Query 010177
Match_columns 516
No_of_seqs 154 out of 247
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 21:34:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010177.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010177hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2efla1 a.238.1.4 (A:1-288) Fo 77.7 21 0.0016 31.0 16.3 9 409-417 263-271 (288)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 69.5 9.9 0.00072 30.2 8.5 32 222-253 70-101 (107)
3 d1seta1 a.2.7.1 (A:1-110) Sery 68.4 25 0.0018 27.6 11.7 67 217-289 28-94 (110)
4 d1fxka_ a.2.5.1 (A:) Prefoldin 65.3 29 0.0021 27.2 10.8 30 218-247 9-38 (107)
5 d1fxkc_ a.2.5.1 (C:) Prefoldin 63.8 18 0.0013 29.1 9.3 26 178-203 17-42 (133)
6 d1seta1 a.2.7.1 (A:1-110) Sery 60.1 36 0.0026 26.6 10.8 23 181-203 33-55 (110)
7 d2efka1 a.238.1.4 (A:10-288) C 54.0 64 0.0046 27.6 16.4 9 409-417 254-262 (279)
8 d1qvra2 c.37.1.20 (A:149-535) 51.8 24 0.0017 34.1 9.1 23 164-187 180-202 (387)
9 d2azeb1 e.63.1.2 (B:201-301) T 51.6 11 0.00083 30.2 5.6 32 228-259 5-36 (101)
10 d1qvra2 c.37.1.20 (A:149-535) 48.5 42 0.0031 32.2 10.4 8 294-301 354-361 (387)
11 d2efla1 a.238.1.4 (A:1-288) Fo 46.7 84 0.0061 26.9 14.4 23 181-203 102-124 (288)
12 d2efka1 a.238.1.4 (A:10-288) C 43.0 95 0.0069 26.4 15.2 27 178-204 90-116 (279)
13 d1lrza1 a.2.7.4 (A:245-309) Me 38.4 69 0.005 23.5 9.0 10 242-251 41-50 (65)
14 d1ykhb1 a.252.1.1 (B:2-130) RN 36.5 1E+02 0.0076 25.1 9.8 33 211-243 85-117 (129)
15 d1wu9a1 a.245.1.1 (A:191-249) 35.8 21 0.0016 26.1 4.4 26 178-203 10-35 (59)
16 d1nkpa_ a.38.1.1 (A:) Myc prot 33.4 49 0.0036 24.9 6.5 31 219-249 54-84 (88)
17 d1fxkc_ a.2.5.1 (C:) Prefoldin 32.8 1.1E+02 0.0079 24.1 13.9 30 270-299 99-128 (133)
18 d1ivsa1 a.2.7.3 (A:797-862) Va 31.7 82 0.006 22.4 7.5 22 182-203 3-24 (66)
19 d2azeb1 e.63.1.2 (B:201-301) T 30.0 41 0.003 26.7 5.7 17 243-259 6-22 (101)
20 d2ap3a1 a.24.27.1 (A:12-196) H 26.5 1.2E+02 0.009 22.8 16.1 12 181-192 60-71 (185)
21 d2fupa1 a.47.5.1 (A:1-130) Hyp 26.5 1.4E+02 0.01 23.3 12.2 59 187-247 10-68 (130)
22 d1gqea_ e.38.1.1 (A:) Polypept 25.9 2.6E+02 0.019 26.2 14.4 20 289-308 100-119 (362)
23 d1nkpb_ a.38.1.1 (B:) Max prot 24.6 37 0.0027 25.3 4.2 30 220-249 50-79 (83)
24 d1bjta_ e.11.1.1 (A:) DNA topo 24.4 56 0.0041 34.2 7.1 11 13-23 355-365 (760)
25 d1ez3a_ a.47.2.1 (A:) Syntaxin 24.0 1.4E+02 0.0098 23.3 8.0 71 233-303 5-75 (124)
26 d1nkpa_ a.38.1.1 (A:) Myc prot 21.6 1.2E+02 0.0084 22.6 6.7 30 225-254 53-82 (88)
No 1
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.73 E-value=21 Score=31.01 Aligned_cols=9 Identities=11% Similarity=0.040 Sum_probs=4.4
Q ss_pred HHHHHHHhc
Q 010177 409 KDFAEFANS 417 (516)
Q Consensus 409 ~q~~e~~~~ 417 (516)
.++..|++.
T Consensus 263 ~D~~~fi~~ 271 (288)
T d2efla1 263 NDSQLVIEA 271 (288)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344555553
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=69.51 E-value=9.9 Score=30.16 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 222 IEEEERKLEAAIEETEKQNAEVNAELKELELK 253 (516)
Q Consensus 222 Le~EE~~L~~eL~~LE~e~~~l~~El~~le~e 253 (516)
|++....+..+++.++++...+..++.+++.+
T Consensus 70 l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~ 101 (107)
T d1fxka_ 70 LQEKLETLQLREKTIERQEERVMKKLQEMQVN 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555555555555555443
No 3
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=68.43 E-value=25 Score=27.64 Aligned_cols=67 Identities=10% Similarity=0.138 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 010177 217 KEKLKIEEEERKLEAAIEETEKQNAEVNAELKELELKSKRFKELEERYWQEFNNFQFQLIAHQEERDAISSKI 289 (516)
Q Consensus 217 ~e~~~Le~EE~~L~~eL~~LE~e~~~l~~El~~le~e~~~L~~eE~~~W~e~N~~q~qL~~~~ee~~sl~~q~ 289 (516)
.++.+|.++.+.+..++++|..++.++.+++..+..+. . ...-.+...+.-++..++++...++.++
T Consensus 28 d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~--~----~~l~~~~k~lk~~i~~le~~~~~~~~~l 94 (110)
T d1seta1 28 EALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEE--K----EALIARGKALGEEAKRLEEALREKEARL 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHH--H----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--h----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667888888888899999888888888776543211 0 1123344444444444444444444443
No 4
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=65.26 E-value=29 Score=27.24 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 218 EKLKIEEEERKLEAAIEETEKQNAEVNAEL 247 (516)
Q Consensus 218 e~~~Le~EE~~L~~eL~~LE~e~~~l~~El 247 (516)
+...+..+...+...+..++.+..+...-+
T Consensus 9 ~~q~lq~el~~~~~q~~~le~q~~E~~~vl 38 (107)
T d1fxka_ 9 QFQQLQQQAQAISVQKQTVEMQINETQKAL 38 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444433333
No 5
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=63.82 E-value=18 Score=29.08 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010177 178 SDKLDKEVDDVTRDIEAYEACLQRLE 203 (516)
Q Consensus 178 le~Ld~qle~~~~E~d~Y~~fL~~L~ 203 (516)
++.|+.+++.++.....|....+.|+
T Consensus 17 l~~l~~~i~~l~~~~~e~~~~~~~L~ 42 (133)
T d1fxkc_ 17 VELIQQQMEAVRATISELEILEKTLS 42 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666666666666555553
No 6
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=60.05 E-value=36 Score=26.61 Aligned_cols=23 Identities=17% Similarity=0.447 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 010177 181 LDKEVDDVTRDIEAYEACLQRLE 203 (516)
Q Consensus 181 Ld~qle~~~~E~d~Y~~fL~~L~ 203 (516)
|+.+...+..+.+...+--+.+.
T Consensus 33 ld~~rr~l~~~~e~l~~~rN~~s 55 (110)
T d1seta1 33 LDREVQELKKRLQEVQTERNQVA 55 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555554444444433
No 7
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.01 E-value=64 Score=27.61 Aligned_cols=9 Identities=11% Similarity=0.003 Sum_probs=4.6
Q ss_pred HHHHHHHhc
Q 010177 409 KDFAEFANS 417 (516)
Q Consensus 409 ~q~~e~~~~ 417 (516)
.++..|++.
T Consensus 254 ~D~~~f~~~ 262 (279)
T d2efka1 254 NDSHVLIEL 262 (279)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 345556653
No 8
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=51.84 E-value=24 Score=34.07 Aligned_cols=23 Identities=17% Similarity=0.294 Sum_probs=14.7
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHH
Q 010177 164 QVEQPLCLECMRVLSDKLDKEVDD 187 (516)
Q Consensus 164 ~IDhPLC~eC~d~Lle~Ld~qle~ 187 (516)
.|+-|-=.++... +..+...|+.
T Consensus 180 ~v~ep~~~~~~~i-l~~~~~~~e~ 202 (387)
T d1qvra2 180 YVDEPTVEETISI-LRGLKEKYEV 202 (387)
T ss_dssp EECCCCHHHHHHH-HHHHHHHHHH
T ss_pred cCCCCcHHHHHHH-HHHHHHHHHh
Confidence 5677766666665 4457766665
No 9
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.60 E-value=11 Score=30.18 Aligned_cols=32 Identities=6% Similarity=0.162 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 228 KLEAAIEETEKQNAEVNAELKELELKSKRFKE 259 (516)
Q Consensus 228 ~L~~eL~~LE~e~~~l~~El~~le~e~~~L~~ 259 (516)
.|.+||+.|+.+..+|++.|..++.++..+.+
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~lte 36 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 36 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 35556666666666666666666655555543
No 10
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=48.53 E-value=42 Score=32.15 Aligned_cols=8 Identities=38% Similarity=0.480 Sum_probs=3.3
Q ss_pred HHHHHHhh
Q 010177 294 AHLELLKR 301 (516)
Q Consensus 294 ~qLdkLrk 301 (516)
.+++++.+
T Consensus 354 ~el~~l~~ 361 (387)
T d1qvra2 354 AEVEALSE 361 (387)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444433
No 11
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.70 E-value=84 Score=26.86 Aligned_cols=23 Identities=9% Similarity=0.114 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 010177 181 LDKEVDDVTRDIEAYEACLQRLE 203 (516)
Q Consensus 181 Ld~qle~~~~E~d~Y~~fL~~L~ 203 (516)
|..-..+.++.++.+.....++.
T Consensus 102 l~~~~~~~~~~~K~~~~~~~k~~ 124 (288)
T d2efla1 102 LARYVQELKQERKSNFHDGRKAQ 124 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444443
No 12
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.98 E-value=95 Score=26.41 Aligned_cols=27 Identities=11% Similarity=0.007 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010177 178 SDKLDKEVDDVTRDIEAYEACLQRLEG 204 (516)
Q Consensus 178 le~Ld~qle~~~~E~d~Y~~fL~~L~~ 204 (516)
++.|..-+.+.++.++.+....+++.+
T Consensus 90 ~~~l~~~~~~~~~~~k~~~~~~~~~~k 116 (279)
T d2efka1 90 CLELTKYSQEMKQERKMHFQEGRRAQQ 116 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445555555555555543
No 13
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=38.39 E-value=69 Score=23.50 Aligned_cols=10 Identities=20% Similarity=0.335 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 010177 242 EVNAELKELE 251 (516)
Q Consensus 242 ~l~~El~~le 251 (516)
++.+++...+
T Consensus 41 el~~Q~~s~~ 50 (65)
T d1lrza1 41 NLQQQLDANE 50 (65)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 14
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.51 E-value=1e+02 Score=25.06 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 211 SEADFLKEKLKIEEEERKLEAAIEETEKQNAEV 243 (516)
Q Consensus 211 see~l~~e~~~Le~EE~~L~~eL~~LE~e~~~l 243 (516)
++++-.+.+.+|++|-....+++++.-++.+++
T Consensus 85 see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~l 117 (129)
T d1ykhb1 85 SAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKL 117 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455555555555555554444444333
No 15
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.77 E-value=21 Score=26.08 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010177 178 SDKLDKEVDDVTRDIEAYEACLQRLE 203 (516)
Q Consensus 178 le~Ld~qle~~~~E~d~Y~~fL~~L~ 203 (516)
+..|+..++.+++|||-|-.-|+.++
T Consensus 10 i~elk~~v~~lEkERdFYF~KLRdIE 35 (59)
T d1wu9a1 10 VNVLKLTVEDLEKERDFYFGKLRNIE 35 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56688899999999999999998886
No 16
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.42 E-value=49 Score=24.85 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 219 KLKIEEEERKLEAAIEETEKQNAEVNAELKE 249 (516)
Q Consensus 219 ~~~Le~EE~~L~~eL~~LE~e~~~l~~El~~ 249 (516)
+..|+++...|..+++.+.++.+.+.+++..
T Consensus 54 I~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 54 ILSVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556656666655555555555555443
No 17
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=32.78 E-value=1.1e+02 Score=24.10 Aligned_cols=30 Identities=20% Similarity=0.130 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 270 NFQFQLIAHQEERDAISSKIEVSQAHLELL 299 (516)
Q Consensus 270 ~~q~qL~~~~ee~~sl~~q~~~a~~qLdkL 299 (516)
.++..+..+.++...+..++......+++|
T Consensus 99 ~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l 128 (133)
T d1fxkc_ 99 ELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555555555555555555544
No 18
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=31.69 E-value=82 Score=22.38 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 010177 182 DKEVDDVTRDIEAYEACLQRLE 203 (516)
Q Consensus 182 d~qle~~~~E~d~Y~~fL~~L~ 203 (516)
+.+...++++.+.+...+.+++
T Consensus 3 ~~E~~RL~K~l~kl~~~i~~~~ 24 (66)
T d1ivsa1 3 EEWRRRQEKRLKELLALAERSQ 24 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555554444443
No 19
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.01 E-value=41 Score=26.68 Aligned_cols=17 Identities=12% Similarity=0.438 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010177 243 VNAELKELELKSKRFKE 259 (516)
Q Consensus 243 l~~El~~le~e~~~L~~ 259 (516)
|.+|++.|+.+..+|++
T Consensus 6 L~~El~~L~~~E~~LD~ 22 (101)
T d2azeb1 6 LTQDLRQLQESEQQLDH 22 (101)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444443
No 20
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=26.52 E-value=1.2e+02 Score=22.79 Aligned_cols=12 Identities=33% Similarity=0.471 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHH
Q 010177 181 LDKEVDDVTRDI 192 (516)
Q Consensus 181 Ld~qle~~~~E~ 192 (516)
+..+++......
T Consensus 60 ~~~~~~~~~~~~ 71 (185)
T d2ap3a1 60 LIKNADDRLKEF 71 (185)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 21
>d2fupa1 a.47.5.1 (A:1-130) Hypothetical protein PA3352 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.47 E-value=1.4e+02 Score=23.28 Aligned_cols=59 Identities=20% Similarity=0.219 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 187 DVTRDIEAYEACLQRLEGEARDVLSEADFLKEKLKIEEEERKLEAAIEETEKQNAEVNAEL 247 (516)
Q Consensus 187 ~~~~E~d~Y~~fL~~L~~~~~~~~see~l~~e~~~Le~EE~~L~~eL~~LE~e~~~l~~El 247 (516)
.+..|+..|..++.-++.+.. .+...| .+++..+-.++..+..++..++..+.++-.++
T Consensus 10 ~L~~e~~~~~~L~~LL~~e~~-aL~~~d-~~~Le~l~~~k~~ll~~l~~~~~~R~~~l~~~ 68 (130)
T d2fupa1 10 LFAEDIGHANQLLQLVDEEFQ-ALERRE-LPVLQQLLGAKQPLMQQLERNGRARAEILREA 68 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344577788888887765532 000001 13556677788888888888888887765543
No 22
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=25.85 E-value=2.6e+02 Score=26.23 Aligned_cols=20 Identities=10% Similarity=0.250 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhhcccCCCc
Q 010177 289 IEVSQAHLELLKRTNVLNDA 308 (516)
Q Consensus 289 ~~~a~~qLdkLrktNV~Nd~ 308 (516)
+......++.|...-++++-
T Consensus 100 l~~l~~~l~~le~~ll~~~~ 119 (362)
T d1gqea_ 100 LDALEEKLAQLEFRRMFSGE 119 (362)
T ss_dssp HHHHHHHHHHHGGGGGCCST
T ss_pred HHHHhhhhhHHHHhhcccCc
Confidence 34444556677766666654
No 23
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.56 E-value=37 Score=25.32 Aligned_cols=30 Identities=13% Similarity=0.318 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 220 LKIEEEERKLEAAIEETEKQNAEVNAELKE 249 (516)
Q Consensus 220 ~~Le~EE~~L~~eL~~LE~e~~~l~~El~~ 249 (516)
..|..+...|.++++.+.++.+.+..++..
T Consensus 50 ~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 50 QYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666666666666666666655555543
No 24
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.45 E-value=56 Score=34.16 Aligned_cols=11 Identities=18% Similarity=0.344 Sum_probs=8.4
Q ss_pred cccCCCCccee
Q 010177 13 LSVDPNVPRWV 23 (516)
Q Consensus 13 ~~~~~~~~~~~ 23 (516)
++-||.-|||.
T Consensus 355 ~g~~~AA~RYi 365 (760)
T d1bjta_ 355 GGKDAAAARYI 365 (760)
T ss_dssp TSTTCCCGGGC
T ss_pred CCCcchHHHHH
Confidence 46778888885
No 25
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.00 E-value=1.4e+02 Score=23.28 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010177 233 IEETEKQNAEVNAELKELELKSKRFKELEERYWQEFNNFQFQLIAHQEERDAISSKIEVSQAHLELLKRTN 303 (516)
Q Consensus 233 L~~LE~e~~~l~~El~~le~e~~~L~~eE~~~W~e~N~~q~qL~~~~ee~~sl~~q~~~a~~qLdkLrktN 303 (516)
+++-=.+...+..+|..++....++..+.......-+..+-.-.++..-...+..........|+.|.+.|
T Consensus 5 m~~Ff~eV~~Ir~~I~~i~~~v~~i~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~~ 75 (124)
T d1ez3a_ 5 MDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSI 75 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 26
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.56 E-value=1.2e+02 Score=22.57 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010177 225 EERKLEAAIEETEKQNAEVNAELKELELKS 254 (516)
Q Consensus 225 EE~~L~~eL~~LE~e~~~l~~El~~le~e~ 254 (516)
-...|.+++..++.+.+.+..+...|..+.
T Consensus 53 yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l 82 (88)
T d1nkpa_ 53 YILSVQAEEQKLISEEDLLRKRREQLKHKL 82 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555555555544444444443
Done!