BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010172
(516 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 202/476 (42%), Gaps = 26/476 (5%)
Query: 33 SRKVNLPPGPKPWPFIGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXX 92
S+ + PPGP WP IG++ +G PH+++ +SQ+YG ++ ++
Sbjct: 7 SKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIR 66
Query: 93 XXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMELL--------GT 144
F RP L + S + GP W R++ L +
Sbjct: 67 QALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPAS 126
Query: 145 KRLDQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS--ICRMVLGKRYTDKAEK 202
E +E + L + ++ H + Y + + IC + G+RY ++
Sbjct: 127 STSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQE 186
Query: 203 NTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDE 262
E + G + D IP L + KD+++K F + ++ E
Sbjct: 187 LLSLVNLNNNFGEVV----GSGNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKMVKE 241
Query: 263 HYARRKSIKDYGVHDMVDVLLHLADDPSLE----VKLEREHIKALIQDLLTAGTDTSAIN 318
HY K+ + + D+ D L+ + L+ V+L E I ++ DL AG DT
Sbjct: 242 HY---KTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTA 298
Query: 319 VEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLL 378
+ W++ L+ +P +K EELD IGR R D LPY++A + ET R P
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFT 358
Query: 379 APRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDV-KGHDF 437
P D + G+ I K V VN W I D +W P+EF PERF+ + + K
Sbjct: 359 IPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSE 418
Query: 438 QLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTM 493
+++ FG G+R CIG + V LA LL E+ +P +K ++M +GLTM
Sbjct: 419 KVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGLTM 471
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 201/471 (42%), Gaps = 29/471 (6%)
Query: 39 PPGPKPWPFIGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXKTH 98
PP P WP +G++ +G PH+++ +SQ+YG ++ ++
Sbjct: 18 PPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQ 77
Query: 99 DISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMELLGTKRLDQ--------- 149
F RP L T S + GP W AR+ L T +
Sbjct: 78 GDDFKGRPDLYTSTLITDGQSLTFSTDSGPVW-AARRRLAQNALNTFSIASDPASSSSCY 136
Query: 150 FEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS--ICRMVLGKRYTDKAEKNTVTP 207
E +E A + L + ++ H + + + I M G+ + + +++
Sbjct: 137 LEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLV 196
Query: 208 KDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARR 267
K+ E +E N LD + +L + LQ R K +++ F + + EHY
Sbjct: 197 KNTHEFVETASSGNP-LDFFPILRYLPNPALQ----RFKAFNQRFLWFLQKTVQEHY--- 248
Query: 268 KSIKDYGVHDMVDVLL-HLADDPSLEVKL-EREHIKALIQDLLTAGTDTSAINVEWAMSE 325
+ V D+ L H P L +E I L+ D+ AG DT + W++
Sbjct: 249 QDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMY 308
Query: 326 LLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVARE 385
L+ PE +K +ELD IGR+R D LPYL+A + ET R P P
Sbjct: 309 LVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTR 368
Query: 386 DCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFI---GKEIDVKGHDFQLLPF 442
D + G+ I K V VN W + DP +WE P+EFRPERF+ G I+ K +++ F
Sbjct: 369 DTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAIN-KPLSEKMMLF 427
Query: 443 GSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTM 493
G G+R CIG L + LA LL E+ +P +K +++ +GLTM
Sbjct: 428 GMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTM 475
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 202/478 (42%), Gaps = 34/478 (7%)
Query: 39 PPGPKPWPFIGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXKTH 98
PPGP WP IGN +G H+S L+++YG + ++
Sbjct: 11 PPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQ 70
Query: 99 DISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKIC--LMELLGTKRLDQFEYMR-- 154
+FA RP+ + + + S MA Y +W+ R+ +M T++ + +
Sbjct: 71 GSAFADRPSFASFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGH 129
Query: 155 -VEERNAFLFELFKSVSTYVHLKDHLYTLNHTS--ICRMVLGKRYTDKAEKNTVTPKDFT 211
+ E + L + + L T+ + + + G RY+ +F
Sbjct: 130 VLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHD-------DPEFR 182
Query: 212 EML---EELFLLNGILDIGDSIPWLASFD--LQGHVKRMKDVSKKLDKFYEDILDEHYAR 266
E+L EE G + D +PWL F ++ + + +++ F ILD+
Sbjct: 183 ELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNF---ILDKFLRH 239
Query: 267 RKSIKDYGV-HDMVDVLLHLA------DDPSLEVKLEREHIKALIQDLLTAGTDTSAINV 319
+S++ DM+D + A D +L+ E++ A I D+ A DT + +
Sbjct: 240 CESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTAL 299
Query: 320 EWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLA 379
+W + + P+ + ELD+ +GRDR D +LPY+ A + E MR P+
Sbjct: 300 QWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI 359
Query: 380 PRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKE-IDVKGHDFQ 438
P + V GY I K+T V VN W++ DP W P F P RF+ K+ + K +
Sbjct: 360 PHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSR 419
Query: 439 LLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMSRK 496
++ F G+R CIG L + ++ L H +++ NE M +GLT+ K
Sbjct: 420 VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRA---NPNEPAKMNFSYGLTIKPK 474
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 198/454 (43%), Gaps = 42/454 (9%)
Query: 50 NLNLIGPLP--------HVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXKTHDIS 101
+L L+G LP H + L +KYGP+ ++
Sbjct: 15 SLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKD 74
Query: 102 FASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMELLGTKRLDQ-FEYMRVEERNA 160
F+ RP + + N G+A A G +W+ R++ + K DQ E + +E +
Sbjct: 75 FSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEIST 134
Query: 161 FLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTD-KAEKNTVTPKDFTEMLEELFL 219
L + + ++ I + Y + E N + +++ E + +
Sbjct: 135 LCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVI--QNYNEGIIDNLS 192
Query: 220 LNGILDIGDSIPWLASF------DLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDY 273
+ ++D+ +PWL F L+ HVK D+ K+ + Y ++ +
Sbjct: 193 KDSLVDL---VPWLKIFPNKTLEKLKSHVKIRNDLLNKILENY----------KEKFRSD 239
Query: 274 GVHDMVDVLL---------HLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMS 324
+ +M+D L+ + D E+ L HI I D+ AG +T+ V+W ++
Sbjct: 240 SITNMLDTLMQAKMNSDNGNAGPDQDSEL-LSDNHILTTIGDIFGAGVETTTSVVKWTLA 298
Query: 325 ELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAR 384
LL +P+ +K EE+D+ +G R D L L+A ++E +RL PVAP+L P A
Sbjct: 299 FLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKAN 358
Query: 385 EDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIG-KEIDVKGHDFQLLPFG 443
D + + + K T V++N+WA+ + W +P++F PERF+ + LPFG
Sbjct: 359 VDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFG 418
Query: 444 SGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGD 477
+G R CIG L + + +A LL F+ ++P D
Sbjct: 419 AGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 452
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 186/444 (41%), Gaps = 28/444 (6%)
Query: 34 RKVNLPPGPKPWPFIGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXX 93
R ++LPP G L+L+ P + + SL+QK GP+ L+
Sbjct: 26 RNLHLPPL-----VPGFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEE 80
Query: 94 XXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMELL-GTKRLDQFEY 152
+ FA RP + + K + ++ Y W+ +K+ LL GT+ E
Sbjct: 81 AMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR--SSMEP 138
Query: 153 MRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTE 212
+ F + V ++ L + IC + G + +D +
Sbjct: 139 WVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMK 198
Query: 213 MLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKD 272
+ + + I D +P+L F G + R+K + D E L H ++S+
Sbjct: 199 TWD-----HWSIQILDMVPFLRFFPNPG-LWRLKQAIENRDHMVEKQLRRH---KESMVA 249
Query: 273 YGVHDMVDVLLHLADDPSLEV---KLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKS 329
DM D +L +E +L H+ + DL GT+T+A + WA++ LL
Sbjct: 250 GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHH 309
Query: 330 PETIQKATEELDRAIG---RDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVARED 386
PE ++ EELDR +G V KD LP L A + E +RL PV PL P
Sbjct: 310 PEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRP 369
Query: 387 CKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGR 446
+ GYDI + V+ N+ D T+WE+P+EFRP+RF+ G + L FG G
Sbjct: 370 SSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGA 424
Query: 447 RMCIGYGLGLKVVQSTLANLLHGF 470
R+C+G L + LA LL F
Sbjct: 425 RVCLGESLARLELFVVLARLLQAF 448
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 191/459 (41%), Gaps = 27/459 (5%)
Query: 33 SRKVNLPPGPKPWPFIGNLNLIGPLPHV-SIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P P IGN+ I S + S+ YGP+ + F
Sbjct: 6 SSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMEL----LGTKRL 147
+ F+ R + T +++ G W++ R+ L L +G + +
Sbjct: 66 KEALIDNGEEFSGRGNSPISQRITKGLGIISSN--GKRWKEIRRFSLTTLRNFGMGKRSI 123
Query: 148 DQFEYMRV-EERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVT 206
+ RV EE + + EL K+ ++ L IC +V KR+ K +
Sbjct: 124 ED----RVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTL 179
Query: 207 PKDFTEMLEELFLLNGI-LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYA 265
K F E +LN + + ++ P L H K +K+V+ E + EH A
Sbjct: 180 MKRFNENFR---ILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKV-KEHQA 235
Query: 266 RRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEW 321
S+ D +D L D+ E +E ++ + DL AGT+T++ + +
Sbjct: 236 ---SLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIE--NLVGTVADLFVAGTETTSTTLRY 290
Query: 322 AMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
+ LLK PE K EE+D IGR R +D +PY A+V E R + P P
Sbjct: 291 GLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPH 350
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
D K Y I K T +M + ++ D + PN F P F+ K + K D+ +P
Sbjct: 351 AVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMP 409
Query: 442 FGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKN 480
F +G+R+C G GL + L +L F K D+KN
Sbjct: 410 FSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKN 448
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 204/488 (41%), Gaps = 40/488 (8%)
Query: 33 SRKVNLPPGPKPWPFIGNLNLIGPLPHV--SIHSLSQKYGPLMHLKFXXXXXXXXXXXXX 90
S K LPPGP P P IGNL + L ++ S L+Q++GP+ L
Sbjct: 6 SSKGKLPPGPFPLPIIGNLFQLE-LKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKA 64
Query: 91 XXXXXKTHDISFASR---PALLAGKYTTYNYSGMATAPYGPYWRQARKICLMELLGTKRL 147
+ F+ R PA A + ++ GP W+ R+ L L
Sbjct: 65 VKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNN------GPTWKDIRRFSLTTLRNYGMG 118
Query: 148 DQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTP 207
Q R++ FL E + L ++ +L +++ D ++
Sbjct: 119 KQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDE----- 173
Query: 208 KDFTEMLEELFLLNGILDIGDSIPWLASFD--------LQG-HVKRMKDVSKKLDKFYED 258
+ L ++L N + S PWL ++ L G H K +K+V++ + E
Sbjct: 174 ----KFLRLMYLFNENFHLL-STPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSER 228
Query: 259 ILDEHYARRKSIKDYGVHDMVDVLL--HLADDPSLEVKLEREHIKALIQDLLTAGTDTSA 316
+ + H +S+ D+ D LL + S E + I + DL AGT+T++
Sbjct: 229 VKEHH----QSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTS 284
Query: 317 INVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAP 376
+ + + L+K PE +K EE+DR IG R KD +PY+ A+V E R + P
Sbjct: 285 TTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVP 344
Query: 377 LLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHD 436
P A D GY I K T V+ + ++ D + P +F+PE F+ + K D
Sbjct: 345 SNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSD 404
Query: 437 FQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLN-MEDRFGLTMSR 495
+ PF +G+R+C G GL + L +L F K D K+ DL+ + FG R
Sbjct: 405 Y-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPR 463
Query: 496 KVPLVVVP 503
L V+P
Sbjct: 464 -YKLCVIP 470
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 204/465 (43%), Gaps = 35/465 (7%)
Query: 33 SRKVNLPPGPKPWPFIGNLNLIGPLPHVS--IHSLSQKYGPLMHLKFXXXXXXXXXXXXX 90
S + LPPGP P P IGN+ I + VS + +LS+ YGP+ L F
Sbjct: 7 SGRGKLPPGPTPLPVIGNILQID-IKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEV 65
Query: 91 XXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMEL----LGTKR 146
F+ R + + + + G W++ R+ LM L +G +
Sbjct: 66 VKEALIDLGEEFSGRGHFPLAERANRGFGIVFSN--GKRWKEIRRFSLMTLRNFGMGKRS 123
Query: 147 LDQFEYMRV-EERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTV 205
++ RV EE + EL K+ ++ L IC ++ KR+ K ++
Sbjct: 124 IED----RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQ--- 176
Query: 206 TPKDFTEMLEEL-----FLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYE-DI 259
F ++E+L + + I ++ P + + H K +K+++ F E DI
Sbjct: 177 ----FLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLA-----FMESDI 227
Query: 260 LDEHYARRKSIKDYGVHDMVDVLL--HLADDPSLEVKLEREHIKALIQDLLTAGTDTSAI 317
L++ ++S+ D +D L + + + + E++ DLL AGT+T++
Sbjct: 228 LEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTST 287
Query: 318 NVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPL 377
+ +A+ LLK PE K EE++R +GR+R +D +PY A+V E R + P
Sbjct: 288 TLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPT 347
Query: 378 LAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDF 437
P D K Y I K T ++ ++ ++ D + P F P F+ + + K ++
Sbjct: 348 SLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY 407
Query: 438 QLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNED 482
+PF +G+R+C+G GL + L +L F K D K+ D
Sbjct: 408 -FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSLIDPKDLD 451
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 199/456 (43%), Gaps = 29/456 (6%)
Query: 39 PPGPKPWPFIGNLNLIGPLPHVS--IHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXK 96
PPGP P P IGN+ IG + +S + +LS+ YGP+ L F
Sbjct: 11 PPGPTPLPVIGNILQIG-IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 69
Query: 97 THDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMEL----LGTKRLDQFEY 152
F+ R + + + + G W++ R+ LM L +G + ++
Sbjct: 70 DLGEEFSGRGIFPLAERANRGFGIVFSN--GKKWKEIRRFSLMTLRNFGMGKRSIED--- 124
Query: 153 MRV-EERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFT 211
RV EE + EL K+ ++ L IC ++ KR+ K ++ +
Sbjct: 125 -RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLN 183
Query: 212 EMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIK 271
E +E L + + + ++ P L + H K +K+V+ K Y IL++ ++S+
Sbjct: 184 ENIE--ILSSPWIQVYNNFPALLDYFPGTHNKLLKNVA--FMKSY--ILEKVKEHQESMD 237
Query: 272 DYGVHDMVDVLL-----HLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSEL 326
D +D L + PS + E ++ DL AGT+T++ + +A+ L
Sbjct: 238 MNNPQDFIDCFLMKMEKEKHNQPS---EFTIESLENTAVDLFGAGTETTSTTLRYALLLL 294
Query: 327 LKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVARED 386
LK PE K EE++R IGR+R +D +PY A+V E R + P P D
Sbjct: 295 LKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD 354
Query: 387 CKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGR 446
K Y I K T +++++ ++ D + P F P F+ + + K + +PF +G+
Sbjct: 355 IKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGK 413
Query: 447 RMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNED 482
R+C+G L + L ++L F K D KN D
Sbjct: 414 RICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLD 449
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 203/467 (43%), Gaps = 39/467 (8%)
Query: 33 SRKVNLPPGPKPWPFIGNLNLIGPLPHVS--IHSLSQKYGPLMHLKFXXXXXXXXXXXXX 90
S + LPPGP P P IGN+ IG + +S + +LS+ YGP+ L F
Sbjct: 7 SGRGKLPPGPTPLPVIGNILQIG-IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEA 65
Query: 91 XXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICLMEL----LGTKR 146
F+ R + + + + G W++ R+ LM L +G +
Sbjct: 66 VKEALIDLGEEFSGRGIFPLAERANRGFGIVFSN--GKKWKEIRRFSLMTLRNFGMGKRS 123
Query: 147 LDQFEYMRV-EERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTV 205
++ RV EE + EL K+ ++ L IC ++ KR+ K ++
Sbjct: 124 IED----RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQ--- 176
Query: 206 TPKDFTEMLEEL-----FLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDIL 260
F ++E+L L + + I ++ + + H K +K+V+ K Y IL
Sbjct: 177 ----FLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVA--FMKSY--IL 228
Query: 261 DEHYARRKSIKDYGVHDMVDVLL-----HLADDPSLEVKLEREHIKALIQDLLTAGTDTS 315
++ ++S+ D +D L + PS + E ++ DL AGT+T+
Sbjct: 229 EKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS---EFTIESLENTAVDLFGAGTETT 285
Query: 316 AINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVA 375
+ + +A+ LLK PE K EE++R IGR+R +D +PY A+V E R +
Sbjct: 286 STTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLL 345
Query: 376 PLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGH 435
P P D K Y I K T +++++ ++ D + P F P F+ + + K
Sbjct: 346 PTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKS 405
Query: 436 DFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNED 482
+ +PF +G+R+C+G L + L ++L F K D KN D
Sbjct: 406 KY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLD 451
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 205/488 (42%), Gaps = 39/488 (7%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P PFIGN L L + S+ +S++YGP+ +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYN--YSGMATA-PYGPYWRQARKICLMELLGTKRLD 148
F+ R G+ T++ + G A G +Q R+ + L G
Sbjct: 66 KEALVDQAEEFSGR-----GEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGK 120
Query: 149 QFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS---ICRMVLGKRYTDKAEKNTV 205
+ R++E FL + + T+ D + L+ T I +V G R+
Sbjct: 121 RGIEERIQEEAGFLIDALRG--THGANIDPTFFLSRTVSNVISSIVFGDRFD-------Y 171
Query: 206 TPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKR-----MKDVSKKLDKFYEDIL 260
K+F +L +L S L +++ V + + K+L + I
Sbjct: 172 EDKEFLSLLR--MMLGSFQFTATSTGQL--YEMFSSVMKHLPGPQQQAFKELQGLEDFIA 227
Query: 261 DEHYARRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTAGTDTSA 316
+ ++++ D +D L +P+ E L+ + L +L AGT+T +
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL--NLFFAGTETVS 285
Query: 317 INVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAP 376
+ + L+K PE K EE+DR IG++R + +D +PY +A++ E R + P
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLP 345
Query: 377 L-LAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGH 435
+ LA RV + D K + + K T V + ++ RDP + P +F P+ F+ K+ K
Sbjct: 346 MGLAHRVNK-DTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKS 404
Query: 436 DFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMSR 495
D +PF G+R C G GL + ++ F +K P K+ D++ + T+ R
Sbjct: 405 D-AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFATIPR 463
Query: 496 KVPLVVVP 503
+ +P
Sbjct: 464 NYTMSFLP 471
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 203/489 (41%), Gaps = 41/489 (8%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P PFIGN L L + S+ +S++YGP+ +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYN--YSGMATA-PYGPYWRQARKICLMEL----LGT 144
F+ R G+ T++ + G G +Q R+ + L +G
Sbjct: 66 REALVDQAEEFSGR-----GEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK 120
Query: 145 KRLDQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS---ICRMVLGKRYTDKAE 201
+ +++ R++E FL + + D + L+ T I +V G R+ K
Sbjct: 121 RGIEE----RIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD- 173
Query: 202 KNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILD 261
K+F +L + + + + H+ + + +L + ED +
Sbjct: 174 ------KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 262 ---EHYARRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTAGTDT 314
EH R ++ D +D L +P+ E L+ + L +L GT+T
Sbjct: 228 KKVEHNQR--TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL--NLFIGGTET 283
Query: 315 SAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPV 374
+ + + L+K PE K EE+DR IG++R + +D +PY++A++ E R V
Sbjct: 284 VSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDV 343
Query: 375 APLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKG 434
P+ R ++D K + + K T V + ++ RDP+ + P +F P+ F+ ++ K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 435 HDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMS 494
D +PF G+R C G GL + ++ F K K+ D++ + T+
Sbjct: 404 SD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 495 RKVPLVVVP 503
R + +P
Sbjct: 463 RNYTMSFLP 471
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 201/466 (43%), Gaps = 36/466 (7%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P+P IGN L + S+ S+ YGP+ +
Sbjct: 6 SSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYNYSGMATA-PYGPYWRQARKICLMEL----LGTKR 146
FA R ++ + + G+ A W++ R+ LM L +G +
Sbjct: 66 KEALVDLGEEFAGRGSVPILEKVS---KGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRS 122
Query: 147 LDQFEYMRV-EERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTV 205
++ R+ EE + EL K+ ++ L IC ++ R+ K E
Sbjct: 123 IED----RIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDE---- 174
Query: 206 TPKDFTEMLEEL-----FLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDIL 260
+F +++E L L L + ++ P L + H K + K D I+
Sbjct: 175 ---EFLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIH----KTLLKNADYIKNFIM 227
Query: 261 DEHYARRKSIKDYGVHDMVDV-LLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINV 319
++ +K + D +D L+ + + +LE LE I + DL AGT+T++ +
Sbjct: 228 EKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIA--VSDLFGAGTETTSTTL 285
Query: 320 EWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLA 379
+++ LLK PE + EE++R IGR R +D +PY A++ E R + P
Sbjct: 286 RYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNL 345
Query: 380 PRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQL 439
P D + Y I K T ++ ++ ++ D + P F P F+ + + K D+
Sbjct: 346 PHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-F 404
Query: 440 LPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNM 485
+PF +G+RMC+G GL + L ++L F KL ++ +DL++
Sbjct: 405 MPFSAGKRMCVGEGLARMELFLFLTSILQNF--KLQSLVEPKDLDI 448
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 202/489 (41%), Gaps = 41/489 (8%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P PFIGN L L + S+ +S++YGP+ +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYN--YSGMATA-PYGPYWRQARKICLMEL----LGT 144
F+ R G+ T++ + G G +Q R+ + L +G
Sbjct: 66 REALVDQAEEFSGR-----GEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK 120
Query: 145 KRLDQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS---ICRMVLGKRYTDKAE 201
+ +++ R++E FL + + D + L+ T I +V G R+ K
Sbjct: 121 RGIEE----RIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD- 173
Query: 202 KNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILD 261
K+F +L + + + + H+ + + +L + ED +
Sbjct: 174 ------KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 262 ---EHYARRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTAGTDT 314
EH R ++ D +D L +P+ E L+ + L L GT+T
Sbjct: 228 KKVEHNQR--TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL--QLFVGGTET 283
Query: 315 SAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPV 374
+ + + L+K PE K EE+DR IG++R + +D +PY++A++ E R V
Sbjct: 284 VSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDV 343
Query: 375 APLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKG 434
P+ R ++D K + + K T V + ++ RDP+ + P +F P+ F+ ++ K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 435 HDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMS 494
D +PF G+R C G GL + ++ F K K+ D++ + T+
Sbjct: 404 SD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 495 RKVPLVVVP 503
R + +P
Sbjct: 463 RNYTMSFLP 471
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 202/489 (41%), Gaps = 41/489 (8%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P PFIGN L L + S+ +S++YGP+ +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYN--YSGMATA-PYGPYWRQARKICLMEL----LGT 144
F+ R G+ T++ + G G +Q R+ + L +G
Sbjct: 66 REALVDQAEEFSGR-----GEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK 120
Query: 145 KRLDQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS---ICRMVLGKRYTDKAE 201
+ +++ R++E FL + + D + L+ T I +V G R+ K
Sbjct: 121 RGIEE----RIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD- 173
Query: 202 KNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILD 261
K+F +L + + + + H+ + + +L + ED +
Sbjct: 174 ------KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 262 ---EHYARRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTAGTDT 314
EH R ++ D +D L +P+ E L+ + L L GT+T
Sbjct: 228 KKVEHNQR--TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL--QLFIGGTET 283
Query: 315 SAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPV 374
+ + + L+K PE K EE+DR IG++R + +D +PY++A++ E R V
Sbjct: 284 VSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDV 343
Query: 375 APLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKG 434
P+ R ++D K + + K T V + ++ RDP+ + P +F P+ F+ ++ K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 435 HDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMS 494
D +PF G+R C G GL + ++ F K K+ D++ + T+
Sbjct: 404 SD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 495 RKVPLVVVP 503
R + +P
Sbjct: 463 RNYTMSFLP 471
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 203/489 (41%), Gaps = 41/489 (8%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P PFIGN L L + S+ +S++YGP+ +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYN--YSGMATA-PYGPYWRQARKICLMEL----LGT 144
F+ R G+ T++ + G G +Q R+ + L +G
Sbjct: 66 REALVDQAEEFSGR-----GEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK 120
Query: 145 KRLDQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS---ICRMVLGKRYTDKAE 201
+ +++ R++E FL + + D + L+ T I +V G R+ K
Sbjct: 121 RGIEE----RIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD- 173
Query: 202 KNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILD 261
K+F +L + + + H+ + + +L + ED +
Sbjct: 174 ------KEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 262 ---EHYARRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTAGTDT 314
EH R ++ D +D L +P+ E L+ + L +L AGT+T
Sbjct: 228 KKVEHNQR--TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL--NLFFAGTET 283
Query: 315 SAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPV 374
+ + + L+K PE K EE+DR IG++R + +D +PY++A++ E R V
Sbjct: 284 VSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDV 343
Query: 375 APLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKG 434
P+ R ++D K + + K T V + ++ RDP+ + P +F P+ F+ ++ K
Sbjct: 344 IPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 435 HDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMS 494
D +PF G+R C G GL + ++ F K K+ D++ + T+
Sbjct: 404 SD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 495 RKVPLVVVP 503
R + +P
Sbjct: 463 RNYTMSFLP 471
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 34/395 (8%)
Query: 97 THDISFASRPALLAGKYTTYN--YSGMATAPYGPYWRQARKICLMEL----LGTKRLDQF 150
TH A RP + + + G+ A YGP WR+ R+ + L LG K L+Q+
Sbjct: 71 THGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQW 130
Query: 151 EYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS-ICRMVLGKRYTDKAEKNTVTPKD 209
V E A L F + S + L ++ I + G+R+ + + + D
Sbjct: 131 ----VTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRF-EYDDPRFLRLLD 185
Query: 210 FTE--MLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARR 267
+ + EE L +L+ ++P L H+ + + K + LDE
Sbjct: 186 LAQEGLKEESGFLREVLN---AVPVLL------HIPALAGKVLRFQKAFLTQLDELLTEH 236
Query: 268 KSIKDYGV--HDMVDVLLHLADDP--SLEVKLEREHIKALIQDLLTAGTDTSAINVEWAM 323
+ D D+ + L + + E E+++ ++ DL +AG T++ + W +
Sbjct: 237 RMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGL 296
Query: 324 SELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVA 383
++ P+ ++ +E+D IG+ R E D +PY A++ E R + PL +
Sbjct: 297 LLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMT 356
Query: 384 REDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQ---LL 440
D +V G+ I K T ++ N+ ++ +D +WEKP F PE F +D +GH + L
Sbjct: 357 SRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFL 412
Query: 441 PFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLP 475
PF +GRR C+G L + +LL F + +P
Sbjct: 413 PFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 204/493 (41%), Gaps = 49/493 (9%)
Query: 33 SRKVNLPPGPKPWPFIGN-LNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXX 91
S K LPPGP P PFIGN L L + S+ +S++YGP+ +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 92 XXXXKTHDISFASRPALLAGKYTTYN--YSGMATA-PYGPYWRQARKICLMEL----LGT 144
F+ R G+ T++ + G G +Q R+ + L +G
Sbjct: 66 REALVDQAEEFSGR-----GEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK 120
Query: 145 KRLDQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS---ICRMVLGKRYTDKAE 201
+ +++ R++E FL + + D + L+ T I +V G R+ K +
Sbjct: 121 RGIEE----RIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKDK 174
Query: 202 KNTVTPKDFTEMLEELFLLNGILDI-----GDSIPWLASF--DLQGHVKRMKDVSKKLDK 254
E L L ++ GI G +S L G ++ + L+
Sbjct: 175 ----------EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLED 224
Query: 255 FYEDILDEHYARRKSIKDYGVHDMVDVLL----HLADDPSLEVKLEREHIKALIQDLLTA 310
F ++ + ++++ D +D L +P+ E L+ + L L
Sbjct: 225 FIAKKVEHN---QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL--QLFIG 279
Query: 311 GTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMR 370
GT+T + + + L+K PE K EE+DR IG++R + +D +PY++A++ E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 371 LHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEI 430
V P+ R ++D K + + K T V + ++ RDP+ + P +F P+ F+ ++
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 431 DVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFG 490
K D +PF G+R C G GL + ++ F K K+ D++ +
Sbjct: 400 QFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGF 458
Query: 491 LTMSRKVPLVVVP 503
T+ R + +P
Sbjct: 459 ATIPRNYTMSFLP 471
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 177/401 (44%), Gaps = 46/401 (11%)
Query: 97 THDISFASRPALLAGKYTTYN--YSGMATAPYGPYWRQARKICLMEL----LGTKRLDQF 150
TH A RP + + + G+ A YGP WR+ R+ + L LG K L+Q+
Sbjct: 71 THGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQW 130
Query: 151 EYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTS-ICRMVLGKRYT----------DK 199
V E A L F + S + L ++ I + G+R+ D
Sbjct: 131 ----VTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDL 186
Query: 200 AEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDI 259
A++ K+ + L E+ LN + + IP LA G V R + K +++
Sbjct: 187 AQEGL---KEESGFLREV--LNAV-PVDRHIPALA-----GKVLRFQ---KAFLTQLDEL 232
Query: 260 LDEHYARRKSIKDYGVHDMVDVLLHLADDP--SLEVKLEREHIKALIQDLLTAGTDTSAI 317
L EH R D+ + L + + E E+++ ++ DL +AG T++
Sbjct: 233 LTEH--RMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTST 290
Query: 318 NVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPL 377
+ W + ++ P+ ++ +E+D IG+ R E D +PY A++ E R + PL
Sbjct: 291 TLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPL 350
Query: 378 LAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDF 437
+ D +V G+ I K T ++ N+ ++ +D +WEKP F PE F +D +GH
Sbjct: 351 GMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFV 406
Query: 438 Q---LLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLP 475
+ LPF +GRR C+G L + +LL F + +P
Sbjct: 407 KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 184/462 (39%), Gaps = 38/462 (8%)
Query: 48 IGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXKTHDISFASRPA 107
I +L LPHV + SQ YG + L FA RP
Sbjct: 26 IYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPC 85
Query: 108 L-LAGKYTTYNYSGMATAPYGPYWRQARKICLMEL----LGTKRLDQFEYMRVEERNAFL 162
L L K T G+ + YG W R++ + G K + ++ E F
Sbjct: 86 LPLFMKMT--KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFES----KILEETKFF 139
Query: 163 FELFKSVSTYVHLKDHLYTLNHTSICRMVL-GKRYTDKAEKNTVTPKDFTEMLEELFLLN 221
+ ++ L T ++I +++ G+R+T DF M+E LF N
Sbjct: 140 NDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFT-------YEDTDFQHMIE-LFSEN 191
Query: 222 GILDIGDSI------PWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGV 275
L S+ PW+ H + ++ + D I R+ + + V
Sbjct: 192 VELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFV 251
Query: 276 HDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQK 335
+D + +DPS +E++ + +L+ AGT+T+ + WA+ + P +
Sbjct: 252 DAYLDEMDQGKNDPS--STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQ 309
Query: 336 ATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDIL 395
+E+D +G + D +PY +A++ E +R + PL ED V GY I
Sbjct: 310 VQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
Query: 396 KNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQ---LLPFGSGRRMCIGY 452
K T V+ N++++ D W P F PERF +D G+ + L+PF GRR C+G
Sbjct: 370 KGTTVITNLYSVHFDEKYWRDPEVFHPERF----LDSSGYFAKKEALVPFSLGRRHCLGE 425
Query: 453 GLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMS 494
L + LL F P ++ + ++ R G+T+
Sbjct: 426 HLARMEMFLFFTALLQRFHLHFPHELVPD---LKPRLGMTLQ 464
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 184/462 (39%), Gaps = 38/462 (8%)
Query: 48 IGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXKTHDISFASRPA 107
I +L LPHV + SQ YG + L FA RP
Sbjct: 26 IYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPC 85
Query: 108 L-LAGKYTTYNYSGMATAPYGPYWRQARKICLMEL----LGTKRLDQFEYMRVEERNAFL 162
L L K T G+ + YG W R++ + G K + ++ E F
Sbjct: 86 LPLFMKMT--KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFES----KILEETKFF 139
Query: 163 FELFKSVSTYVHLKDHLYTLNHTSICRMVL-GKRYTDKAEKNTVTPKDFTEMLEELFLLN 221
+ ++ L T ++I +++ G+R+T DF M+E LF N
Sbjct: 140 NDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFT-------YEDTDFQHMIE-LFSEN 191
Query: 222 GILDIGDSI------PWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGV 275
L S+ PW+ H + ++ + D I R+ + + V
Sbjct: 192 VELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFV 251
Query: 276 HDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQK 335
+D + +DPS +E++ + +L+ AGT+T+ + WA+ + P +
Sbjct: 252 DAYLDEMDQGKNDPS--STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQ 309
Query: 336 ATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDIL 395
+E+D +G + D +PY +A++ E +R + PL ED V GY I
Sbjct: 310 VQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
Query: 396 KNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQ---LLPFGSGRRMCIGY 452
K T V+ N++++ D W P F PERF +D G+ + L+PF GRR C+G
Sbjct: 370 KGTTVITNLYSVHFDEKYWRDPEVFHPERF----LDSSGYFAKKEALVPFSLGRRHCLGE 425
Query: 453 GLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGLTMS 494
L + LL F P ++ + ++ R G+T+
Sbjct: 426 HLARMEMFLFFTALLQRFHLHFPHELVPD---LKPRLGMTLQ 464
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 193/475 (40%), Gaps = 45/475 (9%)
Query: 33 SRKVNLPPGPKPWPFIGNL---NLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXX 89
S K LPPGP P P +GNL + G L S L +KYG + +
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 90 XXXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICL--MELLGTKRL 147
+F+ R + Y G+ A G WR R+ L M G +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKR 121
Query: 148 DQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYT---------- 197
E ++ EE + EL KS + +++ IC +V GKR+
Sbjct: 122 SVEERIQ-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 198 DKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYE 257
D ++ F+ + ELF +G L G +++ ++++ F
Sbjct: 181 DLFFQSFSLISSFSSQVFELF--SGFLKY-----------FPGTHRQIYRNLQEINTFIG 227
Query: 258 DILDEHYARRKSIKDYGVHDMVDVLLHLAD----DPSLEVKLEREHIKALIQDLLTAGTD 313
+++H R ++ D +DV L + DPS E +++ + L AGT+
Sbjct: 228 QSVEKH---RATLDPSNPRDFIDVYLLRMEKDKSDPSSE--FHHQNLILTVLSLFAAGTE 282
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + + +LK P ++ +E+++ IG R D +PY A++ E RL
Sbjct: 283 TTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGD 342
Query: 374 VAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVK 433
+ P P +D + GY I KNT V + + DP +E PN F P F+ +K
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK 402
Query: 434 GHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDR 488
++ +PF G+R+C+G G+ + +L F P + ED+++ R
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPR 454
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 193/475 (40%), Gaps = 45/475 (9%)
Query: 33 SRKVNLPPGPKPWPFIGNL---NLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXX 89
S K LPPGP P P +GNL + G L S L +KYG + +
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 90 XXXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICL--MELLGTKRL 147
+F+ R + Y G+ A G WR R+ L M G +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKR 121
Query: 148 DQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYT---------- 197
E ++ EE + EL KS + +++ IC +V GKR+
Sbjct: 122 SVEERIQ-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 198 DKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYE 257
D ++ F+ + ELF +G L G +++ ++++ F
Sbjct: 181 DLFFQSFSLISSFSSQVFELF--SGFLKY-----------FPGTHRQIYRNLQEINTFIG 227
Query: 258 DILDEHYARRKSIKDYGVHDMVDVLLHLAD----DPSLEVKLEREHIKALIQDLLTAGTD 313
+++H R ++ D +DV L + DPS E +++ + L AGT+
Sbjct: 228 QSVEKH---RATLDPSNPRDFIDVYLLRMEKDKSDPSSE--FHHQNLILTVLSLFFAGTE 282
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + + +LK P ++ +E+++ IG R D +PY A++ E RL
Sbjct: 283 TTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGD 342
Query: 374 VAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVK 433
+ P P +D + GY I KNT V + + DP +E PN F P F+ +K
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK 402
Query: 434 GHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDR 488
++ +PF G+R+C+G G+ + +L F P + ED+++ R
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPR 454
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 193/475 (40%), Gaps = 45/475 (9%)
Query: 33 SRKVNLPPGPKPWPFIGNL---NLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXX 89
S K LPPGP P P +GNL + G L S L +KYG + +
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 90 XXXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICL--MELLGTKRL 147
+F+ R + Y G+ A G WR R+ L M G +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKR 121
Query: 148 DQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYT---------- 197
E ++ EE + EL KS + +++ IC +V GKR+
Sbjct: 122 SVEERIQ-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 198 DKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYE 257
D ++ F+ + ELF +G L G +++ ++++ F
Sbjct: 181 DLFFQSFSLISSFSSQVFELF--SGFLKY-----------FPGTHRQIYRNLQEINTFIG 227
Query: 258 DILDEHYARRKSIKDYGVHDMVDVLLHLAD----DPSLEVKLEREHIKALIQDLLTAGTD 313
+++H R ++ D +DV L + DPS E +++ + L AGT+
Sbjct: 228 QSVEKH---RATLDPSNPRDFIDVYLLRMEKDKSDPSSE--FHHQNLILTVLSLFFAGTE 282
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + + +LK P ++ +E+++ IG R D +PY A++ E RL
Sbjct: 283 TTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGD 342
Query: 374 VAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVK 433
+ P P +D + GY I KNT V + + DP +E PN F P F+ +K
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK 402
Query: 434 GHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDR 488
++ +PF G+R+C+G G+ + +L F P + ED+++ R
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPR 454
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 193/475 (40%), Gaps = 45/475 (9%)
Query: 33 SRKVNLPPGPKPWPFIGNL---NLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXX 89
S K LPPGP P P +GNL + G L S L +KYG + +
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 90 XXXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICL--MELLGTKRL 147
+F+ R + Y G+ A G WR R+ L M G +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKR 121
Query: 148 DQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYT---------- 197
E ++ EE + EL KS + +++ IC +V GKR+
Sbjct: 122 SVEERIQ-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 198 DKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYE 257
D ++ F+ + ELF +G L G +++ ++++ F
Sbjct: 181 DLFFQSFSLISSFSSQVFELF--SGFLK-----------HFPGTHRQIYRNLQEINTFIG 227
Query: 258 DILDEHYARRKSIKDYGVHDMVDVLLHLAD----DPSLEVKLEREHIKALIQDLLTAGTD 313
+++H R ++ D +DV L + DPS E +++ + L AGT+
Sbjct: 228 QSVEKH---RATLDPSNPRDFIDVYLLRMEKDKSDPSSE--FHHQNLILTVLSLFFAGTE 282
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + + +LK P ++ +E+++ IG R D +PY A++ E RL
Sbjct: 283 TTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGD 342
Query: 374 VAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVK 433
+ P P +D + GY I KNT V + + DP +E PN F P F+ +K
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK 402
Query: 434 GHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDR 488
++ +PF G+R+C+G G+ + +L F P + ED+++ R
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPR 454
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 192/475 (40%), Gaps = 45/475 (9%)
Query: 33 SRKVNLPPGPKPWPFIGNL---NLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXX 89
S K LPPGP P P +GNL + G L S L +KYG + +
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 90 XXXXXXKTHDISFASRPALLAGKYTTYNYSGMATAPYGPYWRQARKICL--MELLGTKRL 147
+F+ R + Y G+ A G WR R+ L M G +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKR 121
Query: 148 DQFEYMRVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYT---------- 197
E ++ EE + EL KS + +++ IC +V GKR+
Sbjct: 122 SVEERIQ-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 198 DKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYE 257
D ++ F+ + ELF +G L G +++ ++++ F
Sbjct: 181 DLFFQSFSLISSFSSQVFELF--SGFLKY-----------FPGTHRQIYRNLQEINTFIG 227
Query: 258 DILDEHYARRKSIKDYGVHDMVDVLLHLAD----DPSLEVKLEREHIKALIQDLLTAGTD 313
+++H R ++ D +DV L + DPS E +++ + L AGT+
Sbjct: 228 QSVEKH---RATLDPSNPRDFIDVYLLRMEKDKSDPSSE--FHHQNLILTVLSLFFAGTE 282
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + + +LK P ++ +E+++ IG R D +PY A++ E RL
Sbjct: 283 TTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGD 342
Query: 374 VAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVK 433
+ P P +D + GY I KNT V + + DP +E PN F P F+ +K
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK 402
Query: 434 GHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDR 488
++ +PF G+R+C G G+ + +L F P + ED+++ R
Sbjct: 403 RNE-GFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPR 454
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 133/261 (50%), Gaps = 20/261 (7%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTD 313
K D++D+ A RK+ + D++ +LH DP L+ E+I+ I L AG +
Sbjct: 211 KVMNDLVDKIIADRKASGEQS-DDLLTHMLH-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +R+ P
Sbjct: 269 TTSGLLTFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRIWP 327
Query: 374 VAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKEID 431
AP + A+ED + G Y + K +MV + + RD T+W + EFRPERF
Sbjct: 328 TAPAFS-LYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA- 385
Query: 432 VKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGL 491
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++E+ L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIEETLTL 440
Query: 492 --------TMSRKVPLVVVPS 504
S+K+PL +PS
Sbjct: 441 KPKGFVIKAKSKKIPLGGIPS 461
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 132/261 (50%), Gaps = 20/261 (7%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTD 313
K D++D+ A RK+ + D++ +LH DP L+ E+I+ I L AG +
Sbjct: 216 KVMNDLVDKIIADRKASGEQS-DDLLTHMLH-GKDPETGEPLDDENIRYQIVTFLIAGHE 273
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + + + L+K+P +QKA EE R + D K + L Y+ ++ E +RL P
Sbjct: 274 TTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 332
Query: 374 VAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKEID 431
AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 333 TAPAFS-LYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 390
Query: 432 VKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGL 491
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++ L
Sbjct: 391 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 445
Query: 492 --------TMSRKVPLVVVPS 504
S+K+PL +PS
Sbjct: 446 KPEGFVVKAKSKKIPLGGIPS 466
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 326 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 439 TLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 213 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 268
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 269 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 327
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 328 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 386
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 387 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 440
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 441 TLKPEGFVVKAKSKKIPLGGIPS 463
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 326 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 439 TLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGKQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 326 WPTAPPFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 439 TLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 213 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 268
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 269 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 327
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P +P + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 328 WPTSPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 386
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 387 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 440
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 441 TLKPEGFVVKAKSKKIPLGGIPS 463
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITELIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HEATSGLLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD T+W + EFRPERF
Sbjct: 326 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 439 TLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L G
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLICG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HEATSGLLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 213 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 268
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 269 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 327
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P P + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 328 WPTVPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 386
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 387 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 440
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 441 TLKPEGFVVKAKSKKIPLGGIPS 463
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L G
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L G
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIMG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L G
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIEG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L G
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIKG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
++++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPSKPRL 508
L S+K+PL +PS L
Sbjct: 438 LLKPEGFVVKAKSKKIPLGGIPSPSTL 464
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
++++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 326 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPSKPRL 508
L S+K+PL +PS L
Sbjct: 439 LLKPEGFVVKAKSKKIPLGGIPSPSTL 465
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L G
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIHG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 159/370 (42%), Gaps = 22/370 (5%)
Query: 127 GPYWRQARKICLMEL----LGTKRLDQFEYMRV-EERNAFLFELFKSVSTYVHLKDHLYT 181
G W+ R+ + + +G + +++ R+ EE + EL KS + +
Sbjct: 99 GNRWKVLRRFSVTTMRDFGMGKRSVEE----RIQEEAQCLIEELRKSKGALMDPTFLFQS 154
Query: 182 LNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLLNGILD--IGDSIPWLASFDLQ 239
+ IC +V GKR+ + + +F +ML + ++ G + F L+
Sbjct: 155 ITANIICSIVFGKRFHYQDQ-------EFLKMLNLFYQTFSLISSVFGQLFELFSGF-LK 206
Query: 240 GHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDV-LLHLADDPS-LEVKLER 297
+ V K L + I R+++ D++D LLH+ + S +
Sbjct: 207 HFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSH 266
Query: 298 EHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVS 357
+++ L AGT+T++ + + +LK P ++ E+++ IG R E D
Sbjct: 267 QNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAK 326
Query: 358 LPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKP 417
+PY +A++ E R + P+ P + + GY I K+T V + + DP +EKP
Sbjct: 327 MPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKP 386
Query: 418 NEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGD 477
+ F P+ F+ +K + +PF G+R+C+G G+ + +L F P
Sbjct: 387 DAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVA 445
Query: 478 MKNEDLNMED 487
++ DL ++
Sbjct: 446 PEDIDLTPQE 455
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R C G L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACEGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 TLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 326 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R C G L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACPGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 439 TLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
++++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETQ 437
Query: 490 GL--------TMSRKVPLVVVPSKPRL 508
L S+K+PL +PS L
Sbjct: 438 LLKPEGFVVKAKSKKIPLGGIPSPSTL 464
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P P + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTGPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 438 VLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 24/263 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAG 266
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 267 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 325
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P P + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 326 WPTGPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 385 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 438
Query: 490 GL--------TMSRKVPLVVVPS 504
L S+K+PL +PS
Sbjct: 439 VLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 307 LLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVK 366
+ AG +T++ + + M EL P+ QK EE+D + ++ + YL +V
Sbjct: 282 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 341
Query: 367 ETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFI 426
ET+RL P+A L RV ++D ++ G I K VM+ +A+ RDP W +P +F PERF
Sbjct: 342 ETLRLFPIAMRLE-RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 400
Query: 427 GKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWK 473
K D + PFGSG R CIG L ++ L +L F +K
Sbjct: 401 KKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 307 LLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVK 366
+ AG +T++ + + M EL P+ QK EE+D + ++ + YL +V
Sbjct: 280 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 339
Query: 367 ETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFI 426
ET+RL P+A L RV ++D ++ G I K VM+ +A+ RDP W +P +F PERF
Sbjct: 340 ETLRLFPIAMRLE-RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 398
Query: 427 GKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWK 473
K D + PFGSG R CIG L ++ L +L F +K
Sbjct: 399 KKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 307 LLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVK 366
+ AG +T++ + + M EL P+ QK EE+D + ++ + YL +V
Sbjct: 281 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 340
Query: 367 ETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFI 426
ET+RL P+A L RV ++D ++ G I K VM+ +A+ RDP W +P +F PERF
Sbjct: 341 ETLRLFPIAMRLE-RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 399
Query: 427 GKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWK 473
K D + PFGSG R CIG L ++ L +L F +K
Sbjct: 400 KKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ P+G+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PYGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HENTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+ ++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ P+G+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PWGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ P G+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PHGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD--DPSLEVKLEREHIKALIQDLLTAG 311
K D++D+ A RK+ + D+L H+ + DP L+ E+I+ I L AG
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 TDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRL 371
+T++ + +A+ L+K+P +QKA EE R + D K + L Y+ ++ E +RL
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 372 HPVAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKE 429
P AP + A+ED + G Y + K +MV + + RD TIW + EFRPERF
Sbjct: 325 WPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
Query: 430 IDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRF 489
+ H F+ P G+G+R CIG L L +L F+++ D N +L++++
Sbjct: 384 A-IPQHAFK--PAGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL 437
Query: 490 GL--------TMSRKVPL 499
L S+K+PL
Sbjct: 438 TLKPEGFVVKAKSKKIPL 455
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTD 313
K D++D+ A RK+ + D++ +L+ DP L+ +I I L AG +
Sbjct: 210 KVMNDLVDKIIADRKASGEQS-DDLLTQMLN-GKDPETGEPLDDGNISYQIITFLIAGHE 267
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T++ + +A+ L+K+P +QK EE R + D K + L Y+ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 374 VAPLLAPRVAREDCKVAG-YDILKNTRVMVNVWAIGRDPTIW-EKPNEFRPERFIGKEID 431
AP + A+ED + G Y + K VMV + + RD TIW + EFRPERF
Sbjct: 327 TAPAFS-LYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 432 VKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDMKNEDLNMEDRFGL 491
+ H F+ PFG+G+R CIG L L +L F+++ D N +L++++ L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
Query: 492 --------TMSRKVPL 499
S+K+PL
Sbjct: 440 KPEGFVVKAKSKKIPL 455
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 233 LASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLE 292
LA F L G K++++V + + +F + + RR+ G D+L + L+
Sbjct: 181 LAKF-LPGKRKQLREVRESI-RFLRQVGRDWVQRRREALKRGEEVPADILTQI-----LK 233
Query: 293 VKLEREHIKALIQDLLT---AGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRW 349
+ + + L+ + +T AG +TSA ++ + + EL + PE + + E+D IG R+
Sbjct: 234 AEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRY 293
Query: 350 VEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGR 409
++ +D+ L YL ++KE++RL+P A R+ E+ + G + NT ++ + + +GR
Sbjct: 294 LDFEDLGRLQYLSQVLKESLRLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGR 352
Query: 410 DPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHG 469
T +E P F P+RF F PF G R CIG V+ +A LL
Sbjct: 353 MDTYFEDPLTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQR 409
Query: 470 FEWKL-PGDMKNEDLNMEDRFGL 491
E++L PG RFGL
Sbjct: 410 LEFRLVPG----------QRFGL 422
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 27/305 (8%)
Query: 175 LKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELF-----LLN---GILDI 226
+K+ L+ SI ++ G+R E + F + + ++F LLN + +
Sbjct: 160 IKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRL 219
Query: 227 GDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLA 286
+ W + HV + K +K Y +I + R+ ++Y +L L
Sbjct: 220 FRTKTW------RDHVAAWDTIFNKAEK-YTEIFYQDLRRKTEFRNYP-----GILYCLL 267
Query: 287 DDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGR 346
K+ E +KA I ++L G +T+++ ++W + E+ +S + EE+ A +
Sbjct: 268 KSE----KMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQ 323
Query: 347 DRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWA 406
K + +P L+A +KET+RLHP++ L R D + Y I T V V ++A
Sbjct: 324 AEGDISKMLQMVPLLKASIKETLRLHPISVTLQ-RYPESDLVLQDYLIPAKTLVQVAIYA 382
Query: 407 IGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANL 466
+GRDP + P++F P R++ K+ D+ F+ L FG G R C+G + + L ++
Sbjct: 383 MGRDPAFFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHI 440
Query: 467 LHGFE 471
L F+
Sbjct: 441 LENFK 445
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 30/306 (9%)
Query: 175 LKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLA 234
+ D L+ SI ++ G+R E + F + + ++F S+P L
Sbjct: 155 ISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMF--------HTSVPMLN 206
Query: 235 S----FDLQGHVKRMKDVSKKLDKFYE--DILDEHYARRKSIKDYGVHDMVDVLLHLADD 288
F L K KD D + DI +++ K HD +L L D
Sbjct: 207 LPPDLFRL-FRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD 265
Query: 289 PSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDR 348
K+ E IKA + ++L G DT+++ ++W + E+ ++ K + L + R
Sbjct: 266 S----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAAR 317
Query: 349 WVEEKDIVSL----PYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNV 404
+ D+ ++ P L+A +KET+RLHP++ L R D + Y I T V V +
Sbjct: 318 HQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ-RYLVNDLVLRDYMIPAKTLVQVAI 376
Query: 405 WAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLA 464
+A+GR+PT + P F P R++ K+ ++ F+ L FG G R C+G + + L
Sbjct: 377 YALGREPTFFFDPENFDPTRWLSKDKNITY--FRNLGFGWGVRQCLGRRIAELEMTIFLI 434
Query: 465 NLLHGF 470
N+L F
Sbjct: 435 NMLENF 440
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 30/306 (9%)
Query: 175 LKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLA 234
+ D L+ SI ++ G+R E + F + + ++F S+P L
Sbjct: 158 ISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMF--------HTSVPMLN 209
Query: 235 S----FDLQGHVKRMKDVSKKLDKFYE--DILDEHYARRKSIKDYGVHDMVDVLLHLADD 288
F L K KD D + DI +++ K HD +L L D
Sbjct: 210 LPPDLFRL-FRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD 268
Query: 289 PSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDR 348
K+ E IKA + ++L G DT+++ ++W + E+ ++ K + L + R
Sbjct: 269 S----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAAR 320
Query: 349 WVEEKDIVSL----PYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNV 404
+ D+ ++ P L+A +KET+RLHP++ L R D + Y I T V V +
Sbjct: 321 HQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ-RYLVNDLVLRDYMIPAKTLVQVAI 379
Query: 405 WAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLA 464
+A+GR+PT + P F P R++ K+ ++ F+ L FG G R C+G + + L
Sbjct: 380 YALGREPTFFFDPENFDPTRWLSKDKNITY--FRNLGFGWGVRQCLGRRIAELEMTIFLI 437
Query: 465 NLLHGF 470
N+L F
Sbjct: 438 NMLENF 443
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKD 354
L ++ + A + +L A +T+A ++ W + L ++P+ ++ +E+ + ++ +D
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED 338
Query: 355 IVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIW 414
+ ++PYL+A +KE+MRL P P R + + Y + K T + +N +G +
Sbjct: 339 LRNMPYLKACLKESMRLTPSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNF 397
Query: 415 EKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKL 474
E ++FRPER++ KE + + F LPFG G+RMCIG L + L ++ ++
Sbjct: 398 EDSHKFRPERWLQKEKKI--NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD--- 452
Query: 475 PGDMKNEDLNMEDRFGLTMSRKVPLVVVP 503
NE + M L SR++P+ P
Sbjct: 453 IVATDNEPVEMLHLGILVPSRELPIAFRP 481
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 259 ILDEHYARRKSIKDYGVHDMVDVLLHLA-DDPS----------LEVKLEREHIKALIQDL 307
+ EH+ I YG + + + LA + P L+ +L E IKA +L
Sbjct: 226 VWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSLEAIKANSMEL 285
Query: 308 LTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKE 367
DT+A + + EL ++P+ Q +E A +K LP L+A +KE
Sbjct: 286 TAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKE 345
Query: 368 TMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIG 427
T+RL+PV L RV D + Y I T V V ++++GR+ ++ +P + P+R++
Sbjct: 346 TLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL- 403
Query: 428 KEIDVKGHDFQLLPFGSGRRMCIG 451
+I G +F +PFG G R C+G
Sbjct: 404 -DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 21/308 (6%)
Query: 181 TLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQG 240
T+ +S C ++GK++ D+ + F ++ EL L D + SF
Sbjct: 144 TIYTSSAC--LIGKKFRDQLDGR------FAKLYHELERGTDPLAYVDPYLPIESF---- 191
Query: 241 HVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHI 300
+R + L DI++ A + D DM+DVL+ + + + + I
Sbjct: 192 --RRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTP-RFSADEI 246
Query: 301 KALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPY 360
+ ++ AG TS+ W + EL++ + +ELD G R V + +P
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQ 306
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
L+ ++KET+RLHP +L RVA+ + +V G+ I + V + R P + P++F
Sbjct: 307 LENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDF 365
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKL---PGD 477
P R+ + + + +PFG+GR C+G + +++ + LL +E+++ P
Sbjct: 366 VPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPES 425
Query: 478 MKNEDLNM 485
+N+ M
Sbjct: 426 YRNDHSKM 433
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 21/308 (6%)
Query: 181 TLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQG 240
T+ +S C ++GK++ D+ + F ++ EL L D + SF
Sbjct: 144 TIYTSSAC--LIGKKFRDQLDGR------FAKLYHELERGTDPLAYVDPYLPIESF---- 191
Query: 241 HVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHI 300
+R + L DI++ A + D DM+DVL+ + + + + I
Sbjct: 192 --RRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTP-RFSADEI 246
Query: 301 KALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPY 360
+ ++ AG TS+ W + EL++ + +ELD G R V + +P
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQ 306
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
L+ ++KET+RLHP +L RVA+ + +V G+ I + V + R P + P++F
Sbjct: 307 LENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDF 365
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKL---PGD 477
P R+ + + + +PFG+GR C+G + +++ + LL +E+++ P
Sbjct: 366 VPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPES 425
Query: 478 MKNEDLNM 485
+N+ M
Sbjct: 426 YRNDHSKM 433
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 21/308 (6%)
Query: 181 TLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLLNGILDIGDSIPWLASFDLQG 240
T+ +S C ++GK++ D+ + F ++ EL L D + SF
Sbjct: 144 TIYTSSAC--LIGKKFRDQLDGR------FAKLYHELERGTDPLAYVDPYLPIESF---- 191
Query: 241 HVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHI 300
+R + L DI++ A + D DM+DVL+ + + + + I
Sbjct: 192 --RRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTP-RFSADEI 246
Query: 301 KALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPY 360
+ ++ AG TS+ W + EL++ + +ELD G R V + +P
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQ 306
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
L+ ++KET+RLHP +L RVA+ + +V G+ I + V + R P + P++F
Sbjct: 307 LENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDF 365
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKL---PGD 477
P R+ + + + +PFG+GR C+G + +++ + LL +E+++ P
Sbjct: 366 VPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPES 425
Query: 478 MKNEDLNM 485
+N+ M
Sbjct: 426 YRNDHSKM 433
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 7/246 (2%)
Query: 243 KRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKA 302
+R + L DI++ A + D DM+DVL+ + + + + I
Sbjct: 192 RRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTP-RFSADEITG 248
Query: 303 LIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQ 362
+ ++ AG TS+ W + EL++ + +ELD G R V + +P L+
Sbjct: 249 MFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLE 308
Query: 363 AIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRP 422
++KET+RLHP +L RVA+ + +V G+ I + V + R P + P++F P
Sbjct: 309 NVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVP 367
Query: 423 ERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKL---PGDMK 479
R+ + + + +PFG+GR C+G + +++ + LL +E+++ P +
Sbjct: 368 ARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYR 427
Query: 480 NEDLNM 485
N+ M
Sbjct: 428 NDHSKM 433
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKD 354
L RE++ I ++L A DT ++++ + + + K P + +E+ IG +R ++ D
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDD 349
Query: 355 IVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIW 414
I L ++ + E+MR PV L+ R A ED + GY + K T +++N+ + R +
Sbjct: 350 IQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFF 407
Query: 415 EKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWK 473
KPNEF E F +V FQ PFG G R C G + + ++++ L LL F K
Sbjct: 408 PKPNEFTLENFAK---NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVK 461
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 362 QAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFR 421
+ V+E R +P P L V ++D + K T V+++++ DP +W+ P+EFR
Sbjct: 277 EMFVQEVRRYYPFGPFLGALV-KKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 422 PERFIGKEIDVKGHDFQLLPFGSGR----RMCIGYGLGLKVVQSTLANLLHGFEWKLP 475
PERF +E ++ F ++P G G C G G+ ++V++++L L+H E+ +P
Sbjct: 336 PERFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 253 DKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGT 312
+K E + E+ +R+SI + ++ + + L D S LE+ ++ L A
Sbjct: 219 EKLAESLRHENLQKRESISE-----LISLRMFLNDTLSTFDDLEKAKTHLVV---LWASQ 270
Query: 313 DTSAINVEWAMSELLKSPETIQKATEELDRAI----------GRDRWVEEKDIVSLPYLQ 362
+ W++ +++++PE ++ ATEE+ R + G + + ++ LP L
Sbjct: 271 ANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLD 330
Query: 363 AIVKETMRLHPVAPLLAPRVAREDCKV----AGYDILKNTRVMVNVWAIGRDPTIWEKPN 418
+I+KE++RL + L R A+ED + Y+I K+ + + + DP I+ P
Sbjct: 331 SIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL 388
Query: 419 EFRPERFIGKEIDVKGH--------DFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
F+ +R++ + K + +PFGSG +C G + ++ L +L F
Sbjct: 389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYF 448
Query: 471 EWKL 474
E +L
Sbjct: 449 ELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 253 DKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGT 312
+K E + E+ +R+SI + ++ + + L D S LE+ ++ L A
Sbjct: 219 EKLAESLRHENLQKRESISE-----LISLRMFLNDTLSTFDDLEKAKTHLVV---LWASQ 270
Query: 313 DTSAINVEWAMSELLKSPETIQKATEELDRAI----------GRDRWVEEKDIVSLPYLQ 362
+ W++ +++++PE ++ ATEE+ R + G + + ++ LP L
Sbjct: 271 ANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLD 330
Query: 363 AIVKETMRLHPVAPLLAPRVAREDCKV----AGYDILKNTRVMVNVWAIGRDPTIWEKPN 418
+I+KE++RL + L R A+ED + Y+I K+ + + + DP I+ P
Sbjct: 331 SIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL 388
Query: 419 EFRPERFIGKEIDVKGH--------DFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
F+ +R++ + K + +PFGSG +C G + ++ L +L F
Sbjct: 389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYF 448
Query: 471 EWKL 474
E +L
Sbjct: 449 ELEL 452
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 243 KRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKA 302
+R D L ++I+ E RR S + D++ LL DD + + H +
Sbjct: 214 RRFNDALADLHLLVDEIIAE---RRASGQK--PDDLLTALLEAKDDNGDPIGEQEIHDQV 268
Query: 303 LIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQ 362
+ +LT G++T A + W + L PE + +E++ G R V +D+ L +
Sbjct: 269 VA--ILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTG 325
Query: 363 AIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRP 422
++ E MRL P +L R E ++ GY I ++ + +AI RDP ++ EF P
Sbjct: 326 NVIVEAMRLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDP 384
Query: 423 ERFIGKEIDVKGHDFQLLPFGSGRRMC 449
+R++ E + + PF +G+R C
Sbjct: 385 DRWL-PERAANVPKYAMKPFSAGKRKC 410
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRW--VEE 352
L + + ++ LL AG TS+ W M L +T+QK + + + +
Sbjct: 248 LTDDEVAGMLIGLLLAGQHTSSTTSAW-MGFFLARDKTLQKKCYLEQKTVCGENLPPLTY 306
Query: 353 KDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPT 412
+ L L +KET+RL P ++ R+AR VAGY I +V V+ R
Sbjct: 307 DQLKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKD 365
Query: 413 IWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEW 472
W + +F P+R++ ++ G F +PFG+GR CIG +++ + +L +E+
Sbjct: 366 SWVERLDFNPDRYL-QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
Query: 473 KL 474
L
Sbjct: 425 DL 426
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 158/392 (40%), Gaps = 39/392 (9%)
Query: 98 HDISFASRPALLAGK--YTTYN-YSGMATAPYGPYWRQARKI-CLMELLGTKRLDQFEYM 153
H F+ R +L+ + YT G A PY R ++ L E L + F
Sbjct: 63 HSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA 122
Query: 154 RVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEM 213
E F+ E +K ++L + + + C+ + G+ + + + F ++
Sbjct: 123 IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDL-----RKRLNARHFAQL 177
Query: 214 LEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRK--SIK 271
L ++ + ++ +PWL L R ++ +L K +I+ AR K + K
Sbjct: 178 LSKM--ESSLIPAAVFMPWLLRLPLP-QSARCREARAELQKILGEII---VAREKEEASK 231
Query: 272 DYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELL---- 327
D D++ LL + L + +I + AG TS I W+M L+
Sbjct: 232 DNNTSDLLGGLLKAVYRDGTRMSLH--EVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 289
Query: 328 -KSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLL-APRVARE 385
K + + K +E + D ++E +P+ + V+E++R P PLL R+ +
Sbjct: 290 KKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDP--PLLMVMRMVKA 342
Query: 386 DCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSG 445
+ KV Y + K + + D + P + PER D K D + FG+G
Sbjct: 343 EVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAG 395
Query: 446 RRMCIGYGLGLKVVQSTLANLLHGFEWKLPGD 477
CIG L V++ LA ++++L D
Sbjct: 396 VHKCIGQKFALLQVKTILATAFREYDFQLLRD 427
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 158/392 (40%), Gaps = 39/392 (9%)
Query: 98 HDISFASRPALLAGK--YTTYN-YSGMATAPYGPYWRQARKI-CLMELLGTKRLDQFEYM 153
H F+ R +L+ + YT G A PY R ++ L E L + F
Sbjct: 72 HSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA 131
Query: 154 RVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEM 213
E F+ E +K ++L + + + C+ + G+ + + + F ++
Sbjct: 132 IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDL-----RKRLNARHFAQL 186
Query: 214 LEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRK--SIK 271
L ++ + ++ +PWL L R ++ +L K +I+ AR K + K
Sbjct: 187 LSKM--ESSLIPAAVFMPWLLRLPLP-QSARCREARAELQKILGEII---VAREKEEASK 240
Query: 272 DYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELL---- 327
D D++ LL + L + +I + AG TS I W+M L+
Sbjct: 241 DNNTSDLLGGLLKAVYRDGTRMSLH--EVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 298
Query: 328 -KSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLL-APRVARE 385
K + + K +E + D ++E +P+ + V+E++R P PLL R+ +
Sbjct: 299 KKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDP--PLLMVMRMVKA 351
Query: 386 DCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSG 445
+ KV Y + K + + D + P + PER D K D + FG+G
Sbjct: 352 EVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAG 404
Query: 446 RRMCIGYGLGLKVVQSTLANLLHGFEWKLPGD 477
CIG L V++ LA ++++L D
Sbjct: 405 VHKCIGQKFALLQVKTILATAFREYDFQLLRD 436
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 158/392 (40%), Gaps = 39/392 (9%)
Query: 98 HDISFASRPALLAGK--YTTYN-YSGMATAPYGPYWRQARKI-CLMELLGTKRLDQFEYM 153
H F+ R +L+ + YT G A PY R ++ L E L + F
Sbjct: 57 HSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA 116
Query: 154 RVEERNAFLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEM 213
E F+ E +K ++L + + + C+ + G+ + + + F ++
Sbjct: 117 IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDL-----RKRLNARHFAQL 171
Query: 214 LEELFLLNGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRK--SIK 271
L ++ + ++ +PWL L R ++ +L K +I+ AR K + K
Sbjct: 172 LSKM--ESSLIPAAVFMPWLLRLPLP-QSARCREARAELQKILGEII---VAREKEEASK 225
Query: 272 DYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELL---- 327
D D++ LL + L + +I + AG TS I W+M L+
Sbjct: 226 DNNTSDLLGGLLKAVYRDGTRMSLH--EVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 283
Query: 328 -KSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLL-APRVARE 385
K + + K +E + D ++E +P+ + V+E++R P PLL R+ +
Sbjct: 284 KKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDP--PLLMVMRMVKA 336
Query: 386 DCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSG 445
+ KV Y + K + + D + P + PER D K D + FG+G
Sbjct: 337 EVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAG 389
Query: 446 RRMCIGYGLGLKVVQSTLANLLHGFEWKLPGD 477
CIG L V++ LA ++++L D
Sbjct: 390 VHKCIGQKFALLQVKTILATAFREYDFQLLRD 421
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 176/445 (39%), Gaps = 45/445 (10%)
Query: 46 PFIGNLNLIGPLPHVSIHSLSQKYGPLMHLKFXXXXXXXXXXXXXXXXXXKTHDISFASR 105
PF+G++ G P + +KYG + + H F R
Sbjct: 13 PFVGHIIQFGKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDV-------HQHSKFFTPR 65
Query: 106 PALLAGKYTTYNYS----GMATAPYGPYWRQARKI-CLMELLGTKRLDQFEYMRVEERNA 160
+L+ + Y++ G A PY R ++ L E L + F E
Sbjct: 66 NEILSPR-EVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSIQHEVRK 124
Query: 161 FLFELFKSVSTYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKNTVTPKDFTEMLEELFLL 220
F+ + +++ D + + C+ + G+ + + + F ++L ++
Sbjct: 125 FMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDA-----RQFAQLLAKM--E 177
Query: 221 NGILDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRK--SIKDYGVHDM 278
+ ++ +PW+ L R +D +L +I+ AR K + KD D+
Sbjct: 178 SCLIPAAVFLPWILKLPLP-QSYRCRDARAELQDILSEII---IAREKEEAQKDTNTSDL 233
Query: 279 VDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELL--KSPETIQKA 336
+ LL ++ + + +I + AG TS I W++ L+ ++ + K
Sbjct: 234 LAGLLGAVYRDG--TRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKL 291
Query: 337 TEELDR---AIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYD 393
+E+D + D +EE +P+ + +E++R P +L +V + +V Y
Sbjct: 292 HQEIDEFPAQLNYDNVMEE-----MPFAEQCARESIRRDPPLVMLMRKVLKP-VQVGKYV 345
Query: 394 ILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYG 453
+ + + + +D + P E+ PER ++K D FG+G CIG
Sbjct: 346 VPEGDIIACSPLLSHQDEEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKCIGEK 399
Query: 454 LGLKVVQSTLANLLHGFEWKLPGDM 478
GL V++ LA +L ++++L G +
Sbjct: 400 FGLLQVKTVLATVLRDYDFELLGPL 424
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 276 HDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAG--TDTSAINVEWAMSELLKSPETI 333
D + +LL DD + + L +K I LL AG T TSA++ + LL I
Sbjct: 222 EDALGILLAARDDNNQPLSLP--ELKDQILLLLFAGHETLTSALS---SFCLLLGQHSDI 276
Query: 334 QKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAP-RVAREDCKVAGY 392
++ + + + + + + +PYL +++E +RL P P+ R +DC+ G+
Sbjct: 277 RERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIP--PVGGGFRELIQDCQFQGF 334
Query: 393 DILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGY 452
K V + DP ++ P +F PERF F +PFG G R C+G
Sbjct: 335 HFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGK 394
Query: 453 GLGLKVVQSTLANLLHGFEWK-LPGD 477
++ L+ F+W LPG
Sbjct: 395 EFARLEMKLFATRLIQQFDWTLLPGQ 420
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 25/230 (10%)
Query: 257 EDILDEHYARRKSI---KDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTD 313
+ IL E RK+ KD D++ LL + L + +I + AG
Sbjct: 223 QKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLH--EVCGMIVAAMFAGQH 280
Query: 314 TSAINVEWAMSELL-----KSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKET 368
TS+I W+M L+ K E ++K EE + + ++E +P+ + +E+
Sbjct: 281 TSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARES 335
Query: 369 MRLHPVAPLLA-PRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIG 427
+R P PLL R D KV Y + K + + D + +P + PER
Sbjct: 336 IRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 390
Query: 428 KEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGD 477
+ V+G + FG+G CIG GL V++ LA ++++L D
Sbjct: 391 -DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 436
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 25/241 (10%)
Query: 244 RMKDVSKKLDKFYEDILDEHYARRKS--IKDYGVHDMVDVLLHLADDPSLEVKLEREHIK 301
R + +L K +I+ AR++ KD D++ LL + L +
Sbjct: 202 RCHEARTELQKILSEII---IARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLH--EVC 256
Query: 302 ALIQDLLTAGTDTSAINVEWAMSELL-----KSPETIQKATEELDRAIGRDRWVEEKDIV 356
+I + AG TS+I W+M L+ K E ++K EE + + ++E
Sbjct: 257 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 312
Query: 357 SLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEK 416
+P+ + +E++R P +L +V D KV Y + K + + D + +
Sbjct: 313 -MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPE 370
Query: 417 PNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
P + PER + V+G + FG+G CIG GL V++ LA ++++L
Sbjct: 371 PRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 423
Query: 477 D 477
D
Sbjct: 424 D 424
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 25/241 (10%)
Query: 244 RMKDVSKKLDKFYEDILDEHYARRKS--IKDYGVHDMVDVLLHLADDPSLEVKLEREHIK 301
R + +L K +I+ AR++ KD D++ LL + L +
Sbjct: 214 RCHEARTELQKILSEII---IARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLH--EVC 268
Query: 302 ALIQDLLTAGTDTSAINVEWAMSELL-----KSPETIQKATEELDRAIGRDRWVEEKDIV 356
+I + AG TS+I W+M L+ K E ++K EE + + ++E
Sbjct: 269 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 324
Query: 357 SLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEK 416
+P+ + +E++R P +L +V D KV Y + K + + D + +
Sbjct: 325 -MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPE 382
Query: 417 PNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
P + PER + V+G + FG+G CIG GL V++ LA ++++L
Sbjct: 383 PRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 435
Query: 477 D 477
D
Sbjct: 436 D 436
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 25/241 (10%)
Query: 244 RMKDVSKKLDKFYEDILDEHYARRKS--IKDYGVHDMVDVLLHLADDPSLEVKLEREHIK 301
R + +L K +I+ AR++ KD D++ LL + L +
Sbjct: 201 RCHEARTELQKILSEII---IARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLH--EVC 255
Query: 302 ALIQDLLTAGTDTSAINVEWAMSELL-----KSPETIQKATEELDRAIGRDRWVEEKDIV 356
+I + AG TS+I W+M L+ K E ++K EE + + ++E
Sbjct: 256 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 311
Query: 357 SLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEK 416
+P+ + +E++R P +L +V D KV Y + K + + D + +
Sbjct: 312 -MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPE 369
Query: 417 PNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
P + PER + V+G + FG+G CIG GL V++ LA ++++L
Sbjct: 370 PRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 422
Query: 477 D 477
D
Sbjct: 423 D 423
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 27/242 (11%)
Query: 244 RMKDVSKKLDKFYEDILDEHYARRKS--IKDYGVHDMVDVLLHLADDPSLEVKLEREHIK 301
R + +L K +I+ AR++ KD D++ LL + L +
Sbjct: 200 RCHEARTELQKILSEII---IARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLH--EVC 254
Query: 302 ALIQDLLTAGTDTSAINVEWAMSELL-----KSPETIQKATEELDRAIGRDRWVEEKDIV 356
+I + AG TS+I W+M L+ K E ++K EE + + ++E
Sbjct: 255 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 310
Query: 357 SLPYLQAIVKETMRLHPVAPLLA-PRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWE 415
+P+ + +E++R P PLL R D KV Y + K + + D +
Sbjct: 311 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 367
Query: 416 KPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLP 475
+P + PER + V+G + FG+G CIG GL V++ LA ++++L
Sbjct: 368 EPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 420
Query: 476 GD 477
D
Sbjct: 421 RD 422
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 27/242 (11%)
Query: 244 RMKDVSKKLDKFYEDILDEHYARRKS--IKDYGVHDMVDVLLHLADDPSLEVKLEREHIK 301
R + +L K +I+ AR++ KD D++ LL + L +
Sbjct: 201 RCHEARTELQKILSEII---IARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLH--EVC 255
Query: 302 ALIQDLLTAGTDTSAINVEWAMSELL-----KSPETIQKATEELDRAIGRDRWVEEKDIV 356
+I + AG TS+I W+M L+ K E ++K EE + + ++E
Sbjct: 256 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 311
Query: 357 SLPYLQAIVKETMRLHPVAPLLA-PRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWE 415
+P+ + +E++R P PLL R D KV Y + K + + D +
Sbjct: 312 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 416 KPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLP 475
+P + PER + V+G + FG+G CIG GL V++ LA ++++L
Sbjct: 369 EPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 421
Query: 476 GD 477
D
Sbjct: 422 RD 423
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 259 ILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAIN 318
+LDE RR ++ +D++ +LL D S +L + + AL+ ++ AGTDT+
Sbjct: 212 VLDER--RRNPLE----NDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYL 262
Query: 319 VEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLL 378
+ +A+ LL+SPE ++ E ++ + E +R + +
Sbjct: 263 IAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFENILRIG 304
Query: 379 APRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQ 438
R AR+D + G I K V + + + RD T++ +P+ F DV+
Sbjct: 305 TVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSA 354
Query: 439 LLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF-EWKL 474
L +G G +C G L + + + F E KL
Sbjct: 355 SLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKL 391
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 259 ILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAIN 318
+LDE RR ++ +D++ +LL D S +L + + AL+ ++ AGTDT+
Sbjct: 212 VLDER--RRNPLE----NDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYL 262
Query: 319 VEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLL 378
+ +A+ LL+SPE ++ E ++ + E +R + +
Sbjct: 263 IAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFDNILRIG 304
Query: 379 APRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQ 438
R AR+D + G I K V + + + RD T++ +P+ F DV+
Sbjct: 305 TVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSA 354
Query: 439 LLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF-EWKL 474
L +G G +C G L + + + F E KL
Sbjct: 355 SLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKL 391
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 270 IKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKS 329
IK+ V+ D++ L + L + I ALI ++L A T+ + + + LL +
Sbjct: 229 IKERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNN 288
Query: 330 PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKV 389
PE + DR++ + + ET+R P L+ PR +D V
Sbjct: 289 PEQMNDVLA--DRSL----------------VPRAIAETLRYKPPVQLI-PRQLSQDTVV 329
Query: 390 AGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGH---DFQLLPFGSGR 446
G +I K+T V + A RDP +E+P+ F R +++ +K + L FGSG
Sbjct: 330 GGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR---EDLGIKSAFSGAARHLAFGSGI 386
Query: 447 RMCIGYGLGLKVVQSTLANLL 467
C+G ++ +AN++
Sbjct: 387 HNCVGTAFAKNEIE-IVANIV 406
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 360 YLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
Y + V+E R +P P + R A +D + G + +V+++++ D W P E
Sbjct: 273 YAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRM----CIGYGLGLKVVQSTLANLLHGFEWKLP 475
FRPERF + D F +P G G C G + L +++ L++ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
Query: 476 GDMKNEDLNME 486
++DL+++
Sbjct: 388 ----DQDLSID 394
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKD 354
L+ ++ L+ +L AG +T+ + AM + + P D+W++ K+
Sbjct: 238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP----------------DQWMKIKE 281
Query: 355 IVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIW 414
L V+E +R P P+ A RVA ED +V G I T V + RDP ++
Sbjct: 282 NPEL--APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF 339
Query: 415 EKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANL 466
+ F +I VK + + FG G C+G L + +A L
Sbjct: 340 ADADRF--------DITVK-REAPSIAFGGGPHFCLGTALARLELTEAVAAL 382
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKD 354
L+ ++ L+ +L AG +T+ + AM + + P D+W++ K+
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP----------------DQWMKIKE 271
Query: 355 IVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIW 414
L V+E +R P P+ A RVA ED +V G I T V + RDP ++
Sbjct: 272 NPEL--APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF 329
Query: 415 EKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANL 466
+ F +I VK + + FG G C+G L + +A L
Sbjct: 330 ADADRF--------DITVK-REAPSIAFGGGPHFCLGTALARLELTEAVAAL 372
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 360 YLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
Y + V+E R +P P + R A +D + G + +V+++++ D W P E
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRM----CIGYGLGLKVVQSTLANLLHGFEWKLP 475
FRPERF + D F +P G G C G + L +++ L++ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
Query: 476 GDMKNEDLNME 486
++DL+++
Sbjct: 388 ----DQDLSID 394
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 360 YLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
Y + V+E R +P P + R A +D + G + +V+++++ D W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRM----CIGYGLGLKVVQSTLANLLHGFEWKLP 475
FRPERF + D F +P G G C G + L +++ L++ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
Query: 476 GDMKNEDLNME 486
++DL+++
Sbjct: 380 ----DQDLSID 386
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 360 YLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
Y + V+E R +P P + R A +D + G + +V+++++ D W P E
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRM----CIGYGLGLKVVQSTLANLLHGFEWKLP 475
FRPERF + D F +P G G C G + L +++ L++ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
Query: 476 GDMKNEDLNME 486
++DL+++
Sbjct: 388 ----DQDLSID 394
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 360 YLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
Y + V+E R +P P + R A +D + G + +V+++++ D W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRM----CIGYGLGLKVVQSTLANLLHGFEWKLP 475
FRPERF + D F +P G G C G + L +++ L++ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
Query: 476 GDMKNEDLNME 486
++DL+++
Sbjct: 380 ----DQDLSID 386
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 360 YLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
Y + V+E R +P P + R A +D + G + +V+++++ D W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRM----CIGYGLGLKVVQSTLANLLHGFEWKLP 475
FRPERF + D F +P G G C G + L +++ L++ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
Query: 476 GDMKNEDLNME 486
++DL+++
Sbjct: 380 ----DQDLSID 386
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 266 RRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSE 325
RR KD DV+ LA+ ++ ++I A + TAG DT++ + A+
Sbjct: 230 RRSCPKD-------DVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIG 282
Query: 326 LLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMR-LHPVAPLLAPRVAR 384
L ++PE + A + D +P L V E +R PV + R A
Sbjct: 283 LSRNPEQLALA---------------KSDPALIPRL---VDEAVRWTAPVKSFM--RTAL 322
Query: 385 EDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGS 444
D +V G +I + R+M++ + RD ++ P+EF RF + L FG
Sbjct: 323 ADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNRH----------LGFGW 372
Query: 445 GRRMCIGYGLG 455
G MC+G L
Sbjct: 373 GAHMCLGQHLA 383
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 30/185 (16%)
Query: 294 KLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEK 353
+L + I A LL AG +T+ + A +L++P + RA
Sbjct: 240 QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGSRA---------- 289
Query: 354 DIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTI 413
A+++ETMR P L++ R A +D + + + K +++ + A RDPTI
Sbjct: 290 --------SAVIEETMRYDPPVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTI 340
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF-EW 472
P+ F P+R + L FG G C+G L L L F E
Sbjct: 341 VGAPDRFDPDR----------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEA 390
Query: 473 KLPGD 477
+L G+
Sbjct: 391 RLSGE 395
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 41/211 (19%)
Query: 271 KDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSP 330
K + DM+ +LL + KL E + L AG +T+ + ++ LL+ P
Sbjct: 199 KRHPQQDMISMLLKGREKD----KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP 254
Query: 331 ETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVA 390
E + K E D IG V+E +R + A RVA ED +
Sbjct: 255 EQLLKLRENPD-LIG-----------------TAVEECLRYESPTQMTA-RVASEDIDIC 295
Query: 391 GYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCI 450
G I + +V + + A RDP+I+ P+ F D+ L FG G +C+
Sbjct: 296 GVTIRQGEQVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFGHGHHVCL 345
Query: 451 GYGLGLKVVQSTLANLLH--------GFEWK 473
G L Q + LL FEW+
Sbjct: 346 GSSLARLEAQIAINTLLQRMPSLNLADFEWR 376
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 319 VEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIV--SLPYLQAIVKETMRLHPVAP 376
+++ M ++ ET + R I E DI+ +L V+ET+R +
Sbjct: 179 IKYIMLLIIGGNETTTNLIGNMIRVID-----ENPDIIDDALKNRSGFVEETLRYYSPIQ 233
Query: 377 LLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHD 436
L R A ED + I K +V+V + + RD T +++P+ F+ R +E+
Sbjct: 234 FLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR---REMH----- 285
Query: 437 FQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFE 471
L FG G MC+G L L ++L+ F+
Sbjct: 286 ---LAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 65/173 (37%), Gaps = 33/173 (19%)
Query: 307 LLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQA-IV 365
LL A DT+A + + LL SP+ + E+ P L V
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLRED-------------------PSLVGNAV 274
Query: 366 KETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERF 425
+E +R + RVA D ++ G I K +V+ +V A DP E+P F
Sbjct: 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF----- 329
Query: 426 IGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGFEWKLP 475
D+ L FG G CIG L L++V TL L G P
Sbjct: 330 -----DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 65/173 (37%), Gaps = 33/173 (19%)
Query: 307 LLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQA-IV 365
LL A DT+A + + LL SP+ + E+ P L V
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLRED-------------------PSLVGNAV 274
Query: 366 KETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERF 425
+E +R + RVA D ++ G I K +V+ +V A DP E+P F
Sbjct: 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF----- 329
Query: 426 IGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGFEWKLP 475
D+ L FG G CIG L L++V TL L G P
Sbjct: 330 -----DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 65/173 (37%), Gaps = 33/173 (19%)
Query: 307 LLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQA-IV 365
LL A DT+A + + LL SP+ + E+ P L V
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLRED-------------------PSLVGNAV 274
Query: 366 KETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERF 425
+E +R + RVA D ++ G I K +V+ +V A DP E+P F
Sbjct: 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF----- 329
Query: 426 IGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGFEWKLP 475
D+ L FG G CIG L L++V TL L G P
Sbjct: 330 -----DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 292 EVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVE 351
E L+ + + + LL AG +T+ + L++ PE I D +
Sbjct: 225 EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQI-------------DVLLR 271
Query: 352 EKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDP 411
+ VS +V+E +R V+ + R+A+ED +V G I V+V++ + RD
Sbjct: 272 DPGAVS-----GVVEELLRFTSVSDHIV-RMAKEDIEVGGATIKAGDAVLVSITLMNRDA 325
Query: 412 TIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFE 471
+E P+ F R + + H + FG G C+G L ++ L L G
Sbjct: 326 KAYENPDIFDARR------NARHH----VGFGHGIHQCLGQNL----ARAELEIALGGLF 371
Query: 472 WKLPG 476
++PG
Sbjct: 372 ARIPG 376
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 294 KLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEK 353
+++RE + + LL AG +T+A ++ LL PE Q A DR++
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 354 DIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTI 413
+ V+E +R +A + RVA D +V G I V+V RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGF 470
+E P+ +D+ L FG G C+G L L+V+ + L + +
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
Query: 471 EWKLP 475
+P
Sbjct: 380 RLAVP 384
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 294 KLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEK 353
+++RE + + LL AG +T+A ++ LL PE Q A DR++
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 354 DIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTI 413
+ V+E +R +A + RVA D +V G I V+V RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGF 470
+E P+ +D+ L FG G C+G L L+V+ + L + +
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
Query: 471 EWKLP 475
+P
Sbjct: 380 RLAVP 384
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 294 KLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEK 353
+++RE + + LL AG +T+A ++ LL PE Q A DR++
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 354 DIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTI 413
+ V+E +R +A + RVA D +V G I V+V RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGF 470
+E P+ +D+ L FG G C+G L L+V+ + L + +
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
Query: 471 EWKLP 475
+P
Sbjct: 380 RLAVP 384
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 298 EHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVS 357
E L++ LL+AG DT+ + A+ L + P+ + D ++ R+ + E S
Sbjct: 239 EEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARL--RADPSLARNAFEEAVRFES 296
Query: 358 LPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKP 417
+Q + T R D ++AG I + +V++ + + RDP W+ P
Sbjct: 297 --PVQTFFRTTTR---------------DVELAGATIGEGEKVLMFLGSANRDPRRWDDP 339
Query: 418 NEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGY---GLGLKVVQSTLANLLHGFEWKL 474
+ + R GH + FGSG MC+G L +VV + LA + E
Sbjct: 340 DRYDITR------KTSGH----VGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAG 389
Query: 475 P 475
P
Sbjct: 390 P 390
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 294 KLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEK 353
+++RE + + LL AG +T+A ++ LL PE Q A DR++
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 354 DIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTI 413
+ V+E +R +A + RVA D +V G I V+V RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGF 470
+E P+ +D+ L FG G C+G L L+V+ + L + +
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
Query: 471 EWKLP 475
+P
Sbjct: 380 RLAVP 384
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 35/189 (18%)
Query: 292 EVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPE--TIQKATEELDRAIGRDRW 349
E L+ + +L LLTAG +T+A + + LL PE T+ KA GR
Sbjct: 227 EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP------GRTPM 280
Query: 350 VEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGR 409
V+E +R +A + R+A ED ++ G I V+V++ +
Sbjct: 281 A--------------VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANW 326
Query: 410 DPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANL 466
DP +++ P ER + H L FG G C+G L L++V TL
Sbjct: 327 DPAVFKDPAVLDVER------GARHH----LAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
Query: 467 LHGFEWKLP 475
+ +P
Sbjct: 377 IPSLRLAVP 385
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 288 DPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRD 347
D ++ +++R + L+Q +T G A W M LL PE ++ EE+ G+
Sbjct: 246 DEGIDAEMQRRAM--LLQLWVTQGNAGPA--AFWVMGYLLTHPEALRAVREEIQG--GKH 299
Query: 348 RWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVA-----GYDILKNTRVMV 402
+EE+ + P +++ ET+RL A L R +D K+ Y + + R+ V
Sbjct: 300 LRLEERQ-KNTPVFDSVLWETLRL--TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCV 356
Query: 403 NVWAIGR-DPTIWEKPNEFRPERFIGKEIDVKGHDFQ--------LLPFGSGRRMCIGYG 453
+ + DP I ++P F+ +RF+ + K F+ +P+G+ +C G
Sbjct: 357 FPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRH 416
Query: 454 LGLKVVQSTLANLLHGFEWKL 474
+ ++ + +L F+ +L
Sbjct: 417 FAVHAIKELVFTILTRFDVEL 437
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 28/173 (16%)
Query: 298 EHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVS 357
E ++ ++ AG D + + + +L+ PE I + A
Sbjct: 224 EELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSA-------------- 269
Query: 358 LPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKP 417
Q V E +R V PR+ARED +AG +I K V+ ++ A RDP + P
Sbjct: 270 ----QRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPAL--AP 323
Query: 418 NEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
+ R +DV + FG G C+G L +++ L F
Sbjct: 324 DVDR--------LDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 33/218 (15%)
Query: 254 KFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTD 313
+ YE +LD+ A +++ DM +L+ DD +L E ++ + +++AG +
Sbjct: 190 RLYE-VLDQLIAAKRATPG---DDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYE 245
Query: 314 TSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
T+ ++ A+ LL P+ + + G W + +V+ET+R P
Sbjct: 246 TTVNVIDQAVHTLLTRPDQLALVRK------GEVTWAD------------VVEETLRHEP 287
Query: 374 VAPLLAPRVAREDCKVA-GYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDV 432
L R A D + G I + ++ + A R P E + F R V
Sbjct: 288 AVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT------V 341
Query: 433 KGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
K H L FG G C+G L V L +L F
Sbjct: 342 KEH----LAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIG--RDPTIWEKPN 418
+ AIV+E +R P P + R + +VAG I + VMVN W + RD + P+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 330
Query: 419 EFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDM 478
F P R G L FG G C+G L + L ++ F +L D
Sbjct: 331 RFDPSRKSGGAAQ--------LSFGHGVHFCLGAPLARLENRVALEEIIARF-GRLTVDR 381
Query: 479 KNEDLNMEDRFGLTMSRKVPLVVVPSKPR 507
+E L ++ L +R +P V+ S PR
Sbjct: 382 DDERLRHFEQIVLG-TRHLP-VLAGSSPR 408
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIG--RDPTIWEKPN 418
+ AIV+E +R P P + R + +VAG I + VMVN W + RD + P+
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 350
Query: 419 EFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPGDM 478
F P R G L FG G C+G L + L ++ F +L D
Sbjct: 351 RFDPSRKSGGAAQ--------LSFGHGVHFCLGAPLARLENRVALEEIIARF-GRLTVDR 401
Query: 479 KNEDLNMEDRFGLTMSRKVPLVVVPSKPR 507
+E L ++ L +R +P V+ S PR
Sbjct: 402 DDERLRHFEQIVLG-TRHLP-VLAGSSPR 428
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 94/261 (36%), Gaps = 71/261 (27%)
Query: 232 WLASFDLQGHV--KRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDP 289
W +F V + M++ +++ + D++D RRK D D+V L+ D
Sbjct: 184 WSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDR---RRKEPTD----DLVSALVQARDQ- 235
Query: 290 SLEVKLEREHIKALIQDLLTAGTDTSAINVE----------WAMSELLKSPETIQKATEE 339
+ L + + L LL AG +++ + +LL PE I A EE
Sbjct: 236 --QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEE 293
Query: 340 LDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPL----LAPRVAREDCKVAGYDIL 395
L R WV PL APR A ED + G I
Sbjct: 294 LTR------WV-------------------------PLGVGTAAPRYAVEDVTLRGVTIR 322
Query: 396 KNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG 455
V+ + A RD + P+ R IDV Q L FG G C+G L
Sbjct: 323 AGEPVLASTGAANRDQAQF--PDADR--------IDVDRTPNQHLGFGHGVHHCLGAPLA 372
Query: 456 LKVVQSTLANLLHGFEWKLPG 476
+Q L LL +LPG
Sbjct: 373 RVELQVALEVLLQ----RLPG 389
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 29/149 (19%)
Query: 303 LIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDIVSLPYLQ 362
L++ LL+AG DT+ + A+ L + P +Q+ D + R+ + E S +Q
Sbjct: 242 LVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRS--DPTLARNAFEEAVRFES--PVQ 297
Query: 363 AIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRP 422
+ T R + ++ G I + +V++ + + RDP W P+ +
Sbjct: 298 TFFRTTTR---------------EVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDI 342
Query: 423 ERFIGKEIDVKGHDFQLLPFGSGRRMCIG 451
R GH + FGSG MC+G
Sbjct: 343 TR------KTSGH----VGFGSGVHMCVG 361
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 94/257 (36%), Gaps = 63/257 (24%)
Query: 232 WLASFDLQGHV--KRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDP 289
W +F V + M++ +++ + D++D RRK D D+V L+ D
Sbjct: 184 WSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDR---RRKEPTD----DLVSALVQARDQ- 235
Query: 290 SLEVKLEREHIKALIQDLLTAGTDTSAINVE----------WAMSELLKSPETIQKATEE 339
+ L + + L LL AG +++ + +LL PE I A EE
Sbjct: 236 --QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEE 293
Query: 340 LDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTR 399
L RW V L A+ PR A ED + G I
Sbjct: 294 L------TRW------VPLGVGTAV---------------PRYAVEDVTLRGVTIRAGEP 326
Query: 400 VMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVV 459
V+ + A RD + P+ R IDV Q L FG G C+G L +
Sbjct: 327 VLASTGAANRDQAQF--PDADR--------IDVDRTPNQHLGFGHGVHHCLGAPLARVEL 376
Query: 460 QSTLANLLHGFEWKLPG 476
Q L LL +LPG
Sbjct: 377 QVALEVLLQ----RLPG 389
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 95/258 (36%), Gaps = 65/258 (25%)
Query: 232 WLASFDLQGHV--KRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDP 289
W +F V + M++ +++ + D++D RRK D D+V L+ D
Sbjct: 184 WSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDR---RRKEPTD----DLVSALVQARDQ- 235
Query: 290 SLEVKLEREHIKALIQDLLTAGTDTSAINVEWAM----------SELLKSPETIQKATEE 339
+ L + + L LL AG +++ + + +LL PE I A EE
Sbjct: 236 --QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEE 293
Query: 340 LDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLA-PRVAREDCKVAGYDILKNT 398
L R WV P+ A PR A ED + G I
Sbjct: 294 LTR------WV----------------------PLGVGTAFPRYAVEDVTLRGVTIRAGE 325
Query: 399 RVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKV 458
V+ + A RD + P+ R IDV Q L FG G C+G L
Sbjct: 326 PVLASTGAANRDQAQF--PDADR--------IDVDRTPNQHLGFGHGVHHCLGAPLARVE 375
Query: 459 VQSTLANLLHGFEWKLPG 476
+Q L LL +LPG
Sbjct: 376 LQVALEVLLQ----RLPG 389
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 275 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 276 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 335
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 336 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H + L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 275 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 49/245 (20%)
Query: 242 VKRMKDVSKKLDKFYED------ILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKL 295
++R D+S+ L D LD AR+++ D G+ M+ V H D+ +
Sbjct: 179 IRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMI-VRDH-GDN------V 230
Query: 296 EREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKDI 355
E +K L L+ G +T A + + + LL +P I+ E ++A
Sbjct: 231 TDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKA------------ 278
Query: 356 VSLPYLQAIVKETMR-LHPV-APLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTI 413
+ +V E +R L PV AP PR+A +D + G I V+ ++ RD +
Sbjct: 279 ------ERVVNELVRYLSPVQAP--NPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEAL 330
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLANLLHGF 470
P+ R ++ FG G C+G L L++ TL G
Sbjct: 331 TPDPDVLDANRAAVSDVG----------FGHGIHYCVGAALARSMLRMAYQTLWRRFPGL 380
Query: 471 EWKLP 475
+P
Sbjct: 381 RLAVP 385
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 361 LQAIVKETMR-LHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
L IV+E +R PV + R A D ++ G I +M+N A DP + +P +
Sbjct: 322 LPGIVEEAIRWTTPVQHFM--RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG 455
F P R + L FG+G C+G L
Sbjct: 380 FDPTRPANRH----------LAFGAGSHQCLGLHLA 405
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 275 FVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2R6A|A Chain A, Crystal Form Bh1
pdb|2R6A|B Chain B, Crystal Form Bh1
pdb|2R6E|A Chain A, Crystal Form B2
pdb|2R6E|B Chain B, Crystal Form B2
pdb|2R6C|A Chain A, Crystal Form Bh2
pdb|2R6C|B Chain B, Crystal Form Bh2
pdb|2R6C|C Chain C, Crystal Form Bh2
pdb|2R6C|D Chain D, Crystal Form Bh2
pdb|2R6C|E Chain E, Crystal Form Bh2
pdb|2R6C|F Chain F, Crystal Form Bh2
pdb|2R6D|A Chain A, Crystal Form B1
pdb|2R6D|B Chain B, Crystal Form B1
pdb|2R6D|C Chain C, Crystal Form B1
pdb|2R6D|D Chain D, Crystal Form B1
pdb|2R6D|E Chain E, Crystal Form B1
pdb|2R6D|F Chain F, Crystal Form B1
pdb|4ESV|A Chain A, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|B Chain B, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|C Chain C, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|D Chain D, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|E Chain E, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|F Chain F, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|G Chain G, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|H Chain H, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|I Chain I, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|J Chain J, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|K Chain K, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|L Chain L, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
Length = 454
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 170 STYVHLKDHLYTLNHTSICRMVLGKRYTDKAEKN---TVTPK-DFTEMLEELFLLNGILD 225
++ + + + Y H I +L R D+ E TVT + +E LEE+ ++ + +
Sbjct: 34 ASEILIPEDFYRAAHQKIFHAML--RVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSE 91
Query: 226 IGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHL 285
+ D++P A+ + + K V ++L + I + Y R D +DVLL
Sbjct: 92 LADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTR---------EDEIDVLLDE 142
Query: 286 ADDPSLEVKLEREHIKAL--IQDLLTAGTDT 314
AD +EV +R+H A I+D+L D
Sbjct: 143 ADRKIMEVS-QRKHSGAFKNIKDILVQTYDN 172
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 275 FVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 363 AIVKETMRLHPVAPLLA-PRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFR 421
A V+E MR P P+ A R A ED ++ +DI + +RV+ + + RDP + P+
Sbjct: 289 AAVEELMRYDP--PVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 422 PERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R +++ FG G C+G L + L LL G
Sbjct: 347 VHRAAERQVG----------FGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 364 IVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E R H L R A+ED + + N ++ + + RD ++E P+EF
Sbjct: 274 FVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
R K L FG G CI L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 26/163 (15%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKD 354
L RE + LL AG +T A + W+ L P+ W +++
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPD-----------------W-QKRV 247
Query: 355 IVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDIL-KNTRVMVNVWAIGRDPTI 413
S A +E +RL+P A +L R+ E + G D L + T ++++ + R
Sbjct: 248 AESEEAALAAFQEALRLYPPAWILTRRL--ERPLLLGEDRLPQGTTLVLSPYVTQR--LY 303
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGL 456
+ + F+PERF+ + G F PFG G+R+C+G L
Sbjct: 304 FPEGEAFQPERFLAERGTPSGRYF---PFGLGQRLCLGRDFAL 343
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 361 LQAIVKETMR-LHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNE 419
+ +V+E +R P +L RV D + G D+ T V+ + A RDP ++ P+
Sbjct: 287 VDTVVEEVLRWTSPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 420 FRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG---LKVVQSTLA 464
F P R + I FG G C+G L L VV LA
Sbjct: 345 FLPGRKPNRHI----------TFGHGMHHCLGSALARIELSVVLRVLA 382
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 337 TEELDRAIGR--DRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKV----- 389
EE+ AI D V + I +P +++V E++R+ P P P+ +
Sbjct: 304 AEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVP---PQYGKAKSNFTIESH 360
Query: 390 -AGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIG 427
A +++ K + +DP ++++P E+ P+RF+G
Sbjct: 361 DATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVG 399
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 321 WAMSELLKSPETIQKATEELD-------RAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
W + LLK+PE + EL+ + + + + +K + S P L +++ E++RL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 330
Query: 374 VAPLLAPRV----AREDCKVAGYDILKNTRVMVNVW-AIGRDPTIWEKPNEFRPERFIGK 428
AP + V A +++ + R+++ + + RDP I+ P F+ RF+
Sbjct: 331 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 390
Query: 429 EIDVKGHDFQ--------LLPFGSGRRMCIGYGLGLKVVQS 461
+ K ++ +P+G+G C+G + ++
Sbjct: 391 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQ 431
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 321 WAMSELLKSPETIQKATEELD-------RAIGRDRWVEEKDIVSLPYLQAIVKETMRLHP 373
W + LLK+PE + EL+ + + + + +K + S P L +++ E++RL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 374 VAPLLAPRV----AREDCKVAGYDILKNTRVMVNVW-AIGRDPTIWEKPNEFRPERFIGK 428
AP + V A +++ + R+++ + + RDP I+ P F+ RF+
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 429 EIDVKGHDFQ--------LLPFGSGRRMCIGYGLGLKVVQS 461
+ K ++ +P+G+G C+G + ++
Sbjct: 403 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQ 443
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 295 LEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAIGRDRWVEEKD 354
L RE + LL AG +T A + W+ L P+ W +++
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPD-----------------W-QKRV 247
Query: 355 IVSLPYLQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILK-NTRVMVNVWAIGRDPTI 413
S A +E +RL+P A +L R+ E + G D L T ++++ + R
Sbjct: 248 AESEEAALAAFQEALRLYPPAWILTRRL--ERPLLLGEDRLPPGTTLVLSPYVTQR--LH 303
Query: 414 WEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGL 456
+ FRPERF+ + G F PFG G+R+C+G L
Sbjct: 304 FPDGEAFRPERFLEERGTPSGRYF---PFGLGQRLCLGRDFAL 343
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 362 QAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWA----IGRDPTIWEKP 417
+++V E +R P R A++D + +D + ++ RDP I+++
Sbjct: 348 KSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRA 406
Query: 418 NEFRPERFIGKE 429
+EF PERF+G+E
Sbjct: 407 DEFVPERFVGEE 418
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 362 QAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWA----IGRDPTIWEKP 417
+++V E +R P R A++D + +D + ++ RDP I+++
Sbjct: 348 KSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRA 406
Query: 418 NEFRPERFIGKE 429
+EF PERF+G+E
Sbjct: 407 DEFVPERFVGEE 418
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V E +R+ VA + RVA ED +++G + + V+ + DP ++ P
Sbjct: 282 MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDP--- 338
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLL 467
+ +D D + FG G C+G L ++ L LL
Sbjct: 339 -------ERVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLL 378
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 365 VKETMRLHPVAPLLAP-RVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPE 423
V+E +R P P++ RV +E K+ I + V V + + RD +++ P+ F P+
Sbjct: 244 VEEALRFSP--PVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 424 RFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG 455
R L FGSG +C+G L
Sbjct: 302 RTPNPH----------LSFGSGIHLCLGAPLA 323
>pdb|2VYE|A Chain A, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYE|B Chain B, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYF|A Chain A, Crystal Structure Of The Dnac
pdb|2VYF|B Chain B, Crystal Structure Of The Dnac
Length = 454
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 177 DHLYTLNHTSICRMVLGKRYTDKAEKN---TVTPK-DFTEMLEELFLLNGILDIGDSIPW 232
+ Y H I +L R DK E TVT + E LEE+ ++ + ++ DS+P
Sbjct: 41 EDFYRAAHQKIFHAML--RVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPT 98
Query: 233 LASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLE 292
A+ + + K + ++L + I + Y R D +DVLL A+ +E
Sbjct: 99 AANVEYYARIVEEKSLLRRLIRTATSIAQDGYTR---------EDEIDVLLDEAERKIME 149
Query: 293 VKLEREHIKAL--IQDLLTAGTDT 314
V +R+H A I+D+L D
Sbjct: 150 VS-QRKHSGAFKNIKDVLVQTYDN 172
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ + +E +R + APRVA D ++AG DI + ++ A R P
Sbjct: 292 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP--------- 342
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
G D+ + FG G CIG L ++ L ++ F
Sbjct: 343 ------GDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ + +E +R + APRVA D ++AG DI + ++ A R P
Sbjct: 259 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP--------- 309
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGF 470
G D+ + FG G CIG L ++ L ++ F
Sbjct: 310 ------GDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3AFO|A Chain A, Crystal Structure Of Yeast Nadh Kinase Complexed With Nadh
pdb|3AFO|B Chain B, Crystal Structure Of Yeast Nadh Kinase Complexed With Nadh
Length = 388
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 229 SIPWLASFDLQGHVKRMKDV-SKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLAD 287
++ +L+ FD + H K ++V S + + L+ H ++ S H M D+ LH +
Sbjct: 149 TLGFLSPFDFKEHKKVFQEVISSRAKCLHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGN 208
Query: 288 DP---SLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSP 330
P +L++ ++ E + D + T T + + + SP
Sbjct: 209 SPHLTNLDIFIDGEFLTRTTADGVALATPTGSTAYSLSAGGSIVSP 254
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
E+D + + L FG G+ C+G LG + Q + LL K+PG
Sbjct: 326 --------ELD-RPNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG---D 477
E+D + + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 --------ELD-RPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPGVDLA 372
Query: 478 MKNEDLNMEDRFGLTMSRKVPLV 500
+ + L RF L + ++P++
Sbjct: 373 VPIDQLVWRTRFQLRIPERLPVL 395
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 381 RVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLL 440
R+A ED +V G I V V+ A RDP ++ P+ ID+ L
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNPHL 347
Query: 441 PFGSGRRMCIGYGLG---LKVVQSTLANLLHGFEWKLPGD 477
+G+G C G L +++ TL L G +P +
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE 387
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 381 RVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLL 440
R+A ED +V G I V V+ A RDP ++ P+ ID+ L
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNPHL 347
Query: 441 PFGSGRRMCIGYGLG---LKVVQSTLANLLHGFEWKLPGD 477
+G+G C G L +++ TL L G +P +
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE 387
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 266 IPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
E+D + + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 --------ELD-RPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 31/173 (17%)
Query: 280 DVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEE 339
D++ LA P+ E++ ++ L+ G DT+ ++ + L K+P+ K
Sbjct: 236 DLISMLAHSPATRNMTPEEYLGNVLL-LIVGGNDTTRNSMTGGVLALHKNPDQFAKLK-- 292
Query: 340 LDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLH-PVAPLLAPRVAREDCKVAGYDILKNT 398
+ ++ +V E +R P+A + R A D ++ G I K
Sbjct: 293 ----------------ANPALVETMVPEIIRWQTPLAHMR--RTAIADSELGGKTIRKGD 334
Query: 399 RVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIG 451
+V++ ++ RD + ++P EF +R + Q L FG G C+G
Sbjct: 335 KVVMWYYSGNRDDEVIDRPEEFIIDRPRPR---------QHLSFGFGIHRCVG 378
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 39/212 (18%)
Query: 246 KDVSKKLDKFYEDILDEHYARRKSIKDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQ 305
++V L + + D A+R + D D+ L+ +++ L I + +Q
Sbjct: 185 EEVVATLTELASIMTDTVAAKRAAPGD----DLTSALIQASENGD---HLTDAEIVSTLQ 237
Query: 306 DLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI---GRDRWVEEKDIVSLPYLQ 362
++ AG +T+ + A+ L PE RA+ G W
Sbjct: 238 LMVAAGHETTISLIVNAVVNLSTHPE---------QRALVLSGEAEW------------S 276
Query: 363 AIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRP 422
A+V+ET+R + R A ED V I ++V+ A+GRD E+ +
Sbjct: 277 AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPTA 332
Query: 423 ERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGL 454
+RF H + FG G +C G L
Sbjct: 333 DRFDLTRTSGNRH----ISFGHGPHVCPGAAL 360
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 265 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 324
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
E+D + + L FG G+ C G LG + Q + LL K+PG
Sbjct: 325 --------ELD-RPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 367
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
E+D + + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 --------ELD-RPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
E+D + + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 --------ELD-RPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 361 LQAIVKETMRLHPVAPLLAPRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEF 420
+ A V+E +R++ PR+A D +V + K V+V + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 421 RPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLGLKVVQSTLANLLHGFEWKLPG 476
E+D + + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 --------ELD-RPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 360 YLQAIVKETMRLHPVAPLL-APRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPN 418
YL+AI +E +R P P++ R +E K+ I + V V + + RD ++
Sbjct: 240 YLKAI-EEALRYSP--PVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 419 EFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG 455
+F P+R + H L FGSG +C+G L
Sbjct: 297 KFIPDR------NPNPH----LSFGSGIHLCLGAPLA 323
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 360 YLQAIVKETMRLHPVAPLL-APRVAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPN 418
YL+AI +E +R P P++ R +E K+ I + V V + + RD ++
Sbjct: 240 YLKAI-EEALRYSP--PVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 419 EFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIGYGLG 455
+F P+R + H L FGSG +C+G L
Sbjct: 297 KFIPDR------NPNPH----LSFGSGIHLCLGAPLA 323
>pdb|3BKK|A Chain A, Tesis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaf
pdb|3BKL|A Chain A, Testis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaw
pdb|3L3N|A Chain A, Testis Ace Co-Crystal Structure With Novel Inhibitor Lisw
Length = 591
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 59 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 118
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
+ L M ++Y D KA + + PK + E++ + LNG
Sbjct: 119 QGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 177
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 178 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 228
>pdb|2IUL|A Chain A, Human Tace G13 Mutant
Length = 591
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 59 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 118
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
+ L M ++Y D KA + + PK + E++ + LNG
Sbjct: 119 QGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 177
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 178 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 228
>pdb|3LG6|A Chain A, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3LG6|B Chain B, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3LG6|C Chain C, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3LG6|D Chain D, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3N5O|A Chain A, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis Bound To Glutathione
pdb|3N5O|B Chain B, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis Bound To Glutathione
Length = 235
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 353 KDIVSLPYLQAIVKETMR--LHPVAPLLAPRVAREDCKVAGYDI--LKNTRVMVNVWAIG 408
+ + +L YL+ + R L P++ +A R C + D+ + N ++ V A+
Sbjct: 84 QSLAALEYLEEALPTNARPLLPPISNPVARAHVRTICNIIACDVQPVTNLKIQKKVKALD 143
Query: 409 RDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIG 451
DPT+W + + + F E +LL +G R C+G
Sbjct: 144 GDPTVWSR--DLATQGFGAVE--------KLLELSAG-RFCVG 175
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|2OC2|A Chain A, Structure Of Testis Ace With Rxpa380
Length = 591
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 59 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 118
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
L M ++Y D KA + + PK + E++ + LNG
Sbjct: 119 NGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 177
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 178 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 228
>pdb|2IUX|A Chain A, Human Tace Mutant G1234
Length = 591
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 59 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 118
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
L M ++Y D KA + + PK + E++ + LNG
Sbjct: 119 NGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 177
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 178 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 228
>pdb|2XY9|A Chain A, Human Angiotensin Converting Enzyme In Complex With
Phosphinic Tripeptide
Length = 585
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 56 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 115
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
L M ++Y D KA + + PK + E++ + LNG
Sbjct: 116 NGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 174
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 175 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 225
>pdb|1O8A|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
(Native).
pdb|1UZF|A Chain A, Complex Of The Anti-Hypertensive Drug Captopril An The
Human Testicular Angiotensin I-Converting Enzyme
pdb|4APH|A Chain A, Human Angiotensin-Converting Enzyme In Complex With
Angiotensin-Ii
pdb|4APJ|A Chain A, Human Angiotensin-Converting Enzyme In Complex With Bppb
pdb|1O86|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
In Complex With Lisinopril.
pdb|1UZE|A Chain A, Complex Of The Anti-hypertensive Drug Enalaprilat And The
Human Testicular Angiotensin I-converting Enzyme
Length = 589
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 59 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 118
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
L M ++Y D KA + + PK + E++ + LNG
Sbjct: 119 NGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 177
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 178 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 228
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|2YDM|A Chain A, Structural Characterization Of Angiotensin-I Converting
Enzyme In Complex With A Selenium Analogue Of Captopril
Length = 589
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 129 YWRQARKICLMELLGT------KRLDQFE-----YMRVEERNAFLF--ELFKSVSTYVHL 175
Y QARK + +L T K++ E +EE N L E SV+T H
Sbjct: 59 YGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHP 118
Query: 176 KDHLYTLNHTSICRMVLGKRYTD----------KAEKNTVT--PKDFTEMLEELFLLNGI 223
L M ++Y D KA + + PK + E++ + LNG
Sbjct: 119 NGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPK-YVELINQAARLNGY 177
Query: 224 LDIGDSIPWLASFDLQGHVKRMKDVSKKLDKFYEDILDEHYARRKSIKDYGVHDM 278
+D GDS W + ++ + ++ + ++L Y ++ Y RR + YG +
Sbjct: 178 VDAGDS--WRSMYETPSLEQDLERLFQELQPLYLNL--HAYVRRALHRHYGAQHI 228
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 38/130 (29%)
Query: 323 MSELLKS-PETIQKATEELDRAIGRDRWVEEKDIVSLPYLQAIVKETMRLHPVAPLLAPR 381
++E L+S PE +A +EL R W+ ++ V L R
Sbjct: 263 LAERLRSEPEIRPRAIDELLR------WIPHRNAVGLS---------------------R 295
Query: 382 VAREDCKVAGYDILKNTRVMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLP 441
+A ED ++ G I V V+ A RDP ++ P+ ER +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS---------- 345
Query: 442 FGSGRRMCIG 451
FG G C G
Sbjct: 346 FGFGPHYCPG 355
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 317 INVEWAMSELLKSPETIQKATEELDRAIGR------DRWVEEKDIVSLPYLQAIVKETMR 370
IN EW S ++ E I ATEE+ + + D+ VE D V L + VKE
Sbjct: 12 INGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQA 71
Query: 371 L 371
L
Sbjct: 72 L 72
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 400 VMVNVWAIGRDPTIWEKPNEFRPERFIGKEIDVKGHDFQLLPFGSGRRMCIG 451
V+V A RDP +++P++F D++ + FG+G R C+G
Sbjct: 304 VVVLAGAANRDPRRYDRPDDF----------DIERDPVPSMSFGAGMRYCLG 345
>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex
Length = 308
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 271 KDYGVHDMVDVLLHLADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSP 330
+ +G + L L + SLE K ERE +++ I + G+D W + KSP
Sbjct: 13 RTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSP 72
Query: 331 ETIQKATEELDRAIGRDRWV 350
+ + + DRWV
Sbjct: 73 QELLCGASLIS-----DRWV 87
>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor
At 1.8a
pdb|1NT1|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor
pdb|1TA2|A Chain A, Crystal Structure Of Thrombin In Complex With Compound 1
pdb|1TA6|A Chain A, Crystal Structure Of Thrombin In Complex With Compound 14b
pdb|1SL3|A Chain A, Crystal Structue Of Thrombin In Complex With A Potent P1
Heterocycle- Aryl Based Inhibitor
pdb|1Z71|A Chain A, Thrombin And P2 Pyridine N-oxide Inhibitor Complex
Structure
pdb|1ZRB|A Chain A, Thrombin In Complex With An Azafluorenyl Inhibitor 23b
pdb|1ZGI|A Chain A, Thrombin In Complex With An Oxazolopyridine Inhibitor 21
pdb|1ZGV|A Chain A, Thrombin In Complex With An Oxazolopyridine Inhibitor 2
pdb|3C1K|A Chain A, Crystal Structure Of Thrombin In Complex With Inhibitor 15
Length = 287
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + +
Sbjct: 7 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS--- 63
Query: 345 GRDRWV 350
DRWV
Sbjct: 64 --DRWV 67
>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin
Inhibitors And Their Crystal Structures
pdb|1EOL|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin
Inhibitors And Their Crystal Structures
Length = 289
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + +
Sbjct: 10 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS--- 66
Query: 345 GRDRWV 350
DRWV
Sbjct: 67 --DRWV 70
>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel
Bicyclic Lactam Inhibitor
Length = 305
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + ++
Sbjct: 14 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGA-----SL 68
Query: 345 GRDRWV 350
DRWV
Sbjct: 69 ISDRWV 74
>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective
Non-Electophilic Inhibitors Having Cyclohexyl Moieties
At P1
Length = 288
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + +
Sbjct: 8 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS--- 64
Query: 345 GRDRWV 350
DRWV
Sbjct: 65 --DRWV 68
>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And
Ppack- Thrombin: Changes Accompanying Activation And
Exosite Binding To Thrombin
pdb|1DOJ|A Chain A, Crystal Structure Of Human Alpha-ThrombinRwj-51438 Complex
At 1.7 A
pdb|1XM1|A Chain A, Nonbasic Thrombin Inhibitor Complex
Length = 295
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + +
Sbjct: 14 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS--- 70
Query: 345 GRDRWV 350
DRWV
Sbjct: 71 --DRWV 74
>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor
Length = 289
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + ++
Sbjct: 8 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGA-----SL 62
Query: 345 GRDRWV 350
DRWV
Sbjct: 63 ISDRWV 68
>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex
pdb|1NU9|D Chain D, Staphylocoagulase-prethrombin-2 Complex
Length = 291
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + ++
Sbjct: 10 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGA-----SL 64
Query: 345 GRDRWV 350
DRWV
Sbjct: 65 ISDRWV 70
>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective
Non-Electrophilic Inhibitors Having Cyclohexyl Moieties
At P1
pdb|1G37|A Chain A, Crystal Structure Of Human Alpha-thrombin Complexed With
Bch-10556 And Exosite-directed Peptide
Length = 287
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + +
Sbjct: 8 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS--- 64
Query: 345 GRDRWV 350
DRWV
Sbjct: 65 --DRWV 68
>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The
Alternative Form
pdb|3SQH|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The The
Open Form
Length = 290
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + ++
Sbjct: 9 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGA-----SL 63
Query: 345 GRDRWV 350
DRWV
Sbjct: 64 ISDRWV 69
>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of
Thrombin
pdb|1MH0|B Chain B, Crystal Structure Of The Anticoagulant Slow Form Of
Thrombin
Length = 287
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 285 LADDPSLEVKLEREHIKALIQDLLTAGTDTSAINVEWAMSELLKSPETIQKATEELDRAI 344
L + SLE K ERE +++ I + G+D W + KSP+ + +
Sbjct: 8 LFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS--- 64
Query: 345 GRDRWV 350
DRWV
Sbjct: 65 --DRWV 68
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,217,530
Number of Sequences: 62578
Number of extensions: 636990
Number of successful extensions: 2273
Number of sequences better than 100.0: 242
Number of HSP's better than 100.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 1874
Number of HSP's gapped (non-prelim): 274
length of query: 516
length of database: 14,973,337
effective HSP length: 103
effective length of query: 413
effective length of database: 8,527,803
effective search space: 3521982639
effective search space used: 3521982639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)