLFDMVNK---KKKVLNASRIIARGEILHPLLTNNFTEFYQIFKSDD 460
Query: 418 SVV----RKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAE 473
+++ KG+L I+I+TE + G K +T++S E F +DPE+LA++L+K + STT++E
Sbjct: 461 TLLFKAPMKGSLPHIKIITEMKIGRKVITRVSNFEVFQVDPESLAADLRKICSGSTTISE 520
Query: 474 LPGKKGQEVLIQGGVIADVAKHLVEQFGIPKRYIE 508
K EV +QG + HL + GIP ++I+
Sbjct: 521 SQTFKCAEVQVQGPHGQSIIDHL-NKLGIPSKWID 554
>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis
(strain RS) GN=TMA22 PE=3 SV=1
Length = 200
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 421 RKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ 480
RK A K +QI R K +T ++GLE +D + +A EL KKFA ++V + P G+
Sbjct: 100 RKAAAK-VQIKRVERNKRKHVTVIAGLEAHGLDNKKVAKELGKKFATGSSVTKNPA-GGE 157
Query: 481 EVLIQGGVIADVAKHLVEQFG--IPKRYIEVLD 511
E+ +QG V DV + LVE G +P+ +E+++
Sbjct: 158 EITVQGDVCEDVLEWLVEVHGKEVPEDNLEIVE 190
>sp|Q2TVZ2|DENR_ASPOR Translation machinery-associated protein 22 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tma22 PE=3 SV=1
Length = 194
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 421 RKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ 480
RK A K +QI R K +T ++GLE + ++ + +A EL KKFA ++V +
Sbjct: 96 RKAASK-VQIKRVERNKRKHVTVIAGLEVYGLENKKVAKELGKKFATGSSVTR-SAAGNE 153
Query: 481 EVLIQGGVIADVAKHLVEQFG--IPKRYIEVLDKTARK 516
E+ +QG V DV L+E +G IP+ IE+++ +K
Sbjct: 154 EITVQGDVSDDVQDWLLEVYGKEIPEANIEIIEDKKKK 191
>sp|A1C8E3|DENR_ASPCL Translation machinery-associated protein 22 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tma22 PE=3 SV=1
Length = 194
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 421 RKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ 480
RK A K +QI R K +T ++GLE ++ + +A EL KKFA ++V + P +
Sbjct: 96 RKAAAK-VQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPA-GVE 153
Query: 481 EVLIQGGVIADVAKHLVEQFG--IPKRYIEVLDKTARK 516
E+ +QG V DV + L+E +G +P+ IE+++ +K
Sbjct: 154 EITVQGDVSEDVQEWLLEVYGKELPESNIELVEDKKKK 191
>sp|A7TES6|DENR_VANPO Translation machinery-associated protein 22 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=TMA22 PE=3
SV=1
Length = 206
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 405 RMQAHHVVSRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKK 464
R+QA +R + + +K + K + I E R K + +SGLE F +D + LA K
Sbjct: 77 RLQAKQE-NREQRELAKKLSSKVV-IKREARTKRKFIVAISGLEVFEIDMKKLAKTFASK 134
Query: 465 FACSTTVAELPGKKGQEVLIQGGVIADVAKH---LVEQFGIPKRYIEVLDKTARK 516
FA +V++ KK E++IQG V+ +V K+ L+E+ G+ +E++D +K
Sbjct: 135 FATGCSVSKNAEKK-DEIVIQGDVLEEVEKYIHSLLEEKGLKNVKLEIIDSQKKK 188
>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tma22 PE=3 SV=1
Length = 194
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 424 ALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVL 483
A +QI R K +T ++GLE ++ + +A EL KKFA ++V + P +E+
Sbjct: 98 AAAKVQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGV-EEIT 156
Query: 484 IQGGVIADVAKHLVEQFG--IPKRYIEVLDKTARK 516
+QG V DV + L+E +G IP+ IE+++ +K
Sbjct: 157 VQGDVSEDVQEWLLELYGKEIPESNIELVEDKKKK 191
>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tma22 PE=3 SV=2
Length = 194
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 424 ALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVL 483
A +QI R K +T ++GLE ++ + +A EL KKFA ++V + P +E+
Sbjct: 98 AAAKVQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGV-EEIT 156
Query: 484 IQGGVIADVAKHLVEQFG--IPKRYIEVLDKTARK 516
+QG V DV + L+E +G IP+ IE+++ +K
Sbjct: 157 VQGDVSEDVKEWLLELYGKEIPESNIELVEDKKKK 191
>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tma-22 PE=3 SV=1
Length = 187
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 335 ADTGRLYTFSEACDVVFNYIEKENLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIH 394
A TGR + C + Y E VK + + PT+ ++ + + +
Sbjct: 3 ALTGRPVVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVE 62
Query: 395 KKDLGSTFVNRMQAHHVVSRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDP 454
++ + A + Q+ R ++ TI+ + R K +T +SGLE F ++
Sbjct: 63 AQERAMKDAKKKAAKAEAAEQKQADKRANSVVTIKRI--ERNKRKYVTSVSGLEAFGLEL 120
Query: 455 EALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAKHLVEQFG-IPKRYIEVLD 511
+ +A + KKFA ++V ++P G+E+++QG V ++ + ++E++ +P+ IE+++
Sbjct: 121 KKVAKDFGKKFATGSSVTKVPS-GGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVE 177
>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3
SV=2
Length = 201
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 425 LKTIQIVTERRQGNKK--MTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEV 482
LK + +R + NK+ +T +SGLE+F ++ + +A + KKFA ++V ++ G+E+
Sbjct: 99 LKKSVVTVKRIERNKRKYVTSVSGLESFGLELKKVAKDFGKKFATGSSVTKV-ASGGEEI 157
Query: 483 LIQGGVIADVAKHLVEQF-GIPKRYIEVLDKTARK 516
++QG V ++ + +VE++ +P+ IE++D K
Sbjct: 158 VVQGDVSDEIKEFIVEKYKDVPEDNIELVDDKKNK 192
>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=TMA22 PE=3 SV=1
Length = 188
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 435 RQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAK 494
R K +T ++GLE F ++ + +A + KKFA +V ++P G+E+++QG V ++ +
Sbjct: 103 RNKRKFVTSVTGLEAFGLELKKVAKDFGKKFATGASVTKVPS-GGEEIVVQGDVSGEIEE 161
Query: 495 HLVEQF-GIPKRYIEVLDKTARK 516
L+E++ IP+ IE+++ +K
Sbjct: 162 FLLEKYKDIPEDNIELVEDKKKK 184
>sp|A6SIZ0|DENR_BOTFB Translation machinery-associated protein 22 OS=Botryotinia
fuckeliana (strain B05.10) GN=tma22 PE=3 SV=1
Length = 197
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 428 IQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGG 487
I+I R K +T++ GLE F ++ + +A E +FA ++V ++ GQE+ +QG
Sbjct: 103 IRIKRVERNKRKYVTEVQGLEAFGLELKKVAKEFGSRFATGSSVTKV-ASGGQEITVQGD 161
Query: 488 VIADVAKHLVEQF-GIPKRYIEVLDKTARK 516
V DV + L++ + IPK+ I VL++ +K
Sbjct: 162 VSDDVREFLIKNYKNIPKKNI-VLEEPKKK 190
>sp|A2QHG9|DENR_ASPNC Translation machinery-associated protein 22 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=tma22 PE=3 SV=1
Length = 197
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 424 ALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVL 483
A +QI R K +T ++GL+ + ++ + +A +L KKFA +++ G +E+
Sbjct: 98 AASKVQIKRVERNKRKHVTVITGLDIYGLENKKIAKDLGKKFATGSSMTRSAGGT-EEIT 156
Query: 484 IQGGVIADVAKHLVEQFG--IPKRYIEVLDKTARK 516
+QG V DV + L+E +G IP+ IE+++ +K
Sbjct: 157 VQGDVSDDVKEWLLEVYGKEIPEANIELIEDKKKK 191
>sp|Q6CJ30|DENR_KLULA Translation machinery-associated protein 22 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TMA22 PE=3 SV=1
Length = 200
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 413 SRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA 472
+R + + +K + K + I E R K M +SGLE F +D + L+ KFA +++
Sbjct: 81 AREERELAKKLSSKVV-IRREARTKRKCMIAISGLEVFEIDMKKLSKTFASKFATGCSIS 139
Query: 473 ELPGKKGQEVLIQGGVIADVAKH---LVEQFGIPKRYIEVLD 511
+ KK +EV++QG + +V + L+E+ G+ + +EV+D
Sbjct: 140 KNAEKK-EEVIVQGDLADEVEAYIHSLLEEKGMKEVKVEVID 180
>sp|Q6FXQ4|DENR_CANGA Translation machinery-associated protein 22 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=TMA22 PE=3 SV=1
Length = 196
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 433 ERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADV 492
E R K + +SGLE F +D + LA KFA +V++ KK +EV++QG V+ +V
Sbjct: 102 EARTKRKYIVAISGLEVFEIDMKKLAKTFASKFATGCSVSKNAEKK-EEVVVQGDVLDEV 160
Query: 493 AKH---LVEQFGIPKRYIEVLDKTARK 516
+ L+E+ G+ +E +D +K
Sbjct: 161 VAYIHSLLEEKGMKDVKVETIDTKKKK 187
>sp|P47089|DENR_YEAST Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA22 PE=1
SV=1
Length = 198
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 413 SRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA 472
+R + + +K + K I I E R K + +SGLE F +D + LA +FA +V+
Sbjct: 85 NREQRELAKKLSSKVI-IKREARTKRKFIVAISGLEVFDIDMKKLAKTFASRFATGCSVS 143
Query: 473 ELPGKKGQEVLIQGGVIADVAKH---LVEQFGIPKRYIEVLD 511
+ KK +EV+IQG V+ +V + L+E+ G+ +E +D
Sbjct: 144 KNAEKK-EEVVIQGDVMDEVETYIHSLLEEKGLKDVKVETID 184
>sp|A6ZPY2|DENR_YEAS7 Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain YJM789) GN=TMA22 PE=3 SV=1
Length = 198
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 413 SRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA 472
+R + + +K + K I I E R K + +SGLE F +D + LA +FA +V+
Sbjct: 85 NREQRELAKKLSSKVI-IKREARTKRKFIVAISGLEVFDIDMKKLAKTFASRFATGCSVS 143
Query: 473 ELPGKKGQEVLIQGGVIADVAKH---LVEQFGIPKRYIEVLD 511
+ KK +EV+IQG V+ +V + L+E+ G+ +E +D
Sbjct: 144 KNAEKK-EEVVIQGDVMDEVETYIHSLLEEKGLKDVKVETID 184
>sp|O42929|DENR_SCHPO Translation machinery-associated protein 22 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tma22 PE=3 SV=1
Length = 190
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 428 IQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGG 487
+ I T R K++T + GL+ F ++ + A L KFA +V + KK E+++QG
Sbjct: 99 VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKK-DEIVVQGD 157
Query: 488 VIADVAKHLVEQFG-IPKRYIEVLDKTARK 516
+ D+ ++E+F +P+ I++++ T K
Sbjct: 158 LNYDIFDFILEKFKEVPEDNIKIVEDTKSK 187
>sp|A5E3R9|DENR_LODEL Translation machinery-associated protein 22 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=TMA22 PE=3 SV=1
Length = 196
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 405 RMQAHHVVSRGSQSVVRKGALKTIQIVTERRQGNKK--MTKLSGLETFLMDPEALASELQ 462
+ QA H + + + ++ + +I+ +R + NK+ + +SGLE F ++P+ LA
Sbjct: 90 KKQAKHQLKQEKELTKKQNS----KIIIKRIERNKRKHIISISGLEVFQIEPKKLAKTFA 145
Query: 463 KKFACSTTVAELPGKKGQEVLIQGGVIADVAKHLVEQF 500
KFA +V + +K EV++QG V +D AK +E+
Sbjct: 146 SKFATGASVVK-NAEKLDEVVVQGDV-SDEAKEYIEKL 181
>sp|A3LSY0|DENR_PICST Translation machinery-associated protein 22 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=TMA22 PE=3 SV=1
Length = 195
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 435 RQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAK 494
R K + +SGLE F +D + LA KFA +V + KK +E+L+QG V +D AK
Sbjct: 101 RNRRKHIISISGLEVFNIDMKKLAKTFASKFATGASVTKTADKK-EEILVQGDV-SDEAK 158
Query: 495 H----LVEQFGIPKRYIEVLDKTARK 516
L+E+ G+ +E +D+ +K
Sbjct: 159 EYIEKLLEEQGLNGVEVEQVDEKKKK 184
>sp|P79060|SUI1_SCHPO Protein translation factor sui1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sui1 PE=3 SV=3
Length = 109
Score = 39.7 bits (91), Expect = 0.052, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 425 LKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLI 484
L I I ++R G K +T + GL D + + L+K FAC+ T+ + G+ + +
Sbjct: 24 LNNIHIRIQQRNGRKTLTTVQGLPREF-DQKRILRALKKDFACNGTIVK-DDDLGEVIQL 81
Query: 485 QGGVIADVAKHLVEQFGIPKRYIEV 509
QG V + L +Q G+ K+ I++
Sbjct: 82 QGDQRIKVMEFLTQQLGLQKKNIKI 106
>sp|Q8TX33|SUI1_METKA Protein translation factor SUI1 homolog OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=MK0844 PE=3 SV=1
Length = 106
Score = 39.7 bits (91), Expect = 0.065, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 420 VRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKG 479
V K ++ I+I TE+ + K +T + GL+ +D + LAS+L+++ AC T E GK
Sbjct: 22 VSKETVEKIKIYTEQVRPGKVVTIIEGLDDAGIDLQELASKLKRECACGGTAKE--GK-- 77
Query: 480 QEVLIQGGVIADVAKHLVEQFGIPKRYIEV 509
+++QG V + L+++ G + IEV
Sbjct: 78 --IILQGDHRNKVREFLIKKEGFSEDAIEV 105
>sp|P32911|SUI1_YEAST Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SUI1 PE=1
SV=1
Length = 108
Score = 39.3 bits (90), Expect = 0.074, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 428 IQIVTERRQGNKKMTKLSGL-ETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQG 486
I I ++R G K +T + G+ E + D + + L+K FAC+ + + P + G+ + +QG
Sbjct: 26 IHIRIQQRNGRKTLTTVQGVPEEY--DLKRILKVLKKDFACNGNIVKDP-EMGEIIQLQG 82
Query: 487 GVIADVAKHLVEQFGIPKRYIEV 509
A V + ++ Q G+ K+ I++
Sbjct: 83 DQRAKVCEFMISQLGLQKKNIKI 105
>sp|Q75CN1|DENR_ASHGO Translation machinery-associated protein 22 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=TMA22 PE=3 SV=1
Length = 199
Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 403 VNRMQAHHVVSRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQ 462
+ ++QA S+ + + RK + + + I E R K M ++GLE F +D + LA
Sbjct: 74 LQKLQAREE-SKEQRELARKLSSRVV-IRREARTKRKCMVVVAGLEVFEIDMKKLAKTFA 131
Query: 463 KKFACSTTVAELPGKKGQEVLIQGGVIADVAKH---LVEQFGIPKRYIEVLD 511
KFA +V++ KK +EV++QG + +V + L+E+ G+ +E +D
Sbjct: 132 SKFATGCSVSKNVEKK-EEVVVQGDIADEVEAYIHALLEEKGMKGVKVEQID 182
>sp|Q46F27|SUI1_METBF Protein translation factor SUI1 homolog OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=Mbar_A0534 PE=3 SV=1
Length = 102
Score = 37.7 bits (86), Expect = 0.19, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQ 485
+ I + RR+ K++T + G + +D L++ L+ KFAC TV KG V +Q
Sbjct: 26 QRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV------KGNTVELQ 79
Query: 486 GGVIADVAKHLVEQ 499
G +A + + L+E+
Sbjct: 80 GNHLARMKEVLMEK 93
>sp|Q8TIT3|SUI1_METAC Protein translation factor SUI1 homolog OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_4059 PE=3 SV=1
Length = 102
Score = 37.7 bits (86), Expect = 0.19, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQ 485
+ I + RR+ K++T + G + +D L++ L+ KFAC TV KG V +Q
Sbjct: 26 QRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV------KGNTVELQ 79
Query: 486 GGVIADVAKHLVEQ 499
G +A + + L+E+
Sbjct: 80 GNHLARMKEVLMEK 93
>sp|Q755R1|SUI1_ASHGO Protein translation factor SUI1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SUI1A
PE=3 SV=1
Length = 108
Score = 37.4 bits (85), Expect = 0.26, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 428 IQIVTERRQGNKKMTKLSGL-ETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQG 486
I I ++R G K +T + G+ E + D + + L+K F C+ + + + G+ + +QG
Sbjct: 26 IHIRIQQRNGRKTLTTVQGIPEEY--DLKRILKVLRKDFGCNGNMVK-DDEMGEIIQLQG 82
Query: 487 GVIADVAKHLVEQFGIPKRYIEV 509
A V + L+ Q IPK+ I++
Sbjct: 83 DQRAKVCEFLITQLAIPKKNIKI 105
>sp|Q6CA08|DENR_YARLI Translation machinery-associated protein 22 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=TMA22 PE=3 SV=1
Length = 188
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 413 SRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA 472
++ + +++K A K + I R K++ +SGLE F +D + L+ KFA +V
Sbjct: 82 AKAERELLKKLASKVV-IKRIERSKRKRIISVSGLEVFELDLKKLSKTFSSKFATGASVT 140
Query: 473 ELPGKKGQEVLIQGGV---IADVAKHLVEQFGIPKRYIEVLDKTARK 516
+ K +E++IQG V + ++ ++++ G+ + +E +D+ +K
Sbjct: 141 KTADGK-EEIVIQGDVGDGVEELITQMLKEKGLNQVKVEQIDEKKKK 186
>sp|Q9NAH4|DENR_CAEEL Density-regulated protein homolog OS=Caenorhabditis elegans
GN=Y47D3A.21 PE=3 SV=1
Length = 192
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 429 QIVTERRQ--GNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQG 486
Q VT +R+ G K +T + GL TF +D + + +KFAC ++V E++IQG
Sbjct: 108 QKVTLQREPRGKKSVTVIKGLATFDIDLKVASKLFAQKFACGSSVT-----GADEIVIQG 162
Query: 487 GVIADVAKHLVEQFGIPKRYIEVLDK 512
DV L++ IP+++ +V D+
Sbjct: 163 ----DVKDDLLDL--IPEKWKQVTDE 182
>sp|P14021|SUI1_METVA Protein translation factor SUI1 homolog OS=Methanococcus vannielii
PE=3 SV=1
Length = 102
Score = 37.0 bits (84), Expect = 0.41, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA----ELPG---KK 478
+ I++ +R+ K MT + G + L+D + LA +L+ AC TV EL G KK
Sbjct: 25 QKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGDHRKK 84
Query: 479 GQEVLIQGGVIADV 492
+E+LI+ G D+
Sbjct: 85 AEEILIKMGFSKDM 98
>sp|Q6BH22|DENR_DEBHA Translation machinery-associated protein 22 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=TMA22 PE=3 SV=1
Length = 189
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 435 RQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAK 494
R K + +SGLE F +D + LA KFA +V + KK E+++QG V +D AK
Sbjct: 101 RNKRKHVISISGLEVFNIDMKKLAKTFASKFATGASVTKNAEKKD-EIIVQGDV-SDEAK 158
Query: 495 HLVEQF 500
+E+
Sbjct: 159 DYIEKL 164
>sp|P87313|TMA20_SCHPO Translation machinery-associated protein 20 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tma20 PE=3 SV=5
Length = 181
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 1 MFPGISIPADGLPSFLSGEPWA-VKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHY 59
M PG+ LP + + + V G AP A+G T MS+ E +K +G + HY
Sbjct: 112 MIPGLVSKGGNLPDDIEKDQYVIVTAEGKEAPAAIGLTKMSAKE-MKETNKGIGIENVHY 170
Query: 60 YRDLLWGSV 68
D LW ++
Sbjct: 171 LGDNLWKTI 179
>sp|Q8PYK3|SUI1_METMA Protein translation factor SUI1 homolog OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0858 PE=3 SV=1
Length = 102
Score = 36.2 bits (82), Expect = 0.61, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQ 485
+ I + RR+ K++T + G + +D L++ L+ KFAC TV KG V +Q
Sbjct: 26 QRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV------KGNTVELQ 79
Query: 486 GGVIADVAKHLVEQ 499
G + + + L+E+
Sbjct: 80 GNHLTRMKEVLMEK 93
>sp|A0RWW9|SUI1_CENSY Protein translation factor SUI1 homolog OS=Cenarchaeum symbiosum
(strain A) GN=CENSYa_1212 PE=3 SV=1
Length = 102
Score = 35.8 bits (81), Expect = 0.80, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 428 IQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGG 487
I I E R+ KK T + GL+ L + E +A EL+ K+AC T E V +QG
Sbjct: 27 IIIRLETRRFKKKGTMIEGLDPKLNNLENVAKELKNKYACGGTAKE------GYVFLQGD 80
Query: 488 VIADVAKHLVEQFGIPKRYIEV 509
D K + G P+ IE+
Sbjct: 81 H-RDTIKDTLVGLGFPESSIEL 101
>sp|Q12UF1|SUI1_METBU Protein translation factor SUI1 homolog OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_2049 PE=3 SV=1
Length = 102
Score = 35.4 bits (80), Expect = 1.2, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQ 485
+ I + RR+ K++T + G + +D L++ L+ KFAC TV KG V +Q
Sbjct: 26 QRITVKVNRRRYGKEVTVVEGFDANEIDLHELSTYLKSKFACGGTV------KGSAVELQ 79
Query: 486 GGVIADVAKHLVEQFGIPKR 505
G ++ + LV++ P++
Sbjct: 80 GNHLSRMKAVLVKKGFSPEQ 99
>sp|Q6LXE5|SUI1_METMP Protein translation factor SUI1 homolog OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1406 PE=3 SV=1
Length = 102
Score = 34.7 bits (78), Expect = 1.8, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA----ELPG---KK 478
+ I++ +R+ K MT + G + L+D + LA +L+ AC TV EL G +K
Sbjct: 25 QKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGDHRRK 84
Query: 479 GQEVLIQGGVIADV 492
+E LI+ G D+
Sbjct: 85 AEETLIKMGFSKDM 98
>sp|A6VGZ2|SUI1_METM7 Protein translation factor SUI1 homolog OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0651
PE=3 SV=1
Length = 102
Score = 34.7 bits (78), Expect = 1.8, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA----ELPG---KK 478
+ I++ +R+ K MT + G + L+D + LA +L+ AC TV EL G +K
Sbjct: 25 QKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGDHRRK 84
Query: 479 GQEVLIQGGVIADV 492
+E LI+ G D+
Sbjct: 85 AEETLIKMGFSKDM 98
>sp|A9A9Q7|SUI1_METM6 Protein translation factor SUI1 homolog OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1267
PE=3 SV=1
Length = 102
Score = 34.7 bits (78), Expect = 1.8, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA----ELPG---KK 478
+ I++ +R+ K MT + G + L+D + LA +L+ AC TV EL G +K
Sbjct: 25 QKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGDHRRK 84
Query: 479 GQEVLIQGGVIADV 492
+E LI+ G D+
Sbjct: 85 AEETLIKMGFSKDM 98
>sp|A4FWB4|SUI1_METM5 Protein translation factor SUI1 homolog OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0172
PE=3 SV=1
Length = 102
Score = 34.7 bits (78), Expect = 1.8, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVA----ELPG---KK 478
+ I++ +R+ K MT + G + L+D + LA +L+ AC TV EL G +K
Sbjct: 25 QKIKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDSIELQGDHRRK 84
Query: 479 GQEVLIQGGVIADV 492
+E LI+ G D+
Sbjct: 85 AEETLIKMGFSKDM 98
>sp|A5DGV3|DENR_PICGU Translation machinery-associated protein 22 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TMA22 PE=3 SV=1
Length = 201
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 435 RQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAK 494
R K + +SGLE F +D + L+ KFA +V + KK E+++QG V +D A+
Sbjct: 101 RNKRKHVIAISGLEVFDIDMKKLSKTFASKFATGASVTKNAEKKD-EIIVQGDV-SDEAR 158
Query: 495 ----HLVEQFGIPKRYIEVLD 511
L+E+ G+ + +E +D
Sbjct: 159 AYIEKLLEEKGLNEVKVEQID 179
>sp|Q54WG0|DENR_DICDI Density-regulated protein homolog OS=Dictyostelium discoideum
GN=denr PE=3 SV=1
Length = 224
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 429 QIVTERRQGNKK--MTKLSGLETFLMDPEALASELQKKFACSTTVAE-LPGKKGQEVLIQ 485
QI+ E Q NK+ +TK++GLE + + A + KKF+C +V + + +++ IQ
Sbjct: 130 QIIIEVNQRNKRKHVTKITGLELYGIKLSDAAKVMAKKFSCGCSVVKSISNPNSEDIDIQ 189
Query: 486 GGVIADVAKHLVEQF 500
G ++ + E++
Sbjct: 190 GDFGEELVDLIEEKY 204
>sp|Q9HME3|SUI1_HALSA Protein translation factor SUI1 homolog OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_2584C
PE=3 SV=1
Length = 97
Score = 34.3 bits (77), Expect = 2.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAE 473
+ I+I + R+ K++T + G + +D ++L+S+L+ KFAC TV +
Sbjct: 25 QQIEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGTVED 72
>sp|B0R868|SUI1_HALS3 Protein translation factor SUI1 homolog OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=OE_4626R PE=3 SV=1
Length = 97
Score = 34.3 bits (77), Expect = 2.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 426 KTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAE 473
+ I+I + R+ K++T + G + +D ++L+S+L+ KFAC TV +
Sbjct: 25 QQIEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGTVED 72
>sp|A9A389|SUI1_NITMS Protein translation factor SUI1 homolog OS=Nitrosopumilus maritimus
(strain SCM1) GN=Nmar_0622 PE=3 SV=1
Length = 102
Score = 34.3 bits (77), Expect = 2.2, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 428 IQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAE 473
I I E R+ KK T + GL+ L + E +A EL+ K+AC T E
Sbjct: 27 IIIRLETRRFKKKGTMIEGLDPKLNNLETVAKELKSKYACGGTAKE 72
>sp|Q3IU96|SUI1_NATPD Protein translation factor SUI1 homolog OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=NP_0388A PE=3 SV=1
Length = 97
Score = 33.9 bits (76), Expect = 2.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 431 VTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAE 473
+ ERR G K++T + G + +D ++L+S+L+ KFAC TV +
Sbjct: 31 IDERRYG-KEVTVIEGFDPQDVDLDSLSSDLKSKFACGGTVED 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,724,678
Number of Sequences: 539616
Number of extensions: 8184773
Number of successful extensions: 18293
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 18213
Number of HSP's gapped (non-prelim): 122
length of query: 516
length of database: 191,569,459
effective HSP length: 122
effective length of query: 394
effective length of database: 125,736,307
effective search space: 49540104958
effective search space used: 49540104958
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)