Query 010178
Match_columns 516
No_of_seqs 485 out of 2560
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 21:35:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qcp_A QSOX from trypanosoma b 100.0 4E-77 1.4E-81 629.6 18.2 382 44-459 21-429 (470)
2 3t58_A Sulfhydryl oxidase 1; o 100.0 7E-76 2.4E-80 634.3 27.3 375 43-451 9-514 (519)
3 3llk_A Sulfhydryl oxidase 1; d 100.0 2.2E-64 7.4E-69 489.9 14.1 226 205-451 17-256 (261)
4 1jr8_A ERV2 protein, mitochond 99.9 1.2E-27 4E-32 206.3 7.3 90 310-399 9-101 (117)
5 2hj3_A Sulfhydryl oxidase ERV1 99.9 2.1E-27 7.3E-32 206.8 6.3 105 308-413 9-116 (125)
6 3gwn_A Probable FAD-linked sul 99.9 3.4E-25 1.2E-29 190.3 7.7 78 314-391 11-96 (114)
7 3gwl_A P14, FAD-linked sulfhyd 99.9 1.1E-24 3.9E-29 184.4 8.9 83 315-397 10-95 (106)
8 4e0h_A Mitochondrial FAD-linke 99.9 7E-23 2.4E-27 174.0 9.5 80 315-394 10-92 (106)
9 3u5s_A FAD-linked sulfhydryl o 99.9 5.8E-22 2E-26 172.9 9.5 83 315-397 26-111 (126)
10 3zzx_A Thioredoxin; oxidoreduc 99.8 4.7E-20 1.6E-24 156.7 11.9 98 52-173 7-104 (105)
11 4e0i_A Mitochondrial FAD-linke 99.8 1.6E-20 5.4E-25 174.3 9.2 84 312-395 90-176 (189)
12 3h79_A Thioredoxin-like protei 99.8 2.8E-19 9.7E-24 156.2 14.7 114 44-173 13-126 (127)
13 3ga4_A Dolichyl-diphosphooligo 99.8 1.1E-18 3.6E-23 161.7 14.7 133 45-182 17-160 (178)
14 3gnj_A Thioredoxin domain prot 99.7 7.3E-18 2.5E-22 142.7 12.1 107 46-175 4-110 (111)
15 3uvt_A Thioredoxin domain-cont 99.7 8.9E-18 3.1E-22 142.0 12.1 107 45-173 4-110 (111)
16 2av4_A Thioredoxin-like protei 99.7 3.9E-18 1.3E-22 153.5 10.2 112 48-175 23-139 (160)
17 2qsi_A Putative hydrogenase ex 99.7 4.5E-18 1.5E-22 150.5 10.1 106 46-174 15-122 (137)
18 3qfa_C Thioredoxin; protein-pr 99.7 4.7E-18 1.6E-22 146.3 10.1 106 45-174 11-116 (116)
19 2trx_A Thioredoxin; electron t 99.7 1.2E-17 4.1E-22 140.8 12.3 106 46-174 2-107 (108)
20 2voc_A Thioredoxin; electron t 99.7 7.9E-18 2.7E-22 143.7 11.3 105 48-177 3-107 (112)
21 3tco_A Thioredoxin (TRXA-1); d 99.7 1.6E-17 5.6E-22 139.7 12.5 106 45-174 3-108 (109)
22 3die_A Thioredoxin, TRX; elect 99.7 1.5E-17 5.3E-22 139.3 11.7 104 46-174 3-106 (106)
23 2dj1_A Protein disulfide-isome 99.7 1.8E-17 6E-22 146.8 12.5 113 44-178 15-127 (140)
24 3ed3_A Protein disulfide-isome 99.7 1.2E-17 4.1E-22 168.1 12.8 130 41-178 12-145 (298)
25 1mek_A Protein disulfide isome 99.7 7.1E-18 2.4E-22 144.3 8.8 116 43-177 4-119 (120)
26 2pu9_C TRX-F, thioredoxin F-ty 99.7 2.8E-17 9.7E-22 139.6 12.3 107 45-174 4-110 (111)
27 2dml_A Protein disulfide-isome 99.7 2.5E-17 8.4E-22 143.9 12.1 111 43-175 14-124 (130)
28 3p2a_A Thioredoxin 2, putative 99.7 3.2E-17 1.1E-21 147.0 13.0 110 43-176 35-144 (148)
29 2qgv_A Hydrogenase-1 operon pr 99.7 4.9E-18 1.7E-22 150.7 7.5 105 47-175 18-125 (140)
30 2ppt_A Thioredoxin-2; thiredox 99.7 2.6E-17 8.7E-22 149.6 12.3 109 44-176 45-153 (155)
31 3hxs_A Thioredoxin, TRXP; elec 99.7 2.7E-17 9.2E-22 145.9 11.6 111 43-175 19-139 (141)
32 2i4a_A Thioredoxin; acidophIle 99.7 5E-17 1.7E-21 136.4 12.5 105 46-173 2-106 (107)
33 1w4v_A Thioredoxin, mitochondr 99.7 3.6E-17 1.2E-21 141.2 11.8 109 44-175 11-119 (119)
34 3q6o_A Sulfhydryl oxidase 1; p 99.7 5.4E-17 1.8E-21 158.1 14.2 121 43-177 9-129 (244)
35 1x5d_A Protein disulfide-isome 99.7 3.1E-17 1.1E-21 143.6 11.3 114 44-176 5-118 (133)
36 1gh2_A Thioredoxin-like protei 99.7 4.9E-17 1.7E-21 137.2 12.0 104 48-175 3-107 (107)
37 3qou_A Protein YBBN; thioredox 99.7 2.8E-17 9.7E-22 163.6 12.3 108 45-174 6-113 (287)
38 1nsw_A Thioredoxin, TRX; therm 99.7 3.1E-17 1.1E-21 137.5 10.7 103 48-174 2-104 (105)
39 1thx_A Thioredoxin, thioredoxi 99.7 6E-17 2.1E-21 137.7 12.3 108 45-175 6-113 (115)
40 1t00_A Thioredoxin, TRX; redox 99.7 5.4E-17 1.8E-21 137.8 11.9 107 46-175 5-111 (112)
41 2o8v_B Thioredoxin 1; disulfid 99.7 3.4E-17 1.2E-21 143.7 10.7 107 45-174 21-127 (128)
42 2yzu_A Thioredoxin; redox prot 99.7 6.7E-17 2.3E-21 135.8 12.0 106 47-176 2-107 (109)
43 3hz4_A Thioredoxin; NYSGXRC, P 99.7 3E-17 1E-21 146.0 10.4 109 45-176 5-113 (140)
44 1dby_A Chloroplast thioredoxin 99.7 5.4E-17 1.9E-21 136.5 11.2 105 47-174 2-106 (107)
45 3aps_A DNAJ homolog subfamily 99.7 5.5E-17 1.9E-21 140.1 11.2 107 46-175 3-113 (122)
46 2e0q_A Thioredoxin; electron t 99.7 8.9E-17 3E-21 133.7 12.1 103 48-175 1-103 (104)
47 1x5e_A Thioredoxin domain cont 99.7 7.5E-17 2.6E-21 140.3 11.6 108 44-177 5-112 (126)
48 2l5l_A Thioredoxin; structural 99.7 1.1E-16 3.9E-21 141.5 12.7 110 45-177 8-128 (136)
49 1faa_A Thioredoxin F; electron 99.7 1E-16 3.5E-21 138.9 12.0 107 45-174 17-123 (124)
50 1fb6_A Thioredoxin M; electron 99.7 1.2E-16 4.2E-21 133.5 12.0 104 48-174 2-105 (105)
51 1xwb_A Thioredoxin; dimerizati 99.7 1.2E-16 4.2E-21 133.8 11.6 104 48-174 2-106 (106)
52 3d6i_A Monothiol glutaredoxin- 99.7 7.4E-17 2.5E-21 137.1 10.3 106 48-175 2-109 (112)
53 3m9j_A Thioredoxin; oxidoreduc 99.7 1.4E-16 4.8E-21 133.4 11.4 99 52-174 7-105 (105)
54 1ep7_A Thioredoxin CH1, H-type 99.7 8.3E-17 2.8E-21 136.5 9.8 106 47-175 3-111 (112)
55 3gix_A Thioredoxin-like protei 99.7 9.7E-17 3.3E-21 144.8 10.9 111 51-174 9-120 (149)
56 2r2j_A Thioredoxin domain-cont 99.7 1E-16 3.4E-21 166.7 12.6 115 46-178 5-120 (382)
57 2b5e_A Protein disulfide-isome 99.7 1.7E-16 5.8E-21 170.7 14.5 115 43-178 11-125 (504)
58 3f3q_A Thioredoxin-1; His TAG, 99.7 2.1E-16 7.1E-21 134.3 12.0 102 47-174 8-109 (109)
59 2vlu_A Thioredoxin, thioredoxi 99.7 1.7E-16 5.7E-21 137.0 11.4 108 45-176 12-121 (122)
60 1r26_A Thioredoxin; redox-acti 99.7 2.3E-16 7.8E-21 137.9 12.2 105 45-175 18-123 (125)
61 2dj0_A Thioredoxin-related tra 99.7 1.5E-17 5.2E-22 147.2 4.7 88 45-140 6-99 (137)
62 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.3E-16 4.5E-21 137.2 10.5 108 45-175 11-118 (121)
63 4euy_A Uncharacterized protein 99.7 2.8E-17 9.4E-22 138.5 6.0 98 52-174 7-104 (105)
64 2xc2_A Thioredoxinn; oxidoredu 99.7 1.5E-16 5.2E-21 136.5 10.8 103 47-174 14-117 (117)
65 2dj3_A Protein disulfide-isome 99.7 6.1E-17 2.1E-21 142.0 8.3 115 44-177 5-120 (133)
66 2djj_A PDI, protein disulfide- 99.7 8.8E-17 3E-21 138.5 9.0 114 44-176 5-118 (121)
67 3apq_A DNAJ homolog subfamily 99.7 2.7E-16 9.1E-21 149.7 13.1 112 43-178 94-205 (210)
68 1xfl_A Thioredoxin H1; AT3G510 99.7 3.2E-16 1.1E-20 136.6 12.4 109 42-174 12-123 (124)
69 2vim_A Thioredoxin, TRX; thior 99.7 4.5E-16 1.5E-20 129.8 12.1 102 49-174 2-104 (104)
70 1oaz_A Thioredoxin 1; immune s 99.7 5.2E-17 1.8E-21 141.6 6.5 106 46-174 3-122 (123)
71 3us3_A Calsequestrin-1; calciu 99.7 2.6E-16 9E-21 162.8 12.9 112 43-178 10-127 (367)
72 3idv_A Protein disulfide-isome 99.7 2.9E-16 1E-20 151.5 12.2 111 44-176 13-123 (241)
73 3dxb_A Thioredoxin N-terminall 99.7 3.1E-16 1.1E-20 150.7 11.9 112 43-177 9-120 (222)
74 1syr_A Thioredoxin; SGPP, stru 99.7 4.3E-16 1.5E-20 132.7 11.3 104 45-174 8-111 (112)
75 3td7_A FAD-linked sulfhydryl o 99.7 7.6E-17 2.6E-21 155.5 7.3 77 315-391 46-130 (295)
76 3cxg_A Putative thioredoxin; m 99.7 2.2E-16 7.7E-21 139.4 9.5 109 45-176 19-130 (133)
77 3ul3_B Thioredoxin, thioredoxi 99.7 1.6E-16 5.5E-21 138.9 8.4 87 64-172 41-127 (128)
78 2wz9_A Glutaredoxin-3; protein 99.7 5.7E-16 2E-20 140.0 11.9 108 46-177 12-120 (153)
79 3emx_A Thioredoxin; structural 99.6 1.9E-16 6.7E-21 140.0 8.1 106 45-176 15-127 (135)
80 1sji_A Calsequestrin 2, calseq 99.6 3.1E-16 1.1E-20 161.0 10.6 110 44-178 9-125 (350)
81 3idv_A Protein disulfide-isome 99.6 1.1E-15 3.7E-20 147.6 13.7 112 44-177 128-239 (241)
82 3f8u_A Protein disulfide-isome 99.6 4.3E-16 1.5E-20 166.5 11.8 110 47-178 2-112 (481)
83 1v98_A Thioredoxin; oxidoreduc 99.6 6.5E-16 2.2E-20 137.1 11.0 106 46-175 33-138 (140)
84 1qgv_A Spliceosomal protein U5 99.6 6.3E-16 2.2E-20 138.3 10.5 111 52-175 10-121 (142)
85 1zma_A Bacterocin transport ac 99.6 4.5E-16 1.5E-20 133.8 9.0 104 46-171 12-117 (118)
86 2l6c_A Thioredoxin; oxidoreduc 99.6 5.8E-16 2E-20 131.8 9.3 103 48-176 5-107 (110)
87 2l57_A Uncharacterized protein 99.6 5.8E-16 2E-20 134.6 9.4 93 64-176 25-118 (126)
88 3evi_A Phosducin-like protein 99.6 1.2E-15 4.1E-20 132.3 10.3 106 47-172 4-111 (118)
89 2oe3_A Thioredoxin-3; electron 99.6 1.4E-15 4.7E-20 130.6 10.4 103 44-172 10-113 (114)
90 3d22_A TRXH4, thioredoxin H-ty 99.6 1.8E-15 6.2E-20 133.8 10.5 108 45-176 23-133 (139)
91 2vm1_A Thioredoxin, thioredoxi 99.6 2.4E-15 8.3E-20 128.5 10.6 107 46-176 6-115 (118)
92 2fwh_A Thiol:disulfide interch 99.6 2.8E-15 9.7E-20 132.2 11.0 107 50-175 16-128 (134)
93 2es7_A Q8ZP25_salty, putative 99.6 9.3E-16 3.2E-20 137.4 7.9 107 47-178 18-128 (142)
94 2dbc_A PDCL2, unnamed protein 99.6 4.1E-15 1.4E-19 131.6 12.0 104 45-174 9-120 (135)
95 2kuc_A Putative disulphide-iso 99.6 1.6E-15 5.5E-20 132.3 8.9 109 48-176 8-122 (130)
96 1ti3_A Thioredoxin H, PTTRXH1; 99.6 2.9E-15 9.8E-20 127.0 10.2 105 47-175 5-112 (113)
97 2c0g_A ERP29 homolog, windbeut 99.6 5.3E-15 1.8E-19 144.4 13.4 113 42-176 12-133 (248)
98 3uem_A Protein disulfide-isome 99.6 3.9E-15 1.3E-19 153.0 12.3 111 44-175 247-357 (361)
99 2j23_A Thioredoxin; immune pro 99.6 2.2E-15 7.5E-20 130.4 8.7 104 47-174 16-120 (121)
100 2f51_A Thioredoxin; electron t 99.6 4.7E-15 1.6E-19 127.9 10.0 109 47-176 4-114 (118)
101 3f8u_A Protein disulfide-isome 99.6 1.2E-14 4.2E-19 155.2 13.2 117 45-181 351-467 (481)
102 2yj7_A LPBCA thioredoxin; oxid 99.3 3.1E-16 1.1E-20 130.8 0.0 103 48-173 3-105 (106)
103 2qc7_A ERP31, ERP28, endoplasm 99.5 3.2E-14 1.1E-18 138.3 12.9 108 45-174 4-118 (240)
104 3apo_A DNAJ homolog subfamily 99.5 7.5E-15 2.6E-19 166.1 9.5 112 43-178 113-224 (780)
105 1a8l_A Protein disulfide oxido 99.5 2.4E-14 8.3E-19 137.0 11.1 108 48-174 118-225 (226)
106 1wou_A Thioredoxin -related pr 99.5 2.4E-14 8.2E-19 124.4 9.3 105 47-172 6-122 (123)
107 3fk8_A Disulphide isomerase; A 99.5 2.3E-14 7.7E-19 125.7 8.5 100 54-173 16-131 (133)
108 1wmj_A Thioredoxin H-type; str 99.5 5.3E-15 1.8E-19 128.7 3.8 108 45-176 13-123 (130)
109 2b5e_A Protein disulfide-isome 99.5 5.2E-14 1.8E-18 151.3 11.8 113 45-177 357-469 (504)
110 2trc_P Phosducin, MEKA, PP33; 99.5 1.5E-14 5.3E-19 138.6 6.5 104 46-173 99-211 (217)
111 1a0r_P Phosducin, MEKA, PP33; 99.5 5E-14 1.7E-18 137.3 8.8 110 46-173 112-224 (245)
112 1fo5_A Thioredoxin; disulfide 99.5 6.3E-14 2.2E-18 112.4 7.9 83 66-174 3-85 (85)
113 2lst_A Thioredoxin; structural 99.2 4.8E-15 1.6E-19 129.4 0.0 94 65-176 19-117 (130)
114 3f9u_A Putative exported cytoc 99.5 6.5E-14 2.2E-18 128.5 7.6 106 48-175 28-166 (172)
115 1nho_A Probable thioredoxin; b 99.5 8.3E-14 2.8E-18 111.8 7.1 81 68-174 4-84 (85)
116 2b5x_A YKUV protein, TRXY; thi 99.5 4.2E-13 1.4E-17 118.6 12.0 105 49-175 15-145 (148)
117 3kp8_A Vkorc1/thioredoxin doma 99.4 2.9E-14 9.8E-19 121.1 3.0 75 66-171 13-91 (106)
118 2ju5_A Thioredoxin disulfide i 99.4 2.1E-13 7.1E-18 123.3 8.8 101 54-175 34-152 (154)
119 3dml_A Putative uncharacterize 99.4 5.1E-14 1.8E-18 121.1 4.0 93 65-175 18-110 (116)
120 2ywm_A Glutaredoxin-like prote 99.4 4E-13 1.4E-17 128.9 10.8 102 47-175 119-220 (229)
121 1zzo_A RV1677; thioredoxin fol 99.4 8.8E-13 3E-17 114.6 10.2 104 48-175 10-135 (136)
122 2djk_A PDI, protein disulfide- 99.4 7.7E-13 2.6E-17 116.6 9.7 104 47-176 7-116 (133)
123 2hls_A Protein disulfide oxido 99.4 1.3E-12 4.6E-17 127.2 12.3 106 51-179 125-230 (243)
124 1lu4_A Soluble secreted antige 99.4 9E-13 3.1E-17 114.8 9.7 89 64-174 23-135 (136)
125 3raz_A Thioredoxin-related pro 99.4 1.9E-12 6.6E-17 115.7 11.7 97 60-175 19-140 (151)
126 3erw_A Sporulation thiol-disul 99.4 8.8E-13 3E-17 116.0 9.1 88 64-170 33-144 (145)
127 3iv4_A Putative oxidoreductase 99.4 8.2E-13 2.8E-17 112.3 8.3 98 48-170 8-111 (112)
128 2f9s_A Thiol-disulfide oxidore 99.4 1.3E-12 4.5E-17 116.5 9.8 94 64-176 25-139 (151)
129 2h30_A Thioredoxin, peptide me 99.4 8.7E-13 3E-17 119.2 8.6 108 47-175 22-156 (164)
130 3apo_A DNAJ homolog subfamily 99.4 2.1E-12 7.1E-17 146.1 13.0 113 46-176 543-657 (780)
131 3lor_A Thiol-disulfide isomera 99.4 3.1E-12 1E-16 115.0 10.9 93 64-175 29-155 (160)
132 3or5_A Thiol:disulfide interch 99.4 3.2E-12 1.1E-16 115.4 11.1 106 48-176 19-152 (165)
133 2ywm_A Glutaredoxin-like prote 99.3 1.9E-12 6.4E-17 124.2 9.9 101 54-175 9-115 (229)
134 3eyt_A Uncharacterized protein 99.3 4.5E-12 1.5E-16 113.8 11.2 95 62-175 25-152 (158)
135 1a8l_A Protein disulfide oxido 99.3 1.7E-12 5.6E-17 124.2 8.8 103 53-175 9-113 (226)
136 1sen_A Thioredoxin-like protei 99.3 6.5E-13 2.2E-17 121.5 5.4 108 54-175 37-148 (164)
137 2lja_A Putative thiol-disulfid 99.3 3.7E-12 1.3E-16 113.5 9.9 108 48-176 15-144 (152)
138 3fkf_A Thiol-disulfide oxidore 99.3 3.1E-12 1.1E-16 113.0 9.2 90 64-175 32-146 (148)
139 1ilo_A Conserved hypothetical 99.3 2.9E-12 1E-16 100.9 7.9 74 68-170 2-76 (77)
140 4evm_A Thioredoxin family prot 99.3 4E-12 1.4E-16 110.2 9.5 89 64-172 21-136 (138)
141 1z6n_A Hypothetical protein PA 99.3 2.4E-12 8.3E-17 118.2 8.2 78 50-138 40-120 (167)
142 3hcz_A Possible thiol-disulfid 99.3 3.9E-12 1.3E-16 112.4 7.9 103 49-174 17-145 (148)
143 2lrn_A Thiol:disulfide interch 99.3 8.8E-12 3E-16 111.5 9.8 91 64-176 28-142 (152)
144 2l5o_A Putative thioredoxin; s 99.3 6.3E-12 2.2E-16 112.1 8.4 94 64-176 27-142 (153)
145 3ewl_A Uncharacterized conserv 99.3 8.4E-12 2.9E-16 109.9 8.3 93 60-174 22-140 (142)
146 3ph9_A Anterior gradient prote 99.3 1E-11 3.4E-16 112.2 8.6 88 65-175 44-145 (151)
147 1i5g_A Tryparedoxin II; electr 99.2 1.3E-11 4.4E-16 109.3 8.6 87 48-141 13-123 (144)
148 3gl3_A Putative thiol:disulfid 99.2 2.9E-11 1E-15 107.6 10.4 97 62-177 25-144 (152)
149 3ia1_A THIO-disulfide isomeras 99.2 2.1E-11 7.1E-16 108.9 9.4 93 61-176 27-145 (154)
150 3eur_A Uncharacterized protein 99.2 2.3E-11 7.8E-16 107.5 8.7 101 48-172 16-142 (142)
151 1o8x_A Tryparedoxin, TRYX, TXN 99.2 3.6E-11 1.2E-15 106.7 9.4 77 60-141 23-123 (146)
152 3s9f_A Tryparedoxin; thioredox 99.2 3.9E-11 1.3E-15 109.4 9.3 76 61-141 44-143 (165)
153 3hdc_A Thioredoxin family prot 99.2 4.9E-11 1.7E-15 107.4 9.6 107 48-175 26-152 (158)
154 3ira_A Conserved protein; meth 99.2 1.5E-11 5.2E-16 113.4 6.3 80 50-140 26-117 (173)
155 3fw2_A Thiol-disulfide oxidore 99.2 7E-11 2.4E-15 105.3 10.4 91 62-174 30-147 (150)
156 3kp9_A Vkorc1/thioredoxin doma 99.2 2.6E-11 8.8E-16 120.7 7.8 83 54-171 190-276 (291)
157 3lwa_A Secreted thiol-disulfid 99.2 5.3E-11 1.8E-15 109.9 9.4 108 52-175 48-181 (183)
158 1o73_A Tryparedoxin; electron 99.2 4.5E-11 1.5E-15 105.5 8.4 76 61-141 24-123 (144)
159 2lrt_A Uncharacterized protein 99.2 6.8E-11 2.3E-15 106.1 9.6 88 64-170 34-143 (152)
160 3ha9_A Uncharacterized thiored 99.2 8.5E-11 2.9E-15 106.4 10.2 93 60-175 32-164 (165)
161 3kcm_A Thioredoxin family prot 99.2 5.8E-11 2E-15 105.9 8.9 93 64-175 27-143 (154)
162 3uem_A Protein disulfide-isome 99.2 9.6E-11 3.3E-15 120.1 11.7 112 45-177 116-232 (361)
163 2b1k_A Thiol:disulfide interch 99.2 4.1E-11 1.4E-15 108.8 7.2 89 64-175 50-160 (168)
164 1kng_A Thiol:disulfide interch 99.1 4.2E-11 1.4E-15 106.9 6.9 90 64-175 41-152 (156)
165 2cvb_A Probable thiol-disulfid 99.1 1.2E-10 4.2E-15 107.9 10.0 105 60-176 28-160 (188)
166 2hyx_A Protein DIPZ; thioredox 99.1 1.5E-10 5.2E-15 118.6 10.6 97 60-175 77-199 (352)
167 4fo5_A Thioredoxin-like protei 99.1 9.7E-11 3.3E-15 103.5 8.0 75 60-140 27-126 (143)
168 1jfu_A Thiol:disulfide interch 99.1 2.7E-10 9.2E-15 105.3 10.5 107 49-176 46-181 (186)
169 2ywi_A Hypothetical conserved 99.1 1.3E-10 4.3E-15 108.3 8.2 100 65-175 45-174 (196)
170 3kh7_A Thiol:disulfide interch 99.1 1.3E-10 4.4E-15 107.1 7.7 92 61-175 54-167 (176)
171 2fgx_A Putative thioredoxin; N 99.1 1.6E-10 5.5E-15 97.9 7.5 77 67-170 30-106 (107)
172 2dlx_A UBX domain-containing p 99.1 2.4E-10 8.1E-15 103.3 8.6 107 53-178 28-139 (153)
173 2lus_A Thioredoxion; CR-Trp16, 98.6 1.6E-11 5.3E-16 108.1 0.0 74 64-141 24-122 (143)
174 2ggt_A SCO1 protein homolog, m 99.0 3.4E-10 1.2E-14 101.9 8.2 97 64-175 22-161 (164)
175 3u5r_E Uncharacterized protein 99.0 5.9E-10 2E-14 106.4 9.8 116 48-175 43-187 (218)
176 1ttz_A Conserved hypothetical 99.0 2.6E-10 9E-15 93.0 5.5 75 69-175 3-77 (87)
177 3cmi_A Peroxiredoxin HYR1; thi 99.0 4.6E-10 1.6E-14 102.5 7.6 94 62-175 29-168 (171)
178 2rli_A SCO2 protein homolog, m 99.0 9.1E-10 3.1E-14 99.9 8.6 99 62-175 23-164 (171)
179 3dwv_A Glutathione peroxidase- 99.0 6.8E-10 2.3E-14 103.2 7.8 107 48-175 31-183 (187)
180 2p5q_A Glutathione peroxidase 99.0 7.8E-10 2.7E-14 100.1 7.7 95 62-175 29-168 (170)
181 2vup_A Glutathione peroxidase- 99.0 9.6E-10 3.3E-14 102.4 8.0 106 49-175 34-185 (190)
182 2v1m_A Glutathione peroxidase; 98.9 1.8E-09 6.1E-14 97.7 8.2 46 62-113 28-73 (169)
183 2p31_A CL683, glutathione pero 98.9 8.9E-10 3.1E-14 101.8 6.3 57 49-113 35-91 (181)
184 2k6v_A Putative cytochrome C o 98.9 9.4E-10 3.2E-14 99.8 6.0 98 60-173 30-171 (172)
185 3drn_A Peroxiredoxin, bacterio 98.9 3.4E-09 1.2E-13 95.8 9.3 85 48-140 13-123 (161)
186 2hls_A Protein disulfide oxido 98.9 4.1E-09 1.4E-13 102.4 10.5 99 53-174 14-116 (243)
187 2ls5_A Uncharacterized protein 98.4 1.5E-10 5E-15 104.2 0.0 92 62-172 30-145 (159)
188 3kij_A Probable glutathione pe 98.9 3.3E-09 1.1E-13 97.8 8.4 58 48-113 23-80 (180)
189 2f8a_A Glutathione peroxidase 98.9 3.1E-09 1.1E-13 100.8 7.7 46 62-113 44-89 (208)
190 1xvw_A Hypothetical protein RV 98.9 3.1E-09 1.1E-13 95.5 7.0 72 63-140 33-134 (160)
191 2obi_A PHGPX, GPX-4, phospholi 98.8 2.9E-09 9.9E-14 98.3 6.8 57 49-113 33-89 (183)
192 2e7p_A Glutaredoxin; thioredox 98.8 1.1E-09 3.6E-14 93.3 3.5 87 55-173 12-106 (116)
193 1we0_A Alkyl hydroperoxide red 98.8 4.4E-09 1.5E-13 97.5 7.4 94 63-175 29-157 (187)
194 2bmx_A Alkyl hydroperoxidase C 98.8 5.8E-09 2E-13 97.4 8.1 95 62-175 42-170 (195)
195 2gs3_A PHGPX, GPX-4, phospholi 98.8 4.4E-09 1.5E-13 97.4 7.1 57 49-113 35-91 (185)
196 1zof_A Alkyl hydroperoxide-red 98.8 6.1E-09 2.1E-13 97.5 6.6 92 64-174 32-160 (198)
197 2k8s_A Thioredoxin; dimer, str 98.8 5.1E-09 1.7E-13 83.3 5.1 60 69-139 4-64 (80)
198 1wjk_A C330018D20RIK protein; 98.8 7.4E-09 2.5E-13 86.4 6.1 81 66-175 16-96 (100)
199 1qmv_A Human thioredoxin perox 98.8 1.9E-08 6.4E-13 94.1 9.1 93 63-174 32-162 (197)
200 1eej_A Thiol:disulfide interch 98.7 1.6E-08 5.5E-13 96.4 8.0 84 64-174 85-210 (216)
201 1uul_A Tryparedoxin peroxidase 98.7 2E-08 7E-13 94.3 8.6 96 64-174 35-164 (202)
202 1zye_A Thioredoxin-dependent p 98.7 2E-08 6.9E-13 95.9 8.4 98 62-174 53-184 (220)
203 3gkn_A Bacterioferritin comigr 98.7 2.2E-08 7.6E-13 90.2 8.1 73 62-140 32-137 (163)
204 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.8E-08 1.3E-12 106.1 10.7 96 49-172 102-197 (521)
205 3gyk_A 27KDA outer membrane pr 98.7 3.9E-08 1.3E-12 89.9 9.2 86 64-175 21-173 (175)
206 2b7k_A SCO1 protein; metalloch 98.7 1.9E-08 6.6E-13 94.4 7.2 110 48-175 26-179 (200)
207 1xzo_A BSSCO, hypothetical pro 98.7 2.8E-08 9.5E-13 90.3 7.9 47 63-113 31-78 (174)
208 2h01_A 2-Cys peroxiredoxin; th 98.7 2.7E-08 9.2E-13 92.6 7.6 96 64-174 30-158 (192)
209 1ego_A Glutaredoxin; electron 98.7 5.2E-08 1.8E-12 77.8 7.7 77 69-174 3-83 (85)
210 2i3y_A Epididymal secretory gl 98.7 8.1E-08 2.8E-12 91.6 10.3 57 48-113 40-97 (215)
211 3ztl_A Thioredoxin peroxidase; 98.7 6.5E-08 2.2E-12 92.5 9.4 93 61-172 65-195 (222)
212 2i81_A 2-Cys peroxiredoxin; st 98.6 8.7E-08 3E-12 91.1 8.3 96 64-174 51-179 (213)
213 3ixr_A Bacterioferritin comigr 98.6 1.6E-07 5.3E-12 86.6 9.1 85 48-140 36-153 (179)
214 4g2e_A Peroxiredoxin; redox pr 98.6 1.8E-08 6.1E-13 91.0 2.6 99 60-172 25-155 (157)
215 2jsy_A Probable thiol peroxida 98.5 1.7E-07 5.7E-12 84.8 8.6 90 64-174 43-166 (167)
216 1t3b_A Thiol:disulfide interch 98.5 1E-07 3.6E-12 90.4 7.3 84 64-172 85-208 (211)
217 2r37_A Glutathione peroxidase 98.5 3.4E-07 1.2E-11 86.6 9.5 47 60-113 33-79 (207)
218 2pn8_A Peroxiredoxin-4; thiore 98.5 3.7E-07 1.3E-11 86.6 9.1 99 61-174 44-176 (211)
219 3me7_A Putative uncharacterize 98.5 3.4E-07 1.2E-11 83.5 8.4 109 49-176 14-163 (170)
220 1xvq_A Thiol peroxidase; thior 98.4 3.4E-07 1.2E-11 83.8 8.1 69 64-141 43-142 (175)
221 2a4v_A Peroxiredoxin DOT5; yea 98.4 4.4E-07 1.5E-11 81.4 8.6 68 66-141 36-130 (159)
222 4f9z_D Endoplasmic reticulum r 98.4 2E-06 6.7E-11 82.3 12.6 112 45-175 112-225 (227)
223 2c0d_A Thioredoxin peroxidase 98.4 4.4E-07 1.5E-11 86.8 7.9 92 64-174 55-183 (221)
224 3qpm_A Peroxiredoxin; oxidored 98.4 7.8E-07 2.7E-11 86.1 9.7 98 60-172 72-203 (240)
225 1n8j_A AHPC, alkyl hydroperoxi 98.4 6.7E-07 2.3E-11 82.9 8.3 92 64-174 29-155 (186)
226 4gqc_A Thiol peroxidase, perox 98.4 1.1E-07 3.8E-12 86.5 2.4 97 65-175 33-160 (164)
227 1nm3_A Protein HI0572; hybrid, 98.3 7.7E-07 2.6E-11 85.8 8.3 72 64-141 32-137 (241)
228 1psq_A Probable thiol peroxida 98.3 7.4E-07 2.5E-11 80.4 7.5 45 61-113 38-83 (163)
229 3hd5_A Thiol:disulfide interch 98.3 8.5E-07 2.9E-11 82.5 8.1 41 65-112 25-65 (195)
230 1tp9_A Peroxiredoxin, PRX D (t 98.3 7.3E-07 2.5E-11 80.6 6.5 43 64-112 34-79 (162)
231 2wfc_A Peroxiredoxin 5, PRDX5; 98.3 6.8E-07 2.3E-11 81.5 6.3 44 64-113 30-76 (167)
232 1v58_A Thiol:disulfide interch 98.3 9E-07 3.1E-11 85.7 7.5 88 65-175 97-233 (241)
233 3h93_A Thiol:disulfide interch 98.3 1.2E-06 4.1E-11 81.3 7.9 40 65-111 25-64 (192)
234 3a2v_A Probable peroxiredoxin; 98.3 9.6E-07 3.3E-11 86.0 7.3 95 65-174 33-161 (249)
235 3p7x_A Probable thiol peroxida 98.3 7.2E-07 2.5E-11 80.8 5.9 105 49-172 32-165 (166)
236 3tjj_A Peroxiredoxin-4; thiore 98.2 1.7E-06 5.7E-11 84.6 7.6 98 60-172 86-217 (254)
237 2yzh_A Probable thiol peroxida 98.2 1.3E-06 4.6E-11 79.3 6.5 46 60-113 42-88 (171)
238 1q98_A Thiol peroxidase, TPX; 98.2 1.7E-06 5.7E-11 78.3 6.9 46 60-113 38-84 (165)
239 3uma_A Hypothetical peroxiredo 98.2 2E-06 6.7E-11 79.9 6.9 43 65-113 56-101 (184)
240 3zrd_A Thiol peroxidase; oxido 98.2 2.5E-06 8.6E-11 80.0 7.6 82 49-140 64-177 (200)
241 3mng_A Peroxiredoxin-5, mitoch 98.1 3.7E-06 1.3E-10 77.2 7.2 34 64-97 42-77 (173)
242 1h75_A Glutaredoxin-like prote 98.1 2.3E-06 7.9E-11 67.5 4.2 51 69-134 3-56 (81)
243 3hz8_A Thiol:disulfide interch 98.1 1.3E-05 4.4E-10 74.7 9.8 41 65-112 24-64 (193)
244 1kte_A Thioltransferase; redox 98.0 1.1E-06 3.9E-11 73.1 1.9 66 55-134 4-74 (105)
245 1r7h_A NRDH-redoxin; thioredox 98.0 1.2E-05 4E-10 62.1 7.3 51 69-134 3-56 (75)
246 4f9z_D Endoplasmic reticulum r 98.0 1.2E-05 4.2E-10 76.7 8.8 100 46-176 9-113 (227)
247 2znm_A Thiol:disulfide interch 98.0 1.1E-05 3.7E-10 74.8 7.9 31 65-95 22-52 (195)
248 4hde_A SCO1/SENC family lipopr 98.0 1.3E-05 4.5E-10 73.0 8.3 61 47-113 16-77 (170)
249 2l4c_A Endoplasmic reticulum r 98.0 4.9E-05 1.7E-09 65.8 11.0 95 48-173 23-122 (124)
250 1prx_A HORF6; peroxiredoxin, h 98.0 3.5E-05 1.2E-09 73.6 10.7 41 67-113 34-74 (224)
251 2cq9_A GLRX2 protein, glutared 98.0 6.8E-06 2.3E-10 71.7 5.1 65 53-134 17-86 (130)
252 1xcc_A 1-Cys peroxiredoxin; un 97.9 1.1E-05 3.9E-10 76.8 7.0 92 67-173 34-164 (220)
253 2hze_A Glutaredoxin-1; thiored 97.9 4E-06 1.4E-10 71.2 3.4 57 68-134 20-81 (114)
254 2v2g_A Peroxiredoxin 6; oxidor 97.9 2.2E-05 7.7E-10 75.5 8.5 42 66-113 30-72 (233)
255 1un2_A DSBA, thiol-disulfide i 97.9 1.3E-06 4.3E-11 82.1 -0.7 42 65-113 113-157 (197)
256 2ht9_A Glutaredoxin-2; thiored 97.9 7.9E-06 2.7E-10 72.9 4.4 69 53-140 39-112 (146)
257 1z6m_A Conserved hypothetical 97.9 4.2E-05 1.4E-09 69.5 9.4 31 64-94 26-56 (175)
258 2rem_A Disulfide oxidoreductas 97.8 4.4E-05 1.5E-09 70.4 8.7 31 65-95 25-55 (193)
259 2pwj_A Mitochondrial peroxired 97.8 1.1E-05 3.9E-10 73.6 4.4 59 66-130 45-107 (171)
260 3gv1_A Disulfide interchange p 97.8 3.9E-05 1.3E-09 68.4 7.6 83 64-175 13-139 (147)
261 3l9v_A Putative thiol-disulfid 97.8 2.8E-05 9.7E-10 72.1 6.1 40 66-112 15-57 (189)
262 1sji_A Calsequestrin 2, calseq 97.7 0.0002 6.8E-09 72.7 12.4 114 45-176 225-347 (350)
263 3keb_A Probable thiol peroxida 97.7 4.8E-05 1.6E-09 72.6 7.2 96 60-174 43-175 (224)
264 4dvc_A Thiol:disulfide interch 97.7 0.00012 4.2E-09 66.5 9.2 32 65-96 21-52 (184)
265 2h8l_A Protein disulfide-isome 97.6 0.0002 6.7E-09 69.4 10.4 109 45-177 5-115 (252)
266 3sbc_A Peroxiredoxin TSA1; alp 97.6 0.00011 3.7E-09 69.7 8.1 98 60-172 47-178 (216)
267 2ec4_A FAS-associated factor 1 97.6 0.00036 1.2E-08 64.1 11.3 108 51-174 35-167 (178)
268 2klx_A Glutaredoxin; thioredox 97.6 5.1E-05 1.7E-09 61.0 4.9 53 69-134 8-61 (89)
269 3c1r_A Glutaredoxin-1; oxidize 97.6 3.6E-05 1.2E-09 65.8 3.5 67 54-134 16-88 (118)
270 3us3_A Calsequestrin-1; calciu 97.5 0.00028 9.6E-09 72.3 9.9 102 46-176 125-228 (367)
271 3ec3_A Protein disulfide-isome 97.5 0.00041 1.4E-08 67.1 9.9 109 44-176 4-116 (250)
272 4eo3_A Bacterioferritin comigr 97.4 0.00019 6.5E-09 72.3 7.5 111 48-180 9-144 (322)
273 3ic4_A Glutaredoxin (GRX-1); s 97.4 8.8E-05 3E-09 59.8 3.9 73 69-171 14-91 (92)
274 2yan_A Glutaredoxin-3; oxidore 97.3 0.00023 8E-09 59.2 5.3 66 54-140 8-82 (105)
275 3tue_A Tryparedoxin peroxidase 97.3 0.00045 1.5E-08 65.6 7.8 98 60-172 51-182 (219)
276 3msz_A Glutaredoxin 1; alpha-b 97.3 0.00018 6E-09 57.3 4.2 56 68-134 5-67 (89)
277 3l9s_A Thiol:disulfide interch 97.2 0.00047 1.6E-08 64.0 6.6 30 66-95 22-54 (191)
278 3nzn_A Glutaredoxin; structura 97.2 0.00053 1.8E-08 56.8 6.2 72 68-170 23-101 (103)
279 3rhb_A ATGRXC5, glutaredoxin-C 97.2 0.00018 6E-09 60.6 3.0 63 55-134 11-79 (113)
280 1fov_A Glutaredoxin 3, GRX3; a 97.1 0.00043 1.5E-08 54.1 4.9 53 69-134 3-57 (82)
281 3gha_A Disulfide bond formatio 97.0 0.0036 1.2E-07 58.4 10.7 42 65-111 29-71 (202)
282 3ctg_A Glutaredoxin-2; reduced 97.0 0.00031 1.1E-08 61.0 2.9 68 53-134 27-100 (129)
283 2lqo_A Putative glutaredoxin R 97.0 0.0016 5.5E-08 53.0 6.8 74 69-175 6-84 (92)
284 3bj5_A Protein disulfide-isome 96.9 0.0088 3E-07 52.9 11.9 113 45-177 13-129 (147)
285 2khp_A Glutaredoxin; thioredox 96.9 0.00067 2.3E-08 54.5 4.0 53 69-134 8-62 (92)
286 3h8q_A Thioredoxin reductase 3 96.9 0.0013 4.3E-08 55.6 5.9 64 54-134 8-76 (114)
287 3qmx_A Glutaredoxin A, glutare 96.8 0.00083 2.8E-08 55.4 4.1 54 68-134 17-73 (99)
288 3f4s_A Alpha-DSBA1, putative u 96.7 0.0097 3.3E-07 56.6 11.0 41 65-110 39-80 (226)
289 4f82_A Thioredoxin reductase; 96.5 0.0047 1.6E-07 56.5 6.8 64 55-127 40-107 (176)
290 2r2j_A Thioredoxin domain-cont 96.4 0.013 4.4E-07 60.1 10.4 111 46-178 219-332 (382)
291 1wik_A Thioredoxin-like protei 96.4 0.0043 1.5E-07 51.8 5.6 64 53-133 5-75 (109)
292 3feu_A Putative lipoprotein; a 96.2 0.0021 7.2E-08 59.1 3.0 30 65-94 22-51 (185)
293 2h8l_A Protein disulfide-isome 94.7 0.1 3.4E-06 50.0 9.0 109 46-177 114-232 (252)
294 3l4n_A Monothiol glutaredoxin- 94.7 0.02 6.8E-07 49.4 3.5 67 54-134 5-76 (127)
295 2axo_A Hypothetical protein AT 94.5 0.12 4.1E-06 50.3 9.1 81 67-174 44-142 (270)
296 3ed3_A Protein disulfide-isome 94.0 0.16 5.4E-06 50.1 9.0 104 45-175 142-267 (298)
297 3q6o_A Sulfhydryl oxidase 1; p 94.0 0.3 1E-05 46.2 10.5 77 46-137 138-214 (244)
298 1xiy_A Peroxiredoxin, pfaop; a 93.7 0.1 3.6E-06 47.7 6.4 60 65-130 43-107 (182)
299 3tdg_A DSBG, putative uncharac 93.4 0.091 3.1E-06 51.2 5.8 29 65-93 147-175 (273)
300 2wci_A Glutaredoxin-4; redox-a 92.7 0.039 1.3E-06 48.0 1.8 65 54-134 26-96 (135)
301 1aba_A Glutaredoxin; electron 92.3 0.054 1.9E-06 42.8 2.0 53 69-134 2-70 (87)
302 3c7m_A Thiol:disulfide interch 92.2 0.14 4.8E-06 46.4 5.1 41 65-112 17-58 (195)
303 3t58_A Sulfhydryl oxidase 1; o 92.0 0.25 8.6E-06 52.7 7.4 78 46-138 138-215 (519)
304 1nm3_A Protein HI0572; hybrid, 91.9 0.23 7.9E-06 46.9 6.3 54 68-134 171-225 (241)
305 2jwa_A Receptor tyrosine-prote 91.6 0.15 5.1E-06 35.1 3.3 29 482-510 15-44 (44)
306 3zyw_A Glutaredoxin-3; metal b 91.2 0.12 4.2E-06 43.1 3.2 62 56-134 9-77 (111)
307 3gx8_A Monothiol glutaredoxin- 91.2 0.21 7.3E-06 42.3 4.7 66 55-134 8-80 (121)
308 3ec3_A Protein disulfide-isome 90.4 1.4 4.9E-05 41.7 10.4 106 46-177 116-230 (250)
309 2ct6_A SH3 domain-binding glut 90.2 0.36 1.2E-05 40.0 5.1 53 69-134 10-78 (111)
310 3ipz_A Monothiol glutaredoxin- 89.7 0.2 6.9E-06 41.5 3.2 63 55-134 10-79 (109)
311 2xhf_A Peroxiredoxin 5; oxidor 89.6 0.25 8.5E-06 44.7 4.0 57 65-127 42-101 (171)
312 1t1v_A SH3BGRL3, SH3 domain-bi 88.4 0.21 7.2E-06 39.9 2.3 53 69-134 4-66 (93)
313 2wem_A Glutaredoxin-related pr 88.2 0.27 9.2E-06 41.5 3.0 64 54-134 11-82 (118)
314 3gn3_A Putative protein-disulf 84.1 1.3 4.6E-05 40.0 5.6 42 65-112 14-55 (182)
315 3bci_A Disulfide bond protein 83.9 1.7 5.7E-05 39.0 6.2 43 65-112 11-54 (186)
316 2in3_A Hypothetical protein; D 82.6 1 3.5E-05 41.4 4.2 47 116-175 164-210 (216)
317 3gmf_A Protein-disulfide isome 80.2 2.7 9.2E-05 38.8 6.2 43 65-112 15-58 (205)
318 2jad_A Yellow fluorescent prot 78.8 0.94 3.2E-05 45.8 2.7 67 55-134 253-324 (362)
319 3bci_A Disulfide bond protein 77.7 1.6 5.5E-05 39.1 3.7 41 117-175 138-178 (186)
320 2ks1_B Epidermal growth factor 74.8 2.8 9.6E-05 28.8 3.3 30 480-509 13-42 (44)
321 1u6t_A SH3 domain-binding glut 74.7 4.4 0.00015 34.3 5.3 58 68-134 1-70 (121)
322 3kzq_A Putative uncharacterize 73.7 2.2 7.6E-05 39.0 3.6 46 117-175 158-203 (208)
323 2l2t_A Receptor tyrosine-prote 73.4 2.2 7.5E-05 29.3 2.5 24 483-506 15-38 (44)
324 2x8g_A Thioredoxin glutathione 71.1 2.8 9.7E-05 45.0 4.2 64 54-134 9-77 (598)
325 3feu_A Putative lipoprotein; a 66.6 3.8 0.00013 36.9 3.4 44 116-174 140-183 (185)
326 3gmf_A Protein-disulfide isome 64.4 4.6 0.00016 37.2 3.6 41 117-175 156-197 (205)
327 3gn3_A Putative protein-disulf 63.9 4.7 0.00016 36.3 3.5 38 118-170 144-181 (182)
328 1t4y_A Adaptive-response senso 61.9 60 0.0021 26.4 9.3 84 68-172 13-96 (105)
329 2imf_A HCCA isomerase, 2-hydro 59.6 6 0.0002 35.9 3.4 42 117-176 156-197 (203)
330 2wul_A Glutaredoxin related pr 57.5 6.7 0.00023 32.9 3.0 66 53-134 10-82 (118)
331 3c7m_A Thiol:disulfide interch 52.4 5.2 0.00018 35.6 1.7 43 117-174 151-193 (195)
332 3gl5_A Putative DSBA oxidoredu 46.0 15 0.00053 34.3 3.9 42 118-176 173-214 (239)
333 2k9y_A Ephrin type-A receptor 45.4 4.1 0.00014 27.2 -0.2 19 474-492 9-27 (41)
334 2kw0_A CCMH protein; oxidoredu 42.5 14 0.00048 29.4 2.5 18 432-449 57-74 (90)
335 1rw1_A Conserved hypothetical 41.2 18 0.00061 29.7 3.2 21 69-89 2-22 (114)
336 2hl7_A Cytochrome C-type bioge 41.1 18 0.00062 28.4 2.9 17 432-448 60-76 (84)
337 1z3e_A Regulatory protein SPX; 40.1 19 0.00065 30.4 3.2 21 69-89 3-23 (132)
338 3fz5_A Possible 2-hydroxychrom 38.7 19 0.00065 32.5 3.2 38 117-172 162-199 (202)
339 2kok_A Arsenate reductase; bru 36.8 23 0.00078 29.3 3.2 21 69-89 7-27 (120)
340 3l78_A Regulatory protein SPX; 31.7 31 0.0011 28.5 3.2 21 69-89 2-22 (120)
341 2g2q_A Glutaredoxin-2; thiored 30.7 29 0.001 28.9 2.7 36 66-112 2-37 (124)
342 2lvu_A Zinc finger and BTB dom 35.4 11 0.00039 20.8 0.0 13 347-359 3-15 (26)
343 1zza_A Stannin, AG8_1; helix, 27.8 34 0.0012 25.8 2.3 30 468-500 5-34 (90)
344 1un2_A DSBA, thiol-disulfide i 27.7 29 0.001 31.4 2.5 19 116-134 38-56 (197)
345 3kzq_A Putative uncharacterize 26.7 74 0.0025 28.5 5.1 28 68-95 4-31 (208)
346 3fz4_A Putative arsenate reduc 25.9 45 0.0016 27.6 3.2 21 69-89 5-25 (120)
347 2l9u_A Receptor tyrosine-prote 24.7 37 0.0013 21.7 1.7 23 479-505 11-33 (40)
348 2in3_A Hypothetical protein; D 24.6 65 0.0022 28.8 4.3 27 67-93 8-34 (216)
349 3irb_A Uncharacterized protein 23.7 12 0.00042 32.4 -0.9 17 404-420 55-71 (145)
350 1r4w_A Glutathione S-transfera 22.2 55 0.0019 29.9 3.3 40 115-170 169-210 (226)
351 3gkx_A Putative ARSC family re 22.2 49 0.0017 27.4 2.6 21 69-89 6-26 (120)
352 2lvt_A Zinc finger and BTB dom 27.2 19 0.00066 20.3 0.0 13 347-359 3-15 (29)
353 3p0k_A Sulfhydryl oxidase; 4-h 21.4 37 0.0013 32.1 1.8 43 316-358 110-165 (266)
354 2lvr_A Zinc finger and BTB dom 25.5 22 0.00075 20.1 0.0 13 347-359 4-16 (30)
No 1
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=100.00 E-value=4e-77 Score=629.56 Aligned_cols=382 Identities=25% Similarity=0.432 Sum_probs=280.5
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCC-CCCCeEEEEEEeccccccHHHHH
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNA-AHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~-~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
....++.++.++|++.+...+++++||+|||+||++|+.+.|.|+++++.+.+... ...+.+.|+.|||+ +++++|+
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~ 98 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCR 98 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHH
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHH
Confidence 45678999999999988765568899999999999999999999999999864220 00025999999994 6799999
Q ss_pred hCCCCccCeEEEecCCcccCC-CCCCCccccchhhccccCCHHHHHHHHH----Hhc-----------ccCCCCCccccc
Q 010178 123 KFSVGHYPMLLWGSPSKFVAG-SWEPNQEKKEIRALEDWQTADGLLTWIN----KQT-----------SRSYGLDDEKFE 186 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~-~~~~~~~~~~v~~~~G~~~~e~L~~~i~----~~l-----------~~~~~l~~~~~~ 186 (516)
+|+|+++||+++|.+|..... ..........+..+....+.++|...++ +++ +..+.|++++.+
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~~~~~~~~~e~c~~~~~~l~~~k~e 178 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKHMVVDDSLKERCIDMHFKLYTSKEE 178 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhccccCCccccchhhceecccccchh
Confidence 999999999999975532110 0000001111222333455555555444 443 333445555544
Q ss_pred cc--cCCCCCCCccchh--hhh--hhhhhhhhHHHHH-HHhhhccchhhHHHHHHHHHHHHHhcCCccccchhHHHHHhh
Q 010178 187 NE--QLPSNISDPGQIA--RAV--YDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNF 259 (516)
Q Consensus 187 ~~--~~~~~~~~~~~~~--~~~--~Dle~a~~~a~~~-~l~~~~l~ge~l~aL~~Fl~vl~~~~P~~~~r~~~~~lL~~l 259 (516)
++ .+.. +.+....+ ..+ .|+|+|+.++|+. +..+++|+|+++.||++|+.+|+++||++. ...+|..+
T Consensus 179 ~~~~~~~~-~~~~~~~~~~s~~y~~Dle~al~~~L~~ev~~~~~~~g~~l~al~~fl~~l~~~~P~~~----~~~~~~~l 253 (470)
T 3qcp_A 179 LVKRSVSS-TDESGRFVETTELYATDIAGAFFSAMHYDVSLVGTEPRERLTALEDFVLLVKDSLPSIG----ADGVVSAL 253 (470)
T ss_dssp HHHTTC--------CCCCCCSCCHHHHHHHHHHHHHTHHHHHCSCSHHHHHHHHHHHHHHHHHSTTSS----HHHHHHHH
T ss_pred hhhhhccc-ccccccccchhhehHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCCCcc----HHHHHHHH
Confidence 32 1111 11111000 112 4999999999885 456788999999999999999999999852 12355555
Q ss_pred hhcCCCCccchhhHHHhhccCCCCCCCcCcCCCCCCCC-CceeccCCCCCcCcccccHHHHHHHHhccCCCCCCHHHHHH
Q 010178 260 DDFSPSHMQSADKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDGESQFTFTA 338 (516)
Q Consensus 260 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~lfH~ltv~~~~~~~~~~~~~ 338 (516)
..++....+.. +++.. .+.+..+++..+|++ +|++|+||+|++||||||||+|||+|||++|+ .+.++.+
T Consensus 254 ~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~w~~C~gs~~~~rg~~CslW~l~Htlt~~~~~--~~~~~~~ 324 (470)
T 3qcp_A 254 ESITAERPFTV--ASWQD-----AVVKSGIPFDGSPRNVRWRTCRGSSPQYRGFPCGMWLLLHALTVNTPA--DRNVLEV 324 (470)
T ss_dssp HTCCSSSCCCH--HHHHH-----HHHHTCCCCSEETTEECCSTTCCSSTTSSSHHHHHHHHHHHHHHHCCT--TCCHHHH
T ss_pred HHHhhcCCCCH--HHHHH-----HHHhccCCcCCCCCCCcccccCCCCCccCCcCchHHHHHHHHHhhCCC--ChHHHHH
Confidence 44333333321 22211 111224555556776 89999999999999999999999999999998 4778999
Q ss_pred HHHHhHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhccccccccCCCCCCCCCCCCCCCCCChhhhc
Q 010178 339 VCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYR 418 (516)
Q Consensus 339 ~~~~v~~ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~~~~~~~~dp~~pk~~~P~~~~Cp~C~~ 418 (516)
|++||++||||++|++||++|+ +++++++++|||++||+||+||+|++ .||||+|||+|||++++||+||.
T Consensus 325 ~~~~~~~ffpC~~Ca~hF~~~~------~~s~~~~~lWlw~~HN~VN~rL~~~~---~~~dp~fpk~~~P~~~~C~~C~~ 395 (470)
T 3qcp_A 325 IQNYIRYFFSCKECRDHFIQFN------FSPNEDPVLQLWRAHNNVNARLANVK---DGADPLVPKRQFPTLEACTECYD 395 (470)
T ss_dssp HHHHHHHHCSCHHHHHHHTTCC------CCSSSCHHHHHHHHHHHHHHHHTTCC---TTSCTTSCCCCSSCTTTCSSSSC
T ss_pred HHHHHHHccCcHHHHHHHHHHh------ccCHHHHHHHHHHHhCHHHHhcCCCC---CCCCCCCCccCCCCchhChhhhc
Confidence 9999999999999999999986 67899999999999999999999974 79999999999999999999997
Q ss_pred cCCCCCccccCCCCChHHHHHHHHHHhCCC--ccccccccccc
Q 010178 419 SHHHGDMKFRQIDWDQDEVFKFLTNYYGNT--LVSLYKDREFL 459 (516)
Q Consensus 419 ~~~~~~~~~~~~~w~~~~V~~fL~~~Y~~~--~~~~~~~~~~~ 459 (516)
.. +.|||++||+||++||+.+ +++.+++.+.+
T Consensus 396 ~~---------~~w~~~~v~~~l~~~y~~~~~~~~~~~~~~~~ 429 (470)
T 3qcp_A 396 GA---------GNFIEAHVTGFLKQRYLWDPKAVGLMESNDDL 429 (470)
T ss_dssp SS---------SSCCTTHHHHHHHHHTCCCHHHHSSCCCGGGG
T ss_pred CC---------CCCCHHHHHHHHHHHhCCCcchhhhhcccCCc
Confidence 42 4799999999999999965 67778777764
No 2
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=100.00 E-value=7e-76 Score=634.27 Aligned_cols=375 Identities=23% Similarity=0.452 Sum_probs=289.2
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+.+.++++++|+..+.+. +++++|+|||+||++|++++|.|+++++++.+++ ..+.|+.|||+.+++.++|+
T Consensus 9 ~~~~~V~~Lt~~~f~~~v~~~-~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~----~~v~~~~VD~d~d~~~~l~~ 83 (519)
T 3t58_A 9 SSSDPLTLLDADSVRPTVLGS-SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWR----PALNLAVLDCAEETNSAVCR 83 (519)
T ss_dssp CTTSSSEEECTTTHHHHHSSC-SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGT----TTEEEEEEETTSGGGHHHHH
T ss_pred CCCCCcEECChHHHHHHHHhC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcC----CcEEEEEEECCccccHHHHH
Confidence 346679999999999988764 4889999999999999999999999999997533 36999999998778999999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCCC-----------CCc---------
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYG-----------LDD--------- 182 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~~-----------l~~--------- 182 (516)
+|+|+++||+++|.+|+..+ ..+..+.|+++.+.|.++|.+.+..... ++.
T Consensus 84 ~~~V~~~PTl~~f~~g~~~G---------~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~ 154 (519)
T 3t58_A 84 EFNIAGFPTVRFFQAFTKNG---------SGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTR 154 (519)
T ss_dssp HTTCCSBSEEEEECTTCCSC---------CCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGS
T ss_pred HcCCcccCEEEEEcCcccCC---------CceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhcc
Confidence 99999999999998764321 2234456778999999988887653221 000
Q ss_pred --cccc-------------------------------c-----------ccCC------CC---------CCC-------
Q 010178 183 --EKFE-------------------------------N-----------EQLP------SN---------ISD------- 196 (516)
Q Consensus 183 --~~~~-------------------------------~-----------~~~~------~~---------~~~------- 196 (516)
..+. + ...| ++ ...
T Consensus 155 ~~~~~vallF~~~~s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~ 234 (519)
T 3t58_A 155 NKADYLALVFEREDSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSY 234 (519)
T ss_dssp CCCSEEEEEEECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHH
T ss_pred CCCCeEEEEecCCchHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHH
Confidence 0000 0 0000 00 000
Q ss_pred -----------------c---cch---h------hhh--hhhhhhhhHHHHH-HHhhhccchhhHHHHHHHHHHHHHhcC
Q 010178 197 -----------------P---GQI---A------RAV--YDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHP 244 (516)
Q Consensus 197 -----------------~---~~~---~------~~~--~Dle~a~~~a~~~-~l~~~~l~ge~l~aL~~Fl~vl~~~~P 244 (516)
+ +.+ + ..+ .|||+|++++|+. +..+++|+|+++.||++|+.+|+++||
T Consensus 235 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Dle~al~~~l~~ev~~~~~~~g~~l~al~~~~~~l~~~~P 314 (519)
T 3t58_A 235 LRGLPGLTRDAPPTTATPVTADKIAPTVWKFADRSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAKYFP 314 (519)
T ss_dssp HTTSTTCCCCCCC----------CCCCHHHHSCTTCEEHHHHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHccCCCCCCCCCCCCCCccccccchhhhhccccceeHHHHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHCC
Confidence 0 000 0 012 3999998888874 556789999999999999999999999
Q ss_pred CccccchhHHHHHhhhhcCCC---CccchhhHHHhhccCCCCCCCcCcCCCCCCCC-CceeccCCCCCcCcccccHHHHH
Q 010178 245 SRRCRKGSAKVLVNFDDFSPS---HMQSADKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLL 320 (516)
Q Consensus 245 ~~~~r~~~~~lL~~l~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~lf 320 (516)
++. ...++|..+.+++.. ..... +++... +++. ..|.++|.+ +|++|+||+|++||||||||+||
T Consensus 315 ~~~---~~~~~l~~l~~~l~~~~~~~~~~--~~~~~~-----~~~~-~~~~~~~~~~~w~~C~gs~~~~rg~~C~lW~l~ 383 (519)
T 3t58_A 315 GQP---LVQNFLHSINDWLQKQQKKRIPY--SFFKAA-----LDSR-KEDAVLTEKVNWVGCQGSEPHFRGFPCSLWVLF 383 (519)
T ss_dssp CCH---HHHHHHHHHHHHHHHCCCSEEEH--HHHHHH-----HHHT-THHHHTCSSCCCSTTBCSSTTSBSHHHHHHHHH
T ss_pred Cch---HHHHHHHHHHHHHHhcccccCCH--HHHHHH-----HHhc-ccCCcCCCCCCcccCCCCCcccCCcCcHHHHHH
Confidence 964 345566555543321 22111 122111 1111 125456765 99999999999999999999999
Q ss_pred HHHhccCCCC---------CCHHHHHHHHHHhHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 010178 321 HSLSVRIDDG---------ESQFTFTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (516)
Q Consensus 321 H~ltv~~~~~---------~~~~~~~~~~~~v~~ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (516)
|+|||++|+. +++.++.+|++||++||||++|++||++|+.+.+++++|++++++|||++||+||+||+|+
T Consensus 384 Htltv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ff~C~~Ca~hF~~~~~~~~~~v~s~~~~~~Wlw~~HN~VN~rL~~~ 463 (519)
T 3t58_A 384 HFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFFFGCRDSADHFEQMAAASMHQVRSPSNAILWLWTSHNRVNARLSGA 463 (519)
T ss_dssp HHHHHHHHHHHHTSTTSCCCSCHHHHHHHHHHHHHCSBHHHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHccCccCCccccccccchHHHHHHHHHHHHHCCCchHHHHHHHHHHhhCCCcCCCHHHHHHHHHHhhCHHHhhcCCC
Confidence 9999999753 4568999999999999999999999999999989999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCChhhhccCCCCCccccCCCCChHHHHHHHHHHhCCCccc
Q 010178 392 EASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQIDWDQDEVFKFLTNYYGNTLVS 451 (516)
Q Consensus 392 ~~~~~~~dp~~pk~~~P~~~~Cp~C~~~~~~~~~~~~~~~w~~~~V~~fL~~~Y~~~~~~ 451 (516)
++|||+|||+|||++++||.||.+++.+ .++||+++||+||++|||+++++
T Consensus 464 ----~~~dp~f~k~q~P~~~~C~~C~~~~~~~-----~~~w~~~~v~~fl~~~y~~~n~~ 514 (519)
T 3t58_A 464 ----LSEDPHFPKVQWPPRELCSACHNELNGQ-----VPLWDLGATLNFLKAHFSPANIV 514 (519)
T ss_dssp ----TTCCTTSCCCSSSCTTTCSTTBCSCTTS-----CCCBCHHHHHHHHHHHTSGGGEE
T ss_pred ----CCCCCCCCccCCCCchhChhhhhcccCC-----cccCCHHHHHHHHHHHcCccccc
Confidence 8999999999999999999999876322 46899999999999999999875
No 3
>3llk_A Sulfhydryl oxidase 1; disulfide, flavin adenine dinucleotide, alternative splicing, FAD, flavoprotein, glycoprotein, GOLG apparatus, membrane; HET: FAD FLC; 2.00A {Homo sapiens} PDB: 3lli_A*
Probab=100.00 E-value=2.2e-64 Score=489.86 Aligned_cols=226 Identities=29% Similarity=0.599 Sum_probs=185.7
Q ss_pred hhhhhhhhHHHHH-HHhhhccchhhHHHHHHHHHHHHHhcCCccccchhHHHHHhhhhcCC---CCccchhhHHHhhccC
Q 010178 205 YDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNFDDFSP---SHMQSADKQEVVNNNG 280 (516)
Q Consensus 205 ~Dle~a~~~a~~~-~l~~~~l~ge~l~aL~~Fl~vl~~~~P~~~~r~~~~~lL~~l~~~~~---~~~~~~~~~e~~~~~~ 280 (516)
.|||+|+.++++. +..+++|+|+++.||++|+.+|+++||++. ...++|..+.+... ...... +++.+.
T Consensus 17 aDLe~al~~~L~~Ev~~~~~i~g~~l~AL~~fl~vl~~~~P~~~---~~~~~l~~l~~~l~~~~~~~i~~--~~~~~~-- 89 (261)
T 3llk_A 17 ADLESALHYILRIEVGRFPVLEGQRLVALKKFVAVLAKYFPGRP---LVQNFLHSVNEWLKRQKRNKIPY--SFFKTA-- 89 (261)
T ss_dssp HHHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHCCSSEEEH--HHHHHH--
T ss_pred HHHHHHHHHHHHHHhcCcCcCCCchhHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHHHHhCcccCCCH--HHHHHH--
Confidence 4999998888874 557789999999999999999999999863 34566655544322 122211 112111
Q ss_pred CCCCCCcCcCCCCCCCC-CceeccCCCCCcCcccccHHHHHHHHhccCCCC---------CCHHHHHHHHHHhHhccCCh
Q 010178 281 KGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDG---------ESQFTFTAVCDFIHNFFVCE 350 (516)
Q Consensus 281 ~~~~~~~~~~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~lfH~ltv~~~~~---------~~~~~~~~~~~~v~~ff~C~ 350 (516)
+++. ..|..++.+ +|++|+||+|++||||||||+|||+|||++++. ++++++.+|++||++||||+
T Consensus 90 ---l~~~-~~~~~~~~~~~WvgC~GS~p~~RGy~CgLW~LFH~LTV~a~~~~~~~~~~~~~~~~vl~ai~~fv~~FypC~ 165 (261)
T 3llk_A 90 ---LDDR-KEGAVLAKKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIRGYVHYFFGCR 165 (261)
T ss_dssp ---HHHT-THHHHTCSSCCCSTTCCSSTTSSSHHHHHHHHHHHHHHHHHCC---------CGGGHHHHHHHHHHHHCSCH
T ss_pred ---HHhh-hccCccCCCCcccccCCCCCccCCcCcHHHHHHHHHHhhhhcccccccccccCHHHHHHHHHHHHHHcCCcH
Confidence 1111 113334554 999999999999999999999999999998654 35679999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhccccccccCCCCCCCCCCCCCCCCCChhhhccCCCCCccccCC
Q 010178 351 ECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQI 430 (516)
Q Consensus 351 ~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~~~~~~~~dp~~pk~~~P~~~~Cp~C~~~~~~~~~~~~~~ 430 (516)
+|++||++|+.+.++++++++++++|||++||+||+||+|+ ++|||+|||+||||+++||+||.++++ .+
T Consensus 166 ~Ca~hF~~~~~~~~~~v~sr~~~~lWLw~~HN~VN~rLag~----~seDP~fpK~qwP~~~~Cp~C~~~~~~------~~ 235 (261)
T 3llk_A 166 DCASHFEQMAAASMHRVGSPNAAVLWLWSSHNRVNARLAGA----PSEDPQFPKVQWPPRELCSACHNERLD------VP 235 (261)
T ss_dssp HHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC----TTSCTTSCCCSSSCTTTCSTTBCCCSS------SC
T ss_pred HHHHHHHHHHhhCCCccCCHHHHHHHHHHhcCHHhhhcCCC----CCCCCCCCccCCCCchhChHHHhccCC------CC
Confidence 99999999999888999999999999999999999999998 899999999999999999999987642 47
Q ss_pred CCChHHHHHHHHHHhCCCccc
Q 010178 431 DWDQDEVFKFLTNYYGNTLVS 451 (516)
Q Consensus 431 ~w~~~~V~~fL~~~Y~~~~~~ 451 (516)
+|||++||+||++|||++++.
T Consensus 236 ~W~~~~Vl~fLk~~y~~~nl~ 256 (261)
T 3llk_A 236 VWDVEATLNFLKAHFSPSNII 256 (261)
T ss_dssp SBCHHHHHHHHHHHTSGGGEE
T ss_pred CCCHHHHHHHHHHHcCccccc
Confidence 899999999999999998754
No 4
>1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase, helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A {Saccharomyces cerevisiae} SCOP: a.24.15.1 PDB: 1jra_A*
Probab=99.94 E-value=1.2e-27 Score=206.28 Aligned_cols=90 Identities=22% Similarity=0.344 Sum_probs=79.4
Q ss_pred CcccccHHHHHHHHhccCCCCCCHH---HHHHHHHHhHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhh
Q 010178 310 RGFSCGLWVLLHSLSVRIDDGESQF---TFTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNE 386 (516)
Q Consensus 310 Rgy~CglW~lfH~ltv~~~~~~~~~---~~~~~~~~v~~ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~ 386 (516)
..+-||+|+|||+|||++|+.|+.. ++..|..++.+||||.+||+||.+|+.+.+++++|++++++|||++||.||+
T Consensus 9 ~~lG~s~W~llHtlaa~~p~~pt~~~~~~l~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~VN~ 88 (117)
T 1jr8_A 9 KEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNE 88 (117)
T ss_dssp HHHHHHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3456999999999999999998754 5666667777899999999999999999999999999999999999999999
Q ss_pred hccccccccCCCC
Q 010178 387 RLMKLEASLKTGD 399 (516)
Q Consensus 387 rl~~~~~~~~~~d 399 (516)
||+|++++|..-+
T Consensus 89 rL~kp~f~c~~~~ 101 (117)
T 1jr8_A 89 YLKKDIYDCATIL 101 (117)
T ss_dssp HTTCCCCCCTTHH
T ss_pred HhCCCCcCHHHHH
Confidence 9999887776433
No 5
>2hj3_A Sulfhydryl oxidase ERV1P; four-helix bundle, flavin adenine dinucleotide, oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana}
Probab=99.94 E-value=2.1e-27 Score=206.82 Aligned_cols=105 Identities=22% Similarity=0.472 Sum_probs=82.9
Q ss_pred CcCcccccHHHHHHHHhccCCCCCCHHH---HHHHHHHhHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhh
Q 010178 308 DTRGFSCGLWVLLHSLSVRIDDGESQFT---FTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQV 384 (516)
Q Consensus 308 ~~Rgy~CglW~lfH~ltv~~~~~~~~~~---~~~~~~~v~~ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~V 384 (516)
....+.||+|+|||+||+++|+.|+... +..+..++.+||||.+||+||++|+.+.+++|+|++++++|||++||+|
T Consensus 9 ~~~~lG~slW~llHtlaa~yp~~pt~~~~~~~~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~V 88 (125)
T 2hj3_A 9 TKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTV 88 (125)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHH
T ss_pred CccccCcchhHHHHHHHhhCcCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 4457889999999999999999998764 4444446678999999999999999999999999999999999999999
Q ss_pred hhhccccccccCCCCCCCCCCCCCCCCCC
Q 010178 385 NERLMKLEASLKTGDPKFPKIIWPPKQLC 413 (516)
Q Consensus 385 N~rl~~~~~~~~~~dp~~pk~~~P~~~~C 413 (516)
|+||+|++|+|..-+.++-.- |+....|
T Consensus 89 N~rL~Kp~f~c~~~~~rw~~g-~~d~~~c 116 (125)
T 2hj3_A 89 NRSLGKLVFPCERVDARWGKL-ECEQKSC 116 (125)
T ss_dssp HHHTTCCCCCTTSHHHHCC----------
T ss_pred HHhhCCCCCCHHHHHHHhccC-CCCCCCc
Confidence 999999877776655555433 5544444
No 6
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=99.91 E-value=3.4e-25 Score=190.28 Aligned_cols=78 Identities=14% Similarity=0.361 Sum_probs=73.7
Q ss_pred ccHHHHHHHHhccCCCCCCHHHHHHHHHHhH---hccCChHHHHHHHHHHhcCC----CC-CCChhHHHHHHHHhhhhhh
Q 010178 314 CGLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVT----SP-FNKTRDFALWLWSTHNQVN 385 (516)
Q Consensus 314 CglW~lfH~ltv~~~~~~~~~~~~~~~~~v~---~ff~C~~C~~hf~~~~~~~~----~~-~~~~~~~~lWlw~~HN~VN 385 (516)
-++|+|||+||+++|+.|+....++|++||. +||||.+|++||++|+.+.+ ++ ++|++++++|||++||+||
T Consensus 11 rs~W~llHt~aa~~p~~pt~~~~~~~~~fi~~~~~~yPC~~Ca~hf~~~~~~~p~~~~~~~v~sr~~~~~Wlc~~HN~VN 90 (114)
T 3gwn_A 11 TAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVN 90 (114)
T ss_dssp HHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHTTSGGGCCCGGGGSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCcCCccccCCHHHHHHHHHHHHhHHH
Confidence 3689999999999999999999999999998 56999999999999999888 78 9999999999999999999
Q ss_pred hhcccc
Q 010178 386 ERLMKL 391 (516)
Q Consensus 386 ~rl~~~ 391 (516)
+||+|+
T Consensus 91 ~rLgKp 96 (114)
T 3gwn_A 91 NKLEVD 96 (114)
T ss_dssp HHTTCC
T ss_pred HHhCCC
Confidence 999995
No 7
>3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V}
Probab=99.91 E-value=1.1e-24 Score=184.44 Aligned_cols=83 Identities=27% Similarity=0.452 Sum_probs=71.9
Q ss_pred cHHHHHHHHhccCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 010178 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (516)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (516)
++|+|||+||+++|+.|+......++.|+.. +|||.+|++||.+++.+.++++.+++++++|||++||+||+||+|+
T Consensus 10 a~W~llHt~aa~yP~~Pt~~~~~~~~~~i~~f~~~yPC~~Ca~hf~~~~~~~p~~~~s~~~~~lWlc~~HN~VN~rLgKp 89 (106)
T 3gwl_A 10 KYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIESLPCTRCQHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNNRLNKK 89 (106)
T ss_dssp HHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCccChHHHHHHHHHHHhHHHHhhCCC
Confidence 5899999999999999998555444444443 3999999999999999998888899999999999999999999998
Q ss_pred ccccCC
Q 010178 392 EASLKT 397 (516)
Q Consensus 392 ~~~~~~ 397 (516)
+|+|..
T Consensus 90 ~fdc~~ 95 (106)
T 3gwl_A 90 IISWSE 95 (106)
T ss_dssp CCCHHH
T ss_pred CCCHHH
Confidence 877654
No 8
>4e0h_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; four-helix bundle, flavin-linked sulfhydryl oxidase, FAD BIN oxidation; HET: FAD; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7e-23 Score=174.03 Aligned_cols=80 Identities=20% Similarity=0.459 Sum_probs=74.4
Q ss_pred cHHHHHHHHhccCCCCCCHHHHHHHHHHhH---hccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 010178 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (516)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~---~ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (516)
+.|++||+||+++|+.|+......+++||. +||||.+||+||.+++.+.++.++|++++++|||++||.||+||+|+
T Consensus 10 ~~W~~lHtia~~yP~~pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~p~~~~sr~~l~~Wl~~~HN~VN~rLgKp 89 (106)
T 4e0h_A 10 SSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKP 89 (106)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 369999999999999999999999999998 57999999999999999999999999999999999999999999995
Q ss_pred ccc
Q 010178 392 EAS 394 (516)
Q Consensus 392 ~~~ 394 (516)
+++
T Consensus 90 ~f~ 92 (106)
T 4e0h_A 90 KFD 92 (106)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 9
>3u5s_A FAD-linked sulfhydryl oxidase ALR; flavin, liver, oxidoreductase; HET: FAD; 1.50A {Homo sapiens} PDB: 3mbg_A* 3tk0_A* 3o55_A* 3u2m_A* 3u2l_A* 3r7c_A* 1oqc_A*
Probab=99.86 E-value=5.8e-22 Score=172.90 Aligned_cols=83 Identities=24% Similarity=0.379 Sum_probs=76.7
Q ss_pred cHHHHHHHHhccCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 010178 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (516)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (516)
+.|+|||+||++||+.|+......|++||.. ||||.+|++||.+++.+.++.++|++++++|||.+||.||+||+|+
T Consensus 26 atW~~LHtia~~yP~~Pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~pp~l~SR~~l~~Wl~~~HN~VN~rLgKp 105 (126)
T 3u5s_A 26 HSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPXEEXAEDLRKRLARNHPDTRTRAAFTQWLXHLHNEVNRKLGKP 105 (126)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 3599999999999999999999999999996 5999999999999999999999999999999999999999999997
Q ss_pred ccccCC
Q 010178 392 EASLKT 397 (516)
Q Consensus 392 ~~~~~~ 397 (516)
++++..
T Consensus 106 ~fd~~~ 111 (126)
T 3u5s_A 106 DFDXSK 111 (126)
T ss_dssp CCCGGG
T ss_pred CCCHHH
Confidence 665543
No 10
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.82 E-value=4.7e-20 Score=156.74 Aligned_cols=98 Identities=19% Similarity=0.503 Sum_probs=85.9
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCe
Q 010178 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (516)
Q Consensus 52 ~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PT 131 (516)
+.++|++.+.+..+++++|+|||+||+||+.+.|.++++++.+. .+.++.||+ +++++++++|+|+++||
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--d~~~~l~~~~~V~~~PT 76 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--------DVVFLKVDV--DECEDIAQDNQIACMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEET--TTCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--------CeEEEEEec--ccCHHHHHHcCCCeecE
Confidence 45789999988777999999999999999999999999999874 388999998 57899999999999999
Q ss_pred EEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHh
Q 010178 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (516)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~ 173 (516)
+++|++|+ .+..+.| .+.+.|.++|+++
T Consensus 77 ~~~~~~G~-------------~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 77 FLFMKNGQ-------------KLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEETTE-------------EEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEECCE-------------EEEEEeC-cCHHHHHHHHHhc
Confidence 99998874 3455677 6899999999875
No 11
>4e0i_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; flavin-linked sulfhydryl oxidase, MIA40, oxidation, mitochon intermembrane space; HET: FAD; 3.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.6e-20 Score=174.26 Aligned_cols=84 Identities=18% Similarity=0.372 Sum_probs=77.1
Q ss_pred ccccHHHHHHHHhccCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhc
Q 010178 312 FSCGLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERL 388 (516)
Q Consensus 312 y~CglW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl 388 (516)
.=-+.|+|||+|+++||+.|+......+++||.. ||||.+|++||.+++.+.++.++|++++++|||.+||.||+||
T Consensus 90 lGp~~W~~LHTiA~~YP~~Pt~~~k~~~~~Fi~~l~~~lPC~~C~~hf~~~lk~~pp~l~SR~~l~~Wl~~~HN~VN~rL 169 (189)
T 4e0i_A 90 LGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWSAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKL 169 (189)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHc
Confidence 3456899999999999999999999999999995 6999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 010178 389 MKLEASL 395 (516)
Q Consensus 389 ~~~~~~~ 395 (516)
+|.+|+|
T Consensus 170 gKp~fdc 176 (189)
T 4e0i_A 170 RKPKFDC 176 (189)
T ss_dssp TCCCCCG
T ss_pred CCCCCCH
Confidence 9965544
No 12
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.81 E-value=2.8e-19 Score=156.24 Aligned_cols=114 Identities=11% Similarity=0.197 Sum_probs=95.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
.++.+..|++++|++.+.+. ++++||+|||+||++|+.+.|.|+++++.+.... ..+.+.++.|||+ ++.++|++
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~--~~~~v~~~~vd~~--~~~~l~~~ 87 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDP-EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKR--NHLTFVAARIDGE--KYPDVIER 87 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTST--TTTTEEEEEEETT--TCHHHHHH
T ss_pred CCCceEECChhhHHHHHhCC-CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcc--cCCCeEEEEEEcc--ccHhHHHh
Confidence 45679999999999998753 5899999999999999999999999999875321 1256999999994 68999999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHh
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~ 173 (516)
|+|+++||+++|++|... ....|.|.++.+.|.+||.++
T Consensus 88 ~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 88 MRVSGFPTMRYYTRIDKQ-----------EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TTCCSSSEEEEECSSCSS-----------SCEECCSCCCHHHHHHHHHHH
T ss_pred cCCccCCEEEEEeCCCCC-----------CceEecCCccHHHHHHHHHhc
Confidence 999999999999876321 114578999999999999875
No 13
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.79 E-value=1.1e-18 Score=161.75 Aligned_cols=133 Identities=14% Similarity=0.256 Sum_probs=102.3
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEec-------CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFA-------NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN 117 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA-------~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~ 117 (516)
.+.++.||+++|++.+...++.++||+||| +|||+|+.+.|+|+++|+++....+. +.+.|++||+ +++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~--~~v~f~kvD~--d~~ 92 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQ--SLNLFFTVDV--NEV 92 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTT--CCEEEEEEET--TTC
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCC--CCEEEEEEEC--ccC
Confidence 467999999999998876666789999999 49999999999999999998521110 3699999998 579
Q ss_pred HHHHHhCCCCccCeEEEecCCcccC---CCCCCCccccchhhccc-cCCHHHHHHHHHHhcccCCCCCc
Q 010178 118 TNLCDKFSVGHYPMLLWGSPSKFVA---GSWEPNQEKKEIRALED-WQTADGLLTWINKQTSRSYGLDD 182 (516)
Q Consensus 118 ~~l~~~~~I~~~PTl~~f~~g~~~~---~~~~~~~~~~~v~~~~G-~~~~e~L~~~i~~~l~~~~~l~~ 182 (516)
++++++|||+++||+++|++|.... ..+.. .....+....| +++++.|.+||.++++..+.|..
T Consensus 93 ~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~-~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~r 160 (178)
T 3ga4_A 93 PQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKT-SPFYQYSLVPENAENTLQFGDFLAKILNISITVPQ 160 (178)
T ss_dssp HHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTT-SCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCC
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCCCcccccccc-CCcceeecccCCCcCHHHHHHHHHHhcCCCccccC
Confidence 9999999999999999999885432 11111 01111222235 89999999999999997766543
No 14
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.75 E-value=7.3e-18 Score=142.72 Aligned_cols=107 Identities=17% Similarity=0.249 Sum_probs=93.2
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
..+..++.++|++.+.+. +++++|.|||+||++|+.+.|.++++++.+. +.+.++.||+ +++++++++|+
T Consensus 4 ~~v~~l~~~~~~~~~~~~-~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~v~~~~vd~--~~~~~l~~~~~ 73 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDE-GKACLVMFSRKNCHVCQKVTPVLEELRLNYE-------ESFGFYYVDV--EEEKTLFQRFS 73 (111)
T ss_dssp CCSEECCHHHHHHHHTTS-CCCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHHHTT
T ss_pred CcceecCHHHHHHHHHhc-CCEEEEEEeCCCChhHHHHHHHHHHHHHHcC-------CceEEEEEEC--CcChhHHHhcC
Confidence 458899999999999543 4889999999999999999999999999986 3589999998 46899999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|.++||+++|++|+ .+..+.|..+.+.|.++|++.++
T Consensus 74 v~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 74 LKGVPQILYFKDGE-------------YKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp CCSSCEEEEEETTE-------------EEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCcCCEEEEEECCE-------------EEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999998763 34567899999999999998764
No 15
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.74 E-value=8.9e-18 Score=142.01 Aligned_cols=107 Identities=25% Similarity=0.512 Sum_probs=91.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.+..++.++|++.+. +++++|+||++||++|+.+.|.++++++.+.... +.+.++.||++ ++.+++++|
T Consensus 4 ~~~v~~l~~~~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~----~~~~~~~vd~~--~~~~l~~~~ 74 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA---EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGL----AGVKIAEVDCT--AERNICSKY 74 (111)
T ss_dssp -CCSEECCTTTHHHHHH---SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-----CCEEEEEEETT--TCHHHHHHT
T ss_pred CCcceEcChhhHHHHhc---CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccC----CceEEEEEecc--ccHhHHHhc
Confidence 35689999999999998 3789999999999999999999999999875432 35999999984 688999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHh
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~ 173 (516)
+|.++||+++|++|+ .+..+.|..+.+.|.+||.++
T Consensus 75 ~v~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 75 SVRGYPTLLLFRGGK-------------KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEECSCCSHHHHHHHHHHH
T ss_pred CCCcccEEEEEeCCc-------------EEEeccCCcCHHHHHHHHHhc
Confidence 999999999998773 345678999999999999875
No 16
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.74 E-value=3.9e-18 Score=153.46 Aligned_cols=112 Identities=12% Similarity=0.132 Sum_probs=90.1
Q ss_pred ceecC-cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 48 AVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 48 v~~L~-~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
+..++ .++|++.+.+..+++|||+|||+|||||+.+.|.++++|+++. +.+.|+.||. |++++++.+|+|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-------~~v~f~kVDV--De~~e~a~~y~V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIK-------NFCVIYLVDI--TEVPDFNTMYEL 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--TTCCTTTTTTTC
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHcc-------CCcEEEEEEC--CCCHHHHHHcCC
Confidence 44554 5889988864345899999999999999999999999999996 4589999997 579999999999
Q ss_pred CccCeEEEecCCccc--C-CCCCCCccccchhhccccCC-HHHHHHHHHHhcc
Q 010178 127 GHYPMLLWGSPSKFV--A-GSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 175 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~--~-~~~~~~~~~~~v~~~~G~~~-~e~L~~~i~~~l~ 175 (516)
+++||+++|.+|+.. . |. + ....+.|..+ .++|+++|++.+.
T Consensus 94 ~siPT~~fFk~G~~v~vd~Gt------g-d~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 94 YDPVSVMFFYRNKHMMIDLGT------G-NNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp CSSEEEEEEETTEEEEEECSS------S-CCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEEEEEecCC------C-CcCeEEeecCCHHHHHHHHHHHHH
Confidence 999999999888653 1 10 0 1124677776 8999999988763
No 17
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.74 E-value=4.5e-18 Score=150.47 Aligned_cols=106 Identities=15% Similarity=0.250 Sum_probs=93.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCC--hhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWC--PACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC--~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
.....+++++|++.+.+. ++++||+|||+|| |+|+.+.|.+++++++|. +++.|++||. |++++++.+
T Consensus 15 ~g~~~vt~~~F~~~v~~~-~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~-------~~v~~~KVdv--De~~~la~~ 84 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHS-GKIVVLFFRGDAVRFPEAADLAVVLPELINAFP-------GRLVAAEVAA--EAERGLMAR 84 (137)
T ss_dssp --CEEECTTTHHHHHHTS-SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST-------TTEEEEEECG--GGHHHHHHH
T ss_pred cCCcccCHhHHHHHHhcC-CCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc-------CCcEEEEEEC--CCCHHHHHH
Confidence 345689999999998764 3589999999999 999999999999999986 5699999996 679999999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|+|+++||+++|++|+ .+....|..+.+.|.++|++++
T Consensus 85 ygV~siPTlilFkdG~-------------~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 85 FGVAVCPSLAVVQPER-------------TLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HTCCSSSEEEEEECCE-------------EEEEEESCCCHHHHHHHHHHHH
T ss_pred cCCccCCEEEEEECCE-------------EEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999984 3456789999999999999877
No 18
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.74 E-value=4.7e-18 Score=146.33 Aligned_cols=106 Identities=17% Similarity=0.292 Sum_probs=90.5
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.......+.++|++.+.+.++++++|+|||+||++|+.+.|.++++++.+. + +.|+.||+ +++.+++++|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~-v~~~~vd~--d~~~~l~~~~ 80 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-------N-VIFLEVDV--DDCQDVASEC 80 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-------T-SEEEEEET--TTTHHHHHHT
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-CEEEEEEC--CCCHHHHHHc
Confidence 445677889999999986556899999999999999999999999999874 3 89999998 4689999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|.++||+++|++|+. +..+.|. +.+.|.++|++.+
T Consensus 81 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 81 EVKSMPTFQFFKKGQK-------------VGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp TCCSSSEEEEESSSSE-------------EEEEESC-CHHHHHHHHHHHC
T ss_pred CCccccEEEEEeCCeE-------------EEEEcCC-CHHHHHHHHHHhC
Confidence 9999999999977643 3457787 9999999998764
No 19
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.74 E-value=1.2e-17 Score=140.83 Aligned_cols=106 Identities=18% Similarity=0.393 Sum_probs=91.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
+.++.++.++|+..+.+. +++++|+||++||++|+.+.|.++++++.+. +.+.++.||++ ++++++++|+
T Consensus 2 ~~v~~l~~~~f~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~ 71 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAPKYG 71 (108)
T ss_dssp TTEEECCTTTHHHHTTTC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEETT--TCTTHHHHTT
T ss_pred CcceecchhhHHHHHHhc-CCeEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CCcEEEEEECC--CCHHHHHHcC
Confidence 458899999999877543 5889999999999999999999999999986 35999999984 5788999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|.++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 72 v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 72 IRGIPTLLLFKNGE-------------VAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp CCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHH
T ss_pred CcccCEEEEEeCCE-------------EEEEEecCCCHHHHHHHHHHhh
Confidence 99999999997764 3345788899999999998875
No 20
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.74 E-value=7.9e-18 Score=143.68 Aligned_cols=105 Identities=18% Similarity=0.344 Sum_probs=91.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
+++++.++|++.+ .+++++|+|||+||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+|.
T Consensus 3 v~~l~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~~--~~~~l~~~~~v~ 70 (112)
T 2voc_A 3 IVKATDQSFSAET---SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG-------DKLKIVKIDVD--ENQETAGKYGVM 70 (112)
T ss_dssp CEECCTTTHHHHH---SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT-------TTCEEEEEETT--TCCSHHHHTTCC
T ss_pred eEEecHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCcEEEEEECC--CCHHHHHHcCCC
Confidence 6789999999988 35889999999999999999999999999986 34899999984 578899999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
++||+++|++|+ .+..+.|..+.++|.+|+.++++++
T Consensus 71 ~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 71 SIPTLLVLKDGE-------------VVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp SBSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred cccEEEEEeCCE-------------EEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 999999997764 3356789999999999999887653
No 21
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.74 E-value=1.6e-17 Score=139.72 Aligned_cols=106 Identities=30% Similarity=0.524 Sum_probs=93.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.+..++.++|++.+.+ +++++|+||++||++|+.+.|.++++++.+. +.+.++.||+ +++++++++|
T Consensus 3 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~ 71 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRN--NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK-------GKAVFGRLNV--DENQKIADKY 71 (109)
T ss_dssp CCCCEECCTTTHHHHHHH--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHHHT
T ss_pred CCeEEEecHHHHHHHHhc--CCeEEEEEECCCCHHHHhhhHHHHHHHHHhC-------CCceEEEEcc--ccCHHHHHhc
Confidence 456889999999999876 4889999999999999999999999999986 3589999998 4689999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|.++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 72 ~i~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 72 SVLNIPTTLIFVNGQ-------------LVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHC
T ss_pred CcccCCEEEEEcCCc-------------EEEeeeccCCHHHHHHHHHHHh
Confidence 999999999997774 3456789999999999998875
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.73 E-value=1.5e-17 Score=139.33 Aligned_cols=104 Identities=20% Similarity=0.376 Sum_probs=90.7
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
..+.+++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+. +.+.++.||+ +++++++++|+
T Consensus 3 ~~v~~l~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~ 70 (106)
T 3die_A 3 MAIVKVTDADFDSKV---ESGVQLVDFWATACGPCKMIAPVLEELAADYE-------GKADILKLDV--DENPSTAAKYE 70 (106)
T ss_dssp CCCEECCTTTHHHHS---CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTT
T ss_pred cceEECCHHHHHHHh---cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCcEEEEEEC--CcCHHHHHhCC
Confidence 357889999999998 35899999999999999999999999999986 3489999998 46899999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|+++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 71 v~~~Pt~~~~~~G~-------------~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 71 VMSIPTLIVFKDGQ-------------PVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp CCSBSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHTTC
T ss_pred CcccCEEEEEeCCe-------------EEEEEeCCCCHHHHHHHHHHhC
Confidence 99999999998763 3456789999999999998753
No 23
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=1.8e-17 Score=146.76 Aligned_cols=113 Identities=24% Similarity=0.502 Sum_probs=96.9
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
....+..++.++|+..+.+ ++++||+||++||++|+.+.|.|+++++.+.+.+ ..+.++.||++ ++.+++++
T Consensus 15 ~~~~v~~l~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~----~~v~~~~vd~~--~~~~~~~~ 86 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVAD--KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDND----PPIAVAKIDAT--SASMLASK 86 (140)
T ss_dssp EETTEEECCTTTHHHHHTT--CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSS----SCCEEEEECTT--TCHHHHHH
T ss_pred CCCCCEEcChHhHHHHHhc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC----CceEEEEEeCc--ccHHHHHH
Confidence 3456899999999998865 4889999999999999999999999999997532 24899999984 67899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
|+|.++||+++|++|+ +..+.|.++.+.|.+||++.++...
T Consensus 87 ~~v~~~Pt~~~~~~G~--------------~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 87 FDVSGYPTIKILKKGQ--------------AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp TTCCSSSEEEEEETTE--------------EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred CCCCccCeEEEEECCc--------------EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 9999999999997763 2457899999999999999987544
No 24
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.2e-17 Score=168.05 Aligned_cols=130 Identities=22% Similarity=0.424 Sum_probs=103.6
Q ss_pred CccccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHH
Q 010178 41 KKVEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL 120 (516)
Q Consensus 41 ~~~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l 120 (516)
.+.....+++|+.++|++.+.+. ++++||+|||+||++|++++|.|+++++.+. +.+.++.|||+.+++.++
T Consensus 12 ~~~~~~~vv~lt~~~f~~~i~~~-~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~-------~~~~~~~v~~d~~~~~~l 83 (298)
T 3ed3_A 12 FYDSDPHISELTPKSFDKAIHNT-NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD-------GVVQVAAVNCDLNKNKAL 83 (298)
T ss_dssp SCSSCTTCEECCHHHHHHHHTSS-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEETTSTTTHHH
T ss_pred CCCCCCCeEEeCHHHHHHHHHhC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCcEEEEEEccCccCHHH
Confidence 34566789999999999999653 5789999999999999999999999999986 348899999976678999
Q ss_pred HHhCCCCccCeEEEecCCcccCCCCC--C--CccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 121 CDKFSVGHYPMLLWGSPSKFVAGSWE--P--NQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 121 ~~~~~I~~~PTl~~f~~g~~~~~~~~--~--~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
|++|+|.++||+++|.+|++...... + ...+.....|.|.++.+.|++|+.+.++..+
T Consensus 84 ~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v 145 (298)
T 3ed3_A 84 CAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYV 145 (298)
T ss_dssp HHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCE
T ss_pred HHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccccc
Confidence 99999999999999998864211000 0 0001234678999999999999999987544
No 25
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.72 E-value=7.1e-18 Score=144.32 Aligned_cols=116 Identities=27% Similarity=0.562 Sum_probs=96.7
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+.+..++.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+.+.+ ..+.++.+|++ ++..+++
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~----~~v~~~~vd~~--~~~~~~~ 75 (120)
T 1mek_A 4 EEEDHVLVLRKSNFAEALAA--HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEG----SEIRLAKVDAT--EESDLAQ 75 (120)
T ss_dssp CEETTEEECCTTTHHHHHHH--CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTC----CCCBCEEEETT--TCCSSHH
T ss_pred cCCCCcEEechhhHHHHHcc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC----CcEEEEEEcCC--CCHHHHH
Confidence 34567899999999998875 4889999999999999999999999999986532 35889999984 5678999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
+|+|+++||+++|++|+... ...+.|.++.+.|.+||++.++..
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~~-----------~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 76 QYGVRGYPTIKFFRNGDTAS-----------PKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp HHTCCSSSEEEEEESSCSSS-----------CEECCCCSSHHHHHHHHHTTSCCC
T ss_pred HCCCCcccEEEEEeCCCcCC-----------cccccCccCHHHHHHHHHhccCCC
Confidence 99999999999998774321 145778999999999999887653
No 26
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.72 E-value=2.8e-17 Score=139.60 Aligned_cols=107 Identities=21% Similarity=0.423 Sum_probs=90.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
...+..++.++|++.+.+..+++++|+|||+||++|+.+.|.++++++.+. .+.++.||++ +++.+++++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~~-~~~~~~~~~~ 74 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDCN-QENKTLAKEL 74 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS-STTHHHHHHH
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEecC-cchHHHHHHc
Confidence 456889999999999987567899999999999999999999999999985 2889999985 3678999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|+++||++++++|+. +..+.|. +.++|.++|++.+
T Consensus 75 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 75 GIRVVPTFKILKENSV-------------VGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp CCSBSSEEEEESSSSE-------------EEEEESS-CHHHHHHHHHHHH
T ss_pred CCCeeeEEEEEeCCcE-------------EEEEcCC-CHHHHHHHHHHhh
Confidence 9999999999887743 2345676 4889999998764
No 27
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=2.5e-17 Score=143.94 Aligned_cols=111 Identities=19% Similarity=0.399 Sum_probs=94.8
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+.++.++.++|+..+.+. ++++||+||++||++|+.+.|.++++++.+. +.+.|+.||+ +++.++++
T Consensus 14 ~~~~~v~~l~~~~f~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--~~~~~l~~ 83 (130)
T 2dml_A 14 SSSDDVIELTPSNFNREVIQS-DGLWLVEFYAPWCGHCQRLTPEWKKAATALK-------DVVKVGAVNA--DKHQSLGG 83 (130)
T ss_dssp CTTSSSEECCTTTHHHHTTTC-SSCEEEEEECTTCSTTGGGHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcC-CCeEEEEEECCCCHHHHhhCHHHHHHHHHhc-------CceEEEEEeC--CCCHHHHH
Confidence 345678999999999977654 5789999999999999999999999999986 3489999998 46889999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|+|+++||+++|.+|.. .+..+.|.++.++|.++|.+.+.
T Consensus 84 ~~~v~~~Pt~~~~~~~~~------------~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKN------------KPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp HHTCCSSSEEEEESSCTT------------SCEECCSCCSHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCC------------eEEEeecCCCHHHHHHHHHHHHh
Confidence 999999999999987631 23567899999999999998874
No 28
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.72 E-value=3.2e-17 Score=147.03 Aligned_cols=110 Identities=22% Similarity=0.459 Sum_probs=95.9
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
.....+..++.++|++.+. .++++||+|||+||++|+.+.|.|+++++.+. +.+.|+.||+ +++.++++
T Consensus 35 ~~~~~v~~l~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--~~~~~l~~ 103 (148)
T 3p2a_A 35 LFDGEVINATAETLDKLLQ--DDLPMVIDFWAPWCGPCRSFAPIFAETAAERA-------GKVRFVKVNT--EAEPALST 103 (148)
T ss_dssp TTCCCCEECCTTTHHHHTT--CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHH
T ss_pred cccCCceecCHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CceEEEEEEC--cCCHHHHH
Confidence 3456789999999999883 35889999999999999999999999999986 3589999998 46899999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|+|.++||+++|++|+ .+..+.|.++.+.|.+||++.++.
T Consensus 104 ~~~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 104 RFRIRSIPTIMLYRNGK-------------MIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp HTTCCSSSEEEEEETTE-------------EEEEESSCCCHHHHHHHHHHHHHS
T ss_pred HCCCCccCEEEEEECCe-------------EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999999999998774 345678999999999999998864
No 29
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.72 E-value=4.9e-18 Score=150.75 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=93.2
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCC--ChhhhhhhHHHHHHHHHhCCCCCCCCCe-EEEEEEeccccccHHHHHh
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGI-ILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~W--C~~C~~~~P~~~~la~~~~~~~~~~~~~-v~~~~VDc~~d~~~~l~~~ 123 (516)
.+..+++++|++.+.. ++++||+|||+| ||+|+.++|.+++++++|. ++ +.|++||. |++++++.+
T Consensus 18 g~~~~t~~~F~~~v~~--~~~vlVdF~a~~crCgpCk~iaPvleela~e~~-------g~~v~~~KVdv--De~~~lA~~ 86 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQ--APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP-------DYTWQVAIADL--EQSEAIGDR 86 (140)
T ss_dssp TCEECCHHHHHHHHHT--CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT-------TSCCEEEECCH--HHHHHHHHH
T ss_pred CCccCCHHHHHHHHhC--CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC-------CCeEEEEEEEC--CCCHHHHHH
Confidence 4678999999999863 467999999999 9999999999999999986 56 99999996 689999999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|||+++||+++|++|+. +....|..+.+.|.++|++.+.
T Consensus 87 ygV~sIPTlilFk~G~~-------------v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 87 FGAFRFPATLVFTGGNY-------------RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp HTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCccCCEEEEEECCEE-------------EEEEecCCCHHHHHHHHHHHhc
Confidence 99999999999999854 4567899999999999998874
No 30
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.72 E-value=2.6e-17 Score=149.56 Aligned_cols=109 Identities=16% Similarity=0.384 Sum_probs=93.9
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
....+++++.++|++.+. .++++||+|||+||++|+.+.|.|+++++.+. +.+.|+.||+ +++++++++
T Consensus 45 ~~~~~~~l~~~~f~~~~~--~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~-------~~v~~~~vd~--~~~~~l~~~ 113 (155)
T 2ppt_A 45 ITGKVAGIDPAILARAER--DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA-------GQVRLAKIDT--QAHPAVAGR 113 (155)
T ss_dssp CCSSEEECCHHHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--TTSTHHHHH
T ss_pred cCCCCccCCHHHHHHHHh--CCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCEEEEEEeC--CccHHHHHH
Confidence 345678999999999883 35889999999999999999999999999996 3589999998 467899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
|+|+++||+++|++|+ .+..+.|..+.++|.+||++.++.
T Consensus 114 ~~i~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 114 HRIQGIPAFILFHKGR-------------ELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp TTCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHHC-
T ss_pred cCCCcCCEEEEEeCCe-------------EEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999999999998774 335678999999999999998764
No 31
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.72 E-value=2.7e-17 Score=145.90 Aligned_cols=111 Identities=19% Similarity=0.382 Sum_probs=92.2
Q ss_pred cccCcceecCcccHHHHHhcC----------CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 43 VEVDHAVELNATNFDAVLRDT----------PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~----------~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
.....++.++.++|...+.+. +++++||+||++||++|+.+.|.++++++.+. +.+.++.||+
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~ 91 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA-------GKIYIYKVNV 91 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEET
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CceEEEEEEC
Confidence 345678999999999988763 25899999999999999999999999999986 3589999998
Q ss_pred cccccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 113 ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 113 ~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+++.+++++|+|.++||+++|.++. . +..+.|..+.+.|.++|++.+.
T Consensus 92 --~~~~~~~~~~~v~~~Pt~~~~~~~g------------~-~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 92 --DKEPELARDFGIQSIPTIWFVPMKG------------E-PQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp --TTCHHHHHHTTCCSSSEEEEECSSS------------C-CEEEESCCCHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHcCCCCcCEEEEEeCCC------------C-EEEEeCCCCHHHHHHHHHHHHc
Confidence 4688999999999999999985431 1 2357899999999999998775
No 32
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.71 E-value=5e-17 Score=136.43 Aligned_cols=105 Identities=20% Similarity=0.460 Sum_probs=90.6
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
+.++.+++++|+..+.. .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ +++.++++|+
T Consensus 2 ~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~ 71 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLK-ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA-------GKVTVAKVNID--DNPETPNAYQ 71 (107)
T ss_dssp CCEEECCTTTHHHHTTT-CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TSEEEEEEETT--TCCHHHHHTT
T ss_pred CceeecchhhhhHHHHh-CCCEEEEEEECCCChhHHHHhHHHHHHHHHhC-------CcEEEEEEECC--CCHHHHHhcC
Confidence 45889999999988754 35889999999999999999999999999986 35999999984 5788999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHh
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~ 173 (516)
|.++||+++|++|+ .+..+.|..+.+.|.++|++.
T Consensus 72 v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 72 VRSIPTLMLVRDGK-------------VIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp CCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHT
T ss_pred CCccCEEEEEeCCE-------------EEEEecCCCCHHHHHHHHHhc
Confidence 99999999997764 334577889999999999875
No 33
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.71 E-value=3.6e-17 Score=141.24 Aligned_cols=109 Identities=22% Similarity=0.391 Sum_probs=93.8
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
..+.+..+++++|++.+.+. ++++||+||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~-~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~d--~~~~l~~~ 80 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNS-ETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDID--DHTDLAIE 80 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEETT--TTHHHHHH
T ss_pred CceEEEecChhhHHHHHHcC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeCC--CCHHHHHH
Confidence 45678999999999987654 5789999999999999999999999999985 35899999984 67899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+|.++||+++|++|+. +..+.|..+.+.|.++|++.++
T Consensus 81 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 81 YEVSAVPTVLAMKNGDV-------------VDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEeCCcE-------------EEEEcCCCCHHHHHHHHHHHhC
Confidence 99999999999977643 3457788899999999988764
No 34
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.71 E-value=5.4e-17 Score=158.10 Aligned_cols=121 Identities=17% Similarity=0.347 Sum_probs=100.6
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+.+..++.++|+..+.+. +++++|+|||+||++|+++.|.|+++++.+.+++ ..+.|+.|||+.+++.++|+
T Consensus 9 ~~~~~v~~l~~~~f~~~i~~~-~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~~~~~~l~~ 83 (244)
T 3q6o_A 9 SPSDPLTLLQADTVRGAVLGS-RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWR----PALYLAALDCAEETNSAVCR 83 (244)
T ss_dssp CTTSSSEEECTTTHHHHHSSC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGT----TTEEEEEEETTSTTTHHHHH
T ss_pred CCCCCceeCChhhHHHHHhhC-CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhcc----CcEEEEEEeCCchhhHHHHH
Confidence 346779999999999988765 4889999999999999999999999999997532 36999999998778999999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
+|+|+++||+++|.+|+.... +..+ .+.| ++.+.|.++|.+.+...
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~-------g~~~-~~~g-~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 84 DFNIPGFPTVRFFXAFTXNGS-------GAVF-PVAG-ADVQTLRERLIDALESH 129 (244)
T ss_dssp HTTCCSSSEEEEECTTCCSSS-------CEEC-CCTT-CCHHHHHHHHHHHHHTC
T ss_pred HcCCCccCEEEEEeCCCcCCC-------CeeE-ecCC-CCHHHHHHHHHHHHHhc
Confidence 999999999999987643221 1222 4455 79999999999988754
No 35
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=3.1e-17 Score=143.56 Aligned_cols=114 Identities=20% Similarity=0.408 Sum_probs=95.5
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
....+..++.++|+..+.+. ++++||+|||+||++|+.+.|.++++++.+.+.. .+.+.|+.|||+ ++.+++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~---~~~~~~~~vd~~--~~~~l~~~ 78 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDS-EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQT---KGKVKLAAVDAT--VNQVLASR 78 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTS-SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHT---TTSEEEEEEETT--TCCHHHHH
T ss_pred CCCcCEEcCHhhHHHHHhcC-CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhc---CCcEEEEEEECC--CCHHHHHh
Confidence 34568999999999987654 5889999999999999999999999999985100 024999999984 57899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
|+|.++||+++|.+|+ .+..+.|.++.+.|.+||.+.+..
T Consensus 79 ~~v~~~Pt~~~~~~g~-------------~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 79 YGIRGFPTIKIFQKGE-------------SPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp HTCCSSSEEEEEETTE-------------EEEEECSCCSHHHHHHHHHHHHHH
T ss_pred CCCCeeCeEEEEeCCC-------------ceEEecCCCCHHHHHHHHHHHhhc
Confidence 9999999999998763 335678999999999999998764
No 36
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.71 E-value=4.9e-17 Score=137.20 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=85.5
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
+..+ +.++|++.+.+.++++++|+|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--~~~~~~~~~~~v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--------QAVFLEVDV--HQCQGTAATNNI 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHHHTTC
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--------CcEEEEEEC--ccCHHHHHhcCC
Confidence 3444 67899999865456889999999999999999999999999983 389999998 468899999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
.++||+++|++|+. +..+.| .+.++|.++|++.+|
T Consensus 73 ~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 73 SATPTFQFFRNKVR-------------IDQYQG-ADAVGLEEKIKQHLE 107 (107)
T ss_dssp CSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHHC
T ss_pred CcccEEEEEECCeE-------------EEEEeC-CCHHHHHHHHHHhcC
Confidence 99999999987743 345667 455669999988764
No 37
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=2.8e-17 Score=163.59 Aligned_cols=108 Identities=18% Similarity=0.397 Sum_probs=95.8
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.|+.++.++|++.+..+++++++|+|||+||+||+.+.|.|+++++++. +.+.|+.|||+ ++++++++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~ 76 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYN-------GQFILAKLDCD--AEQMIAAQF 76 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT-------SSSEEEEEETT--TCHHHHHTT
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcC-------CCeEEEEEeCc--cCHHHHHHc
Confidence 456899999999998877667999999999999999999999999999996 35899999984 689999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|+++||+++|++|+ .+..+.|..+.+.+..++.+.+
T Consensus 77 ~v~~~Pt~~~~~~G~-------------~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 77 GLRAIPTVYLFQNGQ-------------PVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHS
T ss_pred CCCCCCeEEEEECCE-------------EEEEeeCCCCHHHHHHHHHHHc
Confidence 999999999998774 3456789999999999998876
No 38
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.71 E-value=3.1e-17 Score=137.52 Aligned_cols=103 Identities=19% Similarity=0.422 Sum_probs=87.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
++++++++|+..+.. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|.
T Consensus 2 v~~l~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--~~~~~~~~~~~v~ 70 (105)
T 1nsw_A 2 TMTLTDANFQQAIQG--DGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--DENPETTSQFGIM 70 (105)
T ss_dssp CEEECTTTHHHHHSS--SSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--TTCHHHHHHTTCC
T ss_pred ceeccHHhHHHHHhC--CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--cCCHHHHHHcCCc
Confidence 678999999966654 3789999999999999999999999999985 3489999998 4688999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 71 ~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 71 SIPTLILFKGGR-------------PVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp SSSEEEEEETTE-------------EEEEEESCCCHHHHHHHTTTTT
T ss_pred cccEEEEEeCCe-------------EEEEEecCCCHHHHHHHHHHHh
Confidence 999999997763 3345778899999999987654
No 39
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.71 E-value=6e-17 Score=137.74 Aligned_cols=108 Identities=17% Similarity=0.374 Sum_probs=93.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.+..++.++|+..+.+ .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~~--~~~~~~~~~ 75 (115)
T 1thx_A 6 SKGVITITDAEFESEVLK-AEQPVLVYFWASWCGPCQLMSPLINLAANTYS-------DRLKVVKLEID--PNPTTVKKY 75 (115)
T ss_dssp CCSEEECCGGGHHHHTTT-CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEEST--TCHHHHHHT
T ss_pred cCceEEeeccchhhHhhc-CCceEEEEEECCCCHHHHHhHHHHHHHHHHhC-------CcEEEEEEEcC--CCHHHHHHc
Confidence 345889999999988754 35889999999999999999999999999986 34899999984 688999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|.++||+++|++|+. +..+.|..+.+.|.++|++.++
T Consensus 76 ~v~~~Pt~~~~~~G~~-------------~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 76 KVEGVPALRLVKGEQI-------------LDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCceeEEEEEcCCEE-------------EEEecCCCCHHHHHHHHHHHhc
Confidence 9999999999977643 3457788999999999998875
No 40
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.71 E-value=5.4e-17 Score=137.84 Aligned_cols=107 Identities=16% Similarity=0.325 Sum_probs=91.6
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
..+..++.++|+..+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+
T Consensus 5 ~~v~~l~~~~~~~~~~~~-~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~ 74 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKN-DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG-------DKIEIVKLNI--DENPGTAAKYG 74 (112)
T ss_dssp CCCEEECTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTT
T ss_pred ceEEecchhhHHHHHhhC-CCeEEEEEECCCCHhHHhcCHHHHHHHHHhc-------CCeEEEEEEc--CCCHHHHHhCC
Confidence 347889999999877654 5889999999999999999999999999985 3489999998 46889999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|.++||+++|++|+. +..+.|..+.+.|.++|++.+.
T Consensus 75 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 75 VMSIPTLNVYQGGEV-------------AKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTHHHHC
T ss_pred CCcccEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHhh
Confidence 999999999987743 3457889999999999988763
No 41
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.71 E-value=3.4e-17 Score=143.67 Aligned_cols=107 Identities=17% Similarity=0.351 Sum_probs=91.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.++.++.++|+..+.+ .+++++|+|||+||++|+.+.|.++++++.+. +.+.|+.||++ ++.+++++|
T Consensus 21 ~~~v~~l~~~~f~~~~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~~--~~~~l~~~~ 90 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLK-ADGAILVDFWAEWCGPAKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAPKY 90 (128)
T ss_dssp CCCSEEECTTTHHHHTTT-CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT-------TTEEEEEEETT--TCCTTSGGG
T ss_pred ccccEecChhhHHHHHHh-cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHHc
Confidence 345889999999987754 35899999999999999999999999999986 35999999984 578899999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|.++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 91 ~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 91 GIRGIPTLLLFKNGE-------------VAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCE-------------EEEEEcCCCCHHHHHHHHHHhh
Confidence 999999999997764 3345788999999999998875
No 42
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.71 E-value=6.7e-17 Score=135.77 Aligned_cols=106 Identities=24% Similarity=0.482 Sum_probs=90.5
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
.+++++.++|+..+.. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+|
T Consensus 2 ~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~v 70 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQ--HPLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDVD--ENPKTAMRYRV 70 (109)
T ss_dssp CCEECCTTTHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEETT--TCHHHHHHTTC
T ss_pred cceEccHhHHHHHhcC--CCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEECC--CCHhHHHhCCC
Confidence 4778999999977765 3789999999999999999999999999986 35899999984 68899999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
.++||+++|++|+ .+..+.|..+.++|.++|++.++.
T Consensus 71 ~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 71 MSIPTVILFKDGQ-------------PVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp CSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHTTC--
T ss_pred CcCCEEEEEeCCc-------------EeeeEeCCCCHHHHHHHHHHHhhh
Confidence 9999999997764 334577889999999999988764
No 43
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.71 E-value=3e-17 Score=146.04 Aligned_cols=109 Identities=16% Similarity=0.291 Sum_probs=94.5
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
...+..++.++|++.+.+. ++++||+|||+||++|+.+.|.++++++.+. +.+.|+.||+ +++.+++++|
T Consensus 5 ~~~v~~l~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--~~~~~l~~~~ 74 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDS-KKPVVVMFYSPACPYCKAMEPYFEEYAKEYG-------SSAVFGRINI--ATNPWTAEKY 74 (140)
T ss_dssp TTTEEEECHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEET--TTCHHHHHHH
T ss_pred CcceEEcchHhHHHHHHhC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhC-------CceEEEEEEC--CcCHhHHHHC
Confidence 4568899999999766654 5889999999999999999999999999996 3589999998 4689999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|.++||+++|++|+ .+..+.|..+.+.|.++|++.+..
T Consensus 75 ~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 75 GVQGTPTFKFFCHGR-------------PVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp TCCEESEEEEEETTE-------------EEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEEeCCc-------------EEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999999999998773 345678999999999999988753
No 44
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.70 E-value=5.4e-17 Score=136.50 Aligned_cols=105 Identities=16% Similarity=0.352 Sum_probs=90.2
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
.+..++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++++++++|+|
T Consensus 2 ~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 71 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLES-SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK-------DKLKCVKLNT--DESPNVASEYGI 71 (107)
T ss_dssp CCEEECHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHHTC
T ss_pred ccEeccHHHHHHHHhcC-CCcEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CceEEEEEEC--CCCHHHHHHCCC
Confidence 36789999999887654 5889999999999999999999999999986 3489999998 468899999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 72 ~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 72 RSIPTIMVFKGGKK-------------CETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp CSSCEEEEESSSSE-------------EEEEESCCCHHHHHHHHHHHC
T ss_pred CcCCEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 99999999877643 345778899999999998765
No 45
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.70 E-value=5.5e-17 Score=140.08 Aligned_cols=107 Identities=23% Similarity=0.518 Sum_probs=89.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
+.+..++.++|++.+.+. +++++|+|||+||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+
T Consensus 3 ~~v~~l~~~~f~~~~~~~-~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~~ 72 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQG-KTHWVVDFYAPWCGPCQNFAPEFELLARMIK-------GKVRAGKVDCQ--AYPQTCQKAG 72 (122)
T ss_dssp CCSEECCHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEETT--TCHHHHHHTT
T ss_pred cchhcCCHHHHHHHHhcC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeCc--CCHHHHHHcC
Confidence 458899999997766543 5789999999999999999999999999986 35899999984 6889999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhcccc----CCHHHHHHHHHHhcc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~----~~~e~L~~~i~~~l~ 175 (516)
|+++||+++|.+|. .+..+.|. ++.+.|.++|.+.+.
T Consensus 73 v~~~Pt~~~~~~~~-------------~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 73 IKAYPSVKLYQYER-------------AKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp CCSSSEEEEEEEEG-------------GGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CCccceEEEEeCCC-------------ccceeeccccCcCCHHHHHHHHHHHHH
Confidence 99999999997652 13345554 899999999998875
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.70 E-value=8.9e-17 Score=133.66 Aligned_cols=103 Identities=19% Similarity=0.430 Sum_probs=89.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
|++++.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. + +.++.+|++ ++.+++++|+|.
T Consensus 1 V~~l~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~v~~~--~~~~~~~~~~v~ 68 (104)
T 2e0q_A 1 VIHLDSKNFDSFLAS--HEIAVVDFWAEWCAPCLILAPIIEELAEDYP-------Q-VGFGKLNSD--ENPDIAARYGVM 68 (104)
T ss_dssp CEECCTTTHHHHHHH--SSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEETT--TCHHHHHHTTCC
T ss_pred CeecCHHHHHHHHhc--CCcEEEEEECCCChhHHHHhHHHHHHHHHcC-------C-ceEEEEECC--CCHHHHHhCCcc
Confidence 467899999999865 4789999999999999999999999999985 3 899999984 688999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
++||+++|++|+ .+..+.|..+.++|.++|++.++
T Consensus 69 ~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 69 SLPTVIFFKDGE-------------PVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp SSCEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHHT
T ss_pred ccCEEEEEECCe-------------EhhhccCCCCHHHHHHHHHHHhc
Confidence 999999997764 33457888999999999998764
No 47
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=7.5e-17 Score=140.30 Aligned_cols=108 Identities=21% Similarity=0.463 Sum_probs=91.8
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
....++.++.++|++.+.+ .+||+|||+||++|+.+.|.++++++.+.+ ..+.|+.||++ ++.+++++
T Consensus 5 ~~~~v~~l~~~~f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~~--~~~~~~~~ 72 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDVT--EQPGLSGR 72 (126)
T ss_dssp CCCSEEECCTTTHHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEETT--TCHHHHHH
T ss_pred CCCccEEecHHHHHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEECc--CCHHHHHH
Confidence 3456889999999987643 389999999999999999999999999863 24899999984 68899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
|+|.++||+++|++|+ +..+.|.++.++|.++|++.++..
T Consensus 73 ~~v~~~Pt~~~~~~G~--------------~~~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 73 FIINALPTIYHCKDGE--------------FRRYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp TTCCSSSEEEEEETTE--------------EEECCSCCCHHHHHHHHHTCGGGG
T ss_pred cCCcccCEEEEEeCCe--------------EEEeecCCCHHHHHHHHHHHhhcc
Confidence 9999999999997763 245788999999999999887654
No 48
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.70 E-value=1.1e-16 Score=141.47 Aligned_cols=110 Identities=20% Similarity=0.388 Sum_probs=93.5
Q ss_pred cCcceecCcccHHHHHhcC----------CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc
Q 010178 45 VDHAVELNATNFDAVLRDT----------PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL 114 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~----------~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~ 114 (516)
...++.++.++|.+.+.+. .+++++|+|||+||++|+.+.|.++++++.+. +.+.++.||++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~~- 79 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYD-------GQIVIYKVDTE- 79 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT-------TTCEEEEEETT-
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCEEEEEEeCC-
Confidence 3468899999999988752 35789999999999999999999999999986 35899999984
Q ss_pred cccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 115 KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 115 d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
++.+++++|+|.++||+++| ++|+. + .+.|..+.+.|.++|++.++..
T Consensus 80 -~~~~l~~~~~v~~~Pt~~~~~~~G~~-------------~-~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 80 -KEQELAGAFGIRSIPSILFIPMEGKP-------------E-MAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp -TCHHHHHHTTCCSSCEEEEECSSSCC-------------E-EEESCCCHHHHHHHHHHHHTSC
T ss_pred -CCHHHHHHcCCCCCCEEEEECCCCcE-------------E-EEeCCCCHHHHHHHHHHHhhcc
Confidence 67899999999999999999 55532 2 4678999999999999988654
No 49
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.69 E-value=1e-16 Score=138.87 Aligned_cols=107 Identities=21% Similarity=0.463 Sum_probs=90.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
...+..++.++|++.+.+.++++++|+|||+||++|+.+.|.++++++++. .+.++.||++ +++.+++++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~~-~~~~~~~~~~ 87 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDCN-QENKTLAKEL 87 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS-STTHHHHHHH
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEecC-cchHHHHHHc
Confidence 445888999999999886566899999999999999999999999999875 2789999985 3578999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|+++||++++++|+. +..+.|.. .++|.++|++.+
T Consensus 88 ~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 88 GIRVVPTFKILKENSV-------------VGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp CCSSSSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHHHT
T ss_pred CCCeeeEEEEEeCCcE-------------EEEEcCCC-HHHHHHHHHHhh
Confidence 9999999999887743 34466765 889999998754
No 50
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.69 E-value=1.2e-16 Score=133.55 Aligned_cols=104 Identities=15% Similarity=0.376 Sum_probs=89.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
+..++.++|+..+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.+|++ ++++++++|+|.
T Consensus 2 v~~~~~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~v~ 71 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLES-EVPVMVDFWAPWCGPCKLIAPVIDELAKEYS-------GKIAVYKLNTD--EAPGIATQYNIR 71 (105)
T ss_dssp CEECCTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEETT--TCHHHHHHTTCC
T ss_pred ceechhhhHHHHHhcC-CCcEEEEEECCCChHHHHHHHHHHHHHHHhc-------CceEEEEEcCc--chHHHHHhCCCC
Confidence 5678999999987654 5889999999999999999999999999986 34899999984 678999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
++||+++|++|+. +..+.|..+.+.|.++|++.+
T Consensus 72 ~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 72 SIPTVLFFKNGER-------------KESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp SSSEEEEEETTEE-------------EEEEEECCCHHHHHHHHHHHC
T ss_pred cccEEEEEeCCeE-------------EEEEecCCCHHHHHHHHHhhC
Confidence 9999999887643 345778899999999998753
No 51
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.69 E-value=1.2e-16 Score=133.77 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=87.8
Q ss_pred ceecCc-ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 48 AVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 48 v~~L~~-~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
+..+++ ++|++.+.+.++++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--DECEDIAMEYNI 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--TTCHHHHHHTTC
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--cchHHHHHHcCC
Confidence 456777 899998885446899999999999999999999999999985 3499999998 468899999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.++||+++|++|+. +..+.| .+.+.|.++|++.+
T Consensus 73 ~~~Pt~~~~~~G~~-------------~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK-------------VEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp CSSSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHTC
T ss_pred CcccEEEEEcCCcE-------------EEEEcC-CCHHHHHHHHHHhC
Confidence 99999999987743 345677 78899999998753
No 52
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.69 E-value=7.4e-17 Score=137.12 Aligned_cols=106 Identities=13% Similarity=0.337 Sum_probs=85.4
Q ss_pred ceecCc-ccHHHHHhc-CCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 48 AVELNA-TNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 48 v~~L~~-~~f~~~l~~-~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
+..++. ++|++.+.. ..+++++|+|||+||++|+.+.|.++++++.+.. +.+.++.||+ +++.+++++|+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~------~~~~~~~vd~--~~~~~~~~~~~ 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN------SNVSFLSIDA--DENSEISELFE 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG------TTSEEEEEET--TTCHHHHHHTT
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC------CCEEEEEEec--ccCHHHHHHcC
Confidence 567777 999998876 4568999999999999999999999999998632 2489999998 46889999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+++||+++|++|+. +..+.|. ..++|.++|++.++
T Consensus 74 v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 74 ISAVPYFIIIHKGTI-------------LKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp CCSSSEEEEEETTEE-------------EEEECSC-CHHHHHHHHHHHHH
T ss_pred CCcccEEEEEECCEE-------------EEEecCC-CHHHHHHHHHHHHh
Confidence 999999999987743 3456676 45679999988764
No 53
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.69 E-value=1.4e-16 Score=133.36 Aligned_cols=99 Identities=19% Similarity=0.400 Sum_probs=85.9
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCe
Q 010178 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (516)
Q Consensus 52 ~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PT 131 (516)
+.++|++.+.+.++++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++++++++|+|.++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~vd~--~~~~~~~~~~~v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-------N-VIFLEVDV--DDCQDVASESEVKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------T-SEEEEEET--TTCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-------C-eEEEEEEh--hhhHHHHHHcCCCcCcE
Confidence 56889999986667899999999999999999999999999985 2 89999998 46899999999999999
Q ss_pred EEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+++|++|+ .+..+.|. +.+.|.++|++.+
T Consensus 77 ~~~~~~g~-------------~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 77 FQFFKKGQ-------------KVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEETTE-------------EEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEECCe-------------EEEEEeCC-CHHHHHHHHHHhC
Confidence 99998763 33557787 9999999998764
No 54
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.68 E-value=8.3e-17 Score=136.53 Aligned_cols=106 Identities=19% Similarity=0.359 Sum_probs=88.7
Q ss_pred cceec-CcccHHHHHhcCC--CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 47 HAVEL-NATNFDAVLRDTP--ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 47 ~v~~L-~~~~f~~~l~~~~--~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
.++.+ +.++|++.+.+.+ +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--~~~~~~~~~ 73 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--DAVAAVAEA 73 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTTHHHHHH
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--CchHHHHHH
Confidence 35666 5689999887633 5889999999999999999999999999985 3489999998 468899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+|.++||+++|++|+. +..+.|. +.++|.++|++.+.
T Consensus 74 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 74 AGITAMPTFHVYKDGVK-------------ADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HTCCBSSEEEEEETTEE-------------EEEEESC-CHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEECCeE-------------EEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999999987743 3456777 89999999988763
No 55
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.68 E-value=9.7e-17 Score=144.79 Aligned_cols=111 Identities=12% Similarity=0.176 Sum_probs=88.6
Q ss_pred cCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccC
Q 010178 51 LNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (516)
Q Consensus 51 L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~P 130 (516)
.+.++|++.+....++++||+|||+||++|+.+.|.++++++++. +.+.++.||+ +++++++++|+|.++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~-------~~~~~~~vd~--d~~~~l~~~~~v~~~P 79 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS-------KMAAIYLVDV--DQTAVYTQYFDISYIP 79 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT-------TTEEEEEEET--TTCCHHHHHTTCCSSS
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--CcCHHHHHHcCCCccC
Confidence 467889998874456899999999999999999999999999885 3489999998 5688999999999999
Q ss_pred eEEEecCCcccCCCCCCCccccchhhccc-cCCHHHHHHHHHHhc
Q 010178 131 MLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQT 174 (516)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~e~L~~~i~~~l 174 (516)
|+++|++|+...-... . ..-..+.| ..+.++|.++|++.+
T Consensus 80 t~~~~~~G~~v~~~~g---~-~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 80 STVFFFNGQHMKVDYG---S-PDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EEEEEETTEEEEEECS---S-SCCSCEESCCSSHHHHHHHHHHHH
T ss_pred eEEEEECCeEEEeecC---C-CCCCeEeeecCCHHHHHHHHHHHH
Confidence 9999988854310000 0 00145678 889999999998765
No 56
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.68 E-value=1e-16 Score=166.72 Aligned_cols=115 Identities=20% Similarity=0.502 Sum_probs=94.8
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
..|+.|++++|+..+.+. +++||+|||+||+||++++|.|+++++.+++..+ ..+.+.++.|||+ ++.++|++|+
T Consensus 5 ~~v~~l~~~~f~~~~~~~--~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~-~~~~v~~~~Vd~~--~~~~l~~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNA--DVALVNFYADWCRFSQMLHPIFEEASDVIKEEFP-NENQVVFARVDCD--QHSDIAQRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHHHC--SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CCEEEEEEETT--TCHHHHHHTT
T ss_pred CceEECCHHHHHHHHhcC--CeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC-CCCceEEEEEECC--ccHHHHHhcC
Confidence 458899999999988764 7899999999999999999999999999964210 0145999999995 5789999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchh-hccccCCHHHHHHHHHHhcccCC
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIR-ALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~-~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
|++|||+++|++|+. +. .|.|.++.+.|.+||.+.++..+
T Consensus 80 v~~~Pt~~~f~~G~~-------------~~~~~~G~~~~~~l~~~i~~~~~~~v 120 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMM-------------MKREYRGQRSVKALADYIRQQKSDPI 120 (382)
T ss_dssp CCEESEEEEEETTEE-------------EEEECCSCCSHHHHHHHHHHHHSCCC
T ss_pred CCcCCEEEEEeCCcE-------------eeeeecCcchHHHHHHHHHHhccCCc
Confidence 999999999987742 22 48899999999999999987654
No 57
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.68 E-value=1.7e-16 Score=170.74 Aligned_cols=115 Identities=26% Similarity=0.490 Sum_probs=99.1
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+.|+.|+.++|+..+.+ ++++||+|||+||+||+++.|.|+++++.+.+. .+.++.|||+ ++..+|+
T Consensus 11 ~~~~~v~~l~~~~f~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~------~v~~~~vd~~--~~~~l~~ 80 (504)
T 2b5e_A 11 PEDSAVVKLATDSFNEYIQS--HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK------NITLAQIDCT--ENQDLCM 80 (504)
T ss_dssp CTTSSCEECCTTTHHHHHTT--CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------TCEEEEEETT--TCHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhc--CCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC------CeEEEEEECC--CCHHHHH
Confidence 44667999999999998865 488999999999999999999999999999742 3899999995 5789999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
+|+|++|||+++|++|+.. .+..|.|.++.+.|.+||.+.+++.+
T Consensus 81 ~~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~~~~~~l~~~l~~~~~~~v 125 (504)
T 2b5e_A 81 EHNIPGFPSLKIFKNSDVN-----------NSIDYEGPRTAEAIVQFMIKQSQPAV 125 (504)
T ss_dssp HTTCCSSSEEEEEETTCTT-----------CEEECCSCCSHHHHHHHHHHHTSCSE
T ss_pred hcCCCcCCEEEEEeCCccc-----------cceeecCCCCHHHHHHHHHHhcCCcc
Confidence 9999999999999887421 13568899999999999999987654
No 58
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.68 E-value=2.1e-16 Score=134.30 Aligned_cols=102 Identities=22% Similarity=0.361 Sum_probs=86.0
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
.....+.++|++.+.+ +++++|+|||+||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++|+|
T Consensus 8 ~~~~~~~~~f~~~~~~--~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--~~~~~l~~~~~v 75 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQ--DKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--DELGDVAQKNEV 75 (109)
T ss_dssp CEECCSHHHHHHHTTS--SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHhc--CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--CCCHHHHHHcCC
Confidence 3446778999998876 4889999999999999999999999999984 388999998 468999999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+++||+++|.+|+ .+..+.|. +.+.|.++|++.+
T Consensus 76 ~~~Pt~~~~~~G~-------------~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 76 SAMPTLLLFKNGK-------------EVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp CSSSEEEEEETTE-------------EEEEEESS-CHHHHHHHHHHHC
T ss_pred CccCEEEEEECCE-------------EEEEEeCC-CHHHHHHHHHhhC
Confidence 9999999998764 33456676 7799999998753
No 59
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.68 E-value=1.7e-16 Score=137.03 Aligned_cols=108 Identities=17% Similarity=0.356 Sum_probs=91.2
Q ss_pred cCcceecCcccHHHHHhcC--CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 45 VDHAVELNATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~--~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+..++.++|+..+.+. .+++++|.||++||++|+.+.|.++++++.+. + +.|+.||++ ++.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~-~~~~~vd~~--~~~~~~~ 81 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-------N-AVFLKVDVD--ELKPIAE 81 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEETT--TCHHHHH
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-cEEEEEECC--CCHHHHH
Confidence 3456778999999988752 35889999999999999999999999999875 3 899999984 6889999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|+|.++||+++|++|+. +..+.|.. .++|.++|++.++.
T Consensus 82 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 82 QFSVEAMPTFLFMKEGDV-------------KDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp HTTCCSSSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHHHHSC
T ss_pred HcCCCcccEEEEEeCCEE-------------EEEEeCcC-HHHHHHHHHHHhcc
Confidence 999999999999987743 34577888 99999999988753
No 60
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.68 E-value=2.3e-16 Score=137.93 Aligned_cols=105 Identities=19% Similarity=0.361 Sum_probs=89.5
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
...+..++. ++|++.+.. ++++||+|||+||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++
T Consensus 18 ~~mv~~l~~~~~f~~~~~~--~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--d~~~~l~~~ 85 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIMSE--DILTVAWFTAVWCGPCKTIERPMEKIAYEFP--------TVKFAKVDA--DNNSEIVSK 85 (125)
T ss_dssp CSCCEEECCHHHHHHHHHS--SSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHH
T ss_pred ccceEECCCHHHHHHHHcc--CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--CCCHHHHHH
Confidence 344888998 999998844 4889999999999999999999999999973 389999998 468899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+|.++||+++|++|+. +..+.| .+.+.|.++|.+.++
T Consensus 86 ~~v~~~Pt~~i~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 86 CRVLQLPTFIIARSGKM-------------LGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCCeE-------------EEEEeC-CCHHHHHHHHHHHhc
Confidence 99999999999987743 345677 688999999988764
No 61
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.5e-17 Score=147.24 Aligned_cols=88 Identities=24% Similarity=0.412 Sum_probs=78.0
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
+..++.++.++|++.+.+.++++++|+|||+||++|+.+.|.|+++++++.+ ..+.|+.||++ ++++++++|
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~------~~v~~~~vd~~--~~~~~~~~~ 77 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC------TGLNFGKVDVG--RYTDVSTRY 77 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS------SSCEEEECCTT--TCHHHHHHT
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC------CCeEEEEEeCc--cCHHHHHHc
Confidence 4568899999999999887667899999999999999999999999999963 25899999984 688999999
Q ss_pred CCC------ccCeEEEecCCcc
Q 010178 125 SVG------HYPMLLWGSPSKF 140 (516)
Q Consensus 125 ~I~------~~PTl~~f~~g~~ 140 (516)
+|. ++||+++|++|+.
T Consensus 78 ~v~~~~~~~~~Pt~~~~~~G~~ 99 (137)
T 2dj0_A 78 KVSTSPLTKQLPTLILFQGGKE 99 (137)
T ss_dssp TCCCCSSSSCSSEEEEESSSSE
T ss_pred cCcccCCcCCCCEEEEEECCEE
Confidence 999 9999999987743
No 62
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=1.3e-16 Score=137.19 Aligned_cols=108 Identities=17% Similarity=0.346 Sum_probs=91.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
...+..++.++|...+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++..++++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~ 80 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSS-NKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDVD--TNPETARNF 80 (121)
T ss_dssp -CCSEECCTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEETT--TCHHHHHHT
T ss_pred cccceecCHHHHHHHHHhC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHhc
Confidence 4568899999999877654 5789999999999999999999999999985 34899999984 688999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|.++||+++|++|+ .+..+.|..+.+.|.++|++.++
T Consensus 81 ~i~~~Pt~~~~~~g~-------------~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 81 QVVSIPTLILFKDGQ-------------PVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHTCSCCC
T ss_pred CCCcCCEEEEEECCE-------------EEEEecCCCCHHHHHHHHHHHHh
Confidence 999999999998764 33557889999999999977654
No 63
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.68 E-value=2.8e-17 Score=138.50 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=72.4
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCe
Q 010178 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (516)
Q Consensus 52 ~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PT 131 (516)
+.++|++.+.+ +++++|+|||+||++|+.+.|.++++++.+. .+.++.||+ +++++++++|+|.++||
T Consensus 7 ~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--~~~~~l~~~~~v~~~Pt 74 (105)
T 4euy_A 7 TIEELATYIEE--QQLVLLFIKTENCGVCDVMLRKVNYVLENYN--------YVEKIEILL--QDMQEIAGRYAVFTGPT 74 (105)
T ss_dssp ---CCSSSTTC--SSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--------TEEEEEEEE--CCC---------CCCCE
T ss_pred CHHHHHHHHhc--CCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--------CceEEEEEC--CCCHHHHHhcCCCCCCE
Confidence 34566666633 5889999999999999999999999999873 389999998 46889999999999999
Q ss_pred EEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 75 ~~~~~~G~-------------~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 75 VLLFYNGK-------------EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEETTE-------------EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEeCCe-------------EEEEEeCCcCHHHHHHHHHHhh
Confidence 99998774 3456788999999999998764
No 64
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.68 E-value=1.5e-16 Score=136.51 Aligned_cols=103 Identities=17% Similarity=0.422 Sum_probs=87.6
Q ss_pred cceecCc-ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 47 HAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 47 ~v~~L~~-~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
.+..+++ ++|++.+.+.++++++|+|||+||++|+.+.|.++++++.+ .+.++.||+ +++.+++++|+
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---------~~~~~~vd~--~~~~~~~~~~~ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---------DAIFVKVDV--DKLEETARKYN 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---------SSEEEEEET--TTSHHHHHHTT
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---------CcEEEEEEC--CccHHHHHHcC
Confidence 3778887 99999998656789999999999999999999999998876 178999998 46889999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|.++||+++|++|+. +..+.| .+.+.|.++|++.+
T Consensus 83 v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK-------------VGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHC
T ss_pred CCccceEEEEeCCcE-------------EEEEeC-CCHHHHHHHHHHhC
Confidence 999999999987743 345667 68899999998753
No 65
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=6.1e-17 Score=141.99 Aligned_cols=115 Identities=19% Similarity=0.486 Sum_probs=94.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
....+..++.++|+..+.+ .++++||+|||+||++|+.+.|.|+++++.+.+. +.+.++.||++ ++..++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-----~~~~~~~vd~~--~~~~~~~~ 76 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMD-PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-----KDLVIAKMDAT--ANDITNDQ 76 (133)
T ss_dssp SSCSSEECCTTTCCCCCTC-TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-----SSEEEEEECTT--TSCCCCSS
T ss_pred CCCceEEEcCCCHHHHhcc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-----CCEEEEEecCC--cCHHHHhh
Confidence 4567899999999987765 3589999999999999999999999999999642 35999999984 56788999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhcc-ccCCHHHHHHHHHHhcccC
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~-G~~~~e~L~~~i~~~l~~~ 177 (516)
|+|.++||+++|.+|.... ...+. |.++.++|.+||.+.++..
T Consensus 77 ~~v~~~Pt~~~~~~g~~~~-----------~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 77 YKVEGFPTIYFAPSGDKKN-----------PIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CCCSSSSEEEEECTTCTTS-----------CEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred cCCCcCCEEEEEeCCCccc-----------ceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999999999998763211 12355 5589999999999998754
No 66
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.67 E-value=8.8e-17 Score=138.46 Aligned_cols=114 Identities=18% Similarity=0.427 Sum_probs=90.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
..+.+..+++++|+..+.. ++++++|+|||+||++|+.+.|.|+++++.+.+.+ ....+.++.|||+. +. +++
T Consensus 5 ~~~~v~~l~~~~f~~~v~~-~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~--~~~~v~~~~vd~~~--~~-~~~- 77 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLD-DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSE--FKDRVVIAKVDATA--ND-VPD- 77 (121)
T ss_dssp CSCSSEECCTTTTTTSSSC-TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSS--CTTSSEEEEEETTT--SC-CSS-
T ss_pred CCCCeEEecccCHHHHhhc-CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcc--cCCceEEEEEECcc--cc-ccc-
Confidence 3567899999999987644 35889999999999999999999999999997421 01258999999963 22 555
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|+++||+++|++|... .+..+.|.++.++|.+||+++++.
T Consensus 78 -~v~~~Pt~~~~~~~~~~-----------~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 78 -EIQGFPTIKLYPAGAKG-----------QPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp -CCSSSSEEEEECSSCTT-----------SCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred -ccCcCCeEEEEeCcCCC-----------CceEecCCCCHHHHHHHHHhccCc
Confidence 99999999999876210 134578999999999999998764
No 67
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.67 E-value=2.7e-16 Score=149.72 Aligned_cols=112 Identities=18% Similarity=0.388 Sum_probs=96.7
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
.....+..+++++|+..+.. ++++||+|||+||++|+.+.|.|+++++.+. +.+.|+.|||+ ++..+++
T Consensus 94 ~~~~~v~~l~~~~f~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~-------~~v~~~~vd~~--~~~~l~~ 162 (210)
T 3apq_A 94 DDDPEIITLERREFDAAVNS--GELWFVNFYSPGCSHCHDLAPTWREFAKEVD-------GLLRIGAVNCG--DDRMLCR 162 (210)
T ss_dssp TTCTTSEECCHHHHHHHHHH--SCCEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEETT--TCHHHHH
T ss_pred CCCCceEEecHHHHHHHHcc--CCcEEEEEeCCCChhHHHHHHHHHHHHHHhc-------CceEEEEEECC--ccHHHHH
Confidence 34556889999999998855 4789999999999999999999999999986 35999999984 6889999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
+|+|.++||+++|++|+. +..+.|.++.+.|.+||.+.++..+
T Consensus 163 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 163 MKGVNSYPSLFIFRSGMA-------------AVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp HTTCCSSSEEEEECTTSC-------------CEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred HcCCCcCCeEEEEECCCc-------------eeEecCCCCHHHHHHHHHHhCcccc
Confidence 999999999999987743 3567899999999999999987543
No 68
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.67 E-value=3.2e-16 Score=136.57 Aligned_cols=109 Identities=20% Similarity=0.417 Sum_probs=90.2
Q ss_pred ccccCcceec-CcccHHHHHhcC--CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccH
Q 010178 42 KVEVDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINT 118 (516)
Q Consensus 42 ~~~~~~v~~L-~~~~f~~~l~~~--~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~ 118 (516)
+.....+..+ +.++|++.+... ++++++|+||++||++|+.+.|.++++++++. .+.|+.||+ +++.
T Consensus 12 ~~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--d~~~ 81 (124)
T 1xfl_A 12 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--DELK 81 (124)
T ss_dssp CCCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--TTSH
T ss_pred hcCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--ccCH
Confidence 3445567777 679999988753 35899999999999999999999999999974 389999998 4688
Q ss_pred HHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 119 NLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 119 ~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+++++|+|.++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 82 ~l~~~~~v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 82 SVASDWAIQAMPTFMFLKEGKI-------------LDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHHHTTCCSSSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHHC
T ss_pred HHHHHcCCCccCEEEEEECCEE-------------EEEEeC-CCHHHHHHHHHHhc
Confidence 9999999999999999987743 344667 58899999998765
No 69
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.67 E-value=4.5e-16 Score=129.85 Aligned_cols=102 Identities=24% Similarity=0.471 Sum_probs=85.9
Q ss_pred eecCc-ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 49 VELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 49 ~~L~~-~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
..++. ++|++.+.+..+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++++++++|+|.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--~~~~~~~~~~~v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--------EVEFAKVDV--DQNEEAAAKYSVT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHTTCC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--------CCEEEEEec--cCCHHHHHHcCCc
Confidence 45555 889999986556899999999999999999999999999874 389999998 4678999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
++||+++|++|+. +..+.| .+.+.|.++|++.+
T Consensus 72 ~~Pt~~~~~~g~~-------------~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 72 AMPTFVFIKDGKE-------------VDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp SSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHC
T ss_pred cccEEEEEeCCcE-------------EEEEeC-CCHHHHHHHHHhhC
Confidence 9999999987643 345667 68999999998753
No 70
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.67 E-value=5.2e-17 Score=141.57 Aligned_cols=106 Identities=18% Similarity=0.393 Sum_probs=86.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh--------------hhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP--------------ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD 111 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~--------------~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VD 111 (516)
+.++.++.++|+..+.+. +++++|+|||+||+ +|+.+.|.++++++.+. +.+.++.||
T Consensus 3 ~~v~~l~~~~f~~~~~~~-~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~-------~~~~~~~vd 74 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ-------GKLTVAKLN 74 (123)
T ss_dssp CSCEECCSTTHHHHTTSC-SSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEE
T ss_pred CccEecChhhHHHHHHhC-CCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc-------CCeEEEEEE
Confidence 458899999999877543 58999999999999 99999999999999885 358999999
Q ss_pred ccccccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 112 CALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 112 c~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
++ ++++++++|+|+++||+++|++|+ .+..+.|.++.++|.++|++.+
T Consensus 75 ~d--~~~~l~~~~~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 75 ID--QNPGTAPKYGIRGIPTLLLFKNGE-------------VAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TT--SCTTTGGGGTCCBSSEEEEEESSS-------------EEEEEESCCCHHHHHHHHTTTC
T ss_pred CC--CCHHHHHHcCCCccCEEEEEECCE-------------EEEEEeCCCCHHHHHHHHHHHh
Confidence 84 678899999999999999997764 3345789999999999998765
No 71
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.66 E-value=2.6e-16 Score=162.79 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=95.1
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhh------HHHHHHHHHhCCCCCCCCCeEEEEEEeccccc
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYK------PQYEKVARLFNGPNAAHPGIILMTRVDCALKI 116 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~------P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~ 116 (516)
...+.|+.|+.++|++.+.+. +++||+|||||||||+... |.|+++++.+.+ ..+.+++|||+ +
T Consensus 10 ~~~~~v~~lt~~~f~~~i~~~--~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~------~~v~~~~Vd~~--~ 79 (367)
T 3us3_A 10 DGVDRVINVNAKNYKNVFKKY--EVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED------KGVGFGLVDSE--K 79 (367)
T ss_dssp CCCCCCEECCTTTHHHHHHHC--SEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT------TTEEEEEEETT--T
T ss_pred CCCCccEECCHHHHHHHHhhC--CeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc------CCceEEEEeCc--c
Confidence 345679999999999999764 8899999999999974433 799999999974 24999999995 6
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
++++|++|+|++|||+++|++|+. ..|.|.++++.|++||.+++++.+
T Consensus 80 ~~~l~~~~~V~~~PTl~~f~~G~~--------------~~y~G~~~~~~i~~~i~~~~~~~v 127 (367)
T 3us3_A 80 DAAVAKKLGLTEEDSIYVFKEDEV--------------IEYDGEFSADTLVEFLLDVLEDPV 127 (367)
T ss_dssp THHHHHHHTCCSTTEEEEEETTEE--------------EECCSCCSHHHHHHHHHHHHSCSE
T ss_pred cHHHHHHcCCCcCceEEEEECCcE--------------EEeCCCCCHHHHHHHHHHhcCCCc
Confidence 899999999999999999987632 368899999999999999987644
No 72
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=2.9e-16 Score=151.55 Aligned_cols=111 Identities=24% Similarity=0.546 Sum_probs=96.0
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
..+.++.+++++|+..+.+ +++++|+|||+||++|+.+.|.|+++++.+.+.+ ..+.++.|||+ ++.++|++
T Consensus 13 ~~~~v~~l~~~~~~~~~~~--~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~----~~~~~~~vd~~--~~~~l~~~ 84 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVAD--KDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKD----PPIPVAKIDAT--SASVLASR 84 (241)
T ss_dssp EETTEEEECTTTHHHHHTT--CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSS----SCCCEEEEETT--TCHHHHHH
T ss_pred cCCCcEEecccCHHHHHhc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcC----CceEEEEEecc--CCHHHHHh
Confidence 3567999999999998865 4889999999999999999999999999997543 34899999984 68899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
|+|+++||+++|++|+ .+ .+.|.++.+.|.+++.+.+..
T Consensus 85 ~~v~~~Pt~~~~~~g~-------------~~-~~~g~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 85 FDVSGYPTIKILKKGQ-------------AV-DYEGSRTQEEIVAKVREVSQP 123 (241)
T ss_dssp TTCCSSSEEEEEETTE-------------EE-ECCSCSCHHHHHHHHHHHHST
T ss_pred cCCCcCCEEEEEcCCC-------------cc-cccCcccHHHHHHHHhhccCc
Confidence 9999999999998763 22 478999999999999998764
No 73
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.66 E-value=3.1e-16 Score=150.73 Aligned_cols=112 Identities=18% Similarity=0.364 Sum_probs=96.5
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
.....+..++.++|++.+.+. +++++|+|||+||++|+.+.|.++++++.+. +.+.|+.||++ ++..+++
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~-~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~d--~~~~l~~ 78 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAP 78 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEETT--TCTTTGG
T ss_pred CCCCCceeCCHHHHHHHHHhc-CCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCcEEEEEECC--CCHHHHH
Confidence 445678899999999976553 5889999999999999999999999999986 34899999984 6788999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
+|+|.++||+++|++|+ .+..+.|..+.+.|.++|++.+...
T Consensus 79 ~~~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 79 KYGIRGIPTLLLFKNGE-------------VAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp GGTCCSBSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred HcCCCcCCEEEEEECCe-------------EEEEeccccChHHHHHHHHhhcccc
Confidence 99999999999998774 3356789999999999999998643
No 74
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.66 E-value=4.3e-16 Score=132.73 Aligned_cols=104 Identities=19% Similarity=0.413 Sum_probs=88.5
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
+.....++.++|++.+.. +++++|+||++||++|+.+.|.++++++.+. .+.++.||++ ++..++++|
T Consensus 8 ~~~~~~~~~~~f~~~~~~--~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~~--~~~~~~~~~ 75 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQ--NELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDVD--EVSEVTEKE 75 (112)
T ss_dssp -CCEEECSHHHHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEETT--TTHHHHHHT
T ss_pred eeEEEECCHHHHHHHHcc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEECC--CCHHHHHHc
Confidence 445678999999999975 4889999999999999999999999999874 3899999984 678999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|.++||+++|++|+. +..+.|. +.+.|.++|++.+
T Consensus 76 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 76 NITSMPTFKVYKNGSS-------------VDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESC-CHHHHHHHHHTTC
T ss_pred CCCcccEEEEEECCcE-------------EEEEeCC-CHHHHHHHHHHhh
Confidence 9999999999987643 3456787 9999999998754
No 75
>3td7_A FAD-linked sulfhydryl oxidase R596; four helix-bundle, orfan domain, oxidoreductase; HET: FAD; 2.21A {Acanthamoeba polyphaga mimivirus}
Probab=99.66 E-value=7.6e-17 Score=155.49 Aligned_cols=77 Identities=14% Similarity=0.353 Sum_probs=70.6
Q ss_pred cHHHHHHHHhccCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHHhcCC-----CCCCChhHHHHHHHHhhhhhhh
Q 010178 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVT-----SPFNKTRDFALWLWSTHNQVNE 386 (516)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~~~-----~~~~~~~~~~lWlw~~HN~VN~ 386 (516)
++|++||+||++||+.|+......+++|+.+ |+||.+||+||.+++.+.+ +.++||++++.|||.+||.||+
T Consensus 46 stW~fLHTIAa~YPenPT~~dKk~y~~FI~nL~~vLPC~~Cr~HF~k~Lkk~Pv~~~~p~L~SRdsLskWL~~iHN~VNk 125 (295)
T 3td7_A 46 AGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNN 125 (295)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHTTSGGGCCCTTGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999995 6999999999999998754 3477999999999999999999
Q ss_pred hcccc
Q 010178 387 RLMKL 391 (516)
Q Consensus 387 rl~~~ 391 (516)
||+|+
T Consensus 126 rLGKP 130 (295)
T 3td7_A 126 KLEVD 130 (295)
T ss_dssp HHTCC
T ss_pred HhCCC
Confidence 99996
No 76
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.66 E-value=2.2e-16 Score=139.36 Aligned_cols=109 Identities=17% Similarity=0.322 Sum_probs=89.2
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
...++.++. ++|+..+.+.+++++||+|||+||++|+.+.|.++++++.+ .+.++.||+ +++.+++++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---------~v~~~~vd~--~~~~~l~~~ 87 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---------YVTLVDIDV--DIHPKLNDQ 87 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---------ECEEEEEET--TTCHHHHHH
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---------CEEEEEEec--cchHHHHHh
Confidence 345777775 88999998877789999999999999999999999988766 288999998 468899999
Q ss_pred CCCCccCeEEEec--CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 124 FSVGHYPMLLWGS--PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 124 ~~I~~~PTl~~f~--~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
|+|+++||+++|. +|+ +..+..+.|. +.++|.++|++.+..
T Consensus 88 ~~v~~~Pt~~~~~~~~g~-----------g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 88 HNIKALPTFEFYFNLNNE-----------WVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp TTCCSSSEEEEEEEETTE-----------EEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred cCCCCCCEEEEEEecCCC-----------eEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9999999999985 553 1234556776 899999999988753
No 77
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.65 E-value=1.6e-16 Score=138.92 Aligned_cols=87 Identities=26% Similarity=0.515 Sum_probs=77.0
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCC
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAG 143 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~ 143 (516)
++++++|+|||+||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|+++||+++|++|+
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~vd~--d~~~~l~~~~~v~~~Pt~~~~~~G~---- 107 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-------KRIYLLKVDL--DKNESLARKFSVKSLPTIILLKNKT---- 107 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-------GGEEEEEEEG--GGCHHHHHHTTCCSSSEEEEEETTE----
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--CCCHHHHHHcCCCCcCEEEEEECCE----
Confidence 35899999999999999999999999999986 4699999998 4688999999999999999997763
Q ss_pred CCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 144 SWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 144 ~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
.+..+.|.++.++|.++|++
T Consensus 108 ---------~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 108 ---------MLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp ---------EEEEESSCCCHHHHHHHHTT
T ss_pred ---------EEEEecCCCCHHHHHHHHHh
Confidence 34567899999999999865
No 78
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.65 E-value=5.7e-16 Score=139.95 Aligned_cols=108 Identities=20% Similarity=0.401 Sum_probs=90.7
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
..+..++ .++|+..+.+.+++++||+||++||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--~~~~~l~~~~ 81 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--------QVSFVKLEA--EGVPEVSEKY 81 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHHHT
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--------CeEEEEEEC--CCCHHHHHHc
Confidence 4466776 5899999987656899999999999999999999999999873 389999998 4688999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
+|.++||+++|.+|+. +..+.| .+.++|.++|.+.++..
T Consensus 82 ~v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 82 EISSVPTFLFFKNSQK-------------IDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHSCTT
T ss_pred CCCCCCEEEEEECCEE-------------EEEEeC-CCHHHHHHHHHHHhccc
Confidence 9999999999987643 344566 57889999999988653
No 79
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.65 E-value=1.9e-16 Score=139.98 Aligned_cols=106 Identities=12% Similarity=0.156 Sum_probs=90.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------ccc
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------KIN 117 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------d~~ 117 (516)
...+..++.++|++.+.+ +++|+|||+||++|+.+.|.++++++.+. +.|+.||++. +++
T Consensus 15 ~~~v~~l~~~~~~~~~~~----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---------v~~~~vd~~~~~~~~~~d~~ 81 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG----DAILAVYSKTCPHCHRDWPQLIQASKEVD---------VPIVMFIWGSLIGERELSAA 81 (135)
T ss_dssp TTEEEECCHHHHHHHHTS----SEEEEEEETTCHHHHHHHHHHHHHHTTCC---------SCEEEEEECTTCCHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC----cEEEEEECCcCHhhhHhChhHHHHHHHCC---------CEEEEEECCCchhhhhhhhh
Confidence 456888999999998865 79999999999999999999999998763 7788999832 467
Q ss_pred HHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 118 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 118 ~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
.+++++|+|.++||+++|++|+ .+..+.|..+.+.+.+++++.++.
T Consensus 82 ~~l~~~~~v~~~Pt~~~~~~G~-------------~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 82 RLEMNKAGVEGTPTLVFYKEGR-------------IVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHHHTCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHHHcCCceeCeEEEEcCCE-------------EEEEEeCCCCHHHHHHHHHHHhCC
Confidence 8999999999999999998874 345678999999999999988764
No 80
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.64 E-value=3.1e-16 Score=161.01 Aligned_cols=110 Identities=18% Similarity=0.170 Sum_probs=95.1
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHH-------HHHHHHHhCCCCCCCCCeEEEEEEeccccc
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQ-------YEKVARLFNGPNAAHPGIILMTRVDCALKI 116 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~-------~~~la~~~~~~~~~~~~~v~~~~VDc~~d~ 116 (516)
..+.|+.|+.++|++.+.+ ++++||+||||||| |+.++|. |+++++.+++. .+.++.|||+ +
T Consensus 9 ~~~~v~~l~~~~f~~~i~~--~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~------~v~~~~Vd~~--~ 77 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKK--YDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK------DIGFVMVDAK--K 77 (350)
T ss_dssp CCCCCEEECHHHHHHHHTT--CSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS------SEEEEEEETT--T
T ss_pred CCCccEECCHHHHHHHHhh--CCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc------CcEEEEEeCC--C
Confidence 3456899999999998875 47899999999999 9999999 99999998642 4999999995 5
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
+.++|++|+|++|||+++|++|+ +..|.|.++.+.|.+|+.+.+++.+
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~~g~--------------~~~~~G~~~~~~l~~~i~~~~~~~~ 125 (350)
T 1sji_A 78 EAKLAKKLGFDEEGSLYVLKGDR--------------TIEFDGEFAADVLVEFLLDLIEDPV 125 (350)
T ss_dssp THHHHHHHTCCSTTEEEEEETTE--------------EEEECSCCCHHHHHHHHHTTSSCSE
T ss_pred CHHHHHhcCCCccceEEEEECCc--------------EEEecCCCCHHHHHHHHHHhcCCcc
Confidence 78999999999999999998773 2468899999999999999887543
No 81
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.64 E-value=1.1e-15 Score=147.55 Aligned_cols=112 Identities=27% Similarity=0.519 Sum_probs=96.3
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
.+..+..++.++|+..+.+. ++++|+|||+||++|+.+.|.|+++++.+.+.. ..+.++.||++ ++.+++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~----~~v~~~~vd~~--~~~~l~~~ 199 (241)
T 3idv_A 128 PPEVTLVLTKENFDEVVNDA--DIILVEFYAPWCGHCKKLAPEYEKAAKELSKRS----PPIPLAKVDAT--AETDLAKR 199 (241)
T ss_dssp CCCSSEECCTTTHHHHHHHC--SEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSS----SCCCEEEEETT--TCHHHHHH
T ss_pred ccccceeccHHHHHHhhccC--CeEEEEEECCCCHHHHHhHHHHHHHHHHHhccC----CcEEEEEEECC--CCHHHHHH
Confidence 34567889999999998764 789999999999999999999999999997533 35899999984 68899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
|+|+++||+++|++|+. +. |.|.++.++|.+||.+++++.
T Consensus 200 ~~v~~~Pt~~~~~~g~~-------------~~-~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 200 FDVSGYPTLKIFRKGRP-------------YD-YNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp TTCCSSSEEEEEETTEE-------------EE-CCSCCSHHHHHHHHHHHTTCT
T ss_pred cCCcccCEEEEEECCeE-------------EE-ecCCCCHHHHHHHHHhhhCCC
Confidence 99999999999987632 23 789999999999999998754
No 82
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.64 E-value=4.3e-16 Score=166.51 Aligned_cols=110 Identities=36% Similarity=0.673 Sum_probs=96.3
Q ss_pred cceecCcccHHHHHhcC-CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 47 HAVELNATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~-~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
.|+.|+.++|++.+.+. .+++++|+|||+||+||+++.|.|+++++.+. +.+.++.|||+ ++.++|++|+
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~-------~~v~~~~vd~~--~~~~l~~~~~ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLK-------GIVPLAKVDCT--ANTNTCNKYG 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCCEEEEETT--TCHHHHHHTT
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhc-------CceEEEEEECC--CCHHHHHhcC
Confidence 47899999999999653 23789999999999999999999999999996 34899999995 5899999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
|+++||+++|++|+ .+..|.|.++.+.|.+|+.+.+++.+
T Consensus 73 v~~~Ptl~~~~~g~-------------~~~~~~G~~~~~~l~~~~~~~~~~~~ 112 (481)
T 3f8u_A 73 VSGYPTLKIFRDGE-------------EAGAYDGPRTADGIVSHLKKQAGPAS 112 (481)
T ss_dssp CCEESEEEEEETTE-------------EEEECCSCSSHHHHHHHHHHHTSCSE
T ss_pred CCCCCEEEEEeCCc-------------eeeeecCccCHHHHHHHHHhhcccCc
Confidence 99999999998773 34568999999999999999987654
No 83
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.64 E-value=6.5e-16 Score=137.07 Aligned_cols=106 Identities=22% Similarity=0.371 Sum_probs=78.3
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
..+..++.++|+..+.+.+ + ++|+||++||++|+.+.|.++++++.+. +.+.|+.||+ +++.+++++|+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~-~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--~~~~~l~~~~~ 101 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAP-L-TLVDFFAPWCGPCRLVSPILEELARDHA-------GRLKVVKVNV--DEHPGLAARYG 101 (140)
T ss_dssp ----------------CCC-E-EEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--TTCHHHHHHTT
T ss_pred CccccCCHHHHHHHHHcCC-C-EEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--CCCHHHHHHCC
Confidence 5678899999999887653 4 8999999999999999999999999986 3599999998 46889999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|.++||+++|++|+. +..+.|..+.++|.+||++.++
T Consensus 102 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 102 VRSVPTLVLFRRGAP-------------VATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred CCccCEEEEEeCCcE-------------EEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999987743 3457889999999999998774
No 84
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.64 E-value=6.3e-16 Score=138.29 Aligned_cols=111 Identities=11% Similarity=0.128 Sum_probs=85.0
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCe
Q 010178 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (516)
Q Consensus 52 ~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PT 131 (516)
+.++|+..+.+..+++++|+|||+||++|+.+.|.++++++++. +.+.|+.||++ ++.+++++|+|+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~d--~~~~~~~~~~i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK-------NFAVIYLVDIT--EVPDFNKMYELYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEETT--TCCTTTTSSCSCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCeEEEEEccc--cCHHHHHHcCCCCCCE
Confidence 57889887765346899999999999999999999999999985 35999999984 6788999999999999
Q ss_pred EEEecCCcccCCCCCCCccccchhhccccCC-HHHHHHHHHHhcc
Q 010178 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 175 (516)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~-~e~L~~~i~~~l~ 175 (516)
+++|.+|+....... . .....+.|..+ .++|.++|++.+.
T Consensus 81 ~~~~~~G~~v~~~~g---~-~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 81 VMFFFRNKHIMIDLG---T-GNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp EEEEETTEEEEEECC----------CCSCCSCHHHHHHHHHHHHH
T ss_pred EEEEECCcEEEEecC---C-CCcceeeeecCcHHHHHHHHHHHHH
Confidence 999988864321000 0 00113456654 8899999987664
No 85
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.64 E-value=4.5e-16 Score=133.83 Aligned_cols=104 Identities=10% Similarity=0.103 Sum_probs=82.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--cccHHHHHh
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDK 123 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--d~~~~l~~~ 123 (516)
..+..++.++|+..+.+. ++++|+|||+|||+|+.+.|.++++++.+. ..+.++.++... +++.+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~ 82 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKK--ETATFFIGRKTCPYCRKFAGTLSGVVAETK-------AHIYFINSEEPSQLNDLQAFRSR 82 (118)
T ss_dssp TTSEECCHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHHHHHHC-------CCCEEEETTCGGGHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHhCC--CeEEEEEECCCCccHHHHHHHHHHHHHhcC-------CeEEEEECCCcCcHHHHHHHHHH
Confidence 346788999999988753 789999999999999999999999999885 234554333211 234689999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHH
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~ 171 (516)
|+|.++||+++|++|+. +..+.|.++.++|.+||+
T Consensus 83 ~~i~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 83 YGIPTVPGFVHITDGQI-------------NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HTCCSSCEEEEEETTEE-------------EEECCTTCCHHHHHHHHT
T ss_pred cCCCCCCeEEEEECCEE-------------EEEecCCCCHHHHHHHhh
Confidence 99999999999987743 355788999999999885
No 86
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.63 E-value=5.8e-16 Score=131.78 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=84.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
+..++.++| +.+.+ +++++|+|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|+
T Consensus 5 ~~~~~~~~f-~~~~~--~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~--~~~~~l~~~~~v~ 71 (110)
T 2l6c_A 5 RDITTEAGM-AHFEG--LSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--------QVAISSVDS--EARPELMKELGFE 71 (110)
T ss_dssp SBCGGGCSH-HHHTT--CSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--------TSCEEEEEG--GGCHHHHHHTTCC
T ss_pred eecCCHHHH-HHHHc--CCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--------CcEEEEEcC--cCCHHHHHHcCCc
Confidence 456788999 66654 3789999999999999999999999998763 378999998 4688999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
++||+++|++|+. +..+.|..+.++|.+++.+..++
T Consensus 72 ~~Pt~~~~~~G~~-------------v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 72 RVPTLVFIRDGKV-------------AKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSCEEEEEESSSE-------------EEEEESCCCHHHHHHHHHTC---
T ss_pred ccCEEEEEECCEE-------------EEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999999987743 35678889999999999877653
No 87
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.63 E-value=5.8e-16 Score=134.61 Aligned_cols=93 Identities=13% Similarity=0.210 Sum_probs=79.3
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEec-CCcccC
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGS-PSKFVA 142 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~-~g~~~~ 142 (516)
.+++++|+||++||++|+.+.|.++++++.+. +.+.++.||++.+++.+++++|+|.++||+++|. +|+
T Consensus 25 ~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~--- 94 (126)
T 2l57_A 25 EGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGN--- 94 (126)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCC---
T ss_pred CCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCC---
Confidence 45889999999999999999999999999985 3489999993225688999999999999999997 553
Q ss_pred CCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 143 GSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 143 ~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
.+..+.|..+.++|.++|++.++.
T Consensus 95 ----------~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 95 ----------KFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp ----------EEEEEESCCCHHHHHHHHHHHCCC
T ss_pred ----------EEEEecCCCCHHHHHHHHHHHhcc
Confidence 334577899999999999998764
No 88
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=132.27 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=81.6
Q ss_pred cceecCcccHHHHHhcCC-CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 47 HAVELNATNFDAVLRDTP-ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~-~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
.+.+++.++|.+.+.+.. +++++|+|||+||++|+.+.|.++++|+++. .+.|++||++ +. +.+|+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--------~v~f~kvd~d--~~---~~~~~ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--------ETKFVKAIVN--SC---IQHYH 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--------TSEEEEEEGG--GT---STTCC
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--------CCEEEEEEhH--Hh---HHHCC
Confidence 467889999999887653 4589999999999999999999999999984 3899999974 32 58999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhcc-ccCCHHHHHHHHHH
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINK 172 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~-G~~~~e~L~~~i~~ 172 (516)
|+++||+++|++|+....- ....... ...+.++|..+|.+
T Consensus 71 v~~~PT~~~fk~G~~v~~~-------~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 71 DNCLPTIFVYKNGQIEAKF-------IGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp GGGCSEEEEEETTEEEEEE-------ESTTTTTCSSCCHHHHHHHHHT
T ss_pred CCCCCEEEEEECCEEEEEE-------eChhhhCCCCCCHHHHHHHHHH
Confidence 9999999999998654310 0001111 13578888888865
No 89
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.62 E-value=1.4e-15 Score=130.56 Aligned_cols=103 Identities=17% Similarity=0.445 Sum_probs=83.4
Q ss_pred ccCcceecCc-ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 44 EVDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 44 ~~~~v~~L~~-~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
....+..+++ ++|++.+.+ +++++|+|||+||++|+.+.|.++++++++. + +.++.||+ +++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~--~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~-------~-v~~~~vd~--~~~~~l~~ 77 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIKQ--NDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-------D-VRFVKCDV--DESPDIAK 77 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHHH--CSEEEEEEECTTCHHHHHTHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHH
T ss_pred chhheeecCCHHHHHHHHhC--CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-CEEEEEEC--CCCHHHHH
Confidence 3444555554 666777765 4889999999999999999999999999985 3 89999998 46789999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
+|+|.++||+++|++|+. +..+.|.. .+.|.++|++
T Consensus 78 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 78 ECEVTAMPTFVLGKDGQL-------------IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HTTCCSBSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHT
T ss_pred HCCCCcccEEEEEeCCeE-------------EEEEeCCC-HHHHHHHHHh
Confidence 999999999999887743 34567877 8899998864
No 90
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.61 E-value=1.8e-15 Score=133.79 Aligned_cols=108 Identities=13% Similarity=0.267 Sum_probs=88.6
Q ss_pred cCcceec-CcccHHHHHhcC--CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHH
Q 010178 45 VDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (516)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~--~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (516)
...++.+ +.++|++.+... .+++++|+|||+||++|+.+.|.++++++.+. .+.|+.||+ +++.+++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~v~~--~~~~~~~ 92 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--------SLMFLVIDV--DELSDFS 92 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHH
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEeC--cccHHHH
Confidence 4445666 479999887532 35889999999999999999999999999874 389999998 4689999
Q ss_pred HhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 122 ~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
++|+|.++||+++|++|+. +..+.|. +.++|.++|.+.++.
T Consensus 93 ~~~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 93 ASWEIKATPTFFFLRDGQQ-------------VDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp HHTTCCEESEEEEEETTEE-------------EEEEESC-CHHHHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEcCCeE-------------EEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999999999999877743 3456676 889999999988753
No 91
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.61 E-value=2.4e-15 Score=128.47 Aligned_cols=107 Identities=18% Similarity=0.391 Sum_probs=87.8
Q ss_pred Ccceec-CcccHHHHHhcC--CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 46 DHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~--~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
..++.+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.++++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--~~~~~~~~ 75 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--DELKDVAE 75 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHH
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--ccCHHHHH
Confidence 345666 578999888652 25789999999999999999999999999874 388999998 46889999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|+|.++||+++|++|+. +..+.| .+.++|.++|.+.++.
T Consensus 76 ~~~v~~~Pt~~~~~~g~~-------------~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 76 AYNVEAMPTFLFIKDGEK-------------VDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp HTTCCSBSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHHHC-
T ss_pred HcCCCcCcEEEEEeCCeE-------------EEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999999987643 344566 5889999999988753
No 92
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.60 E-value=2.8e-15 Score=132.17 Aligned_cols=107 Identities=11% Similarity=0.303 Sum_probs=86.7
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccc--cccHHHHHhC
Q 010178 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDKF 124 (516)
Q Consensus 50 ~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~--d~~~~l~~~~ 124 (516)
..+.++++..+.+.+++++||+|||+||++|+.+.|.+ .++++.+. .+.++.||++. +.+.+++++|
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--------~~~~~~vd~~~~~~~~~~l~~~~ 87 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--------DTVLLQANVTANDAQDVALLKHL 87 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--------TSEEEEEECTTCCHHHHHHHHHT
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--------CcEEEEEeCCCCcchHHHHHHHc
Confidence 44567888888765578999999999999999999999 99999885 28899999854 4578899999
Q ss_pred CCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|.++||+++| ++|+... ...+.|..+.++|.++|++.-+
T Consensus 88 ~v~~~Pt~~~~d~~G~~v~-----------~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 88 NVLGLPTILFFDGQGQEHP-----------QARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp TCCSSSEEEEECTTSCBCG-----------GGCBCSCCCHHHHHHHHHHC--
T ss_pred CCCCCCEEEEECCCCCEee-----------eeeeeeccCHHHHHHHHHhcCc
Confidence 99999999999 6664320 1457899999999999987644
No 93
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.60 E-value=9.3e-16 Score=137.36 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=77.3
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCC--ChhhhhhhHHHHHHHHHhCCCCCCCCCeEE--EEEEeccccccHHHHH
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGIIL--MTRVDCALKINTNLCD 122 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~W--C~~C~~~~P~~~~la~~~~~~~~~~~~~v~--~~~VDc~~d~~~~l~~ 122 (516)
.+..++.++|++.+.+. +.++|.||++| |++|+.++|.|+++++++ + .+. |+.||+ ++++++++
T Consensus 18 ~~~~l~~~~f~~~i~~~--~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-------~v~~~~~~Vd~--d~~~~la~ 85 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRV--GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-------QFDWQVAVADL--EQSEAIGD 85 (142)
T ss_dssp TCEECCCC--------C--CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-------TSCCEEEEECH--HHHHHHHH
T ss_pred cCcccccccHHHHHHhC--CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-------ccceeEEEEEC--CCCHHHHH
Confidence 57789999999998764 45789999988 999999999999999987 3 266 999998 56889999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
+|+|+++||+++|++|+. +..+.|.++.++|.++|++.++...
T Consensus 86 ~~~V~~iPT~~~fk~G~~-------------v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 86 RFNVRRFPATLVFTDGKL-------------RGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp TTTCCSSSEEEEESCC-----------------CEESCCCHHHHHHHHHHHHC---
T ss_pred hcCCCcCCeEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHhcccc
Confidence 999999999999988743 3567899999999999999886543
No 94
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=4.1e-15 Score=131.60 Aligned_cols=104 Identities=9% Similarity=0.137 Sum_probs=84.4
Q ss_pred cCcceecCcccHHHHHhcC-CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 45 VDHAVELNATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~-~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
...+..++.++|.+.+.+. +++++||+|||+||++|+.+.|.|+++++++. .+.|+.||++. +. ++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--------~v~~~~vd~~~--~~---~~ 75 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--------ETKFVKAIVNS--CI---EH 75 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--------SEEEEEECCSS--SC---SS
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CcEEEEEEhhc--Cc---cc
Confidence 3457888999999988764 34799999999999999999999999999873 38999999853 32 79
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhcccc-------CCHHHHHHHHHHhc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-------QTADGLLTWINKQT 174 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~-------~~~e~L~~~i~~~l 174 (516)
|+|.++||+++|.+|+.. ..+.|. .+.++|.++|.++-
T Consensus 76 ~~i~~~Pt~~~~~~G~~v-------------~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 76 YHDNCLPTIFVYKNGQIE-------------GKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp CCSSCCSEEEEESSSSCS-------------EEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCEEE-------------EEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 999999999999887543 223343 37899999998864
No 95
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.6e-15 Score=132.29 Aligned_cols=109 Identities=22% Similarity=0.379 Sum_probs=88.3
Q ss_pred ceecCcccHHHHHhc--CCCCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 48 AVELNATNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 48 v~~L~~~~f~~~l~~--~~~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
.+.++..+|++.+.. ..++++||+||++||++|+.+.|.+ +++++.+. ..+.++.||++.+.+..+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~~~ 80 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN-------RHFVNLKMDMEKGEGVELRK 80 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH-------HHSEEEEECSSSTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh-------cCeEEEEEecCCcchHHHHH
Confidence 445678888887742 1358899999999999999999999 77777664 35788999997556889999
Q ss_pred hCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 123 ~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|+|.++||+++| ++|+ .+..+.|..+.++|.++|++.++.
T Consensus 81 ~~~v~~~Pt~~~~d~~G~-------------~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 81 KYGVHAYPTLLFINSSGE-------------VVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HTTCCSSCEEEEECTTSC-------------EEEEEESCCCHHHHHHHHHHHHSC
T ss_pred HcCCCCCCEEEEECCCCc-------------EEEEecCCCCHHHHHHHHHHHHHh
Confidence 9999999999998 4553 334577889999999999998764
No 96
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.60 E-value=2.9e-15 Score=126.99 Aligned_cols=105 Identities=20% Similarity=0.471 Sum_probs=87.0
Q ss_pred cceec-CcccHHHHHhc--CCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 47 HAVEL-NATNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 47 ~v~~L-~~~~f~~~l~~--~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
.++.+ +.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--~~~~~~~~~ 74 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--------NVTFLKVDV--DELKAVAEE 74 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--TTCHHHHHH
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--------CcEEEEEEc--cccHHHHHh
Confidence 35566 67899998875 236899999999999999999999999999874 389999998 468899999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+|.++||+++|++|+. +..+.| .+.+.|.++|++.+.
T Consensus 75 ~~v~~~Pt~~~~~~G~~-------------~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 75 WNVEAMPTFIFLKDGKL-------------VDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HHCSSTTEEEEEETTEE-------------EEEEEC-CCTTHHHHHHHHHHH
T ss_pred CCCCcccEEEEEeCCEE-------------EEEEec-CCHHHHHHHHHHhhc
Confidence 99999999999987643 344566 688899999988753
No 97
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.60 E-value=5.3e-15 Score=144.39 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=91.5
Q ss_pred ccccCcceecCcccHHHHHhcCCCCeEEEEEe--cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---cc
Q 010178 42 KVEVDHAVELNATNFDAVLRDTPATYAVVEFF--ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KI 116 (516)
Q Consensus 42 ~~~~~~v~~L~~~~f~~~l~~~~~k~vlV~Fy--A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~---d~ 116 (516)
+.....++.|++++|++++.. ++++||+|| ||||| +.|.|+++|+.+.++. +.|.|+.|||+. ++
T Consensus 12 ~~~~~~v~~Lt~~nF~~vi~~--~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~----~~v~~akVD~d~~g~~~ 81 (248)
T 2c0g_A 12 SVTCTGCVDLDELSFEKTVER--FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKAT----KDLLIATVGVKDYGELE 81 (248)
T ss_dssp ---CTTCEECCTTTHHHHHTT--SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHC----SSEEEEEEEECSSTTCT
T ss_pred CCCCCCcEECCHHHHHHHHhc--CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccC----CCeEEEEEECCcccccc
Confidence 455667899999999997744 478999999 99999 9999999999985311 359999999964 12
Q ss_pred cHHHHHhCCCC--ccCeEEEecCCcccCCCCCCCccccchhhc--cccCCHHHHHHHHHHhccc
Q 010178 117 NTNLCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRAL--EDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 117 ~~~l~~~~~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~--~G~~~~e~L~~~i~~~l~~ 176 (516)
++++|++|+|+ +|||+++|+ |+.. .+..| .|.++.+.|.+||+++++.
T Consensus 82 n~~la~~~~V~~~~~PTl~~F~-G~~~-----------~~~~y~~~G~~~~~~L~~fi~~~~~~ 133 (248)
T 2c0g_A 82 NKALGDRYKVDDKNFPSIFLFK-GNAD-----------EYVQLPSHVDVTLDNLKAFVSANTPL 133 (248)
T ss_dssp THHHHHHTTCCTTSCCEEEEES-SSSS-----------SEEECCTTSCCCHHHHHHHHHHHSSC
T ss_pred cHHHHHHhCCCcCCCCeEEEEe-CCcC-----------cceeecccCCCCHHHHHHHHHHhhcc
Confidence 89999999999 999999998 7421 12446 7999999999999999873
No 98
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.59 E-value=3.9e-15 Score=153.05 Aligned_cols=111 Identities=21% Similarity=0.448 Sum_probs=92.3
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
....+..+++++|+..+.+. +++++|+|||+||+||+++.|.|+++++.+++. ..+.++.|||+.+ . +.+
T Consensus 247 ~~~~v~~l~~~~f~~~~~~~-~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-----~~v~~~~vd~~~~--~--~~~ 316 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAFDE-KKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-----ENIVIAKMDSTAN--E--VEA 316 (361)
T ss_dssp TTSSSEEECTTTHHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-----SSEEEEEEETTTC--B--CSS
T ss_pred ccCCcEEeecCchhhhcccC-CCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-----CcEEEEEEECCcc--c--hhh
Confidence 34568899999999988653 588999999999999999999999999999753 3599999999643 2 789
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+|.+|||+++|++|. +..+..|.|.++.++|.+||+++..
T Consensus 317 ~~v~~~Pt~~~~~~~~-----------~~~~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 317 VKVHSFPTLKFFPASA-----------DRTVIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp CCCCSSSEEEEECSSS-----------SCCCEECCSCSSHHHHHHHHTTTSC
T ss_pred cCCcccCeEEEEECCC-----------CcceeEecCCCCHHHHHHHHHhcCC
Confidence 9999999999997652 1234678899999999999987653
No 99
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.59 E-value=2.2e-15 Score=130.40 Aligned_cols=104 Identities=17% Similarity=0.376 Sum_probs=85.4
Q ss_pred cceecC-cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 47 HAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 47 ~v~~L~-~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
.+..++ .++|++.+.. +++++|.||++||++|+.+.|.++++++.+.+ ..+.++.||+ +++.+++++|+
T Consensus 16 ~~~~i~~~~~f~~~l~~--~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--d~~~~~~~~~~ 85 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGG--DKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--DEQSQIAQEVG 85 (121)
T ss_dssp CEEECCSHHHHHHHHSS--SSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--TTCHHHHHHHT
T ss_pred ceEEcCCHHHHHHHHcC--CCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--cCCHHHHHHcC
Confidence 344554 4899998843 58899999999999999999999999988752 1289999998 46889999999
Q ss_pred CCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|.++||+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 86 v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 86 IRAMPTFVFFKNGQK-------------IDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESS-CHHHHHHHHHHHT
T ss_pred CCcccEEEEEECCeE-------------EeeEcCC-CHHHHHHHHHHhh
Confidence 999999999987743 3456777 8999999998765
No 100
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.58 E-value=4.7e-15 Score=127.88 Aligned_cols=109 Identities=19% Similarity=0.349 Sum_probs=83.9
Q ss_pred cceec--CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 47 HAVEL--NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 47 ~v~~L--~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+..+ +.++|++.+.+. ++++||+|||+||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++|
T Consensus 4 ~v~~~~g~~~~~~~~~~~~-~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--~~~~~~~~~~ 72 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEA-PGLVLVDFFATWCGPCQRLGQILPSIAEANK--------DVTFIKVDV--DKNGNAADAY 72 (118)
T ss_dssp CSEEECSCHHHHHHHHHHC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHT
T ss_pred cceEecCCHHHHHHHHHhC-CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CeEEEEEEC--CCCHHHHHhc
Confidence 45666 578888666543 4789999999999999999999999999872 389999998 4688999999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|.++||+++|.++. .++..+..+.|.. .++|.+.+.++..+
T Consensus 73 ~i~~~Pt~~~~~~~~---------~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 73 GVSSIPALFFVKKEG---------NEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp TCCSSSEEEEEEEET---------TEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred CCCCCCEEEEEeCCC---------CcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 999999999987510 0124445667755 45699999887653
No 101
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.56 E-value=1.2e-14 Score=155.20 Aligned_cols=117 Identities=17% Similarity=0.475 Sum_probs=98.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
...+..+++++|+..+.+. ++++||+|||+||+||+.+.|.|+++++.+.+. ..+.++.||++ .+ +++.+|
T Consensus 351 ~~~v~~~~~~~~~~~~~~~-~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-----~~v~~~~id~~--~~-~~~~~~ 421 (481)
T 3f8u_A 351 DGPVKVVVAENFDEIVNNE-NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-----PNIVIAKMDAT--AN-DVPSPY 421 (481)
T ss_dssp CSSSEEECTTTHHHHHTCT-TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-----SSEEEEEEETT--SS-CCCTTC
T ss_pred CCCeEEecccCHHHHhhcC-CCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-----CCEEEEEEECC--ch-hhHhhC
Confidence 4568899999999988763 588999999999999999999999999999752 25999999985 34 789999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCCCCC
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYGLD 181 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~~l~ 181 (516)
+|.++||+++|++|... .+..|.|.++.++|.+||.+++.....+.
T Consensus 422 ~v~~~Pt~~~~~~~~~~-----------~~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 467 (481)
T 3f8u_A 422 EVRGFPTIYFSPANKKL-----------NPKKYEGGRELSDFISYLQREATNPPVIQ 467 (481)
T ss_dssp CCCSSSEEEEECTTCTT-----------SCEECCSCCSHHHHHHHHHHHCSSCCCCC
T ss_pred CCcccCEEEEEeCCCeE-----------eeeEeCCCCCHHHHHHHHHHhcCCccccc
Confidence 99999999999876321 13568899999999999999987665543
No 102
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.32 E-value=3.1e-16 Score=130.78 Aligned_cols=103 Identities=24% Similarity=0.488 Sum_probs=86.2
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
+.+++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.+|++ ++.+++++|+|.
T Consensus 3 v~~l~~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~v~ 72 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKS-DKPVLVDFWAPWCGPCRMIAPIIEELAKEYE-------GKVKVVKVNVD--ENPNTAAQYGIR 72 (106)
Confidence 5678889998776443 5789999999999999999999999999885 35889999984 678899999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHh
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~ 173 (516)
++||+++|++|+. +..+.|..+.++|.++|++.
T Consensus 73 ~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 73 SIPTLLLFKNGQV-------------VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 9999999876633 34577888889999888764
No 103
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.54 E-value=3.2e-14 Score=138.34 Aligned_cols=108 Identities=17% Similarity=0.341 Sum_probs=90.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEec--CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---cccHH
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFA--NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KINTN 119 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA--~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~---d~~~~ 119 (516)
.+.++.|+.++|+..+.. ++++||+||| |||| +.|.|+++++.+.+. +.+.|+.|||+. +.+++
T Consensus 4 ~~~v~~Lt~~nF~~~i~~--~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-----~~v~~akVDvd~~g~~~~~~ 72 (240)
T 2qc7_A 4 TKGALPLDTVTFYKVIPK--SKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-----DDLLVAEVGISDYGDKLNME 72 (240)
T ss_dssp CTTCEECCTTHHHHHGGG--CSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-----TTEEEEEECCCCSSSCCSHH
T ss_pred CCCceECCHHHHHHHHcC--CCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-----CCeEEEEEeCCcccchhhHH
Confidence 346889999999998855 3789999999 9999 999999999999641 359999999642 35899
Q ss_pred HHHhCCCC--ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 120 LCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 120 l~~~~~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+|++|+|+ +|||+++|++|+. ..+..|.|.++.+.|.+||++++
T Consensus 73 l~~~~~V~~~~~PTl~~f~~G~~-----------~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 73 LSEKYKLDKESYPVFYLFRDGDF-----------ENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HHHHTTCCGGGCSEEEEEETTCS-----------SCCEECCSCSCHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCCEEEEEeCCCc-----------CcceeecCCCCHHHHHHHHHHhc
Confidence 99999999 9999999998742 02346889999999999999886
No 104
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.54 E-value=7.5e-15 Score=166.09 Aligned_cols=112 Identities=16% Similarity=0.320 Sum_probs=89.7
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH
Q 010178 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (516)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (516)
...+.++.|+.++|++.+.. ++++||+|||+||++|+++.|.|+++++.+. +.+.++.|||+ +++++|+
T Consensus 113 ~~~~~v~~l~~~~f~~~i~~--~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~-------~~v~~~~vd~~--~~~~l~~ 181 (780)
T 3apo_A 113 DDDPEIITLERREFDAAVNS--GELWFVNFYSPGSSHSHDLAPTWREFAKEVD-------GLLRIGAVNCG--DDRMLCR 181 (780)
T ss_dssp TTCTTEEECCHHHHHHHHTS--SSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEETT--TCSSCC-
T ss_pred CCCcceeeechHhHHhhhcC--CCcEEEEEeCCCCcchhHhhHHHHHHHHHhc-------CceEEEEEeCC--CcHHHHH
Confidence 34557899999999999944 4789999999999999999999999999986 34999999995 5678999
Q ss_pred hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 123 ~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
+|+|+++||+++|++|+. +..|.|.++.+.|.+|+.++++..+
T Consensus 182 ~~~v~~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~~~~~~ 224 (780)
T 3apo_A 182 MKGVNSYPSLFIFRSGMA-------------AVKYNGDRSKESLVAFAMQHVRSTV 224 (780)
T ss_dssp -------CEEEEECTTSC-------------CEECCSCSCHHHHHHHHHTTSCCCE
T ss_pred HcCCceeeeEEEEeCCcE-------------eeEecCCCCHHHHHHHHHHhchhhh
Confidence 999999999999988742 3568899999999999999887654
No 105
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.53 E-value=2.4e-14 Score=136.99 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=86.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
...+++++++..... .++.++|+|||+||++|+.+.|.++++++.+.+.+ .+.+.++.||++ ++.+++++|+|.
T Consensus 118 ~~~l~~~~~~~~~~~-~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~---~~~v~~~~vd~~--~~~~l~~~~~v~ 191 (226)
T 1a8l_A 118 ETNLMDETKQAIRNI-DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG---KGKILGDMVEAI--EYPEWADQYNVM 191 (226)
T ss_dssp CCCCCHHHHHHHTTC-CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT---CCCEEEEEEEGG--GCHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHhc-CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc---CCcEEEEEEEcc--cCHHHHHhCCCc
Confidence 445677777765433 23444999999999999999999999999985210 025999999984 688999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
++||+++|++|+ .+..+.|.++.++|.++|++.+
T Consensus 192 ~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 192 AVPKIVIQVNGE-------------DRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp SSCEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHH
T ss_pred ccCeEEEEeCCc-------------eeEEEcCCCCHHHHHHHHHHhh
Confidence 999999998763 2356789999999999998865
No 106
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.52 E-value=2.4e-14 Score=124.37 Aligned_cols=105 Identities=13% Similarity=0.186 Sum_probs=83.8
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecC-------CChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFAN-------WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----- 114 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~-------WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~----- 114 (516)
.+...+.++|++.+.+..+++++|+|||+ ||++|+.+.|.++++++.+. +.+.|+.||++.
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~~~~~~~~ 78 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQVGEKPYWK 78 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEECCCHHHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEECCCchhhh
Confidence 35667889999999875579999999999 99999999999999998875 359999999842
Q ss_pred cccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 115 KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 115 d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
+.+..++++|+|.++||+++|.++.. +..+.| .+.+.|.++|++
T Consensus 79 d~~~~~~~~~~i~~~Pt~~~~~~~~~-------------~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 79 DPNNDFRKNLKVTAVPTLLKYGTPQK-------------LVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CTTCHHHHHHCCCSSSEEEETTSSCE-------------EEGGGG-GCHHHHHHHHHC
T ss_pred chhHHHHHHCCCCeeCEEEEEcCCce-------------Eecccc-CCHHHHHHHHhc
Confidence 45788999999999999999876421 122222 567888888864
No 107
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.51 E-value=2.3e-14 Score=125.69 Aligned_cols=100 Identities=19% Similarity=0.305 Sum_probs=78.3
Q ss_pred ccHHHHHhc--CCCCeEEEEEecCCChhhhhhhHHHH--HHHHHhCCCCCCCCCeEEEEEEeccc-cccHHHHHhCCC--
Q 010178 54 TNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQYE--KVARLFNGPNAAHPGIILMTRVDCAL-KINTNLCDKFSV-- 126 (516)
Q Consensus 54 ~~f~~~l~~--~~~k~vlV~FyA~WC~~C~~~~P~~~--~la~~~~~~~~~~~~~v~~~~VDc~~-d~~~~l~~~~~I-- 126 (516)
.++++.+.. ..++++||+|||+||++|+.+.|.++ ++++.+. +.+.++.||++. +++.+++++|+|
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~l~~~~~v~~ 88 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA-------KHFEVVKIDVGNFDRNLELSQAYGDPI 88 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH-------HHCEEEEEECTTTTSSHHHHHHTTCGG
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc-------CCEEEEEEeCCcccchHHHHHHhCCcc
Confidence 445554432 22588999999999999999999999 9999885 358999999832 468899999999
Q ss_pred -CccCeEEEe-cCCcccCCCCCCCccccchhhccc-------cCCHHHHHHHHHHh
Q 010178 127 -GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED-------WQTADGLLTWINKQ 173 (516)
Q Consensus 127 -~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G-------~~~~e~L~~~i~~~ 173 (516)
.++||+++| ++|+.. ..+.| ..+.+++.+||++.
T Consensus 89 ~~~~Pt~~~~d~~G~~~-------------~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 89 QDGIPAVVVVNSDGKVR-------------YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp GGCSSEEEEECTTSCEE-------------EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCccceEEEECCCCCEE-------------EEecCCcccccccCCHHHHHHHHHHh
Confidence 999999999 666433 23334 57889999998764
No 108
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.51 E-value=5.3e-15 Score=128.71 Aligned_cols=108 Identities=21% Similarity=0.396 Sum_probs=88.2
Q ss_pred cCcceec-CcccHHHHHhcC--CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHH
Q 010178 45 VDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (516)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~--~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (516)
...+..+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--~~~~~~~ 82 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--DELKEVA 82 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--TTSGGGH
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--cchHHHH
Confidence 4456667 568999888652 35889999999999999999999999999874 378999998 4678999
Q ss_pred HhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 122 ~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
++|+|.++||+++|++|+.. ..+.| .+.+.|.++|++.+..
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~-------------~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 83 EKYNVEAMPTFLFIKDGAEA-------------DKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp HHHTCCSSCCCCBCTTTTCC-------------BCCCT-TCTTTHHHHHHHHTSS
T ss_pred HHcCCCccceEEEEeCCeEE-------------EEEeC-CCHHHHHHHHHHHHhc
Confidence 99999999999998776432 34566 5788999999988753
No 109
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.50 E-value=5.2e-14 Score=151.32 Aligned_cols=113 Identities=19% Similarity=0.420 Sum_probs=91.8
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
...+..+++++|+..+.+. ++++||+|||+|||||+.+.|.|+++++.+.... ..+.++.+|++. +. +.. |
T Consensus 357 ~~~v~~l~~~~f~~~v~~~-~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~--~~-~~~-~ 427 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVNDP-KKDVLVLYYAPWCGHCKRLAPTYQELADTYANAT----SDVLIAKLDHTE--ND-VRG-V 427 (504)
T ss_dssp SCSEEEECTTTHHHHHHCT-TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHC----SSCEEEEEEGGG--CC-CSS-C
T ss_pred cccceecccccHHHhhccC-CCCEEEEEECCCChhHHHHhHHHHHHHHHhhccC----CcEEEEEecCCc--cc-ccc-C
Confidence 4568999999999988654 5889999999999999999999999999985211 358999999853 33 334 9
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
+|+++||+++|++|+.. .+..|.|.++.++|.+||++++...
T Consensus 428 ~v~~~Pt~~~~~~G~~~-----------~~~~~~G~~~~~~l~~~i~~~~~~~ 469 (504)
T 2b5e_A 428 VIEGYPTIVLYPGGKKS-----------ESVVYQGSRSLDSLFDFIKENGHFD 469 (504)
T ss_dssp CCSSSSEEEEECCTTSC-----------CCCBCCSCCCHHHHHHHHHHHCTTC
T ss_pred CceecCeEEEEeCCcee-----------cceEecCCCCHHHHHHHHHhcCCCC
Confidence 99999999999887431 1356889999999999999987644
No 110
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.50 E-value=1.5e-14 Score=138.65 Aligned_cols=104 Identities=18% Similarity=0.306 Sum_probs=85.2
Q ss_pred Ccceec-CcccHHHHHhcC-CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 46 DHAVEL-NATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~-~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
..+..+ +.++|.+.+.+. +++++||.|||+||++|+.+.|.|.++++.+. .+.|+.||++ ++.++.+
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--------~v~f~~vd~~---~~~l~~~ 167 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--------MVKFCKIRAS---NTGAGDR 167 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--------TSEEEEEEHH---HHTCSTT
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--------CeEEEEEECC---cHHHHHH
Confidence 347777 889999988654 45899999999999999999999999999873 3899999984 6789999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccccCC-------HHHHHHHHHHh
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQT-------ADGLLTWINKQ 173 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~-------~e~L~~~i~~~ 173 (516)
|+|.++||+++|++|+.. ..+.|..+ .++|..+|.++
T Consensus 168 ~~i~~~PTl~~~~~G~~v-------------~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 168 FSSDVLPTLLVYKGGELI-------------SNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SCGGGCSEEEEEETTEEE-------------EEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEE-------------EEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999999887543 23444433 58899998764
No 111
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.48 E-value=5e-14 Score=137.32 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=85.7
Q ss_pred Ccceec-CcccHHHHHhc-CCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 46 DHAVEL-NATNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~-~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
..|..+ +.++|...+.+ .++++|||+|||+||++|+.+.|.|.++++.+. .+.|+.||++ . ..++.+
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~v~f~kVd~d--~-~~l~~~ 180 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------MVKFCKIKAS--N-TGAGDR 180 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------TSEEEEEEHH--H-HCCTTS
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CCEEEEEeCC--c-HHHHHH
Confidence 457788 78999999865 346899999999999999999999999999984 3899999984 2 678999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhccc-cCCHHHHHHHHHHh
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQ 173 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~e~L~~~i~~~ 173 (516)
|+|.++||+++|++|+....- .......| ..+.+.|..+|.++
T Consensus 181 ~~I~~~PTll~~~~G~~v~~~-------vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 181 FSSDVLPTLLVYKGGELLSNF-------ISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SCTTTCSEEEEEETTEEEEEE-------TTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEEEEE-------eCCcccccccccHHHHHHHHHHc
Confidence 999999999999988653210 00111112 25778899999775
No 112
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.48 E-value=6.3e-14 Score=112.45 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=71.0
Q ss_pred CeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCC
Q 010178 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~ 145 (516)
.+++|.||++||++|+.+.|.++++++++. +.+.++.+|++ ++.+++++|||+++||+++ +|+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~--~G~~----- 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINVM--ENPQKAMEYGIMAVPTIVI--NGDV----- 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEESS--SSCCTTTSTTTCCSSEEEE--TTEE-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEECC--CCHHHHHHCCCcccCEEEE--CCEE-----
Confidence 467999999999999999999999999985 35999999984 5778999999999999988 5521
Q ss_pred CCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 146 EPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 146 ~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.+.|..+.++|.++|++.+
T Consensus 67 ----------~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 67 ----------EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp ----------ECCSSSSSHHHHHHHHHHC
T ss_pred ----------eeecCCCHHHHHHHHHHhC
Confidence 4678889999999998753
No 113
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.19 E-value=4.8e-15 Score=129.40 Aligned_cols=94 Identities=16% Similarity=0.315 Sum_probs=77.9
Q ss_pred CCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEec--CCc
Q 010178 65 ATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGS--PSK 139 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~--~g~ 139 (516)
++++||+|||+||++|+.+.|.+ +++++.+. +.+.++.||++.+++..++++|+|.++||+++|. +|+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~ 91 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGA 91 (130)
Confidence 58899999999999999999999 88888775 3588999998766788999999999999999984 343
Q ss_pred ccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 140 FVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 140 ~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
. ..+..+.|..+.+.|.++|++.++.
T Consensus 92 ~-----------~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 92 W-----------EEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 2 0035678888999999999887754
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.46 E-value=6.5e-14 Score=128.54 Aligned_cols=106 Identities=13% Similarity=0.222 Sum_probs=78.6
Q ss_pred ceecCcccHHHHHh--cCCCCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccccccHHH--
Q 010178 48 AVELNATNFDAVLR--DTPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNL-- 120 (516)
Q Consensus 48 v~~L~~~~f~~~l~--~~~~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l-- 120 (516)
....+..+|++.+. ..+++++||+|||+||++|+.+.+.+ .++.+.++ +.+.++.||++. +.++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~-------~~~~~v~v~~d~--~~~~~~ 98 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIIN-------NDYVLITLYVDN--KTPLTE 98 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEETTC--CCEEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-------CCEEEEEEecCc--ccccch
Confidence 34566778887664 23468999999999999999985544 55555554 248899999853 2222
Q ss_pred ------------------------HHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCC-HHHHHHHHHHhc
Q 010178 121 ------------------------CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQT 174 (516)
Q Consensus 121 ------------------------~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~-~e~L~~~i~~~l 174 (516)
+++|+|.++||++++ ++|++ +..+.|..+ .+++.++|++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~-------------~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 99 PVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNP-------------LNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCB-------------SSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCE-------------EeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999998 56643 344668888 999999998876
Q ss_pred c
Q 010178 175 S 175 (516)
Q Consensus 175 ~ 175 (516)
.
T Consensus 166 ~ 166 (172)
T 3f9u_A 166 E 166 (172)
T ss_dssp H
T ss_pred H
Confidence 4
No 115
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.46 E-value=8.3e-14 Score=111.75 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=69.9
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCCCC
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~ 147 (516)
.+|.||++||++|+.+.|.++++++++. +.+.++.+|++ ++.+++++|||+++||+++ +|+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~--~G~~------- 65 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDIM--VDREKAIEYGLMAVPAIAI--NGVV------- 65 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECTT--TCGGGGGGTCSSCSSEEEE--TTTE-------
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHhCCceeeCEEEE--CCEE-------
Confidence 5899999999999999999999999986 35889999984 6788999999999999998 5421
Q ss_pred CccccchhhccccCCHHHHHHHHHHhc
Q 010178 148 NQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 148 ~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.+.|..+.++|.++|++.+
T Consensus 66 --------~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 66 --------RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp --------EEECSSCCHHHHHHHHHHC
T ss_pred --------EEccCCCHHHHHHHHHHHh
Confidence 4678889999999998765
No 116
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.45 E-value=4.2e-13 Score=118.56 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=84.5
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------- 114 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------- 114 (516)
..++++.+..... ++++++|.||++||++|+.+.|.++++++.+.+ .+.|+.|+++.
T Consensus 15 ~~~~g~~~~~~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~ 85 (148)
T 2b5x_A 15 AWLNGEVTREQLI--GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-------QLNVVAVHMPRSEDDLDPGKIKETA 85 (148)
T ss_dssp EEESCCCCHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEECCCSTTTSSHHHHHHHH
T ss_pred ccccCcccchhhc--CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-------CcEEEEEEcCCCccccCHHHHHHHH
Confidence 4667777764433 458899999999999999999999999999863 38888898752
Q ss_pred -----------cccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 115 -----------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 115 -----------d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+.+..+++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 86 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 86 AEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQL-------------RHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBE-------------EEEEESCSTTHHHHHHHHHHHT
T ss_pred HHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcE-------------EEEecCCCCHHHHHHHHHHHHh
Confidence 456789999999999999998 55533 3456788899999999988765
No 117
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.44 E-value=2.9e-14 Score=121.10 Aligned_cols=75 Identities=16% Similarity=0.375 Sum_probs=61.4
Q ss_pred CeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc----ccHHHHHhCCCCccCeEEEecCCccc
Q 010178 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----INTNLCDKFSVGHYPMLLWGSPSKFV 141 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d----~~~~l~~~~~I~~~PTl~~f~~g~~~ 141 (516)
++++|+|||+|||+|+.++|.|+++++.+. .|||+.+ ++.+++++|+|+++||+++ +|+
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~-- 75 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-- 75 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE--
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE--
Confidence 556899999999999999999999986652 4555422 5789999999999999877 441
Q ss_pred CCCCCCCccccchhhccccCCHHHHHHHHH
Q 010178 142 AGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (516)
Q Consensus 142 ~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~ 171 (516)
.+.|.++.++|.+|+.
T Consensus 76 --------------~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 76 --------------TYTGVRSLEALAVASG 91 (106)
T ss_dssp --------------EEESCCCHHHHHHHHT
T ss_pred --------------EecCCCCHHHHHHHhC
Confidence 3778999999999884
No 118
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.43 E-value=2.1e-13 Score=123.31 Aligned_cols=101 Identities=16% Similarity=0.317 Sum_probs=77.9
Q ss_pred ccHHHHHh--cCCCCeEEEEEe-cCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEecccc---------ccH
Q 010178 54 TNFDAVLR--DTPATYAVVEFF-ANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALK---------INT 118 (516)
Q Consensus 54 ~~f~~~l~--~~~~k~vlV~Fy-A~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~d---------~~~ 118 (516)
.++.+.+. ...++++||+|| |+||++|+.+.|.+ .++++.+. ..+.++.||++.+ .+.
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-------~~~~~v~vd~~~~~~~~~~~~~~~~ 106 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-------VHLHMVEVDFPQKNHQPEEQRQKNQ 106 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEECCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-------CcEEEEEecCccccCCChhhHhhHH
Confidence 44555443 223588999999 99999999999999 77776653 3588999998642 346
Q ss_pred HHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccC--CHHHHHHHHHHhcc
Q 010178 119 NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 175 (516)
Q Consensus 119 ~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~--~~e~L~~~i~~~l~ 175 (516)
.++++|+|.++||++++ ++|+ .+..+ |.. +.+.+.++|++.+.
T Consensus 107 ~l~~~~~v~~~Pt~~~~d~~G~-------------~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 107 ELKAQYKVTGFPELVFIDAEGK-------------QLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HHHHHTTCCSSSEEEEECTTCC-------------EEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCEEEEEcCCCC-------------EEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 89999999999999999 5553 33456 777 89999999988765
No 119
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.43 E-value=5.1e-14 Score=121.08 Aligned_cols=93 Identities=13% Similarity=0.137 Sum_probs=70.2
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCC
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGS 144 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~ 144 (516)
.+.+||+|||+||++|+.+.|.+... +.... ....+.+..||.+.+...+++.+|+|.++||+++|.+|
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~---~~~~a--~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G------ 86 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQ---YPLTD--EGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD------ 86 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTT---GGGSH--HHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhh---HHHhh--hcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC------
Confidence 36789999999999999998654322 21000 00125678888865555789999999999999999877
Q ss_pred CCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 145 WEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 145 ~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+++.++.|....+.+.++|++.+.
T Consensus 87 -------~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 87 -------VESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp -------EEEEEEECCCCHHHHHHHHHHHHH
T ss_pred -------EEEeeecCCCCHHHHHHHHHHHHh
Confidence 455678999999999999988764
No 120
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.43 E-value=4e-13 Score=128.91 Aligned_cols=102 Identities=15% Similarity=0.184 Sum_probs=84.3
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
.+..+++++|+..+.. .++.++|+|||+||++|+.+.|.++++++.+. .+.++.||++ ++++++++|+|
T Consensus 119 ~~~~l~~~~~~~~~~~-~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--------~v~~~~vd~~--~~~~l~~~~~v 187 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVV-DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--------YITSKVIDAS--ENQDLAEQFQV 187 (229)
T ss_dssp TCCSCCHHHHHHHTTC-CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEEGG--GCHHHHHHTTC
T ss_pred CccCCCHHHHHHHHhc-CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--------CeEEEEEECC--CCHHHHHHcCC
Confidence 3567788888877643 33445889999999999999999999999872 4899999984 68899999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+++||+++ +|+ +..+.|.++.++|.++|++.++
T Consensus 188 ~~~Pt~~~--~G~--------------~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 188 VGVPKIVI--NKG--------------VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp CSSSEEEE--GGG--------------TEEEESCCCHHHHHHHHHHHHH
T ss_pred cccCEEEE--CCE--------------EEEeeCCCCHHHHHHHHHHHhh
Confidence 99999988 442 2447899999999999988765
No 121
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.40 E-value=8.8e-13 Score=114.58 Aligned_cols=104 Identities=21% Similarity=0.323 Sum_probs=80.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (516)
+..++++.+.. .+..+++++|.||++||++|+.+.|.++++++.+. .+.++.|+++.
T Consensus 10 ~~~~~g~~~~l--~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~ 79 (136)
T 1zzo_A 10 AKTLDGHDFHG--ESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAGLDQVPAMQEFVNKYP 79 (136)
T ss_dssp EEBTTSCEEEG--GGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSSCHHHHHHHHHHTT
T ss_pred cccCCCCEeeH--HHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeCCCCHHHHHHHHHHcC
Confidence 34444544442 22245889999999999999999999999999885 37888898853
Q ss_pred --------cccHHHHHhCCCCccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 115 --------KINTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 115 --------d~~~~l~~~~~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+.+..++++|+|.++||++++. +|+ .+ .+.|..+.++|.++|++.++
T Consensus 80 ~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~-------------i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 80 VKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN-------------VD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCC-------------EE-EEESCCCHHHHHHHHHHHC-
T ss_pred CCceEEEEcCCcHHHHHcCCCCCceEEEECCCCC-------------EE-EEecCCCHHHHHHHHHHHhc
Confidence 3467899999999999999984 442 23 57788899999999988764
No 122
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.40 E-value=7.7e-13 Score=116.58 Aligned_cols=104 Identities=10% Similarity=0.165 Sum_probs=87.6
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
.+.+++.++|+..+.. +.+++|+|||+ |++|+.+.|.++++|++|. +++.|+.||. ++++.++.+|||
T Consensus 7 lv~~~t~~~f~~~~~~--~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~-------gk~~f~~vd~--d~~~~~a~~~gi 74 (133)
T 2djk_A 7 LIGEIGPETYSDYMSA--GIPLAYIFAET-AEERKELSDKLKPIAEAQR-------GVINFGTIDA--KAFGAHAGNLNL 74 (133)
T ss_dssp CSEECCHHHHHHHHHT--TSCEEEEECSC-SSSHHHHHHHHHHHHHSST-------TTSEEEEECT--TTTGGGTTTTTC
T ss_pred ceeccChHHHHHHhcC--CCCEEEEEecC-hhhHHHHHHHHHHHHHHhC-------CeEEEEEEch--HHhHHHHHHcCC
Confidence 3778999999987643 37899999999 8999999999999999986 4699999996 578899999999
Q ss_pred Cc--cCeEEEecC--CcccCCCCCCCccccchhhc--cccCCHHHHHHHHHHhccc
Q 010178 127 GH--YPMLLWGSP--SKFVAGSWEPNQEKKEIRAL--EDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 127 ~~--~PTl~~f~~--g~~~~~~~~~~~~~~~v~~~--~G~~~~e~L~~~i~~~l~~ 176 (516)
++ +||+++|.. |+ . ..+ .|..+.+.|.+||++.+..
T Consensus 75 ~~~~iPtl~i~~~~~g~-------------~-~~~~~~g~~~~~~l~~fi~~~l~G 116 (133)
T 2djk_A 75 KTDKFPAFAIQEVAKNQ-------------K-FPFDQEKEITFEAIKAFVDDFVAG 116 (133)
T ss_dssp CSSSSSEEEEECTTTCC-------------B-CCCCSSSCCCHHHHHHHHHHHHHT
T ss_pred CcccCCEEEEEecCcCc-------------c-cCCCCccccCHHHHHHHHHHHHcC
Confidence 99 999999976 32 1 123 3889999999999998754
No 123
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.40 E-value=1.3e-12 Score=127.20 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=81.6
Q ss_pred cCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccC
Q 010178 51 LNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (516)
Q Consensus 51 L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~P 130 (516)
++.+.++. +.+..++++++.|||+|||||+.+.|.|++++..+...+ .+.|.+..||++ ++++++++|+|+++|
T Consensus 125 l~~~~~~~-~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~---~~~v~~~~vd~~--~~~~~~~~~~V~~vP 198 (243)
T 2hls_A 125 LEDATKEA-LKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQG---NPVILSEAVEAY--ENPDIADKYGVMSVP 198 (243)
T ss_dssp CCHHHHHH-HHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTT---CCCEEEEEEETT--TCHHHHHHTTCCSSS
T ss_pred CCHHHHHH-HHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccccc---CCcEEEEEEECc--cCHHHHHHcCCeeeC
Confidence 34444443 333345677999999999999999999999999983100 024899999984 578999999999999
Q ss_pred eEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCCC
Q 010178 131 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYG 179 (516)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~~ 179 (516)
|+++ +|+ . .+.|.++.++|+++|.+.++....
T Consensus 199 t~~i--~G~-------------~--~~~G~~~~~~l~~~l~~~~~~~~~ 230 (243)
T 2hls_A 199 SIAI--NGY-------------L--VFVGVPYEEDFLDYVKSAAEGRLT 230 (243)
T ss_dssp EEEE--TTE-------------E--EEESCCCHHHHHHHHHHHHTTCCC
T ss_pred eEEE--CCE-------------E--EEeCCCCHHHHHHHHHHHhhcccc
Confidence 9988 442 1 278999999999999999876443
No 124
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.39 E-value=9e-13 Score=114.82 Aligned_cols=89 Identities=17% Similarity=0.311 Sum_probs=73.5
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------cccHHHHHh
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------KINTNLCDK 123 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------d~~~~l~~~ 123 (516)
++++++|.||++||++|+.+.|.++++++++. .+.++.|+++. +.+..++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 94 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWAR 94 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHh
Confidence 45889999999999999999999999999985 37889999854 236789999
Q ss_pred CCCCccCeEEEec-CCcccCCCCCCCccccchhhcc---ccCCHHHHHHHHHHhc
Q 010178 124 FSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALE---DWQTADGLLTWINKQT 174 (516)
Q Consensus 124 ~~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~---G~~~~e~L~~~i~~~l 174 (516)
|+|.++||++++. +|+ .+ .+. |..+.++|.++|++.+
T Consensus 95 ~~i~~~P~~~lid~~G~-------------i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 95 YNVPWQPAFVFYRADGT-------------ST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTCCSSSEEEEECTTSC-------------EE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEECCCCc-------------EE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999999984 443 22 456 8889999999998754
No 125
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.38 E-value=1.9e-12 Score=115.68 Aligned_cols=97 Identities=19% Similarity=0.307 Sum_probs=78.2
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc----------------------ccc
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------------------KIN 117 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~----------------------d~~ 117 (516)
+.+.+++++||+|||+||++|+.+.|.++++++++.+ ..+.++.|+++. ...
T Consensus 19 l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (151)
T 3raz_A 19 LQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK------GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANS 92 (151)
T ss_dssp GGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT------TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCH
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccch
Confidence 3444579999999999999999999999999999864 348999999852 134
Q ss_pred HHHHHhCC--CCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 118 TNLCDKFS--VGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 118 ~~l~~~~~--I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
..+++.|+ |.++||++++ ++|+ .+..+.|..+.++|.++|++...
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~-------------i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCG-------------YRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTT-------------EEEECCSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHhCCccCCCCEEEEECCCCc-------------EEEEECCCCCHHHHHHHHHHHHH
Confidence 56888999 9999998887 4553 33567889999999999987764
No 126
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.38 E-value=8.8e-13 Score=116.03 Aligned_cols=88 Identities=16% Similarity=0.373 Sum_probs=74.1
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------cccHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTNL 120 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~~~l 120 (516)
+++++||.||++||++|+.+.|.++++++++.+ ..+.|+.|+++. +.+..+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS------DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGEL 106 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC------SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC------CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhH
Confidence 568999999999999999999999999999864 348999999864 346789
Q ss_pred HHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHH
Q 010178 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 121 ~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
++.|+|.++||++++ ++|++ +..+.|..+.+.|.++|
T Consensus 107 ~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 107 MKEYHIITIPTSFLLNEKGEI-------------EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHTTCCEESEEEEECTTCCE-------------EEEEESCCCHHHHHHHH
T ss_pred HHhcCcCccCeEEEEcCCCcE-------------EEEEcCCcCHHHHHHhh
Confidence 999999999999998 55533 34577889999998876
No 127
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.38 E-value=8.2e-13 Score=112.29 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=76.7
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHH----HHH
Q 010178 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN----LCD 122 (516)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~----l~~ 122 (516)
...+ +.++|++.+.. +++++|.|+|+|||+|+.+.|.|+++++. . .+.++.||. +++++ ++.
T Consensus 8 ~~~i~s~e~f~~ii~~--~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--------~v~~~~vdV--de~r~~Sn~IA~ 74 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEE--NKYVFVLKHSETCPISANAYDQFNKFLYE-R--------DMDGYYLIV--QQERDLSDYIAK 74 (112)
T ss_dssp EEECCSHHHHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--------TCCEEEEEG--GGGHHHHHHHHH
T ss_pred eeecCCHHHHHHHHhc--CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--------CceEEEEEe--ecCchhhHHHHH
Confidence 3344 46779998876 48999999999999999999999999985 2 378999997 45655 899
Q ss_pred hCCCCc-cCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHH
Q 010178 123 KFSVGH-YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 123 ~~~I~~-~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
+|||++ .||+++|++|+... ..-.+..+.+.|.+.+
T Consensus 75 ~~~V~h~sPq~il~k~G~~v~------------~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 75 KTNVKHESPQAFYFVNGEMVW------------NRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHTCCCCSSEEEEEETTEEEE------------EEEGGGCSHHHHHHHT
T ss_pred HhCCccCCCeEEEEECCEEEE------------EeeccccCHHHHHHhh
Confidence 999995 99999999986442 1234667777776543
No 128
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.37 E-value=1.3e-12 Score=116.53 Aligned_cols=94 Identities=14% Similarity=0.305 Sum_probs=77.4
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--------------------ccHHHHHh
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------INTNLCDK 123 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--------------------~~~~l~~~ 123 (516)
+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+ .+..+++.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDA 98 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHh
Confidence 468999999999999999999999999999964 2488889987532 15689999
Q ss_pred CCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 124 ~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
|+|.++||++++ ++|+ .+..+.|..+.++|.++|++.+..
T Consensus 99 ~~v~~~P~~~lid~~G~-------------i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 99 YDVSPLPTTFLINPEGK-------------VVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp TTCCSSCEEEEECTTSE-------------EEEEEESCCCHHHHHHHHHHHSCC
T ss_pred cCCCCCCeEEEECCCCc-------------EEEEEeCCCCHHHHHHHHHHHHhh
Confidence 999999999888 4553 334567888999999999988754
No 129
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.37 E-value=8.7e-13 Score=119.18 Aligned_cols=108 Identities=15% Similarity=0.197 Sum_probs=82.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc-------------
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA------------- 113 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~------------- 113 (516)
.+..++++.+. +...+++++||+|||+||++|+.+.|.++++++++... .+.|+.|+++
T Consensus 22 ~l~~~~g~~~~--~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~~~~~~~~~~~~~~~ 93 (164)
T 2h30_A 22 TMKTADNRPAS--VYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS------SANLITVASPGFLHEKKDGEFQK 93 (164)
T ss_dssp TCEETTSSBGG--GGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT------TSEEEEEECTTSTTCCCTTHHHH
T ss_pred ccCCCCCCEee--HHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC------CcEEEEEEcCCCccccCHHHHHH
Confidence 45666776666 34445689999999999999999999999999987542 2555555531
Q ss_pred -------------ccccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 114 -------------LKINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 114 -------------~d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
.+.+..++++|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 94 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 94 WYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDV-------------QRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCE-------------EEEEESCCCHHHHHHHHHCTTC
T ss_pred HHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHH
Confidence 1345689999999999999998 45533 3456788999999999988764
No 130
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.36 E-value=2.1e-12 Score=146.09 Aligned_cols=113 Identities=19% Similarity=0.415 Sum_probs=94.9
Q ss_pred CcceecCcccHHHHHhcCC-CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 46 DHAVELNATNFDAVLRDTP-ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~-~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
+.+..|+.++|++.+.+.+ ++.++|.||||||+||+.+.|.|+++|+.++ +.+.|+.+||+ .+..+|++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~-------~~v~~~~vd~~--~~~~l~~~~ 613 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLT-------GLINVGSVDCG--QYHSFCTQE 613 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEETT--TTHHHHHHT
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CCeEEEEEECc--chHHHHHHc
Confidence 5688999999999887643 4678999999999999999999999999997 35999999995 578899999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhccc-cCCHHHHHHHHHHhccc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTSR 176 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~e~L~~~i~~~l~~ 176 (516)
+|++|||+++|++|.... .....|.| .++.++|.+||.+.+..
T Consensus 614 ~v~~~Pti~~~~~~~~~~---------~~~~~y~g~~~~~~~l~~fi~~~~~~ 657 (780)
T 3apo_A 614 NVQRYPEIRFYPQKSSKA---------YQYHSYNGWNRDAYSLRSWGLGFLPQ 657 (780)
T ss_dssp TCCSSSEEEEECCCSSSC---------CSCEECCCSCCSHHHHHHHHHTTSCC
T ss_pred CCCCCCeEEEEcCCCcCc---------cchhhcCCCCCCHHHHHHHHhhhccc
Confidence 999999999998763210 12345788 89999999999988754
No 131
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.35 E-value=3.1e-12 Score=115.04 Aligned_cols=93 Identities=17% Similarity=0.260 Sum_probs=75.2
Q ss_pred CCCeEEEEEecCCChhhhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEecc--------------------------ccc
Q 010178 64 PATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------LKI 116 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~-~P~~~~la~~~~~~~~~~~~~v~~~~VDc~--------------------------~d~ 116 (516)
+++++||+||++||++|+.+ .|.++++++++.+. .+.|+.|+++ .+.
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 102 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES------QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDM 102 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT------TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC------CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECC
Confidence 46899999999999999995 99999999999752 3888888862 123
Q ss_pred cHH------HHHhCCCCccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 117 NTN------LCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 117 ~~~------l~~~~~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
... +++.|+|.++||++++. +|+ .+..+.|..+.+.|.+.|++.+.
T Consensus 103 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~-------------i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 103 PREGQRIPSTMKKYRLEGTPSIILADRKGR-------------IRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CCTTCSSCHHHHHTTCCSSSEEEEECTTSB-------------EEEEEESCCCHHHHHHHHHHHHT
T ss_pred ccccchhhhHHHhcccCccceEEEECCCCc-------------EEEEecCcCCHHHHHHHHHHHHh
Confidence 334 89999999999999884 553 33556788999999999998875
No 132
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.35 E-value=3.2e-12 Score=115.38 Aligned_cols=106 Identities=13% Similarity=0.264 Sum_probs=81.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC---
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF--- 124 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~--- 124 (516)
+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++ .+.+.+++|
T Consensus 19 l~~~~g~~~~--l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~------~v~~v~v~~d--~~~~~~~~~~~~ 88 (165)
T 3or5_A 19 GVTVDGKPFS--SASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR------GFTFVGIAVN--EQLPNVKNYMKT 88 (165)
T ss_dssp EECTTSCEEE--GGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT------TEEEEEEECS--CCHHHHHHHHHH
T ss_pred eeCCCCCEec--hhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC------CeEEEEEECC--CCHHHHHHHHHH
Confidence 4445555544 33334689999999999999999999999999999742 3899999985 344555555
Q ss_pred ------------------------CCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 125 ------------------------SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 125 ------------------------~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+|.++||++++ ++|+ .+..+.|..+.++|.++|++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~-------------i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 89 QGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGN-------------VSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp HTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSB-------------EEEEECSCCCHHHHHHHHHHHHC-
T ss_pred cCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCc-------------EEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999998887 4553 335677889999999999998764
No 133
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.35 E-value=1.9e-12 Score=124.23 Aligned_cols=101 Identities=11% Similarity=0.094 Sum_probs=79.8
Q ss_pred ccHHHHH-hcCCCCeEEEEEe-----cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 54 TNFDAVL-RDTPATYAVVEFF-----ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 54 ~~f~~~l-~~~~~k~vlV~Fy-----A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
+.+++.+ .+.. ++++|.|| ++||+||+.+.|+|+++++++.+. +.|.++.|||+ +++++|++|+|+
T Consensus 9 ~~l~~~~~~~~~-~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~-----~~v~~~~vd~~--~~~~l~~~~~v~ 80 (229)
T 2ywm_A 9 MQLKELAQKEFK-EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ-----DKIKLDIYSPF--THKEETEKYGVD 80 (229)
T ss_dssp HHHHHHHHHHCC-SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT-----TTEEEEEECTT--TCHHHHHHTTCC
T ss_pred HHHHHHHHHhcc-CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC-----CceEEEEecCc--ccHHHHHHcCCC
Confidence 4455666 3443 45566666 899999999999999999888431 46999999994 689999999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|||+++|++|. ....|.|.++.+++.+|+.+.+.
T Consensus 81 ~~Ptl~~~~~~~-------------~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 81 RVPTIVIEGDKD-------------YGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp BSSEEEEESSSC-------------CCEEEESCCCTTHHHHHHHHHHH
T ss_pred cCcEEEEECCCc-------------ccceecCCccHHHHHHHHHHHHh
Confidence 999999997532 23568899999999999988653
No 134
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.34 E-value=4.5e-12 Score=113.83 Aligned_cols=95 Identities=17% Similarity=0.113 Sum_probs=75.9
Q ss_pred cCCCCeEEEEEecCCChhhhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEecc--------------------------c
Q 010178 62 DTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------L 114 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~-~P~~~~la~~~~~~~~~~~~~v~~~~VDc~--------------------------~ 114 (516)
+.+++++||+|||+||++|+.+ .|.++++++++.+ ..+.|+.|+++ .
T Consensus 25 ~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 25 DLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE------DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT------TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred HhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc------CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 3346899999999999999997 9999999999974 24889888863 1
Q ss_pred cccH-----HHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 115 KINT-----NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 115 d~~~-----~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+.+. .+++.|+|.++||++++ ++|+ .+..+.|..+.+.|.+.|++.+.
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~-------------i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDKAGD-------------LRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECTTSE-------------EEEEEESCCCHHHHHHHHHHHHT
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECCCCC-------------EEEEEeCCCCHHHHHHHHHHHhc
Confidence 1222 58999999999998887 4553 33556788999999999998875
No 135
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.34 E-value=1.7e-12 Score=124.15 Aligned_cols=103 Identities=10% Similarity=0.156 Sum_probs=81.3
Q ss_pred cccHHHHH-hcCCCCeEEEEEecC-CChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccC
Q 010178 53 ATNFDAVL-RDTPATYAVVEFFAN-WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (516)
Q Consensus 53 ~~~f~~~l-~~~~~k~vlV~FyA~-WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~P 130 (516)
.+.+++.+ ....+..++|.||++ ||++|+.+.|.|+++++. . +.+.++.|||+..+++++|++|||+++|
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~-------~~v~~~~vd~~~~~~~~~~~~~~v~~~P 80 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T-------DKLSYEIVDFDTPEGKELAKRYRIDRAP 80 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C-------TTEEEEEEETTSHHHHHHHHHTTCCSSS
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C-------CceEEEEEeCCCcccHHHHHHcCCCcCc
Confidence 45566666 444456778999999 999999999999999864 2 4599999999643379999999999999
Q ss_pred eEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 131 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+++|++|+.. ...|.|.++.+.+.+|+...+.
T Consensus 81 t~~~~~~g~~~------------~~~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 81 ATTITQDGKDF------------GVRYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp EEEEEETTBCC------------SEEEESCCCTTHHHHHHHHHHH
T ss_pred eEEEEcCCcee------------eEEEeccCcHHHHHHHHHHHHh
Confidence 99999776321 1457788888899999887653
No 136
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.33 E-value=6.5e-13 Score=121.47 Aligned_cols=108 Identities=15% Similarity=0.207 Sum_probs=72.3
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHH-HHHhCCC--CccC
Q 010178 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-LCDKFSV--GHYP 130 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~-l~~~~~I--~~~P 130 (516)
+.|+..... ++++||+|||+||++|+.+.|.++++++.+. ..+.|+.||++. +.. ++..|++ .++|
T Consensus 37 ~~~~~~~~~--~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~-------~~~~~~~v~~d~--~~~~~~~~~~~~~~~~P 105 (164)
T 1sen_A 37 DGKKEAAAS--GLPLMVIIHKSWCGACKALKPKFAESTEISE-------LSHNFVMVNLED--EEEPKDEDFSPDGGYIP 105 (164)
T ss_dssp HHHHHHHHH--TCCEEEEEECTTCHHHHHHHHHHHTCHHHHH-------HHTTSEEEEEEG--GGSCSCGGGCTTCSCSS
T ss_pred HHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhh-------cCCeEEEEEecC--CchHHHHHhcccCCcCC
Confidence 455555544 4889999999999999999999999877653 225567777743 334 7788888 6699
Q ss_pred eEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 131 MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 131 Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+++| ++|+......... ..........+.+.|+++|++.+.
T Consensus 106 t~~~~d~~G~~~~~~~G~~---~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 106 RILFLDPSGKVHPEIINEN---GNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp EEEEECTTSCBCTTCCCTT---SCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEEeCCC---CccchhcccCCHHHHHHHHHHHHH
Confidence 99999 6775442100000 000000114789999999988764
No 137
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.33 E-value=3.7e-12 Score=113.46 Aligned_cols=108 Identities=18% Similarity=0.355 Sum_probs=82.5
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-----------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------- 116 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~----------- 116 (516)
+..++++.+. +.+..++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+.
T Consensus 15 l~~~~g~~~~--l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 86 (152)
T 2lja_A 15 YPDINGKTVS--LADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAG------KDIHFVSLSCDKNKKAWENMVTKDQ 86 (152)
T ss_dssp EEETTTEEEE--STTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT------SSEEEEEEECCSCHHHHHHHHHHHT
T ss_pred eecCCCCEee--HHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc------CCeEEEEEEccCcHHHHHHHHHhcC
Confidence 3344444433 3334568999999999999999999999999999864 24889999986432
Q ss_pred ----------cHHHHHhCCCCccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 117 ----------NTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 117 ----------~~~l~~~~~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+..+++.|+|.++||++++. +|++ +..+.|..+.+.|.++|++.++.
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 87 LKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKI-------------ISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp CCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCE-------------EESSCCCTTCHHHHHHHHHHHTC
T ss_pred CCCceeecCcchhHHHHcCcCCCCEEEEECCCCeE-------------EEccCCCCCHHHHHHHHHHHhcc
Confidence 23789999999999999986 5533 34466788899999999988764
No 138
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.33 E-value=3.1e-12 Score=113.01 Aligned_cols=90 Identities=10% Similarity=0.275 Sum_probs=71.9
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHh-CCCCCCCCCeEEEEEEeccccc-----------------------cHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI-----------------------NTN 119 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~-~~~~~~~~~~v~~~~VDc~~d~-----------------------~~~ 119 (516)
+++++||.||++||++|+.+.|.+.++++++ .+ ..+.++.|+++.+. +..
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 105 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN------KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSE 105 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC------TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC------CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchH
Confidence 5689999999999999999999999999999 54 23889999876433 568
Q ss_pred HHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 120 LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 120 l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+++.|+|.++||++++ ++|++. ..+ .+.+++.+.|++.+.
T Consensus 106 ~~~~~~v~~~P~~~lid~~G~i~-------------~~~---~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 106 TAKQYAILTLPTNILLSPTGKIL-------------ARD---IQGEALTGKLKELLK 146 (148)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEE-------------EES---CCHHHHHHHHHHHC-
T ss_pred HHHhcCCCCcCEEEEECCCCeEE-------------Eec---CCHHHHHHHHHHHHc
Confidence 9999999999999998 555432 111 278888888887764
No 139
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.32 E-value=2.9e-12 Score=100.90 Aligned_cols=74 Identities=5% Similarity=0.137 Sum_probs=60.9
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCCCC
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~ 147 (516)
..|+|||+||++|+.+.|.++++++.+. +.+.++.|| +.+++++|+|+++||+++ +|+..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~G~~~------ 61 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKIK-----EMDQILEAGLTALPGLAV--DGELK------ 61 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEEC-----SHHHHHHHTCSSSSCEEE--TTEEE------
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEec-----CHHHHHHCCCCcCCEEEE--CCEEE------
Confidence 3689999999999999999999999985 358888888 578999999999999988 55321
Q ss_pred CccccchhhccccC-CHHHHHHHH
Q 010178 148 NQEKKEIRALEDWQ-TADGLLTWI 170 (516)
Q Consensus 148 ~~~~~~v~~~~G~~-~~e~L~~~i 170 (516)
..|.. +.++|.++|
T Consensus 62 ---------~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 62 ---------IMGRVASKEEIKKIL 76 (77)
T ss_dssp ---------ECSSCCCHHHHHHHC
T ss_pred ---------EcCCCCCHHHHHHHh
Confidence 12776 888888765
No 140
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.32 E-value=4e-12 Score=110.19 Aligned_cols=89 Identities=17% Similarity=0.374 Sum_probs=71.8
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------ccc
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KIN 117 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~~ 117 (516)
+++++||.||++||++|+.+.|.++++++++. +.+.++.|++.. +.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 93 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAG-------DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS 93 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-------TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc
Confidence 46899999999999999999999999999853 357888885421 335
Q ss_pred HHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 118 TNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 118 ~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
..+++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKL-------------VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCE-------------EEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcE-------------EEeecCCCcHHHHHHHHHh
Confidence 679999999999999998 55533 3456788999999998875
No 141
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.32 E-value=2.4e-12 Score=118.23 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=63.9
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC---C
Q 010178 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS---V 126 (516)
Q Consensus 50 ~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~---I 126 (516)
.++++.+. .+.+.++++++|+|||+|||+|+.+.|.++++++.+. .+.|..||. +++++++.+|+ |
T Consensus 40 ~~~~~~~~-~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--------~v~~~~v~~--d~~~~~~~~~~~~~v 108 (167)
T 1z6n_A 40 GLPSALTE-RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--------NIELAIISK--GRAEDDLRQRLALER 108 (167)
T ss_dssp CCCHHHHH-HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--------TEEEEEECH--HHHHHHTTTTTTCSS
T ss_pred CCCHHHHH-HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CcEEEEEEC--CCCHHHHHHHHHcCC
Confidence 45554444 4555556899999999999999999999999998863 388999996 56788999997 9
Q ss_pred CccCeEEEecCC
Q 010178 127 GHYPMLLWGSPS 138 (516)
Q Consensus 127 ~~~PTl~~f~~g 138 (516)
+++||+++|.+|
T Consensus 109 ~~iPt~i~~~~~ 120 (167)
T 1z6n_A 109 IAIPLVLVLDEE 120 (167)
T ss_dssp CCSSEEEEECTT
T ss_pred CCcCeEEEECCC
Confidence 999999999764
No 142
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.29 E-value=3.9e-12 Score=112.40 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=77.2
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHH---------
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN--------- 119 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~--------- 119 (516)
..+++..+. +.+.+++++||.||++||++|+.+.|.++++++.+.+. .+.|+.|+++. +.+
T Consensus 17 ~~~~g~~~~--l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~v~v~~d~--~~~~~~~~~~~~ 86 (148)
T 3hcz_A 17 TDTTGTYRY--LYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK------GIQVYAANIER--KDEEWLKFIRSK 86 (148)
T ss_dssp BCTTSCBCC--GGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG------TEEEEEEECCS--SSHHHHHHHHHH
T ss_pred ecCCCCEEE--hHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC------CEEEEEEEecC--CHHHHHHHHHHc
Confidence 334444443 34445789999999999999999999999999999742 38999999853 333
Q ss_pred ----------------HHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 120 ----------------LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 120 ----------------l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+++.|+|.++||++++ ++|++ +..+.|..+.+.+++.+.+.+
T Consensus 87 ~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i-------------~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 87 KIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVI-------------IAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp TCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBE-------------EEESCCGGGHHHHHHHHHHHH
T ss_pred CCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcE-------------EEecCCHHHHHHHHHHHHHHh
Confidence 8999999999999998 55543 234566677777777776554
No 143
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.28 E-value=8.8e-12 Score=111.50 Aligned_cols=91 Identities=18% Similarity=0.300 Sum_probs=71.8
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-----------------------cHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTNL 120 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~-----------------------~~~l 120 (516)
+++++||+||++||++|+.+.|.++++++++.+. .+.++.|+++.+. +..+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK------GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDV 101 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT------TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHH
Confidence 4689999999999999999999999999999742 3889999986321 5789
Q ss_pred HHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 121 ~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
++.|+|.++||++++ ++|++. ..+ .+.++|.++|++.+..
T Consensus 102 ~~~~~v~~~P~~~lid~~G~i~-------------~~~---~~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 102 LESYCIVGFPHIILVDPEGKIV-------------AKE---LRGDDLYNTVEKFVNG 142 (152)
T ss_dssp HHHTTCCSSCEEEEECTTSEEE-------------EEC---CCTTHHHHHHHHHHTS
T ss_pred HHHhCCCcCCeEEEECCCCeEE-------------Eee---CCHHHHHHHHHHHHhh
Confidence 999999999999988 566443 122 3456788888777653
No 144
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.28 E-value=6.3e-12 Score=112.08 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=76.1
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc---------------------ccccHHHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCD 122 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~---------------------~d~~~~l~~ 122 (516)
+++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+.+ .+.+..+++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK------NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQ 100 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT------TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC------CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHH
Confidence 3589999999999999999999999999999742 3777777642 134667999
Q ss_pred hCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 123 ~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
.|+|.++||++++ ++|++ +..+.|..+.+.|.++|++.+..
T Consensus 101 ~~~i~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 101 AFGTQVYPTSVLIGKKGEI-------------LKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp HHTCCSSSEEEEECSSSCC-------------CEEEESSCCHHHHHHHHHHHHHC
T ss_pred HcCCCccCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHHh
Confidence 9999999999988 45533 34577889999999999988764
No 145
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.26 E-value=8.4e-12 Score=109.94 Aligned_cols=93 Identities=11% Similarity=0.310 Sum_probs=68.7
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHH---HHHHhCCCCCCCCCeEEEEEEeccccc--------------------
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKI-------------------- 116 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~---la~~~~~~~~~~~~~v~~~~VDc~~d~-------------------- 116 (516)
+.+.+++++||+|||+||++|+.+.|.+.+ +++.+.+ ..+.++.|+++.+.
T Consensus 22 l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~ 95 (142)
T 3ewl_A 22 MSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNK 95 (142)
T ss_dssp GGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECT
T ss_pred hhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCC
Confidence 344457999999999999999999999998 8888864 23889999875321
Q ss_pred cHHH--HHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 117 NTNL--CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l--~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+..+ .+.|+|.++||++++ ++|++. .+..+.++|.++|++..
T Consensus 96 ~~~~~~~~~~~v~~~P~~~lid~~G~i~----------------~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 96 AGDIRTRQLYDIRATPTIYLLDGRKRVI----------------LKDTSMEQLIDYLATQA 140 (142)
T ss_dssp TCHHHHTTCSCCCSSSEEEEECTTCBEE----------------ECSCCHHHHHHHHHC--
T ss_pred ccchhhHHHcCCCCCCeEEEECCCCCEE----------------ecCCCHHHHHHHHHHHc
Confidence 1112 348999999999998 455332 24578899999988754
No 146
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.26 E-value=1e-11 Score=112.16 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=61.8
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHH---HHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEec-CCcc
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVA---RLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGS-PSKF 140 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la---~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~-~g~~ 140 (516)
++++||+|||+||++|+.+.|.+.+.. +..+ ..|+.|+++ +++.+++.+|+|.++||++||. +|+.
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---------~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---------NKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---------HTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---------cCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 589999999999999999999998643 2221 124445543 2345678899999999999997 6654
Q ss_pred cCCCCCCCccccchhhcccc----------CCHHHHHHHHHHhcc
Q 010178 141 VAGSWEPNQEKKEIRALEDW----------QTADGLLTWINKQTS 175 (516)
Q Consensus 141 ~~~~~~~~~~~~~v~~~~G~----------~~~e~L~~~i~~~l~ 175 (516)
.. .+.|. .+.+.+++.+++.+.
T Consensus 114 v~-------------~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 114 RA-------------DIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp CT-------------TCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred EE-------------EEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 32 23333 556777777776654
No 147
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.25 E-value=1.3e-11 Score=109.28 Aligned_cols=87 Identities=17% Similarity=0.251 Sum_probs=67.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc------------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------ 115 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d------------ 115 (516)
+..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++.+. ..+.++.|+++.+
T Consensus 13 l~~~~g~~~~--l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~ 85 (144)
T 1i5g_A 13 VLKGAAADIA--LPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-----KNFEVMLISWDESAEDFKDYYAKMP 85 (144)
T ss_dssp EEETTEEEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCSSHHHHHHHHTTCS
T ss_pred EEcCCCCEec--HHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-----CCEEEEEEeCCCCHHHHHHHHHhCC
Confidence 4455555544 33334689999999999999999999999999999731 2488888888642
Q ss_pred ----------ccHHHHHhCCCCccCeEEEec--CCccc
Q 010178 116 ----------INTNLCDKFSVGHYPMLLWGS--PSKFV 141 (516)
Q Consensus 116 ----------~~~~l~~~~~I~~~PTl~~f~--~g~~~ 141 (516)
.+..++++|+|.++||++++. +|++.
T Consensus 86 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 86 WLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNII 123 (144)
T ss_dssp SEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred ccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEE
Confidence 246799999999999999985 66543
No 148
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.24 E-value=2.9e-11 Score=107.58 Aligned_cols=97 Identities=15% Similarity=0.266 Sum_probs=74.2
Q ss_pred cCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--------------------cHHHH
Q 010178 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNLC 121 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--------------------~~~l~ 121 (516)
+.+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++.+. +..++
T Consensus 25 ~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 98 (152)
T 3gl3_A 25 DKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK------GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTP 98 (152)
T ss_dssp GGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG------TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHH
T ss_pred HhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC------CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhH
Confidence 334689999999999999999999999999999742 3888888875321 22688
Q ss_pred HhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhcccc--CCHHHHHHHHHHhcccC
Q 010178 122 DKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQTSRS 177 (516)
Q Consensus 122 ~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~--~~~e~L~~~i~~~l~~~ 177 (516)
+.|+|.++||++++ ++|++ +..+.|. .+.+.|.++|++.++..
T Consensus 99 ~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 99 RLYGVKGMPTSFLIDRNGKV-------------LLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HHTTCCSSSEEEEECTTSBE-------------EEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred HHcCCCCCCeEEEECCCCCE-------------EEEEccCCCcCHHHHHHHHHHHHccc
Confidence 99999999998887 55533 2345554 45689999999887643
No 149
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.23 E-value=2.1e-11 Score=108.95 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=75.1
Q ss_pred hcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc--c-----------------------c
Q 010178 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA--L-----------------------K 115 (516)
Q Consensus 61 ~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~--~-----------------------d 115 (516)
.+.+ +++||.||++||++|+.+.|.++++++++ + +.++.|+++ . +
T Consensus 27 ~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--------v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 96 (154)
T 3ia1_A 27 ATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--------VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRD 96 (154)
T ss_dssp TTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--------CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSC
T ss_pred HHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--------CeEEEEeCCCcccHHHHHHHHHHcCCCccccccccc
Confidence 3444 78999999999999999999999999998 3 567777761 0 2
Q ss_pred ccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 116 INTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 116 ~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
.+..+++.|+|.++|+++++ ++|+ .+..+.|..+.++|.++|++..+.
T Consensus 97 ~~~~~~~~~~v~~~P~~~lid~~G~-------------i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 97 RPHEVAARFKVLGQPWTFVVDREGK-------------VVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp CHHHHHTTSSBCSSCEEEEECTTSE-------------EEEEEESBCCHHHHHHHHHHTTCC
T ss_pred chHHHHHHhCCCcccEEEEECCCCC-------------EEEEEcCCCCHHHHHHHHHhccCc
Confidence 56789999999999998887 4553 335577889999999999988753
No 150
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.22 E-value=2.3e-11 Score=107.49 Aligned_cols=101 Identities=10% Similarity=0.097 Sum_probs=71.9
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHH---HHHHhCCCCCCCCCeEEEEEEecccccc-------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKIN------- 117 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~---la~~~~~~~~~~~~~v~~~~VDc~~d~~------- 117 (516)
+..++++.+. +.+.+++++||+|||+||++|+.+.|.+++ +++.+++ ..+.++.|+.+.+..
T Consensus 16 l~~~~g~~~~--l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~------~~~~vi~i~~d~~~~~~~~~~~ 87 (142)
T 3eur_A 16 YTLDSGVKGT--LYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA------KKLKVLSIYPDEELDEWKKHRN 87 (142)
T ss_dssp EEETTSCEEE--TTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT------TSEEEEEEECSSCHHHHHHHGG
T ss_pred EEcCCCCEee--HHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc------CCeEEEEEEcCCCHHHHHHHHH
Confidence 3344444432 444557999999999999999999999999 9999975 348888898753211
Q ss_pred ---------------HHHHHhCCCCccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 118 ---------------TNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 118 ---------------~~l~~~~~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
..+.+.|+|.++||++++. +|++. . ...+.++|.++|++
T Consensus 88 ~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~-------------~---~~~~~~~l~~~l~e 142 (142)
T 3eur_A 88 DFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVL-------------L---KDATLQKVEQYLAE 142 (142)
T ss_dssp GSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEE-------------E---EEECHHHHHHHHHC
T ss_pred hcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEE-------------e---cCCCHHHHHHHHhC
Confidence 1257889999999999884 44332 1 12357888888753
No 151
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.21 E-value=3.6e-11 Score=106.69 Aligned_cols=77 Identities=19% Similarity=0.349 Sum_probs=62.3
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc----------------------cc
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------IN 117 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d----------------------~~ 117 (516)
+.+.+++++||+|||+||++|+.+.|.++++++++.+. ..+.++.|+++.+ .+
T Consensus 23 l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~ 97 (146)
T 1o8x_A 23 VKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-----KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAV 97 (146)
T ss_dssp GGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHH
T ss_pred HHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-----CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHH
Confidence 33445689999999999999999999999999999731 2488888888642 24
Q ss_pred HHHHHhCCCCccCeEEEec--CCccc
Q 010178 118 TNLCDKFSVGHYPMLLWGS--PSKFV 141 (516)
Q Consensus 118 ~~l~~~~~I~~~PTl~~f~--~g~~~ 141 (516)
..++++|+|.++||++++. +|++.
T Consensus 98 ~~~~~~~~v~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 98 QKLSKHFNVESIPTLIGVDADSGDVV 123 (146)
T ss_dssp HHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHHhCCCCCCEEEEEECCCCeEE
Confidence 6799999999999999986 66543
No 152
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.19 E-value=3.9e-11 Score=109.44 Aligned_cols=76 Identities=21% Similarity=0.355 Sum_probs=61.5
Q ss_pred hcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc----------------------H
Q 010178 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN----------------------T 118 (516)
Q Consensus 61 ~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~----------------------~ 118 (516)
.+.+++++||+|||+||++|+.+.|.++++++++.+. ..+.|+.|+++.+.. .
T Consensus 44 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (165)
T 3s9f_A 44 DSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-----KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVE 118 (165)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred HHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-----CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHH
Confidence 3334689999999999999999999999999999742 248888888754322 6
Q ss_pred HHHHhCCCCccCeEEEec-C-Cccc
Q 010178 119 NLCDKFSVGHYPMLLWGS-P-SKFV 141 (516)
Q Consensus 119 ~l~~~~~I~~~PTl~~f~-~-g~~~ 141 (516)
.+++.|+|.++||++++. + |++.
T Consensus 119 ~l~~~~~v~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 119 ALTKKYSVESIPTLIGLNADTGDTV 143 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHcCCCCCCEEEEEeCCCCEEE
Confidence 899999999999999986 3 6543
No 153
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.19 E-value=4.9e-11 Score=107.41 Aligned_cols=107 Identities=16% Similarity=0.360 Sum_probs=77.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (516)
+..+++..+. +.+.+++++||.||++||++|+.+.|.++++++++.+ ..+.++.|+++.
T Consensus 26 l~~~~g~~~~--l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 97 (158)
T 3hdc_A 26 LPTLSGENKS--LAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK------GDLVVLAVNVEKRFPEKYRRAPVSF 97 (158)
T ss_dssp EECTTSCEEE--SGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST------TSEEEEEEECSSSCCGGGGGCCCSC
T ss_pred eEcCCCCEEe--hHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc------CCeEEEEEeCCHHHHHHHHHcCCCc
Confidence 3444444443 3333468999999999999999999999999999974 348999999853
Q ss_pred ----cccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhcccc--CCHHHHHHHHHHhcc
Q 010178 115 ----KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQTS 175 (516)
Q Consensus 115 ----d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~--~~~e~L~~~i~~~l~ 175 (516)
+.+..+++.|+|.++|+++++ ++|++ +..+.|. .+.+++++.+.+..+
T Consensus 98 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 98 NFLSDATGQVQQRYGANRLPDTFIVDRKGII-------------RQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEEECTTSHHHHHTTCCSSSEEEEECTTSBE-------------EEEEESCCCTTSHHHHHHHHTTC-
T ss_pred eEEECchHHHHHHhCCCCcceEEEEcCCCCE-------------EEEEeCCCccchHHHHHHHHhhcc
Confidence 236789999999999998776 45533 2345554 456677777765543
No 154
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.19 E-value=1.5e-11 Score=113.41 Aligned_cols=80 Identities=16% Similarity=0.284 Sum_probs=64.0
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHH-H--HHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC--
Q 010178 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQ-Y--EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-- 124 (516)
Q Consensus 50 ~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~-~--~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~-- 124 (516)
...++.|+..... +++|||+|||+||++|+.+.|+ | .++++.++ +.+.++.||. ++++++.+.|
T Consensus 26 ~~~~ea~~~A~~~--~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-------~~fv~ikVD~--de~~~l~~~y~~ 94 (173)
T 3ira_A 26 PWGEEAFEKARKE--NKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-------EAFVSIKVDR--EERPDIDNIYMT 94 (173)
T ss_dssp CSSHHHHHHHHHH--TCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-------HHCEEEEEET--TTCHHHHHHHHH
T ss_pred CcCHHHHHHHHHh--CCCEEEecccchhHhhccccccccCCHHHHHHHH-------hcCceeeeCC--cccCcHHHHHHH
Confidence 3456778777665 4899999999999999999993 3 56777775 3588899997 5678898888
Q ss_pred ------CCCccCeEEEec-CCcc
Q 010178 125 ------SVGHYPMLLWGS-PSKF 140 (516)
Q Consensus 125 ------~I~~~PTl~~f~-~g~~ 140 (516)
||.++||+++|. +|+.
T Consensus 95 ~~q~~~gv~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 95 VCQIILGRGGWPLNIIMTPGKKP 117 (173)
T ss_dssp HHHHHHSCCCSSEEEEECTTSCE
T ss_pred HHHHHcCCCCCcceeeECCCCCc
Confidence 999999999995 5653
No 155
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.19 E-value=7e-11 Score=105.30 Aligned_cols=91 Identities=14% Similarity=0.249 Sum_probs=71.2
Q ss_pred cCCCCeEEEEEecCCChh--hhhhhHHHHHHHHHh-CCCCCCCCCeEEEEEEeccccc----------------------
Q 010178 62 DTPATYAVVEFFANWCPA--CRNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI---------------------- 116 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~--C~~~~P~~~~la~~~-~~~~~~~~~~v~~~~VDc~~d~---------------------- 116 (516)
+.+++++||+||++||++ |+.+.|.+.++++++ .+ ..+.++.|+++.+.
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 103 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN------KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGG 103 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC------SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCG
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC------CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcc
Confidence 345689999999999999 999999999999999 54 24889999886432
Q ss_pred -cHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 117 -NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 117 -~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+..+++.|+|.++||++++ ++|++.. .+ .+.+++.+.|.+.+
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 104 LNSEVAKQYSIYKIPANILLSSDGKILA-------------KN---LRGEELKKKIENIV 147 (150)
T ss_dssp GGCHHHHHTTCCSSSEEEEECTTSBEEE-------------ES---CCHHHHHHHHHHHH
T ss_pred cchHHHHHcCCCccCeEEEECCCCEEEE-------------cc---CCHHHHHHHHHHHH
Confidence 3478999999999999998 5564431 12 26778888777655
No 156
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.18 E-value=2.6e-11 Score=120.66 Aligned_cols=83 Identities=18% Similarity=0.386 Sum_probs=64.2
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc----cccHHHHHhCCCCcc
Q 010178 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----KINTNLCDKFSVGHY 129 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~----d~~~~l~~~~~I~~~ 129 (516)
..+.+.+.+. .+|+|||+|||||++++|.|+++++++. .+||+. ++++++|++|+|+++
T Consensus 190 ~~la~~l~~~----~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------------~Vd~d~~d~~~~~~~la~~~gI~~v 252 (291)
T 3kp9_A 190 VGLAAHLRQI----GGTMYGAYWCPHCQDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSY 252 (291)
T ss_dssp HHHHHHHHHT----TCEEEECTTCHHHHHHHHHHGGGGGGSC-------------EEESCSSCSSSCCCHHHHTTTCCST
T ss_pred HHHHHHhCCC----CEEEEECCCCHHHHHHHHHHHHHHHHcC-------------EEEEeecCchhhHHHHHHHcCCccc
Confidence 4455556553 2799999999999999999999986542 355541 347899999999999
Q ss_pred CeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHH
Q 010178 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (516)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~ 171 (516)
||+++ +|+ .+.|.++.++|.+|++
T Consensus 253 PT~~i--~G~----------------~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 253 PTWII--NGR----------------TYTGVRSLEALAVASG 276 (291)
T ss_dssp TEEEE--TTE----------------EEESCCCHHHHHHHTC
T ss_pred CeEEE--CCE----------------EecCCCCHHHHHHHHC
Confidence 99655 441 3789999999999884
No 157
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.18 E-value=5.3e-11 Score=109.86 Aligned_cols=108 Identities=10% Similarity=0.182 Sum_probs=76.1
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC-------
Q 010178 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF------- 124 (516)
Q Consensus 52 ~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~------- 124 (516)
+++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+.+....+.+.|+.|+++.+ +.+..++|
T Consensus 48 ~g~~~~--l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~~~~~~~ 124 (183)
T 3lwa_A 48 EGTQIN--LSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFVTDNGLD 124 (183)
T ss_dssp TTCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHHHHTTCC
T ss_pred CCcEec--HHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHHHHcCCC
Confidence 444443 34445689999999999999999999999999999753200012349999998531 34444443
Q ss_pred ------------------CCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 ------------------SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ------------------~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|.++|+++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 125 ~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 125 YPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRP-------------AAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp SCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCE-------------EEEECSCCCHHHHHHHHHHHHH
T ss_pred ccEEECCcchHHHHhccCCCCCCCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHh
Confidence 68999976665 45533 3456788899999999987753
No 158
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.18 E-value=4.5e-11 Score=105.51 Aligned_cols=76 Identities=17% Similarity=0.331 Sum_probs=61.5
Q ss_pred hcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc----------------------ccH
Q 010178 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------INT 118 (516)
Q Consensus 61 ~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d----------------------~~~ 118 (516)
.+.+++++||+|||+||++|+.+.|.++++++++.+. ..+.++.|+++.+ .+.
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-----~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 1o73_A 24 GSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-----KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVS 98 (144)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred HHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-----CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHH
Confidence 3335689999999999999999999999999999731 2488888887642 246
Q ss_pred HHHHhCCCCccCeEEEec--CCccc
Q 010178 119 NLCDKFSVGHYPMLLWGS--PSKFV 141 (516)
Q Consensus 119 ~l~~~~~I~~~PTl~~f~--~g~~~ 141 (516)
.++++|+|.++||++++. +|++.
T Consensus 99 ~~~~~~~v~~~Pt~~lid~~~G~i~ 123 (144)
T 1o73_A 99 ELGKTFGVESIPTLITINADTGAII 123 (144)
T ss_dssp HHHHHHTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHcCCCCCCEEEEEECCCCeEE
Confidence 799999999999999987 56543
No 159
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.17 E-value=6.8e-11 Score=106.10 Aligned_cols=88 Identities=6% Similarity=0.054 Sum_probs=67.5
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc------------------H---HHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN------------------T---NLCD 122 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~------------------~---~l~~ 122 (516)
+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++.+.. . .+.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~------~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ------GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYIS 107 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG------TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHH
Confidence 4589999999999999999999999999999742 38899998853221 1 2889
Q ss_pred hCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHH
Q 010178 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 123 ~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
.|+|.++||++++ ++|++ +..+.|..+.++.+.-+
T Consensus 108 ~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 108 LYNVTNLPSVFLVNRNNEL-------------SARGENIKDLDEAIKKL 143 (152)
T ss_dssp HHTCCSCSEEEEEETTTEE-------------EEETTTCSCHHHHHHHH
T ss_pred HcCcccCceEEEECCCCeE-------------EEecCCHHHHHHHHHHH
Confidence 9999999999998 45543 34556777766655433
No 160
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.17 E-value=8.5e-11 Score=106.39 Aligned_cols=93 Identities=17% Similarity=0.310 Sum_probs=72.8
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc----------------cc------
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------IN------ 117 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d----------------~~------ 117 (516)
+.+.+++++||+||++||++|+.+.|.++++++++. .+.|+.|+++.. ++
T Consensus 32 l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (165)
T 3ha9_A 32 LNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRK 103 (165)
T ss_dssp GGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHH
T ss_pred HHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEecccccccccccccccCCCCCCHHHHHH
Confidence 334456899999999999999999999999999985 388999987510 12
Q ss_pred ----------------HHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccC-CHHHHHHHHHHhcc
Q 010178 118 ----------------TNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ-TADGLLTWINKQTS 175 (516)
Q Consensus 118 ----------------~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~-~~e~L~~~i~~~l~ 175 (516)
..+++.|+|.++||++++ ++|++. . .|.. +.+.|.+.|++.++
T Consensus 104 ~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~-------------~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 104 FIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVL-------------Y--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEE-------------E--EEESCCHHHHHHHHHHC--
T ss_pred HHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEE-------------E--eCCCCCHHHHHHHHHHHhc
Confidence 378999999999999998 455332 2 6777 89999999987653
No 161
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.17 E-value=5.8e-11 Score=105.86 Aligned_cols=93 Identities=16% Similarity=0.333 Sum_probs=70.7
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc---------------------ccHHHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---------------------INTNLCD 122 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d---------------------~~~~l~~ 122 (516)
+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+ .+..+++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG------KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGK 100 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT------SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHH
Confidence 468999999999999999999999999999974 2488888887542 1244889
Q ss_pred hCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccC--CHHHHHHHHHHhcc
Q 010178 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 175 (516)
Q Consensus 123 ~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~--~~e~L~~~i~~~l~ 175 (516)
.|+|.++|+++++ ++|++ +..+.|.. +.+++.++|++...
T Consensus 101 ~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 101 LYGTTGVPETFVIDRHGVI-------------LKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp HHTCCSBCEEEEECTTSBE-------------EEEEESCCCTTSHHHHHHHHTC--
T ss_pred HhCCCCCCeEEEECCCCcE-------------EEEEcCCCccccHHHHHHHHHHHH
Confidence 9999999977766 45543 33455654 66789998876543
No 162
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.17 E-value=9.6e-11 Score=120.14 Aligned_cols=112 Identities=12% Similarity=0.177 Sum_probs=92.3
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.+.+++.+++...+... .++++|.||++||++|+.+.|.|+++|+.++ +.+.|+.|||+..++..+|+.|
T Consensus 116 ~p~v~~~~~~~~~~~~~~~-~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~-------~~i~f~~vd~~~~~~~~~~~~f 187 (361)
T 3uem_A 116 LPLVIEFTEQTAPKIFGGE-IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFIFIDSDHTDNQRILEFF 187 (361)
T ss_dssp SCSEEECSTTTHHHHHSCS-CCEEEEEECCSSSSSHHHHHHHHHHHHGGGT-------TTCEEEEECTTSGGGHHHHHHT
T ss_pred CCcceecCcccHHHHhcCC-CCcEEEEEEeCCchhHHHHHHHHHHHHHHcc-------CceEEEEecCChHHHHHHHHHc
Confidence 4457889999999877654 3567999999999999999999999999997 4599999999644689999999
Q ss_pred CCCc--cCeEEEecCCcccCCCCCCCccccchhhc---cccCCHHHHHHHHHHhcccC
Q 010178 125 SVGH--YPMLLWGSPSKFVAGSWEPNQEKKEIRAL---EDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 125 ~I~~--~PTl~~f~~g~~~~~~~~~~~~~~~v~~~---~G~~~~e~L~~~i~~~l~~~ 177 (516)
||.+ +||+++|..+.. ...| .|.++.+.|.+|+.+.+...
T Consensus 188 gi~~~~~P~~~~~~~~~~-------------~~ky~~~~~~~~~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 188 GLKKEECPAVRLITLEEE-------------MTKYKPESEELTAERITEFCHRFLEGK 232 (361)
T ss_dssp TCCTTTCSEEEEEECC---------------CCEECCSSCCCCHHHHHHHHHHHHTTC
T ss_pred CCCccCCccEEEEEcCCc-------------ccccCCCccccCHHHHHHHHHHHhcCC
Confidence 9998 999999876421 1223 37899999999999988643
No 163
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.15 E-value=4.1e-11 Score=108.82 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=68.3
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc---------------------ccccHHHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCD 122 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~---------------------~d~~~~l~~ 122 (516)
+++++||+||++||++|+.+.|.+++++++ + +.++.|+++ .+.+..+++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~--------v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 119 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--G--------IRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGL 119 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T--------CCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--C--------CEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHH
Confidence 468899999999999999999999999875 1 556666642 245678999
Q ss_pred hCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 123 ~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+|+|.++|+++++ ++|++ +..+.|..+.+.+.++|++.+.
T Consensus 120 ~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 120 DLGVYGAPETFLIDGNGII-------------RYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHTCCSSSEEEEECTTSBE-------------EEEEESCCCHHHHHHTTHHHHH
T ss_pred HcCccccCEEEEECCCCeE-------------EEEEeCCCCHHHHHHHHHHHHH
Confidence 9999999965554 55533 3456788889999888877654
No 164
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.15 E-value=4.2e-11 Score=106.93 Aligned_cols=90 Identities=16% Similarity=0.232 Sum_probs=69.8
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------------------cccHHHHH
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------KINTNLCD 122 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~---------------------d~~~~l~~ 122 (516)
.+++++|+||++||++|+.+.|.+++++++ +.+.++.|+++. +.+..+++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD---------KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASI 111 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC---------TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHH
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc---------CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHH
Confidence 358899999999999999999999988764 136777777532 34567899
Q ss_pred hCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 123 ~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
.|+|.++||++++ ++|++ +..+.|..+.+.|.++|++.+.
T Consensus 112 ~~~v~~~P~~~~id~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 112 EWGVYGVPETFVVGREGTI-------------VYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp HTTCCSSCEEEEECTTSBE-------------EEEEESCCCHHHHHHTHHHHHH
T ss_pred hcCcCccCeEEEEcCCCCE-------------EEEEeCCCCHHHHHHHHHHHHH
Confidence 9999999976665 55533 3456788899999998887664
No 165
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.14 E-value=1.2e-10 Score=107.89 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=76.9
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------------
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------- 114 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------------------- 114 (516)
+.+.+++++||+||++||++|+.+.|.++++++++.+ . +.|+.|+++.
T Consensus 28 l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~ 100 (188)
T 2cvb_A 28 LSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRG------K-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPY 100 (188)
T ss_dssp GGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT------T-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCE
T ss_pred HHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc------C-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceE
Confidence 3444578999999999999999999999999999863 3 8889998742
Q ss_pred --cccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 115 --KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 115 --d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+.+..+++.|+|.++||++++ ++|++...+.. .....+.|..+.++|.+.|++.+..
T Consensus 101 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~-----~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 101 LLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRV-----NDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp EECSSSHHHHHTTCCEESEEEEECTTCBEEEEECS-----SSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred EECCcchHHHHcCCCCCCeEEEECCCCcEEEEEec-----CCccccccccCHHHHHHHHHHHHcC
Confidence 345678999999999999888 55654321000 0000133555788999999887753
No 166
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.12 E-value=1.5e-10 Score=118.63 Aligned_cols=97 Identities=10% Similarity=0.092 Sum_probs=77.9
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------------
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------- 114 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------------------- 114 (516)
+.+.+++++||+||++||++|+.+.|.++++++++.+. .+.|+.|+++.
T Consensus 77 Lsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~------~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~ 150 (352)
T 2hyx_A 77 LKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS------GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIAL 150 (352)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG------TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEE
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC------CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEe
Confidence 33445689999999999999999999999999999742 48899998741
Q ss_pred cccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 115 KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 115 d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+.+..+++.|+|.++||++++ ++|+ .+..+.|..+.++|.++|++.+.
T Consensus 151 D~~~~l~~~ygV~~~Pt~~lID~~G~-------------Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 151 DNNYATWTNYRNRYWPAEYLIDATGT-------------VRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp CTTSHHHHHTTCCEESEEEEECTTSB-------------EEEEEESBCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHcCCCccCEEEEEeCCCe-------------EEEEEcCCCCHHHHHHHHHHHHh
Confidence 234678999999999998887 4553 33456788899999999988764
No 167
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.12 E-value=9.7e-11 Score=103.51 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=59.7
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-----------------------
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------------------- 116 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~----------------------- 116 (516)
+.+.+++++||+|||+||++|+.+.|.++++++++.+. .+.|+.|+.+.+.
T Consensus 27 l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 100 (143)
T 4fo5_A 27 FHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD------KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLG 100 (143)
T ss_dssp SCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT------TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTG
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC------CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccc
Confidence 34445799999999999999999999999999998742 4888888875321
Q ss_pred -cHHHHHhCCCCccCeEEEec-CCcc
Q 010178 117 -NTNLCDKFSVGHYPMLLWGS-PSKF 140 (516)
Q Consensus 117 -~~~l~~~~~I~~~PTl~~f~-~g~~ 140 (516)
+..+++.|+|.++||++++. +|++
T Consensus 101 ~~~~~~~~~~v~~~P~~~lid~~G~i 126 (143)
T 4fo5_A 101 KESELYKKYDLRKGFKNFLINDEGVI 126 (143)
T ss_dssp GGSHHHHHTTGGGCCCEEEECTTSBE
T ss_pred cchHHHHHcCCCCCCcEEEECCCCEE
Confidence 13678999999999888875 5543
No 168
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.10 E-value=2.7e-10 Score=105.27 Aligned_cols=107 Identities=14% Similarity=0.263 Sum_probs=77.0
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc---ccHHHHHhCC
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---INTNLCDKFS 125 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d---~~~~l~~~~~ 125 (516)
..++++.+. +.+.+++++||+||++||++|+.+.|.++++++++.+ ..+.++.|+++.+ ....++++++
T Consensus 46 ~~~~G~~~~--l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d~~~~~~~~~~~~~~~ 117 (186)
T 1jfu_A 46 EDADGKPKK--LSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSG------PNFEVVAINIDTRDPEKPKTFLKEAN 117 (186)
T ss_dssp ECTTSCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB------TTEEEEEEECCCSCTTHHHHHHHHTT
T ss_pred EcCCCCEee--HHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc------CCcEEEEEECCCCCHHHHHHHHHHcC
Confidence 344444433 3333568999999999999999999999999999974 3488889988643 1256677777
Q ss_pred CC-----------------------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCC--HHHHHHHHHHhccc
Q 010178 126 VG-----------------------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT--ADGLLTWINKQTSR 176 (516)
Q Consensus 126 I~-----------------------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~--~e~L~~~i~~~l~~ 176 (516)
+. ++|+++++ ++|++ +..+.|..+ .+++.++|++.+..
T Consensus 118 ~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i-------------~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 118 LTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCE-------------IATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp CCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBE-------------EEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred CCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCE-------------EEEEecCCccCHHHHHHHHHHHhcc
Confidence 74 89998887 45533 344556554 78899999887753
No 169
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.10 E-value=1.3e-10 Score=108.33 Aligned_cols=100 Identities=11% Similarity=0.117 Sum_probs=74.5
Q ss_pred CC-eEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------------------------cc
Q 010178 65 AT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------KI 116 (516)
Q Consensus 65 ~k-~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~---------------------------d~ 116 (516)
++ ++||+||++||++|+.+.|.++++++++.+. .+.++.|+++. +.
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 118 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK------GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDE 118 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG------TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC------CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECC
Confidence 45 5999999999999999999999999999742 38888898742 34
Q ss_pred cHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhh-ccccCCHHHHHHHHHHhcc
Q 010178 117 NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRA-LEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~-~~G~~~~e~L~~~i~~~l~ 175 (516)
+..+++.|+|.++||++++ ++|++...... ..... +.|..+.++|.+.|++.+.
T Consensus 119 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~-----~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 119 TQEVAKAYDAACTPDFYIFDRDLKCVYRGQL-----DDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp SCHHHHHHTCCEESEEEEEETTCBEEEEECS-----SSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCCCCCeEEEEcCCCeEEEcccc-----CcccccccCccCHHHHHHHHHHHHc
Confidence 5678999999999999888 56654321000 00000 4567788999999988775
No 170
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.09 E-value=1.3e-10 Score=107.08 Aligned_cols=92 Identities=15% Similarity=0.250 Sum_probs=70.8
Q ss_pred hcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc---------------------ccccHH
Q 010178 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTN 119 (516)
Q Consensus 61 ~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~---------------------~d~~~~ 119 (516)
.+.+++++||+||++||++|+.+.|.+++++++ + +.|+.|+++ .+.+..
T Consensus 54 ~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~--------v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (176)
T 3kh7_A 54 ADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G--------VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGT 123 (176)
T ss_dssp GGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T--------CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCH
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C--------CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcch
Confidence 334468999999999999999999999999875 1 566666642 134567
Q ss_pred HHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 120 LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 120 l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+++.|+|.++|+++++ ++|++ +..+.|..+.+.+.+.|.+.+.
T Consensus 124 ~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 124 LGLDLGVYGAPETYLIDKQGII-------------RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHHTCCSSCEEEEECTTCBE-------------EEEEESCCCHHHHHHHTHHHHH
T ss_pred HHHHcCCCCCCeEEEECCCCeE-------------EEEEcCCCCHHHHHHHHHHHHH
Confidence 8999999999987776 45533 3456788899999888877664
No 171
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.09 E-value=1.6e-10 Score=97.86 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=64.1
Q ss_pred eEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCCC
Q 010178 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWE 146 (516)
Q Consensus 67 ~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~ 146 (516)
..|+.||++||++|+...|.++++++++. +.+..||++ +++++..+|+++ +||+++|.+|+..
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---------i~~~~vDId--~d~~l~~~ygv~-VP~l~~~~dG~~v----- 92 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---------FELEVINID--GNEHLTRLYNDR-VPVLFAVNEDKEL----- 92 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---------CCCEEEETT--TCHHHHHHSTTS-CSEEEETTTTEEE-----
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---------CeEEEEECC--CCHHHHHHhCCC-CceEEEEECCEEE-----
Confidence 46899999999999999999999999863 678889974 578899999998 9999998776421
Q ss_pred CCccccchhhccccCCHHHHHHHH
Q 010178 147 PNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 147 ~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
..|..+.+.|.++|
T Consensus 93 ----------~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 93 ----------CHYFLDSDVIGAYL 106 (107)
T ss_dssp ----------ECSSCCCHHHHHHH
T ss_pred ----------EecCCCHHHHHHHh
Confidence 24667888888876
No 172
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.08 E-value=2.4e-10 Score=103.29 Aligned_cols=107 Identities=9% Similarity=0.139 Sum_probs=79.0
Q ss_pred cccHHHHHhcC--CCCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCC
Q 010178 53 ATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (516)
Q Consensus 53 ~~~f~~~l~~~--~~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~ 127 (516)
..+|++.+... .+|++||+||++||..|+.+.... .++++.++ ..+.++.+|.+.+++..+.++|+|.
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~-------~~fv~v~~d~~~~~~~~l~~~y~v~ 100 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR-------EHFIFWQVYHDSEEGQRYIQFYKLG 100 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHH-------HTEEEEEEESSSHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHH-------cCeEEEEEecCCHhHHHHHHHcCCC
Confidence 45777766432 369999999999999999997544 44555543 2378889998766678899999999
Q ss_pred ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
++||++|+.+.. ++.+..+.| .+++++++.|++.+...-
T Consensus 101 ~~P~~~fld~~~-----------G~~l~~~~g-~~~~~fl~~L~~~l~~~~ 139 (153)
T 2dlx_A 101 DFPYVSILDPRT-----------GQKLVEWHQ-LDVSSFLDQVTGFLGEHG 139 (153)
T ss_dssp SSSEEEEECTTT-----------CCCCEEESS-CCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEeCCC-----------CcEeeecCC-CCHHHHHHHHHHHHHhcC
Confidence 999999986420 122334545 899999999988876443
No 173
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.64 E-value=1.6e-11 Score=108.10 Aligned_cols=74 Identities=18% Similarity=0.355 Sum_probs=58.3
Q ss_pred CCC-eEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-----------------------cHH
Q 010178 64 PAT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTN 119 (516)
Q Consensus 64 ~~k-~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~-----------------------~~~ 119 (516)
+++ ++||.|||+||++|+.+.|.++++++++++.+ ..+.++.|+++.+. +..
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~----~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDS----APFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASN 99 (143)
Confidence 356 89999999999999999999999999885321 34778888775321 147
Q ss_pred HHHhCCCCccCeEEEec-CCccc
Q 010178 120 LCDKFSVGHYPMLLWGS-PSKFV 141 (516)
Q Consensus 120 l~~~~~I~~~PTl~~f~-~g~~~ 141 (516)
+++.|+|.++||++++. +|++.
T Consensus 100 ~~~~~~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 100 VTAKYGITGIPALVIVKKDGTLI 122 (143)
Confidence 89999999999999986 56543
No 174
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.04 E-value=3.4e-10 Score=101.94 Aligned_cols=97 Identities=9% Similarity=0.115 Sum_probs=72.6
Q ss_pred CCCeEEEEEecCCChh-hhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--------------------------c
Q 010178 64 PATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~-C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (516)
+++++||+||++||++ |+.+.|.++++++++.+.. ....+.++.|+++.+ .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~ 99 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSIT--TLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREE 99 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSS--SSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhcc--CCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHH
Confidence 4689999999999998 9999999999999986310 002488888887531 1
Q ss_pred cHHHHHhCCCCccC---------------eEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 117 NTNLCDKFSVGHYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 117 ~~~l~~~~~I~~~P---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
...+++.|+|.+.| +++++ ++|++ +..+.|..+.++|.+.|.+.+.
T Consensus 100 ~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 100 VDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF-------------LDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCE-------------EEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeE-------------EEEeCCCCCHHHHHHHHHHHHH
Confidence 23588899999999 55555 45543 3456778889999999988764
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.03 E-value=5.9e-10 Score=106.43 Aligned_cols=116 Identities=12% Similarity=0.131 Sum_probs=80.4
Q ss_pred ceecCcccHHHHHhcCCCCe-EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010178 48 AVELNATNFDAVLRDTPATY-AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~-vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (516)
+..++++.+. +.+.++++ +||+||++||++|+.+.|.++++++++.+. .+.|+.|+++.
T Consensus 43 l~~~~G~~v~--l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~d~~~~~ 114 (218)
T 3u5r_E 43 LPDAGGNLFT--LAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ------GLAVVAINSNDAQAFPEETLERV 114 (218)
T ss_dssp EECTTCCEEC--GGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT------TEEEEEEECSCTTTCGGGSHHHH
T ss_pred eECCCCCEEe--HHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC------CcEEEEEECCcccccccCCHHHH
Confidence 3444444443 33444574 999999999999999999999999999753 38899998841
Q ss_pred ---------------cccHHHHHhCCCCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 115 ---------------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 115 ---------------d~~~~l~~~~~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|.+..+++.|+|.++|+++++ ++|++...+.... . .....+..+.++|.+.|++.+.
T Consensus 115 ~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~---~-~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 115 GAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDD---A-RPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSS---C-CTTSCCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccc---c-ccccccccCHHHHHHHHHHHHc
Confidence 345689999999999999998 5665432100000 0 0012345677899999988774
No 176
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.01 E-value=2.6e-10 Score=92.96 Aligned_cols=75 Identities=12% Similarity=0.126 Sum_probs=59.3
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCCCCC
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPN 148 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~ 148 (516)
++.||++||++|+.+.|.+++++.++ +..||+ ++++++.++||++ +||+++ .+|+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------------~~~vdi--d~~~~l~~~~g~~-vPtl~~-~~G~~-------- 58 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------------FFSVFI--DDDAALESAYGLR-VPVLRD-PMGRE-------- 58 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------------EEEEEC--TTCHHHHHHHTTT-CSEEEC-TTCCE--------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------------eEEEEC--CCCHHHHHHhCCC-cCeEEE-ECCEE--------
Confidence 78999999999999999998765431 467887 4688999999999 999987 65532
Q ss_pred ccccchhhccccCCHHHHHHHHHHhcc
Q 010178 149 QEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 149 ~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+ .|..+.+.|.++|.+.+.
T Consensus 59 -----v---~g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 59 -----L---DWPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp -----E---ESCCCHHHHHHHHHTCC-
T ss_pred -----E---eCCCCHHHHHHHHHHHHH
Confidence 1 267889999999976543
No 177
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.01 E-value=4.6e-10 Score=102.49 Aligned_cols=94 Identities=10% Similarity=0.080 Sum_probs=67.3
Q ss_pred cCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------cccHHHH-----------
Q 010178 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINTNLC----------- 121 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~---------d~~~~l~----------- 121 (516)
+.+++++||+|||+||++|+ +.|.++++++++.+. .+.++.|+++. +...+..
T Consensus 29 ~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~ 101 (171)
T 3cmi_A 29 QLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE------GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIM 101 (171)
T ss_dssp GGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG------TEEEEEEEECSCC------------------CCCSCBB
T ss_pred HcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC------CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEE
Confidence 33568999999999999999 999999999999742 38888887631 1111122
Q ss_pred -------------------HhCCCCccC------eEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 122 -------------------DKFSVGHYP------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 122 -------------------~~~~I~~~P------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
..|+|.++| +++++ ++|++ +..+.|..+.+.|.+.|++.+.
T Consensus 102 ~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 102 KKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV-------------YERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE-------------EEEECTTSCGGGGHHHHHHHHT
T ss_pred eeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE-------------EEEeCCCCCHHHHHHHHHHHHH
Confidence 247899999 66665 55533 3456777888889988887764
No 178
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.98 E-value=9.1e-10 Score=99.91 Aligned_cols=99 Identities=10% Similarity=0.124 Sum_probs=73.8
Q ss_pred cCCCCeEEEEEecCCChh-hhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc-------------------------
Q 010178 62 DTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------- 115 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~-C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d------------------------- 115 (516)
+.+++++||+||++||++ |+.+.|.++++++++.+.. ....+.++.|+++.+
T Consensus 23 ~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~ 100 (171)
T 2rli_A 23 DFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEP--GLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGST 100 (171)
T ss_dssp TTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHST--TSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCH
T ss_pred HhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhcc--CCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCH
Confidence 345689999999999998 9999999999999985210 002488888887521
Q ss_pred -ccHHHHHhCCCCccC---------------eEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 116 -INTNLCDKFSVGHYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 116 -~~~~l~~~~~I~~~P---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
....+++.|+|.++| +++++ ++|++ +..+.|..+.++|.+.|.+.+.
T Consensus 101 ~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 101 KQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF-------------TDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCE-------------EEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeE-------------EEEECCCCCHHHHHHHHHHHHH
Confidence 113688899999988 66665 55543 3456788899999999988764
No 179
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.98 E-value=6.8e-10 Score=103.22 Aligned_cols=107 Identities=3% Similarity=-0.026 Sum_probs=72.6
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------cccHHHH
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------KINTNLC 121 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------d~~~~l~ 121 (516)
+..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++++. .+.++.|+++. +....+.
T Consensus 31 l~d~~G~~~~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~~~vi~is~d~~~~~e~~~~~~~~ 102 (187)
T 3dwv_A 31 VLDADHKPYN--LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ------GFTVLAFPSNQFGGQEPGNEEEIK 102 (187)
T ss_dssp CBBTTSCBCC--GGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG------TCEEEEEEBCCCSSCSSSBTTHHH
T ss_pred EEcCCCCEee--HHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC------CeEEEEEECcccCCCCCCCHHHHH
Confidence 4445555443 34445789999999999999999999999999999753 37888887641 1111111
Q ss_pred ------------------------------------HhCCCCccC---eEEEe-cCCcccCCCCCCCccccchhhccccC
Q 010178 122 ------------------------------------DKFSVGHYP---MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ 161 (516)
Q Consensus 122 ------------------------------------~~~~I~~~P---Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~ 161 (516)
..+++.++| |++++ ++|+ .+..+.|..
T Consensus 103 ~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~-------------i~~~~~g~~ 169 (187)
T 3dwv_A 103 EFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGV-------------PVERFSPGA 169 (187)
T ss_dssp HSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSC-------------EEEEECTTC
T ss_pred HHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCC-------------EEEEECCCC
Confidence 112344566 76665 4443 334567888
Q ss_pred CHHHHHHHHHHhcc
Q 010178 162 TADGLLTWINKQTS 175 (516)
Q Consensus 162 ~~e~L~~~i~~~l~ 175 (516)
+.+.|.+.|.+.+.
T Consensus 170 ~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 170 SVKDIEEKLIPLLG 183 (187)
T ss_dssp CHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988875
No 180
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.97 E-value=7.8e-10 Score=100.15 Aligned_cols=95 Identities=7% Similarity=0.038 Sum_probs=68.2
Q ss_pred cCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------cc---cHHHHH-hC-------
Q 010178 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------KI---NTNLCD-KF------- 124 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------d~---~~~l~~-~~------- 124 (516)
+.+++++||+||++||++|+.+.|.++++++++.+. .+.++.|+++. +. ..+.++ ++
T Consensus 29 ~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (170)
T 2p5q_A 29 IFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ------GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIF 102 (170)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBB
T ss_pred HhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC------CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeE
Confidence 335689999999999999999999999999999742 38899998742 11 122333 43
Q ss_pred ----------------------CC--CccC---eEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 ----------------------SV--GHYP---MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ----------------------~I--~~~P---Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+| .++| |++++ ++|+ .+..+.|..+.++|.+.|++.+.
T Consensus 103 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~-------------i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 103 DKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQ-------------VVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSC-------------EEEEECTTSCGGGGHHHHHHHTT
T ss_pred eeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCC-------------EEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5667 66655 4443 33456778888899999888764
No 181
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.96 E-value=9.6e-10 Score=102.38 Aligned_cols=106 Identities=5% Similarity=-0.003 Sum_probs=73.9
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------cccHH
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINTN 119 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~---------d~~~~ 119 (516)
..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++.+. .+.|+.|+++. ++..+
T Consensus 34 ~~~~G~~~~--l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~~ 105 (190)
T 2vup_A 34 LDADHKPYN--LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ------GFTVLAFPCNQFGGQEPGNEEEIKE 105 (190)
T ss_dssp BBTTSSBCC--GGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TCEEEEEECCCSTTCCCSCHHHHHH
T ss_pred EcCCCCEEE--HHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC------CeEEEEEEcCccCCCCCCCHHHHHH
Confidence 334444433 33345689999999999999999999999999999742 38888888751 01112
Q ss_pred HH-H-----------------------------hCCCCccC------eEEEe-cCCcccCCCCCCCccccchhhccccCC
Q 010178 120 LC-D-----------------------------KFSVGHYP------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT 162 (516)
Q Consensus 120 l~-~-----------------------------~~~I~~~P------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~ 162 (516)
.+ + .|+|.++| +++++ ++|++ +..+.|..+
T Consensus 106 ~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i-------------~~~~~g~~~ 172 (190)
T 2vup_A 106 FVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP-------------VERFSPGAS 172 (190)
T ss_dssp HHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE-------------EEEECTTCC
T ss_pred HHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE-------------EEEECCCCC
Confidence 22 2 25788888 66555 45533 345678888
Q ss_pred HHHHHHHHHHhcc
Q 010178 163 ADGLLTWINKQTS 175 (516)
Q Consensus 163 ~e~L~~~i~~~l~ 175 (516)
.+.|.+.|++.+.
T Consensus 173 ~~~l~~~i~~ll~ 185 (190)
T 2vup_A 173 VKDIEKKLIPLLE 185 (190)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 182
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.93 E-value=1.8e-09 Score=97.67 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=39.8
Q ss_pred cCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+.+++++||+||++||++|+.+.|.++++++++.+. .+.++.|+++
T Consensus 28 ~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~d 73 (169)
T 2v1m_A 28 KYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK------GLRILAFPCN 73 (169)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC------CeEEEEEECC
Confidence 335689999999999999999999999999999742 3889999874
No 183
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.93 E-value=8.9e-10 Score=101.77 Aligned_cols=57 Identities=12% Similarity=0.133 Sum_probs=44.2
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++.+. .+.++.|+++
T Consensus 35 ~~~~G~~~~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~v~vv~vs~d 91 (181)
T 2p31_A 35 VNIRGKLVS--LEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH------HFNVLAFPCN 91 (181)
T ss_dssp EBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred ecCCCCEec--HHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC------CEEEEEEECc
Confidence 334444333 33345689999999999999999999999999999742 3889999875
No 184
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.92 E-value=9.4e-10 Score=99.82 Aligned_cols=98 Identities=10% Similarity=0.113 Sum_probs=71.2
Q ss_pred HhcCCCCeEEEEEecCCChh-hhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-c--------------------
Q 010178 60 LRDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-N-------------------- 117 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~-C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~-~-------------------- 117 (516)
+.+.+++++||+||++||++ |+.+.|.++++++++.+.+ .+.+.|+.|+++.+. .
T Consensus 30 l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~---~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d 106 (172)
T 2k6v_A 30 LSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKA---QERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSG 106 (172)
T ss_dssp GGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHH---HTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECC
T ss_pred HHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhc---cCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeC
Confidence 34445789999999999997 9999999999999886310 014889999875321 1
Q ss_pred -----HHHHHhCC---------------CCccCeEEEecCCcccCCCCCCCccccchhhccccC--CHHHHHHHHHHh
Q 010178 118 -----TNLCDKFS---------------VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQ 173 (516)
Q Consensus 118 -----~~l~~~~~---------------I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~--~~e~L~~~i~~~ 173 (516)
..+++.|+ |.++||++++.+|++ +..+.|.. +.++|.+.|++.
T Consensus 107 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i-------------~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 107 SPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRL-------------VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEE-------------EEEECHHHHTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEE-------------EEEECCCCCCCHHHHHHHHHHh
Confidence 35666666 467899998875543 34456666 889999888764
No 185
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.91 E-value=3.4e-09 Score=95.75 Aligned_cols=85 Identities=9% Similarity=0.102 Sum_probs=64.1
Q ss_pred ceecCcccHHHHHhcCCCCe-EEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------
Q 010178 48 AVELNATNFDAVLRDTPATY-AVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~-vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (516)
+..++++.+. +.+.++++ +||.|| ++||++|+.+.|.++++++++.+. .+.++.|+++.
T Consensus 13 l~~~~G~~~~--l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~ 84 (161)
T 3drn_A 13 GIADNGEKIS--LSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY------DVVVIGVSSDDINSHKRFKEKY 84 (161)
T ss_dssp EEETTSCEEE--GGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT------CEEEEEEESCCHHHHHHHHHHT
T ss_pred eecCCCCEEE--HHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEeCCCHHHHHHHHHHh
Confidence 3344444433 33344576 999999 999999999999999999999753 38888888752
Q ss_pred --------cccHHHHHhCCCCc----cCeEEEe-cCCcc
Q 010178 115 --------KINTNLCDKFSVGH----YPMLLWG-SPSKF 140 (516)
Q Consensus 115 --------d~~~~l~~~~~I~~----~PTl~~f-~~g~~ 140 (516)
+.+..+++.|+|.+ +|+++++ ++|++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i 123 (161)
T 3drn_A 85 KLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGII 123 (161)
T ss_dssp TCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBE
T ss_pred CCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEE
Confidence 24568899999999 9988887 45644
No 186
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.91 E-value=4.1e-09 Score=102.41 Aligned_cols=99 Identities=9% Similarity=0.104 Sum_probs=77.7
Q ss_pred cccHHHHHhcCCCCeEEEEEecCC--ChhhhhhhHHHHHHHHHhCCCCCCCCCe--EEEEEEeccccccHHHHHhCCCCc
Q 010178 53 ATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGI--ILMTRVDCALKINTNLCDKFSVGH 128 (516)
Q Consensus 53 ~~~f~~~l~~~~~k~vlV~FyA~W--C~~C~~~~P~~~~la~~~~~~~~~~~~~--v~~~~VDc~~d~~~~l~~~~~I~~ 128 (516)
.+.+++.+... +++++|.||++| |++|+.+.|.++++|+..... .++ |.|+.+|+ +++++++++|||++
T Consensus 14 ~~ql~~~~~~~-~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~----~~~~~v~~~~vd~--d~~~~~~~~~gv~~ 86 (243)
T 2hls_A 14 RRELRETLAEM-VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTR----NGGKLLKLNVYYR--ESDSDKFSEFKVER 86 (243)
T ss_dssp HHHHHHHHTTC-CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEE----TTEESEEEEEEET--TTTHHHHHHTTCCS
T ss_pred HHHHHHHHHhC-CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCC----CCCceeEEEEecC--CcCHHHHHhcCCCc
Confidence 35566666554 478999999999 999999999999999885210 133 99999998 46889999999999
Q ss_pred cCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 129 YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 129 ~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+||+++| +| . ..|.|.++.+.+.+|+...+
T Consensus 87 ~Pt~~i~-~g-~--------------~~~~G~~~~~~l~~fv~~~l 116 (243)
T 2hls_A 87 VPTVAFL-GG-E--------------VRWTGIPAGEEIRALVEVIM 116 (243)
T ss_dssp SSEEEET-TT-T--------------EEEESCCCTTHHHHHHHHHH
T ss_pred CCEEEEE-CC-c--------------eeEcCCCcHHHHHHHHHHHH
Confidence 9999998 43 1 34677777788888887755
No 187
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=1.5e-10 Score=104.17 Aligned_cols=92 Identities=14% Similarity=0.256 Sum_probs=61.3
Q ss_pred cCCCCeEEEEEecCCChhhhhhhHHHHH-HHHHhCCCCCCCCCeEEEEEEeccccc--------------------cHHH
Q 010178 62 DTPATYAVVEFFANWCPACRNYKPQYEK-VARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNL 120 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~~P~~~~-la~~~~~~~~~~~~~v~~~~VDc~~d~--------------------~~~l 120 (516)
+.+++++||.||++||++|+.+.|.+++ +++.+... ..+.++.|+++.+. +..+
T Consensus 30 ~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (159)
T 2ls5_A 30 SLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDN-----ADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADI 104 (159)
Confidence 3346889999999999999999999998 88887511 34788888875321 1123
Q ss_pred HHhCC--CCccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 121 CDKFS--VGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 121 ~~~~~--I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
.+.|+ +.++||++++ ++|++. ..+.| .+.+++.++|++
T Consensus 105 ~~~~~~~~~~~P~~~lid~~G~i~-------------~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 105 FAKYALRDAGITRNVLIDREGKIV-------------KLTRL-YNEEEFASLVQQ 145 (159)
Confidence 33444 5679998887 555433 23334 455566666554
No 188
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.88 E-value=3.3e-09 Score=97.75 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=45.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++.+. .+.++.|+++
T Consensus 23 l~d~~G~~v~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~~~vi~is~d 80 (180)
T 3kij_A 23 VKDAKGRTVS--LEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS------HFSVLAFPCN 80 (180)
T ss_dssp EEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT------SEEEEEEECC
T ss_pred EecCCCCEec--HHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC------CeEEEEEECC
Confidence 3444554443 34445789999999999999999999999999999753 3888888864
No 189
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.86 E-value=3.1e-09 Score=100.82 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=39.9
Q ss_pred cCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 62 ~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+.+++++||+|||+|||+|+.++|.++++++++.+. .+.|+.|+++
T Consensus 44 ~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~------g~~vv~v~~d 89 (208)
T 2f8a_A 44 SLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR------GLVVLGFPCN 89 (208)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC------CeEEEEEECC
Confidence 335689999999999999999999999999999742 3889999884
No 190
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.85 E-value=3.1e-09 Score=95.45 Aligned_cols=72 Identities=8% Similarity=0.066 Sum_probs=57.1
Q ss_pred CCCC-eEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------cc--cHH
Q 010178 63 TPAT-YAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KI--NTN 119 (516)
Q Consensus 63 ~~~k-~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------d~--~~~ 119 (516)
.+++ ++||.|| ++||++|+.+.|.+.++++++.+ ..+.++.|+++. +. +..
T Consensus 33 ~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 106 (160)
T 1xvw_A 33 YRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN------DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGA 106 (160)
T ss_dssp GTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS------SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTH
T ss_pred hcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChH
Confidence 3456 8999998 99999999999999999999864 248888888753 21 677
Q ss_pred HHHhCCCC----ccC--eEEEe-cCCcc
Q 010178 120 LCDKFSVG----HYP--MLLWG-SPSKF 140 (516)
Q Consensus 120 l~~~~~I~----~~P--Tl~~f-~~g~~ 140 (516)
+.+.|+|. ++| +++++ ++|++
T Consensus 107 ~~~~~~v~~~~~~~p~~~~~lid~~G~i 134 (160)
T 1xvw_A 107 VSQAYGVFNEQAGIANRGTFVVDRSGII 134 (160)
T ss_dssp HHHHTTCEETTTTEECSEEEEECTTSBE
T ss_pred HHHHcCCccccCCCeeeeEEEECCCCeE
Confidence 99999999 999 55554 56654
No 191
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.85 E-value=2.9e-09 Score=98.34 Aligned_cols=57 Identities=11% Similarity=0.124 Sum_probs=44.1
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
..++++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+. .+.|+.|+++
T Consensus 33 ~~~~G~~~~--l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~vs~d 89 (183)
T 2obi_A 33 KDIDGHMVN--LDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC------GLRILAFPCN 89 (183)
T ss_dssp EBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred EcCCCCEee--HHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC------CeEEEEEECC
Confidence 334444433 33335689999999999999999999999999999742 3888899874
No 192
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.85 E-value=1.1e-09 Score=93.33 Aligned_cols=87 Identities=16% Similarity=0.206 Sum_probs=56.9
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCCCcc
Q 010178 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGHY 129 (516)
Q Consensus 55 ~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I~~~ 129 (516)
.+++.+.. +.++| ||++||++|+.+.|.+++++.. +.++.||. +.+ ..++++|+|.++
T Consensus 12 ~~~~~~~~---~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----------~~~v~v~~--~~~~~~~~~~l~~~~~v~~~ 74 (116)
T 2e7p_A 12 KAKELASS---APVVV-FSKTYCGYCNRVKQLLTQVGAS-----------YKVVELDE--LSDGSQLQSALAHWTGRGTV 74 (116)
T ss_dssp HHHHHHTS---SSEEE-EECTTCHHHHHHHHHHHHHTCC-----------CEEEEGGG--STTHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHcC---CCEEE-EECCCChhHHHHHHHHHHcCCC-----------eEEEEccC--CCChHHHHHHHHHHhCCCCc
Confidence 34444443 44555 9999999999999999887432 34555554 333 568999999999
Q ss_pred CeEEEecCCcccCCCCCCCccccchhhccccC---CHHHHHHHHHHh
Q 010178 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ---TADGLLTWINKQ 173 (516)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~---~~e~L~~~i~~~ 173 (516)
||+ |.+|+... .+.|.. +.+.|.++|.+.
T Consensus 75 Pt~--~~~g~~v~-------------~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 75 PNV--FIGGKQIG-------------GCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp CEE--EETTEEEE-------------CHHHHHHHHHTTCHHHHHHHT
T ss_pred CEE--EECCEEEC-------------ChHHHHHHHhCChHHHHHHHc
Confidence 999 33554332 222222 556677777653
No 193
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.83 E-value=4.4e-09 Score=97.47 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=72.1
Q ss_pred CCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------cccH
Q 010178 63 TPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINT 118 (516)
Q Consensus 63 ~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~~ 118 (516)
.+++++||.|| ++||++|+.+.|.++++++++.+. .+.++.|+++. +.+.
T Consensus 29 ~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 102 (187)
T 1we0_A 29 LKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL------GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQ 102 (187)
T ss_dssp TSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTC
T ss_pred HCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCch
Confidence 34689999999 999999999999999999998642 37888888753 1245
Q ss_pred HHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhcccc----CCHHHHHHHHHHhcc
Q 010178 119 NLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (516)
Q Consensus 119 ~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~----~~~e~L~~~i~~~l~ 175 (516)
.+++.|+|. ++|+++++ ++|++. ..+.|. ++.++|++.|++...
T Consensus 103 ~~~~~~~v~~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 103 TISRQFDVLNEETGLADRGTFIIDPDGVIQ-------------AIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp HHHHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCCceeeEEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 788999999 99999998 566443 223332 378888888877653
No 194
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.83 E-value=5.8e-09 Score=97.43 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=73.1
Q ss_pred cCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------ccc
Q 010178 62 DTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KIN 117 (516)
Q Consensus 62 ~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~ 117 (516)
+.+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+.+. +.+
T Consensus 42 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 115 (195)
T 2bmx_A 42 EHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR------DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIK 115 (195)
T ss_dssp SSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTT
T ss_pred HhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCc
Confidence 334689999999 999999999999999999999742 48888888753 124
Q ss_pred HHHHHhCCCC-----ccCeEEEec-CCcccCCCCCCCccccchhhcccc----CCHHHHHHHHHHhcc
Q 010178 118 TNLCDKFSVG-----HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (516)
Q Consensus 118 ~~l~~~~~I~-----~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~----~~~e~L~~~i~~~l~ 175 (516)
..+++.|+|. ++|+++++. +|++. ..+.|. .+.++|++.|++...
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQ-------------FVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEE-------------EEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 5788999999 999998884 55433 233333 378999999987654
No 195
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.82 E-value=4.4e-09 Score=97.41 Aligned_cols=57 Identities=9% Similarity=0.046 Sum_probs=44.1
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++.+. .+.++.|+++
T Consensus 35 ~~~~G~~v~--l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~is~d 91 (185)
T 2gs3_A 35 KDIDGHMVN--LDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC------GLRILAFPCN 91 (185)
T ss_dssp EBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred EcCCCCEee--HHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC------CeEEEEEECc
Confidence 334444333 33345689999999999999999999999999999742 3889999875
No 196
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.78 E-value=6.1e-09 Score=97.47 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=71.1
Q ss_pred CCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------cc
Q 010178 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (516)
+++++||+|| ++||++|+.+.|.++++++++.+. .+.++.|+++. +.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK------GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADI 105 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECT
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECC
Confidence 5689999999 999999999999999999998642 38888888752 12
Q ss_pred cHHHHHhCCCC-----ccCeEEEe-cCCcccCCCCCCCccccchhhcccc----CCHHHHHHHHHHhc
Q 010178 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l~~~~~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~----~~~e~L~~~i~~~l 174 (516)
+..+++.|+|. ++|+++++ ++|++. ..+.|. .+.++|.+.|++..
T Consensus 106 ~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 106 TKSISRDYDVLFEEAIALRGAFLIDKNMKVR-------------HAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEEETTTEEE-------------EEEEESSSCCCHHHHHHHHHHHHH
T ss_pred chHHHHHhCCcccCCcccceEEEECCCCEEE-------------EEEecCCCCCCCHHHHHHHHHHHH
Confidence 46789999999 99988887 466443 233333 36788888887654
No 197
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.78 E-value=5.1e-09 Score=83.35 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=47.1
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc-ccHHHHHhCCCCccCeEEEecCCc
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-INTNLCDKFSVGHYPMLLWGSPSK 139 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d-~~~~l~~~~~I~~~PTl~~f~~g~ 139 (516)
++.||++|||+|+.+.|.++++++++. ..+.++.||. + ++.+++++|||+++||+++ +|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-------YTVEIVHLGT--DKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-------EEEEEEETTT--CSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-------CeEEEEEecC--ChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 788999999999999999998876543 2355555553 3 5788899999999999987 553
No 198
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.77 E-value=7.4e-09 Score=86.45 Aligned_cols=81 Identities=16% Similarity=0.281 Sum_probs=62.1
Q ss_pred CeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCC
Q 010178 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~ 145 (516)
.++++.|+++||++|+.+.|.++++++ .+.+..+|.+.+++.++..+|| .++|++++ +|+.
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~-----------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~~--~g~~----- 76 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD-----------RFILQEVDITLPENSTWYERYK-FDIPVFHL--NGQF----- 76 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS-----------SSEEEEEETTSSTTHHHHHHSS-SSCSEEEE--SSSE-----
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh-----------CCeEEEEECCCcchHHHHHHHC-CCCCEEEE--CCEE-----
Confidence 567999999999999999999876532 2678889986336789999999 99998743 3321
Q ss_pred CCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 146 EPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 146 ~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+ ..+..+.+.|.++|.+.+.
T Consensus 77 --------~--~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 77 --------L--MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp --------E--EESSCCHHHHHHHHHSSSC
T ss_pred --------E--EecCCCHHHHHHHHHHHHh
Confidence 1 2455788899999987654
No 199
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.76 E-value=1.9e-08 Score=94.13 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=70.7
Q ss_pred CCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--------------------------
Q 010178 63 TPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------------- 115 (516)
Q Consensus 63 ~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d-------------------------- 115 (516)
.+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++..
T Consensus 32 ~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D 105 (197)
T 1qmv_A 32 YKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL------GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLAD 105 (197)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEEC
T ss_pred HCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEEC
Confidence 34689999999 999999999999999999999742 388888887531
Q ss_pred ccHHHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhccc----cCCHHHHHHHHHHhc
Q 010178 116 INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (516)
Q Consensus 116 ~~~~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G----~~~~e~L~~~i~~~l 174 (516)
.+.++++.|+|. ++|+++++ ++|++. ..+.| .++.+++++.|.+..
T Consensus 106 ~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 106 VTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLR-------------QITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTCHHHHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CcHHHHHHcCCccCCCCceeeEEEEECCCCcEE-------------EEEeCCCCCCCCHHHHHHHHHhcc
Confidence 235789999999 89988877 455443 12222 467888888887653
No 200
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.74 E-value=1.6e-08 Score=96.38 Aligned_cols=84 Identities=15% Similarity=0.287 Sum_probs=61.6
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe--------------------------------
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (516)
.++++|++||++|||+|+++.|.++++.+. + +.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~--------v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 154 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G--------ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMA 154 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T--------EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C--------cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHh
Confidence 357899999999999999999999998752 1 3332221
Q ss_pred --------c--cccccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 112 --------C--ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 112 --------c--~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
| ..+++.++++++||+++||++ +.+| ..+.|..+.+.|.++|.+..
T Consensus 155 ~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG----------------~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 155 GKSVAPASCDVDIADHYALGVQLGVSGTPAVV-LSNG----------------TLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp TCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEE-CTTS----------------CEEESCCCHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHHHHHHcCCCccCEEE-EcCC----------------eEecCCCCHHHHHHHHHHhh
Confidence 1 113456789999999999994 4444 23567888999999887654
No 201
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.73 E-value=2e-08 Score=94.30 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=70.7
Q ss_pred CCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------cc
Q 010178 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (516)
+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++. |.
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~------~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~ 108 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI------GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADK 108 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECC
Confidence 4689999999 999999999999999999999742 48888888753 11
Q ss_pred cHHHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 117 NTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+..+++.|+|. ++|+++++ ++|++... .+......++.++|++.|++..
T Consensus 109 ~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~---------~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 109 TKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI---------TVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp TCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCccCCCCceeeEEEEECCCCEEEEE---------EeCCCCCCCCHHHHHHHHHHhh
Confidence 45788999999 99988887 45544321 0001122367788888887654
No 202
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.73 E-value=2e-08 Score=95.92 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=72.2
Q ss_pred cCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------
Q 010178 62 DTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------- 114 (516)
Q Consensus 62 ~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------------- 114 (516)
+.+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++.
T Consensus 53 d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 126 (220)
T 1zye_A 53 DFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV------NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLS 126 (220)
T ss_dssp GGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEE
T ss_pred HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEE
Confidence 334689999999 999999999999999999999642 38888888753
Q ss_pred cccHHHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 115 KINTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 115 d~~~~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|.+..+++.|+|. ++|+++++ ++|++... .+......++.+++++.|++..
T Consensus 127 D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~---------~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 127 DLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL---------SVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp CTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHhh
Confidence 1245789999999 99999998 45544321 0011122367888988887654
No 203
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.72 E-value=2.2e-08 Score=90.19 Aligned_cols=73 Identities=14% Similarity=0.175 Sum_probs=57.0
Q ss_pred cCCCCeEEEEEec-CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------cccHHHH
Q 010178 62 DTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLC 121 (516)
Q Consensus 62 ~~~~k~vlV~FyA-~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------d~~~~l~ 121 (516)
+.+++++||.||+ +||++|+...|.++++.+++.+. .+.++.|+++. |.+..+.
T Consensus 32 ~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (163)
T 3gkn_A 32 AHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA------GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC 105 (163)
T ss_dssp GGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH
T ss_pred HhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH
Confidence 3346789999998 99999999999999999999753 36777777642 2345688
Q ss_pred HhCCCCc------------cCeEEEec-CCcc
Q 010178 122 DKFSVGH------------YPMLLWGS-PSKF 140 (516)
Q Consensus 122 ~~~~I~~------------~PTl~~f~-~g~~ 140 (516)
+.|++.. +|+++++. +|++
T Consensus 106 ~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i 137 (163)
T 3gkn_A 106 RAFDVIKEKNMYGKQVLGIERSTFLLSPEGQV 137 (163)
T ss_dssp HHTTCEEEEEETTEEEEEECCEEEEECTTSCE
T ss_pred HHhCCccccccccccccCcceEEEEECCCCeE
Confidence 8899987 89888874 5544
No 204
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.70 E-value=3.8e-08 Score=106.12 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=75.2
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCc
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH 128 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~ 128 (516)
..++++.++... +..++..++.||++|||+|+.+.|.+++++..+. .+.+..+|. +++++++.+|+|++
T Consensus 102 ~~~~~~~~~~i~-~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--------~v~~~~vd~--~~~~~~~~~~~i~s 170 (521)
T 1hyu_A 102 SKEAQSLLEQIR-DIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--------RIKHTAIDG--GTFQNEITERNVMG 170 (521)
T ss_dssp CCSCHHHHHHHH-HCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--------TEEEEEEET--TTCHHHHHHTTCCS
T ss_pred CCCCHHHHHHHH-hcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--------ceEEEEEec--hhhHHHHHHhCCCc
Confidence 345555555543 3334667999999999999999999999998863 489999996 57899999999999
Q ss_pred cCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 129 YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 129 ~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
+||+++ +|+.. ..|..+.++|.+++.+
T Consensus 171 vPt~~i--~g~~~---------------~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 171 VPAVFV--NGKEF---------------GQGRMTLTEIVAKVDT 197 (521)
T ss_dssp SSEEEE--TTEEE---------------EESCCCHHHHHHHHCC
T ss_pred cCEEEE--CCEEE---------------ecCCCCHHHHHHHHhh
Confidence 999977 55321 2377888999998854
No 205
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.70 E-value=3.9e-08 Score=89.92 Aligned_cols=86 Identities=15% Similarity=0.263 Sum_probs=65.3
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc------------------------------
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA------------------------------ 113 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~------------------------------ 113 (516)
.++++|++|+++|||+|+.+.|.++++.+++. .+.+...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~--------~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf 92 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP--------NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALM 92 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC--------CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35788999999999999999999999998863 2444444321
Q ss_pred -------------------------------------ccccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhh
Q 010178 114 -------------------------------------LKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRA 156 (516)
Q Consensus 114 -------------------------------------~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~ 156 (516)
.+.+..+++++||.++||+++ +| ..
T Consensus 93 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g----------------~~ 154 (175)
T 3gyk_A 93 GMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED----------------AL 154 (175)
T ss_dssp TCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT----------------EE
T ss_pred hcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC----------------EE
Confidence 123456778999999999987 33 23
Q ss_pred ccccCCHHHHHHHHHHhcc
Q 010178 157 LEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 157 ~~G~~~~e~L~~~i~~~l~ 175 (516)
+.|..+.+.|.+.|++.+.
T Consensus 155 ~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 155 VPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp ECSCCCHHHHHHHHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHh
Confidence 5688899999999987653
No 206
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.70 E-value=1.9e-08 Score=94.45 Aligned_cols=110 Identities=14% Similarity=0.208 Sum_probs=69.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChh-hhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~-C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (516)
+...++..+. +.+.+++++||+||++||++ |+.+.|.+.++.+.+.+.. .+.+.++.|+++.
T Consensus 26 l~d~~G~~v~--l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~---~~~v~vv~Is~D~~~d~~~~~~~~~ 100 (200)
T 2b7k_A 26 LEDMYGNEFT--EKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKY---GITLQPLFITCDPARDSPAVLKEYL 100 (200)
T ss_dssp EEETTSCEEE--GGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEEESCTTTCCHHHHHHHH
T ss_pred EEcCCCCEEe--HHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhh---CCceEEEEEECCCCCCCHHHHHHHH
Confidence 3444444443 23334689999999999997 9999999999888775210 0247777777652
Q ss_pred --------------cccHHHHHhCCCC-ccC---------------eEEEe-cCCcccCCCCCCCccccchhhccccCCH
Q 010178 115 --------------KINTNLCDKFSVG-HYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTA 163 (516)
Q Consensus 115 --------------d~~~~l~~~~~I~-~~P---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~ 163 (516)
+....+++.|||. +.| +++++ ++|++ +..+.|..+.
T Consensus 101 ~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i-------------~~~~~g~~~~ 167 (200)
T 2b7k_A 101 SDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF-------------VDALGRNYDE 167 (200)
T ss_dssp TTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCE-------------EEEECTTCCT
T ss_pred HHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcE-------------EEEeCCCCCH
Confidence 1124578889987 454 54554 55543 2345666777
Q ss_pred HHHHHHHHHhcc
Q 010178 164 DGLLTWINKQTS 175 (516)
Q Consensus 164 e~L~~~i~~~l~ 175 (516)
+.+.+.|.+.+.
T Consensus 168 ~~~~~~i~~~l~ 179 (200)
T 2b7k_A 168 KTGVDKIVEHVK 179 (200)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777776664
No 207
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.69 E-value=2.8e-08 Score=90.26 Aligned_cols=47 Identities=9% Similarity=0.186 Sum_probs=39.3
Q ss_pred CCCCeEEEEEecCCCh-hhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 63 TPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 63 ~~~k~vlV~FyA~WC~-~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
.+++++||+||++||+ +|+...|.+.++++.+.+.+ ..+.|+.|+++
T Consensus 31 ~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~----~~~~vv~is~d 78 (174)
T 1xzo_A 31 LKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAEN----IDVRIISFSVD 78 (174)
T ss_dssp GTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred cCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcC----CcEEEEEEEeC
Confidence 3468999999999999 99999999999999987432 24788888875
No 208
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.68 E-value=2.7e-08 Score=92.56 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=69.7
Q ss_pred CCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------cc
Q 010178 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (516)
+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++. |.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~ 103 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER------NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDI 103 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECC
Confidence 4689999999 999999999999999999999642 37888888752 11
Q ss_pred cHHHHHhCCCC-----ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l~~~~~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+..+++.|+|. .+|+++++ ++|++... .+......++.+++++.|++..
T Consensus 104 ~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~---------~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 104 SKSIARSYDVLFNESVALRAFVLIDKQGVVQHL---------LVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp TSHHHHHTTCEETTTEECCEEEEECTTSBEEEE---------EEGGGSSGGGHHHHHHHHHHHH
T ss_pred cHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEE---------EeCCCCCCCCHHHHHHHHHHHh
Confidence 35788999999 89999998 55654321 0000112356788888887654
No 209
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.66 E-value=5.2e-08 Score=77.81 Aligned_cols=77 Identities=19% Similarity=0.267 Sum_probs=58.4
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCC--CCccCeEEEecCCcccCCC
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLWGSPSKFVAGS 144 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~--I~~~PTl~~f~~g~~~~~~ 144 (516)
++.|+++|||+|+.+.|.+++++.++. .+.+..+|++.+. ..++.+++| +.++||+++ +|+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--------~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~--~g~~---- 68 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--------DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV--DQQH---- 68 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--------SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE--TTEE----
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEEEEecccChHHHHHHHHHhCCCCceeCeEEE--CCEE----
Confidence 688999999999999999999998874 3788889975322 247899999 999999843 4422
Q ss_pred CCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 145 WEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 145 ~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+.| .++|.+++++.+
T Consensus 69 ------------i~~---~~~l~~~~~~~~ 83 (85)
T 1ego_A 69 ------------IGG---YTDFAAWVKENL 83 (85)
T ss_dssp ------------EES---SHHHHHHHHHHH
T ss_pred ------------EEC---HHHHHHHHHHhc
Confidence 122 367888887654
No 210
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.66 E-value=8.1e-08 Score=91.56 Aligned_cols=57 Identities=12% Similarity=0.215 Sum_probs=44.5
Q ss_pred ceecC-cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 48 AVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 48 v~~L~-~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+..++ ++.+. +.+.+++++||+|||+|||+|+ .+|.+++++++|.+. .+.|+.|+|+
T Consensus 40 l~d~~~G~~v~--Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~------g~~Vlgvs~d 97 (215)
T 2i3y_A 40 AIALNKNEYVS--FKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY------GLVVLGFPCN 97 (215)
T ss_dssp EEBSSSSCEEE--GGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred eeeCCCCCEEc--HHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC------CeEEEEEEcc
Confidence 33444 44443 4555679999999999999999 899999999999752 3899999875
No 211
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.65 E-value=6.5e-08 Score=92.50 Aligned_cols=93 Identities=12% Similarity=0.175 Sum_probs=68.5
Q ss_pred hcCCCCeEEEEEec-CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc------------------------
Q 010178 61 RDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (516)
Q Consensus 61 ~~~~~k~vlV~FyA-~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (516)
.+.+++++||.||+ +||++|+...|.+++++++|++. .+.|+.|+++..
T Consensus 65 ~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (222)
T 3ztl_A 65 KDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR------NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLL 138 (222)
T ss_dssp GGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEE
T ss_pred HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEE
Confidence 34456899999997 99999999999999999999753 388888887531
Q ss_pred --ccHHHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhccc----cCCHHHHHHHHHH
Q 010178 116 --INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINK 172 (516)
Q Consensus 116 --~~~~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G----~~~~e~L~~~i~~ 172 (516)
.+..+.+.|+|. .+|+++++ ++|++.. .+.| ....+++++.|.+
T Consensus 139 ~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~-------------~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 139 ADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQ-------------ITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp ECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEE-------------EEEECTTBCCCHHHHHHHHHH
T ss_pred eCCchHHHHHcCCeecCCCCccceEEEECCCCeEEE-------------EEecCCCCCCCHHHHHHHHHH
Confidence 234678899998 89998887 4554432 2222 2456777777754
No 212
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.59 E-value=8.7e-08 Score=91.07 Aligned_cols=96 Identities=11% Similarity=0.150 Sum_probs=69.4
Q ss_pred CCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------cc
Q 010178 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (516)
+++++||.|| ++||++|+.+.|.+.+++++|.+. .+.|+.|+++. |.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 124 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER------NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDI 124 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECC
Confidence 5689999999 999999999999999999999642 37888887642 12
Q ss_pred cHHHHHhCCCC-----ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l~~~~~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+.++++.|+|. .+|+++++ ++|++... .+......++.++|++.|++..
T Consensus 125 ~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~---------~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 125 TKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL---------LVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCcccEEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHHH
Confidence 45789999999 89988877 45544321 0000112357888888887654
No 213
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.56 E-value=1.6e-07 Score=86.57 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=61.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (516)
+...+++.+. +.+.+++++||.|| ++||++|+...|.++++++++.+. .+.++.|.++.
T Consensus 36 l~~~~G~~v~--l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~------~~~vv~Vs~D~~~~~~~~~~~~~ 107 (179)
T 3ixr_A 36 LMLSGSTCKT--LSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI------NATVLGVSRDSVKSHDSFCAKQG 107 (179)
T ss_dssp EEEGGGEEEC--GGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT------TEEEEEEESCCHHHHHHHHHHHT
T ss_pred EECCCCCEEe--HHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHcC
Confidence 3444454443 44445788999998 999999999999999999999753 37788887652
Q ss_pred -------cccHHHHHhCCCCc------------cCeEEEe-cCCcc
Q 010178 115 -------KINTNLCDKFSVGH------------YPMLLWG-SPSKF 140 (516)
Q Consensus 115 -------d~~~~l~~~~~I~~------------~PTl~~f-~~g~~ 140 (516)
|.+..+++.|+|.. .|+++++ ++|++
T Consensus 108 ~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I 153 (179)
T 3ixr_A 108 FTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRI 153 (179)
T ss_dssp CCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBE
T ss_pred CceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEE
Confidence 23456788888864 5777776 45544
No 214
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.56 E-value=1.8e-08 Score=90.99 Aligned_cols=99 Identities=12% Similarity=0.122 Sum_probs=58.7
Q ss_pred HhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------cccHH
Q 010178 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTN 119 (516)
Q Consensus 60 l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------d~~~~ 119 (516)
+.+.++++++|.|| ++||++|+.+.|.++++++++++. .+.++.|+.+. |.+.+
T Consensus 25 l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~------~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~ 98 (157)
T 4g2e_A 25 LSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV------NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNRE 98 (157)
T ss_dssp GGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC------SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSH
T ss_pred HHHHCCCeEEEEecCCCCCCccccchhhccccccccccc------CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcH
Confidence 34445688999999 999999999999999999888753 36777776542 23456
Q ss_pred HHHhCCCC-----------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 120 LCDKFSVG-----------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 120 l~~~~~I~-----------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
+++.|||. ..|+++++ ++|++... .......+..+.+++++.|+.
T Consensus 99 v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~--------~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 99 VVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK--------WVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp HHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE--------EEESSTTCCCCHHHHHHHHHH
T ss_pred HHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE--------EECCCCCCCCCHHHHHHHHHH
Confidence 77777763 35655555 45544210 000112345577888887754
No 215
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.54 E-value=1.7e-07 Score=84.80 Aligned_cols=90 Identities=9% Similarity=0.086 Sum_probs=64.2
Q ss_pred CCCeEEEEEecCC-ChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------c-ccHHHH
Q 010178 64 PATYAVVEFFANW-CPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------K-INTNLC 121 (516)
Q Consensus 64 ~~k~vlV~FyA~W-C~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------d-~~~~l~ 121 (516)
++++++|.||++| |++|+.+.|.++++++++. .+.++.|+.+. + .+..+.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~--------~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 114 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLG--------DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG 114 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHS--------SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcC--------CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH
Confidence 3588999999999 9999999999999999982 26677777642 1 345688
Q ss_pred HhCCCCc------cCeEEEe-cCCcccCCCCCCCccccchhhcc-----ccCCHHHHHHHHHHhc
Q 010178 122 DKFSVGH------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALE-----DWQTADGLLTWINKQT 174 (516)
Q Consensus 122 ~~~~I~~------~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~-----G~~~~e~L~~~i~~~l 174 (516)
+.|+|.. +|+++++ ++|++. ..+. ...+.+++++.|++.+
T Consensus 115 ~~~~v~~~~~g~~~p~~~lid~~G~i~-------------~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 115 EAFGVYIKELRLLARSVFVLDENGKVV-------------YAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp HHTTCBBTTTCSBCCEEEEECTTSCEE-------------EEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred HHhCCccccCCceeeEEEEEcCCCcEE-------------EEEecCCcCCCCCHHHHHHHHHHhh
Confidence 8899887 4877776 455433 2222 2235677888776643
No 216
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.54 E-value=1e-07 Score=90.40 Aligned_cols=84 Identities=18% Similarity=0.234 Sum_probs=60.4
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe--------------------------------
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (516)
.++++|++|+++|||+|+++.|.++++.+. + -.+.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~------v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~ 156 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G------ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGN 156 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T------EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C------cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCC
Confidence 357899999999999999999999987652 1 012222221
Q ss_pred ------cc--ccccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 112 ------CA--LKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 112 ------c~--~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
|. .+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|++
T Consensus 157 ~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~----------------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 157 LPKEVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE----------------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC----------------CCCSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE----------------EecCCCCHHHHHHHHHh
Confidence 11 124567889999999999987 4552 35677889999998865
No 217
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.49 E-value=3.4e-07 Score=86.64 Aligned_cols=47 Identities=6% Similarity=0.103 Sum_probs=39.5
Q ss_pred HhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+.+.+++++||+|||+|||+| ..+|.+++++++|.+. .+.|+.|+|+
T Consensus 33 Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~------g~~vlgvs~d 79 (207)
T 2r37_A 33 FKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF------GLVILGFPCN 79 (207)
T ss_dssp GGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC------CEEEEEEECc
Confidence 344457999999999999999 6899999999999752 3889999874
No 218
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.47 E-value=3.7e-07 Score=86.56 Aligned_cols=99 Identities=11% Similarity=0.114 Sum_probs=67.2
Q ss_pred hcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc------------------------
Q 010178 61 RDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (516)
Q Consensus 61 ~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (516)
.+.+++++||.|| ++||++|+.+.|.+.+++++|.+. .+.|+.|+++..
T Consensus 44 ~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l 117 (211)
T 2pn8_A 44 TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI------NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLL 117 (211)
T ss_dssp GGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEE
T ss_pred HHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEE
Confidence 3345689999999 999999999999999999999742 377888876421
Q ss_pred --ccHHHHHhCCCC------ccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 116 --INTNLCDKFSVG------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 116 --~~~~l~~~~~I~------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.+..+++.|+|. .+|+++++. +|++... .+......++.+++++.|+...
T Consensus 118 ~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~---------~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 118 SDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI---------TLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp ECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred ECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHhh
Confidence 123567778884 588887774 4543310 0000112357788888887644
No 219
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.46 E-value=3.4e-07 Score=83.54 Aligned_cols=109 Identities=11% Similarity=0.070 Sum_probs=70.0
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCCh-hhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~-~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (516)
...+++.+. +.+.+++++||.||++||+ .|....|.++++.+++...+ ..+.++.|.++.
T Consensus 14 ~d~~G~~v~--l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~----~~~~vv~is~d~~d~~~~~~~~~~~ 87 (170)
T 3me7_A 14 VDSYGNEFQ--LKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPG----KDFWVITFTFDPKDTLEDIKRFQKE 87 (170)
T ss_dssp EETTCCEEE--GGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBT----TTBEEEEEECCTTCCHHHHHHHHHH
T ss_pred EcCCcCEEc--hHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcC----CceEEEEEECCCCCCHHHHHHHHHH
Confidence 344444433 2333468999999999997 69999999999999996422 246777776541
Q ss_pred ----------------cccHHHHHhCCC---------CccCeEEEe-cCCcccCCCCCCCccccchhhcccc-CCHHHHH
Q 010178 115 ----------------KINTNLCDKFSV---------GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW-QTADGLL 167 (516)
Q Consensus 115 ----------------d~~~~l~~~~~I---------~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~-~~~e~L~ 167 (516)
++...+++.||+ ...|+++++ ++|++ +..+.|. .+.++|.
T Consensus 88 ~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i-------------~~~~~g~~~~~~~i~ 154 (170)
T 3me7_A 88 YGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI-------------KDYIYGVNYNYLEFV 154 (170)
T ss_dssp TTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBE-------------EEEEESSSCCHHHHH
T ss_pred cCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeE-------------EEEEeCCCCCHHHHH
Confidence 112345666553 344656555 34432 2334453 6789999
Q ss_pred HHHHHhccc
Q 010178 168 TWINKQTSR 176 (516)
Q Consensus 168 ~~i~~~l~~ 176 (516)
+.|.+....
T Consensus 155 ~~l~~~~~~ 163 (170)
T 3me7_A 155 NALRLARGE 163 (170)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhhcc
Confidence 999887754
No 220
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.45 E-value=3.4e-07 Score=83.80 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=52.9
Q ss_pred CCCeEEEEEecCC-ChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------cccHHHHH
Q 010178 64 PATYAVVEFFANW-CPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------KINTNLCD 122 (516)
Q Consensus 64 ~~k~vlV~FyA~W-C~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~--------------------d~~~~l~~ 122 (516)
+++++||.||++| |++|+.+.|.+++++++ . .+.|+.|+.+. |.+..+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 113 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGE 113 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHH
Confidence 4688999999999 99999999999999987 3 26777777642 11356889
Q ss_pred hCCCCcc---------CeEEEe-cCCccc
Q 010178 123 KFSVGHY---------PMLLWG-SPSKFV 141 (516)
Q Consensus 123 ~~~I~~~---------PTl~~f-~~g~~~ 141 (516)
.|+|... |+++++ ++|++.
T Consensus 114 ~~gv~~~~~~~~g~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 114 DYGVTIADGPMAGLLARAIVVIGADGNVA 142 (175)
T ss_dssp HTTCBBCSSTTTTSBCSEEEEECTTSBEE
T ss_pred HhCCcccccccCCcccceEEEECCCCeEE
Confidence 9999887 777666 456443
No 221
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.45 E-value=4.4e-07 Score=81.42 Aligned_cols=68 Identities=6% Similarity=0.086 Sum_probs=51.9
Q ss_pred CeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------cccHHHHHhCC
Q 010178 66 TYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLCDKFS 125 (516)
Q Consensus 66 k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------d~~~~l~~~~~ 125 (516)
+++||.|| ++||++|+...|.+.++++++.+. + .++.|+++. |.+..+++.||
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-----~--~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-----A--AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-----C--EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-----C--cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 47899997 999999999999999999999742 2 556665532 23456888999
Q ss_pred CCccC-------eEEEecCCccc
Q 010178 126 VGHYP-------MLLWGSPSKFV 141 (516)
Q Consensus 126 I~~~P-------Tl~~f~~g~~~ 141 (516)
|...| |+++ ++|++.
T Consensus 109 v~~~p~~g~~~~~~li-~~G~i~ 130 (159)
T 2a4v_A 109 AKKTPLSGSIRSHFIF-VDGKLK 130 (159)
T ss_dssp CBSSSSSCBCCEEEEE-ETTEEE
T ss_pred CcccccCCccceEEEE-cCCEEE
Confidence 99998 5555 777543
No 222
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.41 E-value=2e-06 Score=82.29 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=86.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
.+.+.+++.+++....... .+.+++.|+.+||++|..+.+.|+++|+.++ +.+.|+.+|++.+.++.+++.|
T Consensus 112 ~plv~e~t~~n~~~~~~~~-~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k-------~~i~F~~vd~~~~~~~~~l~~f 183 (227)
T 4f9z_D 112 LHMVTEYNPVTVIGLFNSV-IQIHLLLIMNKASPEYEENMHRYQKAAKLFQ-------GKILFILVDSGMKENGKVISFF 183 (227)
T ss_dssp CCSEEECCHHHHHHHHHSS-CCEEEEEEECTTSTTHHHHHHHHHHHHHHTT-------TTCEEEEEETTSGGGHHHHHHT
T ss_pred CCceeecCcccHHHHhccC-CceEEEEEEcCCcchHHHHHHHHHHHHHHhh-------CCEEEEEeCCccHhHHHHHHHc
Confidence 4567889999998877653 2455667778999999999999999999997 4589999998655677889999
Q ss_pred CCC--ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 SVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
|+. .+|++.++..... .....-.+..+.+.|.+|+++.+.
T Consensus 184 gl~~~~~P~~~i~~~~~~-----------~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 184 KLKESQLPALAIYQTLDD-----------EWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp TCCGGGCSEEEEEESSSC-----------CEEEETTCCCCHHHHHHHHHHHHT
T ss_pred CCCcccCCEEEEEECCCC-----------ccccCCcCCCCHHHHHHHHHHHhC
Confidence 998 8999999864210 001111367899999999988753
No 223
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.40 E-value=4.4e-07 Score=86.75 Aligned_cols=92 Identities=13% Similarity=0.175 Sum_probs=65.5
Q ss_pred CCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--------------------------c
Q 010178 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (516)
+++++||.|| ++||++|+.+.|.+.+++++|.+. .+.|+.|+++.. .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 128 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK------NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDI 128 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECC
Confidence 5689999999 999999999999999999998642 377777776421 1
Q ss_pred cHHHHHhCCC-----CccCeEEEec-CCcccCCCCCCCccccchhhccc----cCCHHHHHHHHHHhc
Q 010178 117 NTNLCDKFSV-----GHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l~~~~~I-----~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G----~~~~e~L~~~i~~~l 174 (516)
+..+++.|+| ..+|+++++. +|++. ..+.| ..+.+++++.|++..
T Consensus 129 ~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~-------------~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 129 NKDISKNYNVLYDNSFALRGLFIIDKNGCVR-------------HQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEECTTSBEE-------------EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCcccCCCccceEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHh
Confidence 2356777888 3678887774 45433 12222 357788888887654
No 224
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.40 E-value=7.8e-07 Score=86.13 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=68.7
Q ss_pred HhcCCCCeEEEEEec-CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------------------
Q 010178 60 LRDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (516)
Q Consensus 60 l~~~~~k~vlV~FyA-~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (516)
+.+.+++++||.||+ +||++|+...|.+.+++++|++. .+.++.|+++.
T Consensus 72 Lsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~------gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~ 145 (240)
T 3qpm_A 72 LSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI------NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPL 145 (240)
T ss_dssp GGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCE
T ss_pred HHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeE
Confidence 344456899999999 99999999999999999999753 37788887652
Q ss_pred --cccHHHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 115 --KINTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 115 --d~~~~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
|.+..+++.|||. .+|+++++ ++|++... .+......++.+++++.|..
T Consensus 146 l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~---------~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 146 LSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI---------TMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp EECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHH
T ss_pred EeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEE---------EecCCCCCCCHHHHHHHHHH
Confidence 1234678889987 68988877 45544321 00011224667888877765
No 225
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.38 E-value=6.7e-07 Score=82.87 Aligned_cols=92 Identities=10% Similarity=-0.018 Sum_probs=63.9
Q ss_pred CCCeEEEEEec-CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------cccHH
Q 010178 64 PATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTN 119 (516)
Q Consensus 64 ~~k~vlV~FyA-~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~~~ 119 (516)
+++++||.||+ +||++|+.+.|.++++++++.+. .+.++.|+++. |.+..
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~ 102 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL------GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGA 102 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchH
Confidence 35889999995 99999999999999999998642 37788887642 11234
Q ss_pred HHHhCCCC------ccCeEEEec-CCcccCCCCCCCccccchhhccc----cCCHHHHHHHHHHhc
Q 010178 120 LCDKFSVG------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (516)
Q Consensus 120 l~~~~~I~------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G----~~~~e~L~~~i~~~l 174 (516)
+++.|||. ..|+++++. +|++. ..+.| .++.+++++.|++..
T Consensus 103 ~~~~ygv~~~~~g~~~p~~~lID~~G~i~-------------~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 103 LTRNFDNMREDEGLADRATFVVDPQGIIQ-------------AIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCccCCCCceeeEEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHH
Confidence 66677776 368777764 45432 22222 246888888887654
No 226
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.36 E-value=1.1e-07 Score=86.49 Aligned_cols=97 Identities=12% Similarity=0.085 Sum_probs=65.4
Q ss_pred CCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------cccHHHHHhC
Q 010178 65 ATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLCDKF 124 (516)
Q Consensus 65 ~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------d~~~~l~~~~ 124 (516)
+++++|.|| ++||++|+...|.++++++++++. .+.++.|+.+. |.+.++++.|
T Consensus 33 Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~------~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~y 106 (164)
T 4gqc_A 33 GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA------NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLY 106 (164)
T ss_dssp SSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS------SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHT
T ss_pred CCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc------CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHc
Confidence 578899998 999999999999999999988753 36777777542 3455678888
Q ss_pred CCC----------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 125 SVG----------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 125 ~I~----------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
||. ..|+++++ ++|++... .......+..+.+++++.+++..+
T Consensus 107 gv~~~~~~~~~~~~~p~tflID~~G~I~~~--------~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 107 NVYHEDLKGLKMVAKRAVFIVKPDGTVAYK--------WVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TCEEEEETTEEEEECCEEEEECTTSBEEEE--------EECSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCcccccccCcCCeeeEEEEECCCCEEEEE--------EEeCCCCCCCCHHHHHHHHHHHhc
Confidence 874 35766665 45544310 000112334578888888876554
No 227
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.35 E-value=7.7e-07 Score=85.78 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=52.6
Q ss_pred CCCeEEEEEe-cCCChhhh-hhhHHHHHHHHHhCCCCCCCCCeE-EEEEEeccc--------------------cccHHH
Q 010178 64 PATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL--------------------KINTNL 120 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~-~~~P~~~~la~~~~~~~~~~~~~v-~~~~VDc~~--------------------d~~~~l 120 (516)
+++++||+|| ++||++|+ .+.|.++++++++++. .+ .++.|+.+. |.+..+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~ 105 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY------GVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEF 105 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT------TCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHH
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHH
Confidence 3578999999 99999999 9999999999998643 36 677776542 223457
Q ss_pred HHhCCCC-----------ccCeEEEecCCccc
Q 010178 121 CDKFSVG-----------HYPMLLWGSPSKFV 141 (516)
Q Consensus 121 ~~~~~I~-----------~~PTl~~f~~g~~~ 141 (516)
++.||+. ..|+.+++++|++.
T Consensus 106 ~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~ 137 (241)
T 1nm3_A 106 TEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVE 137 (241)
T ss_dssp HHHTTCEEECTTTTCCEEECCEEEEEETTEEE
T ss_pred HHHhCceeecccccCcccceeEEEEEECCEEE
Confidence 7778875 34765555666543
No 228
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.34 E-value=7.4e-07 Score=80.41 Aligned_cols=45 Identities=9% Similarity=0.073 Sum_probs=36.3
Q ss_pred hcCCCCeEEEEEec-CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 61 RDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 61 ~~~~~k~vlV~FyA-~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
.+.+++++||.||+ +||++|+...|.++++++++. .+.++.|+.+
T Consensus 38 ~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~--------~v~vv~is~d 83 (163)
T 1psq_A 38 ADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLD--------NTVVLTVSMD 83 (163)
T ss_dssp GGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--------TEEEEEEESS
T ss_pred HHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHcC--------CcEEEEEECC
Confidence 34456899999995 999999999999999988771 2777777764
No 229
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.34 E-value=8.5e-07 Score=82.50 Aligned_cols=41 Identities=29% Similarity=0.515 Sum_probs=35.2
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
++++||+||++|||+|+.+.|.++++.+.+. +.+.+..++.
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~~~ 65 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTAP-------QDVVLKQVPI 65 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTCC-------TTEEEEEEEC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHCC-------CCeEEEEEec
Confidence 5789999999999999999999999998875 2477777765
No 230
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.31 E-value=7.3e-07 Score=80.58 Aligned_cols=43 Identities=9% Similarity=0.227 Sum_probs=34.8
Q ss_pred CCCeEEEEEe-cCCChhhh-hhhHHHHHHHHHhCCCCCCCCCeEE-EEEEec
Q 010178 64 PATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGPNAAHPGIIL-MTRVDC 112 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~-~~~P~~~~la~~~~~~~~~~~~~v~-~~~VDc 112 (516)
++++++|.|| ++||++|+ ...|.++++++++++.+ +. ++.|+.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~------v~~vv~Is~ 79 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG------VTEILCISV 79 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT------CCCEEEEES
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC------CCEEEEEEC
Confidence 3588999999 89999999 99999999999986432 55 666654
No 231
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.30 E-value=6.8e-07 Score=81.52 Aligned_cols=44 Identities=14% Similarity=0.233 Sum_probs=35.5
Q ss_pred CCCeEEEEEe-cCCChhhhh-hhHHHHHHHHHhCCCCCCCCCeE-EEEEEecc
Q 010178 64 PATYAVVEFF-ANWCPACRN-YKPQYEKVARLFNGPNAAHPGII-LMTRVDCA 113 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~~-~~P~~~~la~~~~~~~~~~~~~v-~~~~VDc~ 113 (516)
++++++|.|| ++||++|+. ..|.++++++++++. .+ .++.|+.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~------gv~~vv~Is~d 76 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK------GVDIIACMAVN 76 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT------TCCEEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEeCC
Confidence 3577889887 999999999 999999999998643 36 67777653
No 232
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.30 E-value=9e-07 Score=85.69 Aligned_cols=88 Identities=17% Similarity=0.269 Sum_probs=62.0
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc-------------------------------
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA------------------------------- 113 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~------------------------------- 113 (516)
++.+|++|+.+|||+|+++.|.++++.+. +.|.|..+...
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS---------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT---------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC---------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 46789999999999999999999887653 12555443321
Q ss_pred -----------------ccccHHHHHhCCCCccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 114 -----------------LKINTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 114 -----------------~d~~~~l~~~~~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
.+.+..+++++||+++||+++.. +|+ +..+.|..+.+.|.++|++...
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~--------------~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT--------------LQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE--------------EEEEESSCCHHHHHHHTTC---
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC--------------EEEecCCCCHHHHHHHHHHHHH
Confidence 12345678899999999999864 231 1245788899999998876543
No 233
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.29 E-value=1.2e-06 Score=81.25 Aligned_cols=40 Identities=23% Similarity=0.433 Sum_probs=33.2
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD 111 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VD 111 (516)
++++||+||++|||+|+.+.|.+.++.+.+.+ .|.+..+.
T Consensus 25 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-------~v~~~~~p 64 (192)
T 3h93_A 25 GKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-------DVHFVRLP 64 (192)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-------TEEEEEEE
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-------CeEEEEEe
Confidence 57899999999999999999999999988752 36665444
No 234
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.29 E-value=9.6e-07 Score=85.96 Aligned_cols=95 Identities=7% Similarity=0.064 Sum_probs=67.9
Q ss_pred CCe-EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------------cccH
Q 010178 65 ATY-AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------KINT 118 (516)
Q Consensus 65 ~k~-vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~-------------------------d~~~ 118 (516)
+++ +|+.||++||++|..+.|.+.+++++|.+. .+.++.|+++. |.+.
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~------gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL------GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC------CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 465 466889999999999999999999999743 38888888753 2245
Q ss_pred HHHHhCCCC-------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 119 NLCDKFSVG-------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 119 ~l~~~~~I~-------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.+++.|||. ++|+++++ ++|++... .+....-+++.++|+..|+...
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~---------~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTM---------LYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEE---------EecCCcccchhHHHHHHHHHHH
Confidence 688999997 89988877 45544321 0011112368899998887643
No 235
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.28 E-value=7.2e-07 Score=80.77 Aligned_cols=105 Identities=10% Similarity=0.118 Sum_probs=64.8
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (516)
..++++.+. +.+.++++++|.|| ++||++|+...|.+++++++ . .+.++.|+.+.
T Consensus 32 ~~~~G~~~~--l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--------~~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 32 LDNDLNQVT--LADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--------EGIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp ECTTSCEEE--GGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--------TSEEEEEESSCHHHHHHHHHHHTC
T ss_pred EcCCCCEEe--HHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--------CCEEEEEECCCHHHHHHHHHHcCC
Confidence 344444433 34445688999999 78999999999999988766 2 25667776542
Q ss_pred -------cc-cHHHHHhCCCCc------cCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 115 -------KI-NTNLCDKFSVGH------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 115 -------d~-~~~l~~~~~I~~------~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
|. +..+.+.||+.. .|+++++ ++|++.... ......+..+.+++++.|++
T Consensus 101 ~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~--------~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 101 DNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKE--------IVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp SSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE--------ECSBTTSCCCHHHHHHHHHT
T ss_pred CceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEE--------EcCCcccCCCHHHHHHHHhc
Confidence 22 346677777775 7877776 355443210 00112234566777776653
No 236
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.23 E-value=1.7e-06 Score=84.55 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=66.7
Q ss_pred HhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc-----------------------
Q 010178 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------- 115 (516)
Q Consensus 60 l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d----------------------- 115 (516)
+.+.+++++||.|| ++||++|....|.+.+++++|++. .+.|+.|+++..
T Consensus 86 Lsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~------gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~ 159 (254)
T 3tjj_A 86 LTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI------NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPL 159 (254)
T ss_dssp GGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCE
T ss_pred HHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccce
Confidence 34445789999999 999999999999999999999753 378888876521
Q ss_pred ---ccHHHHHhCCCC------ccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 116 ---INTNLCDKFSVG------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 116 ---~~~~l~~~~~I~------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
.+..+++.|||. .+|+++++. +|++... .+....-.++.+++++.|..
T Consensus 160 l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~---------~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 160 LSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI---------TLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp EECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHH
T ss_pred eeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEE---------EecCCCCCCCHHHHHHHHHh
Confidence 234577778875 578777764 4543210 00011224677788777754
No 237
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.23 E-value=1.3e-06 Score=79.30 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=37.3
Q ss_pred HhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 60 l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+.+.++++++|.|| ++||++|+...|.+.++++++. .+.++.|+++
T Consensus 42 l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~--------~v~vv~Is~d 88 (171)
T 2yzh_A 42 VGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGME--------GVDVTVVSMD 88 (171)
T ss_dssp ESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--------TEEEEEEESS
T ss_pred HHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHcC--------CceEEEEeCC
Confidence 34445789999999 8999999999999999988771 2777777764
No 238
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.22 E-value=1.7e-06 Score=78.31 Aligned_cols=46 Identities=13% Similarity=0.216 Sum_probs=36.8
Q ss_pred HhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 60 l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+.+.+++++||+|| ++||++|+...|.++++++++. .+.++.|+.+
T Consensus 38 l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~--------~v~vv~Is~d 84 (165)
T 1q98_A 38 LNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLS--------NTIVLCISAD 84 (165)
T ss_dssp GGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHST--------TEEEEEEESS
T ss_pred hHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHcC--------CCEEEEEeCC
Confidence 33445689999999 8999999999999999999882 2667777653
No 239
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.19 E-value=2e-06 Score=79.85 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=33.1
Q ss_pred CCeE-EEEEecCCChhhhh-hhHHHHHHHHHhCCCCCCCCCeEE-EEEEecc
Q 010178 65 ATYA-VVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGIIL-MTRVDCA 113 (516)
Q Consensus 65 ~k~v-lV~FyA~WC~~C~~-~~P~~~~la~~~~~~~~~~~~~v~-~~~VDc~ 113 (516)
++++ |+.||++||++|+. +.|.+++++++|++.+ +. ++.|+.+
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g------v~~vv~Is~d 101 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG------VDDIAVVAVN 101 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT------CCEEEEEESS
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC------CCEEEEEECC
Confidence 4654 55566999999999 7999999999997533 55 7777664
No 240
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.19 E-value=2.5e-06 Score=80.04 Aligned_cols=82 Identities=10% Similarity=0.178 Sum_probs=57.5
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------
Q 010178 49 VELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (516)
Q Consensus 49 ~~L~~~~f~~~l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (516)
..++++.+. +.+.++++++|.|| ++||++|+...|.++++++++. .+.++.|+++.
T Consensus 64 ~d~~G~~v~--L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~--------~v~vv~Is~D~~~~~~~~~~~~~~ 133 (200)
T 3zrd_A 64 VAKDLSDVA--LSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELE--------NTVVLCISSDLPFAQSRFCGAEGL 133 (200)
T ss_dssp ECTTSCEEE--GGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTST--------TEEEEEEESSCHHHHTTCTTTTTC
T ss_pred ECCCCCEEc--HHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHhC--------CCEEEEEECCCHHHHHHHHHHcCC
Confidence 334444433 44445789999999 7899999999999999999882 27777776642
Q ss_pred -------cc-cHHHHHhCCCC---------ccCeEEEe-cCCcc
Q 010178 115 -------KI-NTNLCDKFSVG---------HYPMLLWG-SPSKF 140 (516)
Q Consensus 115 -------d~-~~~l~~~~~I~---------~~PTl~~f-~~g~~ 140 (516)
|. +..+.+.|||. ..|+++++ ++|++
T Consensus 134 ~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I 177 (200)
T 3zrd_A 134 SNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNV 177 (200)
T ss_dssp TTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBE
T ss_pred CCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeE
Confidence 22 45677778875 25887776 45544
No 241
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.13 E-value=3.7e-06 Score=77.20 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=27.5
Q ss_pred CCCeEEEEEe-cCCChhhh-hhhHHHHHHHHHhCCC
Q 010178 64 PATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGP 97 (516)
Q Consensus 64 ~~k~vlV~Fy-A~WC~~C~-~~~P~~~~la~~~~~~ 97 (516)
++++++|.|| ++||++|+ .++|.|++++++|++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~ 77 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK 77 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 3566665554 99999999 5999999999999754
No 242
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.08 E-value=2.3e-06 Score=67.52 Aligned_cols=51 Identities=12% Similarity=0.190 Sum_probs=38.1
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHH---HHhCCCCccCeEEE
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL---CDKFSVGHYPMLLW 134 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l---~~~~~I~~~PTl~~ 134 (516)
++.|+++||++|+...+.++++ . +.+..+|++. ++++ ..++|+.++||+++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~----~---------i~~~~vdi~~--~~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR----G---------FDFEMINVDR--VPEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEETTT--CHHHHHHHHHTTCCSSCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHHHC----C---------CCeEEEECCC--CHHHHHHHHHhCCCccCEEEE
Confidence 6789999999999999988753 1 4566788743 3333 34699999999943
No 243
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.07 E-value=1.3e-05 Score=74.67 Aligned_cols=41 Identities=27% Similarity=0.607 Sum_probs=33.5
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
++++||+||+.|||||+++.|.++++.+.+.+ .+.|..++.
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-------~v~~~~~p~ 64 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-------DMYLRTEHV 64 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-------TEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-------CeEEEEecC
Confidence 57899999999999999999999999887652 366655543
No 244
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.05 E-value=1.1e-06 Score=73.08 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=44.5
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCCCcc
Q 010178 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGHY 129 (516)
Q Consensus 55 ~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I~~~ 129 (516)
.+++.+... .++.|+++|||+|++..|.+++++..+ +. +..+|++.+.+ ..+.+.+|+.++
T Consensus 4 ~~~~~i~~~----~v~~f~~~~C~~C~~~~~~L~~~~~~~--------~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~v 69 (105)
T 1kte_A 4 FVNSKIQPG----KVVVFIKPTCPFCRKTQELLSQLPFKE--------GL--LEFVDITATSDTNEIQDYLQQLTGARTV 69 (105)
T ss_dssp HHHHHCCTT----CEEEEECSSCHHHHHHHHHHHHSCBCT--------TS--EEEEEGGGSTTHHHHHHHHHHHHSCCCS
T ss_pred HHHhhcccC----CEEEEEcCCCHhHHHHHHHHHHcCCCC--------Cc--cEEEEccCCCCHHHHHHHHHHHhCCCCc
Confidence 345555432 267799999999999999998764332 12 44456543311 357888999999
Q ss_pred CeEEE
Q 010178 130 PMLLW 134 (516)
Q Consensus 130 PTl~~ 134 (516)
||+++
T Consensus 70 P~i~~ 74 (105)
T 1kte_A 70 PRVFI 74 (105)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 99844
No 245
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.03 E-value=1.2e-05 Score=62.13 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=38.6
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHH---hCCCCccCeEEE
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD---KFSVGHYPMLLW 134 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~---~~~I~~~PTl~~ 134 (516)
++.|+++||++|++..+.++++ . +.+..+|++ ++.++.. ++++.++|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----~---------i~~~~~di~--~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA----G---------LAYNTVDIS--LDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEETT--TCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc----C---------CCcEEEECC--CCHHHHHHHHHcCCCccCEEEE
Confidence 6789999999999999988754 1 445667764 3444444 899999999974
No 246
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.02 E-value=1.2e-05 Score=76.69 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=76.5
Q ss_pred Ccceec-CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 46 DHAVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
..++.| +.+++++.+... +.+||-||++| |....|+|.++|+.+. .+.|+... +.++|.+|
T Consensus 9 ~~~~~l~s~~~~~~~l~~~--~v~vVgff~~~---~~~~~~~f~~~A~~l~--------~~~F~~t~-----~~~v~~~~ 70 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAAT--EVAVIGFFQDL---EIPAVPILHSMVQKFP--------GVSFGIST-----DSEVLTHY 70 (227)
T ss_dssp CCCEECCSHHHHHHHHHTS--SEEEEEECSCS---CSTHHHHHHHHTTTCT--------TSEEEEEC-----CHHHHHHT
T ss_pred CCCeeeCCHHHHHHHHhcC--CeEEEEEecCC---CchhHHHHHHHHHhCC--------CceEEEEC-----CHHHHHHc
Confidence 334555 668999888753 78899999998 5679999999999883 26777654 57899999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhcc----ccCCHHHHHHHHHHhccc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE----DWQTADGLLTWINKQTSR 176 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~----G~~~~e~L~~~i~~~l~~ 176 (516)
+|.+ ||+++|+++. +....|. |.++.++|.+||.++..+
T Consensus 71 ~v~~-p~i~lfk~~~------------~~~~~~~~~~~g~~~~~~l~~fi~~~~~p 113 (227)
T 4f9z_D 71 NITG-NTICLFRLVD------------NEQLNLEDEDIESIDATKLSRFIEINSLH 113 (227)
T ss_dssp TCCS-SEEEEEETTT------------TEEEEECHHHHHTCCHHHHHHHHHHHCCC
T ss_pred CCCC-CeEEEEEecC------------cccccccccccCCCCHHHHHHHHHHhCCC
Confidence 9998 9999998531 1112355 579999999999988643
No 247
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.01 E-value=1.1e-05 Score=74.77 Aligned_cols=31 Identities=26% Similarity=0.694 Sum_probs=28.6
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhC
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~ 95 (516)
++++|++||.+|||+|+.+.|.+.++.+.+.
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALP 52 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCC
Confidence 5788999999999999999999999998874
No 248
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.00 E-value=1.3e-05 Score=72.96 Aligned_cols=61 Identities=11% Similarity=0.230 Sum_probs=44.0
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCh-hhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~-~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
.+...+++.+. +.+.+||++||+||++||+ .|....+.+.++.+.+.+.+ ..+.++.|.++
T Consensus 16 ~L~d~~G~~v~--l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~----~~v~~v~isvD 77 (170)
T 4hde_A 16 QFTNQDGKPFG--TKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEK----LDVQFVSFSVD 77 (170)
T ss_dssp EEECTTSCEEE--HHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred EEECCCCCEEe--HHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhccc----ccceeEeeecC
Confidence 34455555544 3333569999999999996 79999999999988886433 34777777664
No 249
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.98 E-value=4.9e-05 Score=65.75 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=74.0
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCC
Q 010178 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (516)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I 126 (516)
+..| +.++++..+... ++++|-|+++||++| .+.|.++|+.+. .+.|+.++ +.++..+|++
T Consensus 23 ~~~i~s~~e~e~fi~~~--~v~VVGfF~~~~~~~---~~~F~~~A~~~~--------d~~F~~t~-----~~~v~~~~~v 84 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAAT--EVAVIGFFQDLEIPA---VPILHSMVQKFP--------GVSFGIST-----DSEVLTHYNI 84 (124)
T ss_dssp CEECCSHHHHHHHHHTS--SEEEEEECSCTTSTH---HHHHHHHHHHCT--------TSEEEEEC-----CHHHHHHTTC
T ss_pred ceEcCCHHHHHHHHhcC--CCEEEEEECCCCChh---HHHHHHHHHhCC--------CceEEEEC-----hHHHHHHcCC
Confidence 3445 457788888653 788999999999998 789999999983 37888876 4779999999
Q ss_pred CccCeEEEecCCcccCCCCCCCccccchhhccc----cCCHHHHHHHHHHh
Q 010178 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQ 173 (516)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G----~~~~e~L~~~i~~~ 173 (516)
. .|++.+|+++. +....|.| ..+.+.|.+||..+
T Consensus 85 ~-~~~vvlfkkfd------------e~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 85 T-GNTICLFRLVD------------NEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp C-SSCEEEEETTT------------TEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred C-CCeEEEEEcCC------------CCceeecCcccCCCCHHHHHHHHHHh
Confidence 9 89999998641 12234665 68999999999865
No 250
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.96 E-value=3.5e-05 Score=73.58 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=34.0
Q ss_pred eEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 67 ~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
.+|+.||++||++|..+.|.+.+++++|.+. .+.++.|+++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~------~v~vi~IS~D 74 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR------NVKLIALSID 74 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT------TEEEEEEESS
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC------CCEEEEEcCC
Confidence 4566678999999999999999999999753 3788888765
No 251
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.95 E-value=6.8e-06 Score=71.67 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=45.0
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-H----HHHHhCCCC
Q 010178 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-T----NLCDKFSVG 127 (516)
Q Consensus 53 ~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-~----~l~~~~~I~ 127 (516)
.+.+++.+... + ++.|+++|||+|+...+.++++. +.+..+|++.+.+ . .+.+.+++.
T Consensus 17 ~~~~~~~i~~~--~--vvvf~~~~Cp~C~~~~~~L~~~~-------------i~~~~vdid~~~~~~~~~~~l~~~~g~~ 79 (130)
T 2cq9_A 17 VNQIQETISDN--C--VVIFSKTSCSYCTMAKKLFHDMN-------------VNYKVVELDLLEYGNQFQDALYKMTGER 79 (130)
T ss_dssp HHHHHHHHHHS--S--EEEEECSSCSHHHHHHHHHHHHT-------------CCCEEEETTTSTTHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHcCC--c--EEEEEcCCChHHHHHHHHHHHcC-------------CCcEEEECcCCcCcHHHHHHHHHHhCCC
Confidence 45566666653 3 44499999999999999998752 2234556543311 3 378889999
Q ss_pred ccCeEEE
Q 010178 128 HYPMLLW 134 (516)
Q Consensus 128 ~~PTl~~ 134 (516)
++|++++
T Consensus 80 ~vP~l~i 86 (130)
T 2cq9_A 80 TVPRIFV 86 (130)
T ss_dssp CSSEEEE
T ss_pred CcCEEEE
Confidence 9999954
No 252
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.95 E-value=1.1e-05 Score=76.83 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=60.5
Q ss_pred eEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--------------------------ccHHH
Q 010178 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNL 120 (516)
Q Consensus 67 ~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~~~~l 120 (516)
.+|+.||++||+.|..+.|.+.++++++.+. .+.++.|+++.. .+..+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~------~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~v 107 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL------NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESREL 107 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc------CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHH
Confidence 3455568999999999999999999999753 378888877521 13346
Q ss_pred HHhCCCC------------ccCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHh
Q 010178 121 CDKFSVG------------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (516)
Q Consensus 121 ~~~~~I~------------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~ 173 (516)
++.||+. .+|+++++. +|++... .+.....+++.++|+..|+..
T Consensus 108 a~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~---------~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 108 ANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT---------VLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp HHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHH
Confidence 6677773 367777763 4433210 000112357889998888764
No 253
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.94 E-value=4e-06 Score=71.24 Aligned_cols=57 Identities=21% Similarity=0.199 Sum_probs=41.1
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-----cHHHHHhCCCCccCeEEE
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----NTNLCDKFSVGHYPMLLW 134 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~-----~~~l~~~~~I~~~PTl~~ 134 (516)
.++.|+++|||+|++..+.++++...+ +. +..+|++.+. ...+.+.+|+.++|++++
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~--------~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR--------GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT--------TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc--------Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 478899999999999999887542211 11 6667775432 136888999999999854
No 254
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.92 E-value=2.2e-05 Score=75.47 Aligned_cols=42 Identities=10% Similarity=0.195 Sum_probs=35.8
Q ss_pred CeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 66 TYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 66 k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
+++||.|| ++||+.|..+.|.+.++++++.+. .+.++.|+++
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~------~v~vigIS~D 72 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR------GVKLIALSCD 72 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT------TEEEEEEESS
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc------CCEEEEEcCC
Confidence 38899998 999999999999999999998743 3778888765
No 255
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.89 E-value=1.3e-06 Score=82.09 Aligned_cols=42 Identities=24% Similarity=0.537 Sum_probs=36.6
Q ss_pred CCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEecc
Q 010178 65 ATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCA 113 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~ 113 (516)
++++||+||+.|||||+++.|.| +++++.+. +.|.|..++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-------~~v~~~~~~v~ 157 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-------EGVKMTKYHVN 157 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-------TTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCC-------CCCEEEEeccC
Confidence 46789999999999999999999 99888875 35889999975
No 256
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.89 E-value=7.9e-06 Score=72.88 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=46.9
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc-cH----HHHHhCCCC
Q 010178 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-NT----NLCDKFSVG 127 (516)
Q Consensus 53 ~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~-~~----~l~~~~~I~ 127 (516)
.+.+++.+.+. . ++.|+++|||+|+...+.++++. +.+..+|++.+. +. .+.+.+|+.
T Consensus 39 ~~~~~~~i~~~---~-Vvvf~~~~Cp~C~~~k~~L~~~~-------------i~~~~vdId~~~~~~~~~~~L~~~~g~~ 101 (146)
T 2ht9_A 39 VNQIQETISDN---C-VVIFSKTSCSYCTMAKKLFHDMN-------------VNYKVVELDLLEYGNQFQDALYKMTGER 101 (146)
T ss_dssp HHHHHHHHHHC---S-EEEEECTTCHHHHHHHHHHHHHT-------------CCCEEEEGGGCTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCC---C-EEEEECCCChhHHHHHHHHHHcC-------------CCeEEEECccCcCCHHHHHHHHHHhCCC
Confidence 45566677653 3 44499999999999999998763 223445654331 12 478899999
Q ss_pred ccCeEEEecCCcc
Q 010178 128 HYPMLLWGSPSKF 140 (516)
Q Consensus 128 ~~PTl~~f~~g~~ 140 (516)
++|++++ +|+.
T Consensus 102 tvP~ifi--~G~~ 112 (146)
T 2ht9_A 102 TVPRIFV--NGTF 112 (146)
T ss_dssp CSCEEEE--TTEE
T ss_pred CcCeEEE--CCEE
Confidence 9999954 4543
No 257
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.88 E-value=4.2e-05 Score=69.51 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=27.8
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHh
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLF 94 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~ 94 (516)
.++.+|++|+..+||+|+.+.|.+.++.+++
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 3467899999999999999999999988887
No 258
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.83 E-value=4.4e-05 Score=70.40 Aligned_cols=31 Identities=23% Similarity=0.488 Sum_probs=28.0
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhC
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~ 95 (516)
++++|++|+.+|||+|..+.|.+.++.+++.
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQA 55 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcC
Confidence 4678999999999999999999999988764
No 259
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.82 E-value=1.1e-05 Score=73.56 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=44.5
Q ss_pred CeEEEEEecCCChhhhhh-hHHHHHHHHHhCCCCCCCCCeEE-EEEEecccc-ccHHHHHhCCCC-ccC
Q 010178 66 TYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIIL-MTRVDCALK-INTNLCDKFSVG-HYP 130 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~-~P~~~~la~~~~~~~~~~~~~v~-~~~VDc~~d-~~~~l~~~~~I~-~~P 130 (516)
+++|+.||++||++|+.+ +|.+.++++++++.+ +. ++.|+.+.. .....++++++. .||
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g------~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG------VDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT------CSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC------CCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 467788999999999999 999999999986432 55 777776421 234567788874 677
No 260
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.81 E-value=3.9e-05 Score=68.43 Aligned_cols=83 Identities=18% Similarity=0.326 Sum_probs=60.2
Q ss_pred CCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec------------------c------------
Q 010178 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC------------------A------------ 113 (516)
Q Consensus 64 ~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc------------------~------------ 113 (516)
.++.+||.|+.++||+|+++.+.++++ . .+.+..++. +
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~ 80 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T--------DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMR 80 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C--------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C--------ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHh
Confidence 357889999999999999999988654 1 133332211 0
Q ss_pred --------------ccccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 114 --------------LKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 114 --------------~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
.+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|++...
T Consensus 81 ~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~----------------~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 81 KGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR----------------TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp HCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC----------------EEESCCCTTHHHHHHHHTSC
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE----------------EeeCCCCHHHHHHHHHHHHH
Confidence 123567889999999999987 4442 35688899999999987653
No 261
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.76 E-value=2.8e-05 Score=72.06 Aligned_cols=40 Identities=25% Similarity=0.535 Sum_probs=30.6
Q ss_pred CeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 66 TYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
+++||+||+.|||||+++.|.+ .++.+.+. +.+.|..++.
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~ 57 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLP-------QGSRMVKYHV 57 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCC-------TTCCEEEEEC
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCC-------CCCEEEEEec
Confidence 5689999999999999999987 67777664 2355555543
No 262
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.72 E-value=0.0002 Score=72.70 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=84.4
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHH---
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC--- 121 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~--- 121 (516)
.+.+.+++.+++........++..++.|+.+||++|..+.+.++++|+++.+. ..+.|+.+|++ ..+.++
T Consensus 225 ~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~-----~~~~f~~id~~--~~~~~~~~~ 297 (350)
T 1sji_A 225 RPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDN-----PDLSIVWIDPD--DFPLLVAYW 297 (350)
T ss_dssp CCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGC-----SSCCEEEECGG--GCHHHHHHH
T ss_pred ccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCC-----CceEEEEECch--hhHHHHHHH
Confidence 34577899999988765432143456699999999999999999999999731 25889999984 567778
Q ss_pred -HhCCCC-ccCeEEEecCCcccCCCCCCCccccchhh-c---cccCCHHHHHHHHHHhccc
Q 010178 122 -DKFSVG-HYPMLLWGSPSKFVAGSWEPNQEKKEIRA-L---EDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 122 -~~~~I~-~~PTl~~f~~g~~~~~~~~~~~~~~~v~~-~---~G~~~~e~L~~~i~~~l~~ 176 (516)
+.||+. ++|++.++...+. ..... + .|..+.+.|.+|+++.+..
T Consensus 298 ~~~~gi~~~~P~~~i~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 298 EKTFKIDLFKPQIGVVNVTDA-----------DSVWMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp HHHCCSCTTSCEEEEEESSSS-----------CEEESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred HhhcCCCccCCcEEEEecccc-----------cccccCCCcccccCCHHHHHHHHHHHhcC
Confidence 889998 5899999864211 01111 1 3578999999999988754
No 263
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.72 E-value=4.8e-05 Score=72.59 Aligned_cols=96 Identities=6% Similarity=0.107 Sum_probs=63.3
Q ss_pred HhcCCCCeEEEEEecCC-Chhhh-----hhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------
Q 010178 60 LRDTPATYAVVEFFANW-CPACR-----NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------- 114 (516)
Q Consensus 60 l~~~~~k~vlV~FyA~W-C~~C~-----~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------------- 114 (516)
+.+.+++++||.||++| ||+|. .+.|.|.++ +. .+.|+.|+.+.
T Consensus 43 Lsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--------gv~VvgIS~Ds~~~~~~f~~~~gl~~fplL 111 (224)
T 3keb_A 43 LESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--------HLKLIVITVDSPSSLARARHEHGLPNIALL 111 (224)
T ss_dssp GGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--------TSEEEEEESSCHHHHHHHHHHHCCTTCEEE
T ss_pred HHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--------CCEEEEEECCCHHHHHHHHHHcCCCCceEE
Confidence 34445688999999999 99999 888888776 32 25666676542
Q ss_pred -cc-cHHHHHhCCCCc---------cCeEEEec-CCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 115 -KI-NTNLCDKFSVGH---------YPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 115 -d~-~~~l~~~~~I~~---------~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|. +..+++.|||.. .|+++++. +|++... .....+.+..+.+++++.|.+..
T Consensus 112 sD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~--------~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 112 STLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYS--------ERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp ESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEE--------EECSBTTCCCCHHHHHHHHHHHH
T ss_pred EcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEE--------EecCCCCCCCCHHHHHHHHHHhh
Confidence 22 467888888864 68777764 5654321 11112345577888888876654
No 264
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.69 E-value=0.00012 Score=66.47 Aligned_cols=32 Identities=25% Similarity=0.695 Sum_probs=28.6
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCC
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNG 96 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~ 96 (516)
++++||+|+.-.||||+++.|.+.++.+++.+
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE 52 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC
Confidence 47789999999999999999999999888753
No 265
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.65 E-value=0.0002 Score=69.37 Aligned_cols=109 Identities=15% Similarity=0.203 Sum_probs=78.9
Q ss_pred cCcceecC-cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 45 VDHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 45 ~~~v~~L~-~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
.+.+..|+ .+.++..+... +.++|-|+++| |....+.|.++|..+. +.+.|+.+. +.+++.+
T Consensus 5 gP~v~~l~s~~~~~~~l~~~--~v~vvgff~~~---~~~~~~~f~~~A~~lr-------~~~~F~~~~-----~~~v~~~ 67 (252)
T 2h8l_A 5 SPASVPLRTEEEFKKFISDK--DASIVGFFDDS---FSEAHSEFLKAASNLR-------DNYRFAHTN-----VESLVNE 67 (252)
T ss_dssp -CCEEECCSHHHHHHHHTSS--SCEEEEEESCT---TSHHHHHHHHHHHHTT-------TTSCEEEEC-----CHHHHHH
T ss_pred CCCceeecCHHHHHHHhhcC--CeEEEEEECCC---CChHHHHHHHHHHhcc-------cCcEEEEEC-----hHHHHHH
Confidence 44577785 56667767653 56799999998 4557889999999996 346787765 4679999
Q ss_pred CCCCccCeEEEecCCcccCCCCCCCccccchhhc-cccCCHHHHHHHHHHhcccC
Q 010178 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL-EDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 124 ~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~-~G~~~~e~L~~~i~~~l~~~ 177 (516)
|++.+ |++++|++++..+. ..+....| .|..+.++|.+||..+.-+.
T Consensus 68 ~~~~~-p~i~~fk~~~~~~k------f~e~~~~y~~g~~~~~~l~~fi~~~~~Pl 115 (252)
T 2h8l_A 68 YDDNG-EGIILFRPSHLTNK------FEDKTVAYTEQKMTSGKIKKFIQENIFGI 115 (252)
T ss_dssp HCSSS-EEEEEECCGGGCCT------TSCSEEECCCSSCCHHHHHHHHHHHSSCS
T ss_pred hCCCC-CcEEEEcchhhccc------ccccccccCCCCcCHHHHHHHHHhcccCC
Confidence 99997 99999987532211 00122457 88899999999999886443
No 266
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.00011 Score=69.67 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=67.6
Q ss_pred HhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------------------
Q 010178 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (516)
Q Consensus 60 l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (516)
+.+.++|++|+.|| +.||+.|..+.+.+.+.+.+|.+. .+.++.|.++.
T Consensus 47 Lsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~------g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpl 120 (216)
T 3sbc_A 47 LDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ------GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPL 120 (216)
T ss_dssp GGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCE
T ss_pred hHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC------CceEEEeecCchhhHHHHHHHHHHhCCccCcccce
Confidence 44556789999999 999999999999999999999753 37888887753
Q ss_pred --cccHHHHHhCCCC------ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 115 --KINTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 115 --d~~~~l~~~~~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
|.+.++++.|||- .++.++++ ++|++.- ..+....-+|+.++++..|+.
T Consensus 121 lsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~---------~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 121 LADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH---------ITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp EECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEE---------EEEECTTBCCCHHHHHHHHHH
T ss_pred EeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEE---------EEEcCCCCCCCHHHHHHHHHH
Confidence 2345678888873 23444444 4444321 112222346899999887764
No 267
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.62 E-value=0.00036 Score=64.14 Aligned_cols=108 Identities=9% Similarity=0.132 Sum_probs=76.7
Q ss_pred cCcccHHHHHhcC------CCCeEEEEEecCCChhhhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccccccH---
Q 010178 51 LNATNFDAVLRDT------PATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINT--- 118 (516)
Q Consensus 51 L~~~~f~~~l~~~------~~k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~--- 118 (516)
.-..+|++.+... ..|+++|+++++||..|..|.-.. +++.+.++ .++.+...|.+.+++.
T Consensus 35 F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~-------~nfV~w~~dv~~~e~~~~~ 107 (178)
T 2ec4_A 35 FFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLS-------QNFITWAWDLTKDSNRARF 107 (178)
T ss_dssp CCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHH-------HTEEEEEEECCSHHHHHHH
T ss_pred eeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHH-------cCEEEEEEeCCCchhhhhh
Confidence 3456777777554 469999999999999999997433 34555554 2478889998755532
Q ss_pred ----------HHHH---hCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 119 ----------NLCD---KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 119 ----------~l~~---~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.++. .|++.+||++.++.+. ++ ..+.+..+.|..+++++++.+.+.+
T Consensus 108 ~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~---~~------~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 108 LTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGK---RS------SNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp HHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCC---SS------CCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcC---CC------ceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3444 4999999999997532 00 1144567899999999998886654
No 268
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.62 E-value=5.1e-05 Score=61.01 Aligned_cols=53 Identities=13% Similarity=0.429 Sum_probs=40.6
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC-CCCccCeEEE
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-SVGHYPMLLW 134 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~-~I~~~PTl~~ 134 (516)
++.|+++||++|+...+.+++.. +.+..+|++.+...++.+.+ ++.++|++++
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~-------------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKG-------------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHT-------------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC-------------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 67899999999999999887642 34556676422456788888 9999999854
No 269
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.57 E-value=3.6e-05 Score=65.81 Aligned_cols=67 Identities=10% Similarity=0.177 Sum_probs=46.4
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhhhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCCC
Q 010178 54 TNFDAVLRDTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVG 127 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~-~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I~ 127 (516)
+.+++.+... + ++.|+++|||+|++. .+.++++.. ..+.+..+|++.+.+ ..+.+.+|+.
T Consensus 16 ~~~~~~i~~~--~--Vvvf~~~~Cp~C~~alk~~L~~~~~----------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~ 81 (118)
T 3c1r_A 16 KHVKDLIAEN--E--IFVASKTYCPYCHAALNTLFEKLKV----------PRSKVLVLQLNDMKEGADIQAALYEINGQR 81 (118)
T ss_dssp HHHHHHHHHS--S--EEEEECSSCHHHHHHHHHHHTTSCC----------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHccC--c--EEEEEcCCCcCHHHHHHHHHHHcCC----------CCCCeEEEECccCCChHHHHHHHHHHhCCC
Confidence 4566666553 2 667999999999998 777765431 125667777754322 3588889999
Q ss_pred ccCeEEE
Q 010178 128 HYPMLLW 134 (516)
Q Consensus 128 ~~PTl~~ 134 (516)
++|++++
T Consensus 82 tvP~vfi 88 (118)
T 3c1r_A 82 TVPNIYI 88 (118)
T ss_dssp SSCEEEE
T ss_pred CcCEEEE
Confidence 9999844
No 270
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.51 E-value=0.00028 Score=72.26 Aligned_cols=102 Identities=10% Similarity=0.156 Sum_probs=77.2
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
+.+..++ .++++..+... ++.++|-||++||+ ...+.|.++|..+. +.+.|+.++ +..++.+|
T Consensus 125 ~~v~~i~~~~~~~~~~~~~-~~~~vv~ff~~~~~---~~~~~f~~~A~~~~-------~~~~F~~~~-----~~~~~~~~ 188 (367)
T 3us3_A 125 DPVELIEGERELQAFENIE-DEIKLIGYFKNKDS---EHYKAFKEAAEEFH-------PYIPFFATF-----DSKVAKKL 188 (367)
T ss_dssp CSEEECCSHHHHHHHHHCC-SSCEEEEECSCTTC---HHHHHHHHHHHHHT-------TTSCEEEEC-----CHHHHHHH
T ss_pred CCcEEcCCHHHHHHHhccC-CCcEEEEEECCCCc---hHHHHHHHHHHhhc-------CCcEEEEEC-----CHHHHHHc
Confidence 4566674 57888887622 26689999999866 56789999999996 347788876 35799999
Q ss_pred CCCccCeEEEecCCcccCCCCCCCccccchhhcccc-CCHHHHHHHHHHhccc
Q 010178 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-QTADGLLTWINKQTSR 176 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~-~~~e~L~~~i~~~l~~ 176 (516)
+|.+ |++++|+++. .....|.|. ++.++|.+||..+.-+
T Consensus 189 ~v~~-p~i~lf~~~~------------~~~~~y~g~~~~~~~l~~fi~~~~~p 228 (367)
T 3us3_A 189 TLKL-NEIDFYEAFM------------EEPVTIPDKPNSEEEIVNFVEEHRRS 228 (367)
T ss_dssp TCCT-TCEEEECTTC------------SSCEECSSSSCCHHHHHHHHHHTCSC
T ss_pred CCCC-CeEEEEcCCC------------CCCeecCCCCCCHHHHHHHHHHcCcc
Confidence 9996 9999998741 112457774 9999999999987643
No 271
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.47 E-value=0.00041 Score=67.06 Aligned_cols=109 Identities=14% Similarity=0.190 Sum_probs=79.1
Q ss_pred ccCcceecCc-ccHHHHHhc-CCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHH
Q 010178 44 EVDHAVELNA-TNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (516)
Q Consensus 44 ~~~~v~~L~~-~~f~~~l~~-~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (516)
..+.+..++. +++++.+.. . +.++|-|++++| ....+.|.++|+.+. +.+.|+... +.+++
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~--~v~vVgff~~~~---~~~~~~F~~~A~~lr-------~~~~F~~t~-----~~~v~ 66 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGD--DVVILGVFQGVG---DPGYLQYQDAANTLR-------EDYKFHHTF-----STEIA 66 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCS--SCEEEEECSCTT---CHHHHHHHHHHHHHT-------TTCCEEEEC-----CHHHH
T ss_pred CCCCceecCCHHHHHHHHhcCC--CeEEEEEEcCCC---chHHHHHHHHHHhhh-------cCcEEEEEC-----cHHHH
Confidence 3456777754 778887765 4 678999999985 568899999999996 347787765 46789
Q ss_pred HhCCCCccCeEEEecCCcccCCCCCCCccccchhhcc--ccCCHHHHHHHHHHhccc
Q 010178 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE--DWQTADGLLTWINKQTSR 176 (516)
Q Consensus 122 ~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~--G~~~~e~L~~~i~~~l~~ 176 (516)
.+|++.+ |++++|+++.+.+. . .+....|. |..+.++|.+||..+.-+
T Consensus 67 ~~~~v~~-p~ivlfk~~~~~~k-f-----de~~~~y~g~~~~~~~~l~~fi~~~~~P 116 (250)
T 3ec3_A 67 KFLKVSL-GKLVLMQPEKFQSK-Y-----EPRMHVMDVQGSTEASAIKDYVVKHALP 116 (250)
T ss_dssp HHHTCCS-SEEEEECCGGGCCT-T-----SCSCEEEECCTTSCHHHHHHHHHHHSSC
T ss_pred HHcCCCC-CeEEEEecchhhcc-c-----cccceeccCCCCCCHHHHHHHHHHcCCC
Confidence 9999998 99999987532210 0 01123466 478999999999987543
No 272
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.45 E-value=0.00019 Score=72.32 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=71.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010178 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (516)
Q Consensus 48 v~~L~~~~f~~~l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (516)
+...+++.+. +.+.+||++||+|| +.||+.|..+++.|.+. .. ..+.++.|+.+.
T Consensus 9 l~~~~G~~~~--Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~------~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 9 LLTDEGKTFT--HVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NF------EKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp EEETTSCEEE--GGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CC------TTEEEEEEESCCHHHHHHHHHHHT
T ss_pred EECCCcCEEe--HHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hh------CCCEEEEEeCCCHHHHHHHHHhhC
Confidence 3444444443 55566799999999 68999999998887541 11 237778887652
Q ss_pred -------cccHHHHHhCCCC----ccCeEEEe-cCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCCCC
Q 010178 115 -------KINTNLCDKFSVG----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYGL 180 (516)
Q Consensus 115 -------d~~~~l~~~~~I~----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~~l 180 (516)
|.+..+++.|||. .+|+.+++ ++|++.. ......-...++++++++++.......+
T Consensus 77 l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~----------~~~~v~~~~h~~~~l~~~~~~~~~~~~~ 144 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRK----------EWRRVKVEGHVQEVKEALDRLIEEDLSL 144 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEE----------EEESCCSTTHHHHHHHHHHHHHHHHTSC
T ss_pred CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEE----------EEeCCCccccHHHHHHHHhhhchhhhHH
Confidence 4566789999994 46776665 4554431 1111233456788888888765444333
No 273
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.43 E-value=8.8e-05 Score=59.85 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=49.0
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc-cc----HHHHHhCCCCccCeEEEecCCcccCC
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-IN----TNLCDKFSVGHYPMLLWGSPSKFVAG 143 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d-~~----~~l~~~~~I~~~PTl~~f~~g~~~~~ 143 (516)
++.|+++||++|++..+.++++.-. +..+.||-..+ ++ .++.+.+++.++|++++ +|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~-----------~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~---- 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVD-----------FEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK---- 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCC-----------CEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE----
T ss_pred EEEEECCCChHHHHHHHHHHHcCCC-----------cEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE----
Confidence 5779999999999999888875322 23333332111 22 56678899999999987 332
Q ss_pred CCCCCccccchhhccccCCHHHHHHHHH
Q 010178 144 SWEPNQEKKEIRALEDWQTADGLLTWIN 171 (516)
Q Consensus 144 ~~~~~~~~~~v~~~~G~~~~e~L~~~i~ 171 (516)
..++.+.+.|.++|+
T Consensus 77 -------------~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 -------------HVLGYNEEKLKELIR 91 (92)
T ss_dssp -------------EEESCCHHHHHHHHH
T ss_pred -------------EEeCCCHHHHHHHhc
Confidence 223458888888874
No 274
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.31 E-value=0.00023 Score=59.15 Aligned_cols=66 Identities=11% Similarity=0.139 Sum_probs=44.6
Q ss_pred ccHHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHH----HHHhC
Q 010178 54 TNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN----LCDKF 124 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~----l~~~~ 124 (516)
+.++..+... .+ +.|+. +|||+|++..+.++++. +.+..+|++. ++. +...+
T Consensus 8 ~~~~~~i~~~---~v-vvf~~g~~~~~~C~~C~~~~~~L~~~~-------------i~~~~vdi~~--~~~~~~~l~~~~ 68 (105)
T 2yan_A 8 ERLKVLTNKA---SV-MLFMKGNKQEAKCGFSKQILEILNSTG-------------VEYETFDILE--DEEVRQGLKAYS 68 (105)
T ss_dssp HHHHHHHTSS---SE-EEEESBCSSSBCTTHHHHHHHHHHHHT-------------CCCEEEEGGG--CHHHHHHHHHHH
T ss_pred HHHHHHhccC---CE-EEEEecCCCCCCCccHHHHHHHHHHCC-------------CCeEEEECCC--CHHHHHHHHHHH
Confidence 4456666543 34 44777 99999999999887652 3456777643 333 55668
Q ss_pred CCCccCeEEEecCCcc
Q 010178 125 SVGHYPMLLWGSPSKF 140 (516)
Q Consensus 125 ~I~~~PTl~~f~~g~~ 140 (516)
|+.++|++++ +|++
T Consensus 69 g~~~vP~v~i--~g~~ 82 (105)
T 2yan_A 69 NWPTYPQLYV--KGEL 82 (105)
T ss_dssp TCCSSCEEEE--TTEE
T ss_pred CCCCCCeEEE--CCEE
Confidence 9999999854 4543
No 275
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.31 E-value=0.00045 Score=65.58 Aligned_cols=98 Identities=9% Similarity=0.159 Sum_probs=67.3
Q ss_pred HhcCCCCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------------------
Q 010178 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (516)
Q Consensus 60 l~~~~~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (516)
+.+.+++++|+.|| +.||+.|..+...|.+++.+|.+. .+.++.|.++.
T Consensus 51 Lsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~------g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpl 124 (219)
T 3tue_A 51 LSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL------NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPI 124 (219)
T ss_dssp GGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCE
T ss_pred hHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC------CcEEEEeeCCchhhHHHHhhhhHHhcCcccccccc
Confidence 44456789999999 999999999999999999999864 37888888753
Q ss_pred --cccHHHHHhCCCC----ccC---eEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 115 --KINTNLCDKFSVG----HYP---MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 115 --d~~~~l~~~~~I~----~~P---Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
|.+.++++.|||- +++ |+++-++|++.. ..+....-+++.++++..|+.
T Consensus 125 lsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~---------~~~~~~~~gr~~~EvLr~l~a 182 (219)
T 3tue_A 125 LADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ---------ITVNDMPVGRSVEEVLRLLEA 182 (219)
T ss_dssp EECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEE---------EEEECTTCCCCHHHHHHHHHH
T ss_pred ccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE---------EEEecCCCCCCHHHHHHHHHH
Confidence 2355678888873 333 333334444321 111222346888998887764
No 276
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.30 E-value=0.00018 Score=57.31 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=39.0
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--ccHHHHHhCCC-----CccCeEEE
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSV-----GHYPMLLW 134 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~~~I-----~~~PTl~~ 134 (516)
.++.|+++|||+|++..+.++++.. .+.+..||...+ ...++.+.+|. .++|++++
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i-----------~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNI-----------AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTC-----------CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCC-----------CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 3788999999999999887765421 144555664321 11457777888 99999965
No 277
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.21 E-value=0.00047 Score=63.99 Aligned_cols=30 Identities=27% Similarity=0.697 Sum_probs=26.8
Q ss_pred CeEEEEEecCCChhhhhhhHHH---HHHHHHhC
Q 010178 66 TYAVVEFFANWCPACRNYKPQY---EKVARLFN 95 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~~P~~---~~la~~~~ 95 (516)
++.||+|+..|||||+++.|.+ .++.+.+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~ 54 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLP 54 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSC
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCC
Confidence 6689999999999999999986 68888875
No 278
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.20 E-value=0.00053 Score=56.75 Aligned_cols=72 Identities=8% Similarity=-0.009 Sum_probs=46.4
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc---ccHHHH----HhCCCCccCeEEEecCCcc
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---INTNLC----DKFSVGHYPMLLWGSPSKF 140 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d---~~~~l~----~~~~I~~~PTl~~f~~g~~ 140 (516)
.++.|+++|||+|++..+.++++.. .+-.+|++.+ +..++. +.+++.++|++++- .|
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~i-------------~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~-~~-- 86 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLGV-------------DFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIIN-DE-- 86 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTB-------------CEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEET-TT--
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCC-------------CcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEEC-CC--
Confidence 3677999999999999999887532 2333454321 122332 34799999999871 11
Q ss_pred cCCCCCCCccccchhhccccCCHHHHHHHH
Q 010178 141 VAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 141 ~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
.+.|+.+.+.|.++|
T Consensus 87 ---------------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 ---------------KAIVGFKEKEIRESL 101 (103)
T ss_dssp ---------------EEEESCCHHHHHHHT
T ss_pred ---------------EEEEcCCHHHHHHHh
Confidence 134567777777655
No 279
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.17 E-value=0.00018 Score=60.64 Aligned_cols=63 Identities=16% Similarity=0.292 Sum_probs=41.2
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--ccH----HHHHhCCCCc
Q 010178 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INT----NLCDKFSVGH 128 (516)
Q Consensus 55 ~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--~~~----~l~~~~~I~~ 128 (516)
.+++.+... + ++.|+++|||+|++..+.++++. +.+..+|++.+ ++. .+.+.+|+..
T Consensus 11 ~~~~~i~~~--~--v~vy~~~~Cp~C~~~~~~L~~~~-------------i~~~~~di~~~~~~~~~~~~~l~~~~g~~t 73 (113)
T 3rhb_A 11 SIRKTVTEN--T--VVIYSKTWCSYCTEVKTLFKRLG-------------VQPLVVELDQLGPQGPQLQKVLERLTGQHT 73 (113)
T ss_dssp HHHHHHHHS--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhcC--C--EEEEECCCChhHHHHHHHHHHcC-------------CCCeEEEeecCCCChHHHHHHHHHHhCCCC
Confidence 344555553 2 67799999999999999887642 22344555321 122 2555579999
Q ss_pred cCeEEE
Q 010178 129 YPMLLW 134 (516)
Q Consensus 129 ~PTl~~ 134 (516)
+|++++
T Consensus 74 vP~ifi 79 (113)
T 3rhb_A 74 VPNVFV 79 (113)
T ss_dssp SCEEEE
T ss_pred cCEEEE
Confidence 999954
No 280
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.14 E-value=0.00043 Score=54.12 Aligned_cols=53 Identities=11% Similarity=0.214 Sum_probs=38.2
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCCCCccCeEEE
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVGHYPMLLW 134 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~I~~~PTl~~ 134 (516)
++.|+++||++|+...+.+++. . +.+..+|++.+. ..++.+.+++.++|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----~---------i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK----G---------VSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH----T---------CCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHC----C---------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 6779999999999999888764 1 334556654321 234667889999999854
No 281
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.00 E-value=0.0036 Score=58.41 Aligned_cols=42 Identities=29% Similarity=0.517 Sum_probs=31.5
Q ss_pred CCeEEEEEecCCChhhhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEEe
Q 010178 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVD 111 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~-~~la~~~~~~~~~~~~~v~~~~VD 111 (516)
.++.||+|+...||+|+++.+.+ ..+.+.|-+. +.|.|...+
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~-----g~v~~~~~~ 71 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDK-----GDVKFSFVN 71 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-----TSEEEEEEE
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccC-----CeEEEEEEe
Confidence 46789999999999999999886 5666666421 356666554
No 282
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.99 E-value=0.00031 Score=61.01 Aligned_cols=68 Identities=10% Similarity=0.156 Sum_probs=45.5
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCChhhhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCC
Q 010178 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSV 126 (516)
Q Consensus 53 ~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~-~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I 126 (516)
.+.+++.+... + ++.|+.+|||+|++. .+.++++... .+.+..+|++.+.+ ..+.+.+|+
T Consensus 27 ~~~v~~~i~~~--~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----------~i~~~~vdvd~~~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 27 VAHVKDLIGQK--E--VFVAAKTYCPYCKATLSTLFQELNVP----------KSKALVLELDEMSNGSEIQDALEEISGQ 92 (129)
T ss_dssp HHHHHHHHHHS--S--EEEEECTTCHHHHHHHHHHHTTSCCC----------GGGEEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCC--C--EEEEECCCCCchHHHHHHHHHhcCcc----------CCCcEEEEccccCCHHHHHHHHHHHhCC
Confidence 45566666653 2 688999999999998 7777654311 13344555543332 457888999
Q ss_pred CccCeEEE
Q 010178 127 GHYPMLLW 134 (516)
Q Consensus 127 ~~~PTl~~ 134 (516)
..+|++++
T Consensus 93 ~tVP~vfi 100 (129)
T 3ctg_A 93 KTVPNVYI 100 (129)
T ss_dssp CSSCEEEE
T ss_pred CCCCEEEE
Confidence 99999754
No 283
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.96 E-value=0.0016 Score=53.01 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=49.9
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHH----HHh-CCCCccCeEEEecCCcccCC
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL----CDK-FSVGHYPMLLWGSPSKFVAG 143 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l----~~~-~~I~~~PTl~~f~~g~~~~~ 143 (516)
++.|..+|||+|++....+++. .|.+-.+|++. +++. .+. .|.+.+|++++ .+|.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~-------------gi~y~~idi~~--d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~--- 66 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN-------------RIAYDEVDIEH--NRAAAEFVGSVNGGNRTVPTVKF-ADGST--- 66 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT-------------TCCCEEEETTT--CHHHHHHHHHHSSSSSCSCEEEE-TTSCE---
T ss_pred EEEEcCCCCHhHHHHHHHHHhc-------------CCceEEEEcCC--CHHHHHHHHHHcCCCCEeCEEEE-eCCEE---
Confidence 7889999999999988776542 15566777743 3332 222 37899999876 33321
Q ss_pred CCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 144 SWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 144 ~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
-++.+.++|.++|.+..+
T Consensus 67 --------------l~~~~~~el~~~L~el~g 84 (92)
T 2lqo_A 67 --------------LTNPSADEVKAKLVKIAG 84 (92)
T ss_dssp --------------EESCCHHHHHHHHHHHHC
T ss_pred --------------EeCCCHHHHHHHHHHhcC
Confidence 123577888888888765
No 284
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.92 E-value=0.0088 Score=52.90 Aligned_cols=113 Identities=12% Similarity=0.175 Sum_probs=77.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecC-CChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHh
Q 010178 45 VDHAVELNATNFDAVLRDTPATYAVVEFFAN-WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (516)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~-WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (516)
-+.|.++|.++........ -++.+.++.. -=..=..+.+.++++|+.++ +++.|+.+|.+.+++..+...
T Consensus 13 ~PLV~e~t~en~~~~~~~~--~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fk-------gki~Fv~vd~~~~~~~~~l~~ 83 (147)
T 3bj5_A 13 LPLVIEFTEQTAPKIFGGE--IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFAFIDSDHTDNQRILEF 83 (147)
T ss_dssp --CEEECCTTTHHHHHSSS--CCEEEEEECCTTSSSHHHHHHHHHHHHHTTT-------TTCEEEEECTTCGGGHHHHHH
T ss_pred CCeeEEeccccHHHHhcCC--CceEEEEEecCCcHhHHHHHHHHHHHHHHcC-------CceEEEEEecchHhHHHHHHH
Confidence 4568899999987765442 3333333432 22334557899999999997 569999999754567778899
Q ss_pred CCCCc--cCeEEEecC-CcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccC
Q 010178 124 FSVGH--YPMLLWGSP-SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 124 ~~I~~--~PTl~~f~~-g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~ 177 (516)
||+.. .|++.++.. +.. .....-.+..+.+.|.+|+.+.+...
T Consensus 84 fGl~~~~~P~v~i~~~~~~~-----------~Ky~~~~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 84 FGLKKEECPAVRLITLEEEM-----------TKYKPESEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp TTCCGGGCSEEEEEECSSSC-----------EEECCSCCCCCHHHHHHHHHHHHTTC
T ss_pred cCCCcccCCEEEEEeccccc-----------ccCCCCcccCCHHHHHHHHHHHHcCC
Confidence 99996 899998753 210 11111136788999999999988654
No 285
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.90 E-value=0.00067 Score=54.50 Aligned_cols=53 Identities=13% Similarity=0.335 Sum_probs=37.8
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCCCCccCeEEE
Q 010178 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVGHYPMLLW 134 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~I~~~PTl~~ 134 (516)
++.|+++||++|++..+.+++. . +.+..+|++.+. ..++.+.+++.++|++++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~----~---------i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~ 62 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK----G---------AEFNEIDASATPELRAEMQERSGRNTFPQIFI 62 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEESTTSHHHHHHHHHHHTSSCCCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc----C---------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 7889999999999999888753 1 345566764321 134556889999998643
No 286
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.90 E-value=0.0013 Score=55.60 Aligned_cols=64 Identities=13% Similarity=0.242 Sum_probs=43.6
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCCCc
Q 010178 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I~~ 128 (516)
+.+++.+... + ++.|+.+|||+|++..+.++++. +.+..+|++...+ ..+.+..|...
T Consensus 8 ~~~~~~i~~~--~--v~vy~~~~Cp~C~~ak~~L~~~~-------------i~~~~~dvd~~~~~~~~~~~l~~~~g~~t 70 (114)
T 3h8q_A 8 RHLVGLIERS--R--VVIFSKSYCPHSTRVKELFSSLG-------------VECNVLELDQVDDGARVQEVLSEITNQKT 70 (114)
T ss_dssp HHHHHHHHHC--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEETTTSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhccC--C--EEEEEcCCCCcHHHHHHHHHHcC-------------CCcEEEEecCCCChHHHHHHHHHHhCCCc
Confidence 4566677653 3 55699999999999998887641 2344555543222 23556778999
Q ss_pred cCeEEE
Q 010178 129 YPMLLW 134 (516)
Q Consensus 129 ~PTl~~ 134 (516)
+|++++
T Consensus 71 vP~vfi 76 (114)
T 3h8q_A 71 VPNIFV 76 (114)
T ss_dssp SCEEEE
T ss_pred cCEEEE
Confidence 999976
No 287
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.83 E-value=0.00083 Score=55.38 Aligned_cols=54 Identities=7% Similarity=0.124 Sum_probs=37.5
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc--HHHHHhC-CCCccCeEEE
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDKF-SVGHYPMLLW 134 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~--~~l~~~~-~I~~~PTl~~ 134 (516)
-++.|+++|||+|++..+.++++. +.+..+|++.+.. ..+.+.. |...+|++++
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~~~-------------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKRKG-------------VEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHT-------------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CEEEEEcCCChhHHHHHHHHHHCC-------------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 478899999999999999888652 3345566643211 2234445 9999999854
No 288
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.68 E-value=0.0097 Score=56.58 Aligned_cols=41 Identities=17% Similarity=0.309 Sum_probs=30.7
Q ss_pred CCeEEEEEecCCChhhhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEE
Q 010178 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRV 110 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~-~~la~~~~~~~~~~~~~v~~~~V 110 (516)
.+..||+|+...||+|+++.|.. .++.++|-+. +.|.+...
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~-----g~V~~v~~ 80 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYIDT-----GKMLYIFR 80 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTT-----TSEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccC-----CeEEEEEE
Confidence 46689999999999999999964 7787777421 34665544
No 289
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.46 E-value=0.0047 Score=56.49 Aligned_cols=64 Identities=11% Similarity=0.149 Sum_probs=42.7
Q ss_pred cHHHHHhcCCCCe-EEEEEecCCChhhhh-hhHHHHHHHHHhCCCCCCCCCeE-EEEEEeccc-cccHHHHHhCCCC
Q 010178 55 NFDAVLRDTPATY-AVVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVG 127 (516)
Q Consensus 55 ~f~~~l~~~~~k~-vlV~FyA~WC~~C~~-~~P~~~~la~~~~~~~~~~~~~v-~~~~VDc~~-d~~~~l~~~~~I~ 127 (516)
++.+.+. +++ +|+.|++.|||.|.. +.|.|.+.+.+++..+ + .++.|.++. ......+++.++.
T Consensus 40 sLsd~~~---Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g------~d~VigIS~D~~~~~~~f~~~~~l~ 107 (176)
T 4f82_A 40 SVRDQVA---GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG------IDEIWCVSVNDAFVMGAWGRDLHTA 107 (176)
T ss_dssp EHHHHHT---TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT------CCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred eHHHHhC---CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC------CCEEEEEeCCCHHHHHHHHHHhCCC
Confidence 3444443 354 566777999999999 9999999999997533 5 566666542 1234455666654
No 290
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.39 E-value=0.013 Score=60.05 Aligned_cols=111 Identities=11% Similarity=0.063 Sum_probs=77.1
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh-hhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~-~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~ 124 (516)
+.+.+++.+++...... +.+++|.|+.++|. .++.+...+.+++..++ +.+.|+.+|++ +...++..|
T Consensus 219 p~v~elt~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~f~~id~~--~~~~~~~~~ 287 (382)
T 2r2j_A 219 PLVREITFENGEELTEE--GLPFLILFHMKEDTESLEIFQNEVARQLISEK-------GTINFLHADCD--KFRHPLLHI 287 (382)
T ss_dssp CSSEECCHHHHHHHHTT--CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGT-------TTSEEEEEETT--TTHHHHHHT
T ss_pred CceEecChhhHHHHhcC--CCcEEEEEecCCchHHHHHHHHHHHHHHHHhC-------CeeEEEEEchH--HhHHHHHHc
Confidence 35678888888876544 36788999999973 45555555666555554 46999999984 577889999
Q ss_pred CCC--ccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcccCC
Q 010178 125 SVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (516)
Q Consensus 125 ~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~~~ 178 (516)
|+. .+|.+.++..++. -....+.+..+.+.|.+|+++.+...+
T Consensus 288 gl~~~~~P~i~i~~~~~~-----------y~~~~~~~~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 288 QKTPADCPVIAIDSFRHM-----------YVFGDFKDVLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp TCCGGGCSEEEEECSSCE-----------EECCCSGGGGSTTHHHHHHHHHHHTTT
T ss_pred CCCccCCCEEEEEcchhc-----------CCCCccccccCHHHHHHHHHHHHCCCc
Confidence 997 6899988754321 001112345577899999998876543
No 291
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.39 E-value=0.0043 Score=51.80 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=43.0
Q ss_pred cccHHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc--HHHHHhCC
Q 010178 53 ATNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDKFS 125 (516)
Q Consensus 53 ~~~f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~--~~l~~~~~ 125 (516)
.+.+++.+... + ++.|+. +|||+|++..+.++++ . +.+..+|++.+.. ..+....|
T Consensus 5 ~~~~~~~i~~~--~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~----~---------i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 5 SSGLKVLTNKA--S--VMLFMKGNKQEAKCGFSKQILEILNST----G---------VEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp CCCHHHHHTTS--S--EEEEESSTTTCCCSSTHHHHHHHHHHT----C---------SCEEEEESSSCHHHHHHHHHHHS
T ss_pred HHHHHHHhccC--C--EEEEEecCCCCCCCchHHHHHHHHHHc----C---------CCeEEEECCCCHHHHHHHHHHhC
Confidence 35577777653 3 455777 9999999999888653 1 4567777753211 23555678
Q ss_pred CCccCeEE
Q 010178 126 VGHYPMLL 133 (516)
Q Consensus 126 I~~~PTl~ 133 (516)
...+|+++
T Consensus 68 ~~~vP~if 75 (109)
T 1wik_A 68 WPTYPQLY 75 (109)
T ss_dssp CCSSCEEE
T ss_pred CCCCCEEE
Confidence 89999864
No 292
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.20 E-value=0.0021 Score=59.10 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=28.0
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHh
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLF 94 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~ 94 (516)
++++||+|++.|||||+++.|.++++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 367899999999999999999999999988
No 293
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=94.68 E-value=0.1 Score=50.00 Aligned_cols=109 Identities=11% Similarity=0.186 Sum_probs=73.6
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh---hh-hhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHH
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP---AC-RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~---~C-~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (516)
+.|.++|.+++... .+ .+++|.|+..-+. .+ ..+...+.++|+.+++.+ ..+.|+.+|++ ....+.
T Consensus 114 Plv~e~t~~n~~~~-~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~----~~~~F~~~d~~--~~~~~~ 183 (252)
T 2h8l_A 114 GICPHMTEDNKDLI-QG---KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG----HKLNFAVASRK--TFSHEL 183 (252)
T ss_dssp CSSCEECTTTHHHH-SS---SSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTT----CCCEEEEEETT--TTHHHH
T ss_pred CCeeecccccHhhh-cC---CCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccC----ceEEEEEEchH--HHHHHH
Confidence 45778888888775 32 3456667654321 11 247788889999997422 34999999974 567789
Q ss_pred HhCCC----CccCeEEEecCCcccCCCCCCCccccchhhccccCCHHH--HHHHHHHhcccC
Q 010178 122 DKFSV----GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADG--LLTWINKQTSRS 177 (516)
Q Consensus 122 ~~~~I----~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~--L~~~i~~~l~~~ 177 (516)
..||+ ..+|.+.++... + .. ..+.+..+.+. |.+|+++.+...
T Consensus 184 ~~fgl~~~~~~~P~v~i~~~~----~--------~k-y~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 184 SDFGLESTAGEIPVVAIRTAK----G--------EK-FVMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp GGGTCCCCSCSSCEEEEECTT----S--------CE-EECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred HHcCCCCccCCCCEEEEEeCc----C--------cE-ecCCcccCcchHHHHHHHHHHHCCC
Confidence 99999 369999987431 0 11 12345677788 999999987543
No 294
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.02 Score=49.38 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=42.5
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCCCc
Q 010178 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I~~ 128 (516)
++|++++... . ++.|..+|||+|++....+++... +. +.+..+|++.+.+ ..+.+..|.+.
T Consensus 5 ~~~~~ii~~~---~-Vvvysk~~Cp~C~~ak~lL~~~~~-~~---------v~~~~idid~~~d~~~~~~~l~~~~G~~t 70 (127)
T 3l4n_A 5 KEYSLILDLS---P-IIIFSKSTCSYSKGMKELLENEYQ-FI---------PNYYIIELDKHGHGEELQEYIKLVTGRGT 70 (127)
T ss_dssp HHHHHHHTSC---S-EEEEECTTCHHHHHHHHHHHHHEE-EE---------SCCEEEEGGGSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHccC---C-EEEEEcCCCccHHHHHHHHHHhcc-cC---------CCcEEEEecCCCCHHHHHHHHHHHcCCCC
Confidence 4677777653 2 788999999999999987776310 11 2234444433322 12334468899
Q ss_pred cCeEEE
Q 010178 129 YPMLLW 134 (516)
Q Consensus 129 ~PTl~~ 134 (516)
+|++++
T Consensus 71 VP~IfI 76 (127)
T 3l4n_A 71 VPNLLV 76 (127)
T ss_dssp SCEEEE
T ss_pred cceEEE
Confidence 999976
No 295
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.54 E-value=0.12 Score=50.28 Aligned_cols=81 Identities=9% Similarity=0.094 Sum_probs=54.4
Q ss_pred eEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc----------------ccccHHHHHhCCCCcc-
Q 010178 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA----------------LKINTNLCDKFSVGHY- 129 (516)
Q Consensus 67 ~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~----------------~d~~~~l~~~~~I~~~- 129 (516)
..+..|..++|++|......+++++.++. +....++.+ .+....+.+++|++++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~---------vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVy 114 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD---------VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVY 114 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS---------SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCC
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC---------eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCccc
Confidence 46777899999999999999999987753 322222221 1123457889999988
Q ss_pred -CeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 130 -PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 130 -PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
|.+++ +|+ ...++.+.+.|.+.|.+..
T Consensus 115 TPqI~I--ng~----------------~~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 115 TPQAIL--NGR----------------DHVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp SSEEEE--TTT----------------EEEETTCHHHHHHHHHHHH
T ss_pred CCEEEE--CCE----------------EeecCCCHHHHHHHHHHhh
Confidence 99887 221 1223456788888887654
No 296
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.02 E-value=0.16 Score=50.09 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=68.4
Q ss_pred cCcceec-CcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHH--
Q 010178 45 VDHAVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC-- 121 (516)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~-- 121 (516)
.+.+..+ +.++++..+... +++++|.| .. .....+.|+++|..+. +.+.|+.++-. +...+.
T Consensus 142 ~~~v~~i~~~~~l~~~l~~~-~~~~vi~f-s~----~~~~~~~f~~~A~~~~-------~~~~F~~v~~~--~~a~~~~~ 206 (298)
T 3ed3_A 142 RSYVKKFVRIDTLGSLLRKS-PKLSVVLF-SK----QDKISPVYKSIALDWL-------GKFDFYSISNK--KLKQLTDM 206 (298)
T ss_dssp CCCEEECSCGGGHHHHHTSC-SSEEEEEE-ES----SSSCCHHHHHHHHHTB-------TTEEEEEEEGG--GCCCCCTT
T ss_pred ccccEEcCCHHHHHHHHhcC-CceEEEEE-cC----CCcchHHHHHHHHHhh-------cCcEEEEEcch--Hhhhhhhh
Confidence 3456666 457788888765 46666666 33 2345689999999997 46899999832 111111
Q ss_pred HhCC-----C-------------CccCeEEEecCCcccCCCCCCCccccchhhccc-cCCHHHHHHHHHHhcc
Q 010178 122 DKFS-----V-------------GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTS 175 (516)
Q Consensus 122 ~~~~-----I-------------~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~e~L~~~i~~~l~ 175 (516)
.+|+ | ...|++++|++.. .....|.| ..+.++|.+||.+...
T Consensus 207 ~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~------------~~~~~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 207 NPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADK------------DKFWEYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp CTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTT------------TEEEECCCSSCCHHHHHHHHHHHHT
T ss_pred hhhcccCcchhhhhhcccccccccCCCeEEEEcCCC------------CceEEeccccCCHHHHHHHHHhhcC
Confidence 2333 2 6799999997521 23355674 6899999999997654
No 297
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=93.95 E-value=0.3 Score=46.16 Aligned_cols=77 Identities=16% Similarity=0.100 Sum_probs=52.7
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
+++...+.++++..+.....+++.+.|...-|. ...+++..+... ..+.+..++ +.+..++++||
T Consensus 138 p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~~-------~~~~~~~d~~~~-----~~i~v~~~~---~~~~~l~~~f~ 202 (244)
T 3q6o_A 138 PPLEPAXLEEIDGFFARNNEEYLALIFEXGGSY-------LAREVALDLSQH-----KGVAVRRVL---NTEANVVRKFG 202 (244)
T ss_dssp CCCSCCCHHHHHTHHHHCCCSEEEEEEECTTCC-------HHHHHHHHTTTC-----TTEEEEEEE---TTCHHHHHHHT
T ss_pred CCcccccHHHHHHHhhcCCCceEEEEEEECCcc-------hHHHHHHHhccC-----CceEEEEEe---CchHHHHHHcC
Confidence 344556677788777666567777777776543 344455555533 247777766 45689999999
Q ss_pred CCccCeEEEecC
Q 010178 126 VGHYPMLLWGSP 137 (516)
Q Consensus 126 I~~~PTl~~f~~ 137 (516)
|+++||+++|.+
T Consensus 203 v~~~Pslvl~~~ 214 (244)
T 3q6o_A 203 VTDFPSCYLLFR 214 (244)
T ss_dssp CCCSSEEEEEET
T ss_pred CCCCCeEEEEeC
Confidence 999999988754
No 298
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=93.68 E-value=0.1 Score=47.67 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=41.9
Q ss_pred CCeEEEEEe-cCCChhhh-hhhHHHHHHHHHh-CCCCCCCCCeE-EEEEEecccc-ccHHHHHhCCCCccC
Q 010178 65 ATYAVVEFF-ANWCPACR-NYKPQYEKVARLF-NGPNAAHPGII-LMTRVDCALK-INTNLCDKFSVGHYP 130 (516)
Q Consensus 65 ~k~vlV~Fy-A~WC~~C~-~~~P~~~~la~~~-~~~~~~~~~~v-~~~~VDc~~d-~~~~l~~~~~I~~~P 130 (516)
+++++|.|| +.|||.|. ...+.|.+.+.++ +..+ + .++.|.++.. .....++++++..||
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g------~~~V~gvS~D~~~~~~~~~~~~~~~~f~ 107 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN------FDDIYCITNNDIYVLKSWFKSMDIKKIK 107 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC------CSEEEEEESSCHHHHHHHHHHTTCCSSE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC------CcEEEEEeCCCHHHHHHHHHHcCCCCce
Confidence 477777777 78999999 8999999999999 7533 4 3666665321 234566677765344
No 299
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.44 E-value=0.091 Score=51.17 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=25.0
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHH
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARL 93 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~ 93 (516)
++.+++.|+-+.||+|+++.+.+++..+.
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 46789999999999999999999865554
No 300
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=92.68 E-value=0.039 Score=48.01 Aligned_cols=65 Identities=9% Similarity=0.036 Sum_probs=39.9
Q ss_pred ccHHHHHhcCCCCeEEEEEec----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCCCC
Q 010178 54 TNFDAVLRDTPATYAVVEFFA----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVG 127 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~I~ 127 (516)
+.+++.+... .++|+.++ +|||+|++....++++ . +.+..+|++.+. -..+.+..|..
T Consensus 26 ~~v~~~i~~~---~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~----g---------v~y~~vdI~~d~~~~~~L~~~~G~~ 89 (135)
T 2wci_A 26 EKIQRQIAEN---PILLYMKGSPKLPSCGFSAQAVQALAAC----G---------ERFAYVDILQNPDIRAELPKYANWP 89 (135)
T ss_dssp HHHHHHHHHC---SEEEEESBCSSSBSSHHHHHHHHHHHTT----C---------SCCEEEEGGGCHHHHHHHHHHHTCC
T ss_pred HHHHHHhccC---CEEEEEEecCCCCCCccHHHHHHHHHHc----C---------CceEEEECCCCHHHHHHHHHHHCCC
Confidence 4455666653 34454444 8999999988777643 1 445667764321 12344456888
Q ss_pred ccCeEEE
Q 010178 128 HYPMLLW 134 (516)
Q Consensus 128 ~~PTl~~ 134 (516)
.+|.+++
T Consensus 90 tvP~VfI 96 (135)
T 2wci_A 90 TFPQLWV 96 (135)
T ss_dssp SSCEEEE
T ss_pred CcCEEEE
Confidence 9998865
No 301
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.32 E-value=0.054 Score=42.77 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=35.5
Q ss_pred EEEEecC----CChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc-----cc--ccHHHHHhCCCC-----ccCeE
Q 010178 69 VVEFFAN----WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA-----LK--INTNLCDKFSVG-----HYPML 132 (516)
Q Consensus 69 lV~FyA~----WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~-----~d--~~~~l~~~~~I~-----~~PTl 132 (516)
++.|+.+ |||+|++....+++. . +.+-.+|++ .+ ...++.+..|.. .+|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~----g---------i~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v 68 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK----K---------QPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQV 68 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT----T---------CCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc----C---------CCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEE
Confidence 4668899 999999988777652 1 345556654 21 113466677888 89998
Q ss_pred EE
Q 010178 133 LW 134 (516)
Q Consensus 133 ~~ 134 (516)
++
T Consensus 69 ~i 70 (87)
T 1aba_A 69 FA 70 (87)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 302
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=92.25 E-value=0.14 Score=46.38 Aligned_cols=41 Identities=22% Similarity=0.443 Sum_probs=32.6
Q ss_pred CCeEEEEEecCCChhhhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~-~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
.++++|+||..+||+|..+.+.+ .++.+.+. +.|.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~-------~~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVK-------DIVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTT-------TTCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCC-------CceEEEEEec
Confidence 35679999999999999999999 99988874 2356655554
No 303
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=92.01 E-value=0.25 Score=52.71 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=56.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCC
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~ 125 (516)
+++..++.++++..+.....++++|.|...- .+...+++..+... ..+.+..++ +.+.+++++||
T Consensus 138 p~l~~it~~~l~~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~-----~~v~v~~v~---~~~~~l~~kfg 202 (519)
T 3t58_A 138 PPLEPAKLNDIDGFFTRNKADYLALVFERED-------SYLGREVTLDLSQY-----HAVAVRRVL---NTESDLVNKFG 202 (519)
T ss_dssp CCCSBCCHHHHTTGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTC-----TTEEEEEEE---TTCHHHHHHHT
T ss_pred CccCcCCHHHHHHHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhcc-----CCeeEEEec---CchHHHHHHcC
Confidence 3456667788887777766778888888653 34567777777643 247776665 45689999999
Q ss_pred CCccCeEEEecCC
Q 010178 126 VGHYPMLLWGSPS 138 (516)
Q Consensus 126 I~~~PTl~~f~~g 138 (516)
|+.+||+++|.++
T Consensus 203 V~~~Pslvl~~~n 215 (519)
T 3t58_A 203 VTDFPSCYLLLRN 215 (519)
T ss_dssp CCCSSEEEEEETT
T ss_pred CCCCCeEEEEeCC
Confidence 9999999998643
No 304
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=91.90 E-value=0.23 Score=46.93 Aligned_cols=54 Identities=11% Similarity=0.167 Sum_probs=39.3
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-HHHHHhCCCCccCeEEE
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-TNLCDKFSVGHYPMLLW 134 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-~~l~~~~~I~~~PTl~~ 134 (516)
.++.|..+||+.|++....+++.. +.+-.+|++.+.. .++.+.+|..++|++++
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~~~-------------i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHDKG-------------LSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT-------------CCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-------------CceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 477889999999999988877531 3344566643332 55777899999999865
No 305
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=91.63 E-value=0.15 Score=35.09 Aligned_cols=29 Identities=31% Similarity=0.259 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHH-HHHhhhcC
Q 010178 482 VGAALAIALASCAFGALACYW-RSQQKNRK 510 (516)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 510 (516)
++++++|+++-.+-+.+++|+ |.+||+||
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~~~~kK 44 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQQKIRK 44 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhheehhhhhccC
Confidence 455666655555555556676 55566554
No 306
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=91.21 E-value=0.12 Score=43.06 Aligned_cols=62 Identities=18% Similarity=0.165 Sum_probs=39.1
Q ss_pred HHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc--HHHHHhCCCCc
Q 010178 56 FDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDKFSVGH 128 (516)
Q Consensus 56 f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~--~~l~~~~~I~~ 128 (516)
+++.+.++ + +|.|.. +|||+|++....+++. . +.+..+|++.+.. ..+.+..|...
T Consensus 9 v~~~i~~~---~-Vvlf~kg~~~~~~Cp~C~~ak~~L~~~----g---------i~y~~~di~~d~~~~~~l~~~~g~~t 71 (111)
T 3zyw_A 9 LKKLTHAA---P-CMLFMKGTPQEPRCGFSKQMVEILHKH----N---------IQFSSFDIFSDEEVRQGLKAYSSWPT 71 (111)
T ss_dssp HHHHHTSS---S-EEEEESBCSSSBSSHHHHHHHHHHHHT----T---------CCCEEEEGGGCHHHHHHHHHHHTCCS
T ss_pred HHHHHhcC---C-EEEEEecCCCCCcchhHHHHHHHHHHc----C---------CCeEEEECcCCHHHHHHHHHHHCCCC
Confidence 44555553 3 677888 9999999998777643 1 3455567643211 22333447889
Q ss_pred cCeEEE
Q 010178 129 YPMLLW 134 (516)
Q Consensus 129 ~PTl~~ 134 (516)
+|.+++
T Consensus 72 vP~ifi 77 (111)
T 3zyw_A 72 YPQLYV 77 (111)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 999866
No 307
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.17 E-value=0.21 Score=42.28 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=38.9
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccc--ccHHHHHhCCCC
Q 010178 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVG 127 (516)
Q Consensus 55 ~f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~~~I~ 127 (516)
-+++.+..+ + +|.|.. ||||+|++....+++..-.+ . .+..+|...+ ....+.+..|..
T Consensus 8 ~v~~~i~~~--~--Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~--------~--~~~~~dv~~~~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 8 AIEDAIESA--P--VVLFMKGTPEFPKCGFSRATIGLLGNQGVDP--------A--KFAAYNVLEDPELREGIKEFSEWP 73 (121)
T ss_dssp HHHHHHHSC--S--EEEEESBCSSSBCTTHHHHHHHHHHHHTBCG--------G--GEEEEECTTCHHHHHHHHHHHTCC
T ss_pred HHHHHhccC--C--EEEEEeccCCCCCCccHHHHHHHHHHcCCCc--------c--eEEEEEecCCHHHHHHHHHHhCCC
Confidence 345566653 2 455655 49999999988887652111 0 1445555322 112344455888
Q ss_pred ccCeEEE
Q 010178 128 HYPMLLW 134 (516)
Q Consensus 128 ~~PTl~~ 134 (516)
.+|.+++
T Consensus 74 tvP~vfI 80 (121)
T 3gx8_A 74 TIPQLYV 80 (121)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 9999866
No 308
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=90.45 E-value=1.4 Score=41.72 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=70.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEec-CCC---hh-hhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHH
Q 010178 46 DHAVELNATNFDAVLRDTPATYAVVEFFA-NWC---PA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL 120 (516)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~k~vlV~FyA-~WC---~~-C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l 120 (516)
+.+.+++.+++.... . +++.++.|+. +.. .. ...+...++++|++++ .+.|+.+|. ++....
T Consensus 116 Plv~e~t~~n~~~~~-~--~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--------ki~F~~~d~--~~~~~~ 182 (250)
T 3ec3_A 116 PLVGHRKTSNDAKRY-S--KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--------EYTFAIADE--EDYATE 182 (250)
T ss_dssp CTEEEECTTTHHHHS-C--SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--------TSEEEEEET--TTTHHH
T ss_pred CceeecCccchhhhh-c--cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--------ceeEEEEcH--HHHHHH
Confidence 456778888887655 2 3566666664 333 33 3457888899999875 288999997 456778
Q ss_pred HHhCCCCc--cC-eEEEecCCcccCCCCCCCccccchhhcc-ccCCHHHHHHHHHHhcccC
Q 010178 121 CDKFSVGH--YP-MLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINKQTSRS 177 (516)
Q Consensus 121 ~~~~~I~~--~P-Tl~~f~~g~~~~~~~~~~~~~~~v~~~~-G~~~~e~L~~~i~~~l~~~ 177 (516)
.+.||+.. +| .++++... + .. ..+. +..+.+.|.+|+++.+...
T Consensus 183 l~~fgl~~~~~~p~~~~~~~~----~--------~k-y~~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 183 VKDLGLSESGGDVNAAILDES----G--------KK-FAMEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp HHHTTCSSCSCSCEEEEECTT----S--------CE-EECCCCSCCHHHHHHHHHHHHTTC
T ss_pred HHHcCCCccCCCcEEEEEcCC----C--------ce-ecCCcccCCHHHHHHHHHHHHCCC
Confidence 88999974 55 55554321 0 11 1122 5689999999999987654
No 309
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.15 E-value=0.36 Score=40.04 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=33.8
Q ss_pred EEEEecCCChhhh------hhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc--HHHHHhC--------CCCccCeE
Q 010178 69 VVEFFANWCPACR------NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDKF--------SVGHYPML 132 (516)
Q Consensus 69 lV~FyA~WC~~C~------~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~--~~l~~~~--------~I~~~PTl 132 (516)
++.|+.++|+.|+ +....+++ . .|.+..+|++.+.. ..+...+ |...+|.+
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~----~---------gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~v 76 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA----N---------KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI 76 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T---------TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEE
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH----c---------CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEE
Confidence 6788999999999 44444432 2 15677788753311 2244454 77889988
Q ss_pred EE
Q 010178 133 LW 134 (516)
Q Consensus 133 ~~ 134 (516)
++
T Consensus 77 fi 78 (111)
T 2ct6_A 77 FN 78 (111)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 310
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=89.74 E-value=0.2 Score=41.48 Aligned_cols=63 Identities=13% Similarity=0.187 Sum_probs=38.1
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCCCC
Q 010178 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVG 127 (516)
Q Consensus 55 ~f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~I~ 127 (516)
.+++.+... . ++.|.. ||||+|++....+.+.. +.+..+|++.+. ...+.+..|..
T Consensus 10 ~v~~~i~~~---~-Vvvy~k~t~~~p~Cp~C~~ak~~L~~~g-------------i~~~~~dI~~~~~~~~~l~~~~g~~ 72 (109)
T 3ipz_A 10 TLEKLVNSE---K-VVLFMKGTRDFPMCGFSNTVVQILKNLN-------------VPFEDVNILENEMLRQGLKEYSNWP 72 (109)
T ss_dssp HHHHHHTSS---S-EEEEESBCSSSBSSHHHHHHHHHHHHTT-------------CCCEEEEGGGCHHHHHHHHHHHTCS
T ss_pred HHHHHHccC---C-EEEEEecCCCCCCChhHHHHHHHHHHcC-------------CCcEEEECCCCHHHHHHHHHHHCCC
Confidence 344555553 2 455665 49999999987776531 334556653221 12344445889
Q ss_pred ccCeEEE
Q 010178 128 HYPMLLW 134 (516)
Q Consensus 128 ~~PTl~~ 134 (516)
.+|++++
T Consensus 73 tvP~ifi 79 (109)
T 3ipz_A 73 TFPQLYI 79 (109)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 9998865
No 311
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=89.65 E-value=0.25 Score=44.68 Aligned_cols=57 Identities=9% Similarity=0.126 Sum_probs=41.6
Q ss_pred CCeEEEEEe-cCCChhhhhhhHHHHHHHHHhCCCCCCCCCeE-EEEEEecccc-ccHHHHHhCCCC
Q 010178 65 ATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGII-LMTRVDCALK-INTNLCDKFSVG 127 (516)
Q Consensus 65 ~k~vlV~Fy-A~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v-~~~~VDc~~d-~~~~l~~~~~I~ 127 (516)
++++++.|| ..|||.|..+.+.|.+.+.+++..+ + .++.|.++.. .....++++++.
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g------v~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG------YHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT------CCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC------CCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 477788887 6899999999999999999887533 4 3667776431 234567777763
No 312
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=88.37 E-value=0.21 Score=39.88 Aligned_cols=53 Identities=8% Similarity=-0.037 Sum_probs=34.7
Q ss_pred EEEEecCCChhh------hhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCC--CCccCeEEE
Q 010178 69 VVEFFANWCPAC------RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLW 134 (516)
Q Consensus 69 lV~FyA~WC~~C------~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~--I~~~PTl~~ 134 (516)
++.|..+|||.| ++..-.+++ . .+.+..+|++.+. -..+.+.+| ...+|.+++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~----~---------~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG----K---------RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T---------TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH----C---------CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 677899999999 565544442 2 1556677775321 124556778 779999865
No 313
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=88.23 E-value=0.27 Score=41.54 Aligned_cols=64 Identities=13% Similarity=0.118 Sum_probs=38.5
Q ss_pred ccHHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEE-EEEEeccccc--cHHHHHhCC
Q 010178 54 TNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIIL-MTRVDCALKI--NTNLCDKFS 125 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~-~~~VDc~~d~--~~~l~~~~~ 125 (516)
+.+++.+.++ . +|.|.. ||||+|++....++++ . +. +..+|++.+. -..+.+..|
T Consensus 11 ~~v~~~i~~~---~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~----g---------v~~~~~vdV~~d~~~~~~l~~~tg 73 (118)
T 2wem_A 11 EQLDALVKKD---K-VVVFLKGTPEQPQCGFSNAVVQILRLH----G---------VRDYAAYNVLDDPELRQGIKDYSN 73 (118)
T ss_dssp HHHHHHHHHS---S-EEEEESBCSSSBSSHHHHHHHHHHHHT----T---------CCCCEEEESSSCHHHHHHHHHHHT
T ss_pred HHHHHHhccC---C-EEEEEecCCCCCccHHHHHHHHHHHHc----C---------CCCCEEEEcCCCHHHHHHHHHHhC
Confidence 3455666664 2 455666 4999999998777653 1 32 4455553221 123334448
Q ss_pred CCccCeEEE
Q 010178 126 VGHYPMLLW 134 (516)
Q Consensus 126 I~~~PTl~~ 134 (516)
...+|++++
T Consensus 74 ~~tvP~vfI 82 (118)
T 2wem_A 74 WPTIPQVYL 82 (118)
T ss_dssp CCSSCEEEE
T ss_pred CCCcCeEEE
Confidence 889999866
No 314
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=84.06 E-value=1.3 Score=40.01 Aligned_cols=42 Identities=7% Similarity=-0.037 Sum_probs=32.6
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
.+.+||+|...-||+|+++.+.+.++-+++.. ++|.++.-+.
T Consensus 14 a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~------g~v~~v~r~~ 55 (182)
T 3gn3_A 14 GPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGE------DNVTVRIRLQ 55 (182)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHHHCT------TTEEEEEEEC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHHhCC------CCEEEEEEEc
Confidence 36779999999999999999999887766621 4577776663
No 315
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=83.94 E-value=1.7 Score=39.00 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=32.4
Q ss_pred CCeEEEEEecCCChhhhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~-~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
.+..|++|+..-||+|..+.+.+ .++.+.|.+. +.|.+.....
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~-----~~v~~~~~~~ 54 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDN-----HKVEYQFVNL 54 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-----TSSEEEEEEC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhccC-----CeEEEEEEec
Confidence 46689999999999999999998 5787777431 3466665553
No 316
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=82.64 E-value=1 Score=41.37 Aligned_cols=47 Identities=9% Similarity=0.162 Sum_probs=35.7
Q ss_pred ccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 116 ~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
++...++++||.++||++++.+|+. +..+.|..+.+.|.+.|++.+.
T Consensus 164 ~~~~~a~~~gv~g~Pt~~i~~~G~~-------------~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 164 AGFQRVAQWGISGFPALVVESGTDR-------------YLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTEE-------------EEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccceEEEEECCEE-------------EEeccCCCCHHHHHHHHHHHHH
Confidence 3456788999999999998776632 1235688889999999887664
No 317
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=80.15 E-value=2.7 Score=38.80 Aligned_cols=43 Identities=23% Similarity=0.397 Sum_probs=32.1
Q ss_pred CCeEEEEEecCCChhhhhhhHHHHHHHH-HhCCCCCCCCCeEEEEEEec
Q 010178 65 ATYAVVEFFANWCPACRNYKPQYEKVAR-LFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 65 ~k~vlV~FyA~WC~~C~~~~P~~~~la~-~~~~~~~~~~~~v~~~~VDc 112 (516)
.+.+||+|...-||+|+++.+.....-+ +|-+. ++|.++..+.
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~-----g~v~~v~r~~ 58 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQP-----GKGAIEVRNF 58 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-----TSEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccC-----CeEEEEEEeC
Confidence 4668999999999999999998865444 66321 5677776664
No 318
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=78.82 E-value=0.94 Score=45.77 Aligned_cols=67 Identities=12% Similarity=0.177 Sum_probs=39.1
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhhhhhhH-HHHHHHHHhCCCCCCCCCeEEEEEEecccccc----HHHHHhCCCCcc
Q 010178 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKP-QYEKVARLFNGPNAAHPGIILMTRVDCALKIN----TNLCDKFSVGHY 129 (516)
Q Consensus 55 ~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P-~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~----~~l~~~~~I~~~ 129 (516)
.+++.+... . ++.|..+|||+|++..- .++++.-.| ..+.++.+|-. +++ ..+.+..|.+.+
T Consensus 253 ~V~~lI~~~---~-VvVYsk~~CPyC~~Ak~~LL~~~gV~y--------~eidVlEld~~-~~~~e~~~~L~~~tG~~TV 319 (362)
T 2jad_A 253 HVKDLIAEN---E-IFVASKTYCPYSHAALNTLFEKLKVPR--------SKVLVLQLNDM-KEGADIQAALYEINGQRTV 319 (362)
T ss_dssp HHHHHHHTC---S-EEEEECTTCHHHHHHHHHHHTTTCCCT--------TTEEEEEGGGS-TTHHHHHHHHHHHHCCCSS
T ss_pred HHHHHhccC---C-EEEEEcCCCcchHHHHHHHHHHcCCCc--------ceEEEEEeccc-cCCHHHHHHHHHHHCCCCc
Confidence 344455543 2 67799999999998764 344332122 12455554421 112 335556799999
Q ss_pred CeEEE
Q 010178 130 PMLLW 134 (516)
Q Consensus 130 PTl~~ 134 (516)
|++++
T Consensus 320 PqVFI 324 (362)
T 2jad_A 320 PNIYI 324 (362)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99865
No 319
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=77.69 E-value=1.6 Score=39.07 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=29.8
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+..+++++||.|+||+++ +|+ .+.|..+.+.|.+.|.+.+.
T Consensus 138 ~~~~a~~~gv~GtPt~vv--nG~----------------~~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI--NGE----------------KVEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTE----------------ECSCTTCHHHHHHHHHC---
T ss_pred HHHHHHHcCCCCCCeEEE--CCE----------------EcCCCCCHHHHHHHHHHHHH
Confidence 456788999999999987 442 24577889999998876553
No 320
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.78 E-value=2.8 Score=28.79 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=17.0
Q ss_pred eeHHHHHHHHHHHhhhhHHHHHHHHHhhhc
Q 010178 480 VPVGAALAIALASCAFGALACYWRSQQKNR 509 (516)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (516)
+-.|...|+++.....+++.+|||....++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 334444456666666667778885544433
No 321
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=74.74 E-value=4.4 Score=34.26 Aligned_cols=58 Identities=10% Similarity=-0.028 Sum_probs=34.5
Q ss_pred EEEEEecCCChhhhhhhH--HHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhC--------CCCccCeEEE
Q 010178 68 AVVEFFANWCPACRNYKP--QYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKF--------SVGHYPMLLW 134 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P--~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~--------~I~~~PTl~~ 134 (516)
|++.|.++.||.|+-..- ..+.+-+.. .|.|-.+|++.+. -.++.++. |.+.+|.|++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~k---------gV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEAN---------KIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHHT---------TCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHHC---------CCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 367788999999952211 111222221 3678888875332 13455676 7788888876
No 322
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=73.65 E-value=2.2 Score=39.04 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=33.6
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+...++++||.|+||+++..+|+.. ....|..+.+.+++.|++.+.
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~~~~~~-------------~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQINDAYF-------------PIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEE-------------EECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEECCEEE-------------EeeCCCCCHHHHHHHHHHHHh
Confidence 4456778999999999997655321 234577788889888887764
No 323
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=73.36 E-value=2.2 Score=29.31 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHh
Q 010178 483 GAALAIALASCAFGALACYWRSQQ 506 (516)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~ 506 (516)
|...++++.....+.+.+|||..+
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eehHHHHHHHHHHHHHHHHhhhhh
Confidence 333346666566667778885443
No 324
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=71.08 E-value=2.8 Score=45.03 Aligned_cols=64 Identities=16% Similarity=0.254 Sum_probs=41.1
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecccccc-----HHHHHhCCCCc
Q 010178 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (516)
Q Consensus 54 ~~f~~~l~~~~~k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~~~I~~ 128 (516)
+.+++.+... + ++.|..+|||+|++....+++.. +.+-.+|.+.+.+ ..+.+..+...
T Consensus 9 ~~v~~~i~~~--~--v~vy~~~~Cp~C~~~k~~L~~~~-------------i~~~~~dv~~~~~~~~~~~~l~~~~g~~t 71 (598)
T 2x8g_A 9 QWLRKTVDSA--A--VILFSKTTCPYCKKVKDVLAEAK-------------IKHATIELDQLSNGSAIQKCLASFSKIET 71 (598)
T ss_dssp HHHHHHHHHC--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEEGGGSTTHHHHHHHTHHHHSCCC
T ss_pred HHHHHHhccC--C--EEEEECCCChhHHHHHHHHHHCC-------------CCcEEEEcccCcchHHHHHHHHHHhCCce
Confidence 4566666653 2 68899999999999887777532 2233455543222 22334568889
Q ss_pred cCeEEE
Q 010178 129 YPMLLW 134 (516)
Q Consensus 129 ~PTl~~ 134 (516)
+|.+++
T Consensus 72 vP~v~i 77 (598)
T 2x8g_A 72 VPQMFV 77 (598)
T ss_dssp SCEEEE
T ss_pred eCEEEE
Confidence 999854
No 325
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=66.62 E-value=3.8 Score=36.90 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=31.2
Q ss_pred ccHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 116 ~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
.+...++++||+|+||+++ +|+. +....|..+.+.+.+.|+..+
T Consensus 140 ~~~~~a~~~gv~GtPtfvv--ng~~-------------~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 140 NAKMLSEKSGISSVPTFVV--NGKY-------------NVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHHTCCSSSEEEE--TTTE-------------EECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCEEEE--CCEE-------------EEecCCCCCHHHHHHHHHHHH
Confidence 3456788999999999987 3321 112367788888888887654
No 326
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=64.37 E-value=4.6 Score=37.16 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=31.5
Q ss_pred cHHHH-HhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhcc
Q 010178 117 NTNLC-DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (516)
Q Consensus 117 ~~~l~-~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~ 175 (516)
+...+ +++||+|+||+++ +| ..+.|..+.+.|.+.|.+.+.
T Consensus 156 ~~~~a~~~~GV~GtPtfvv--ng----------------~~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 156 ETDEAINQYNVSGTPSFMI--DG----------------ILLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHHCCCSSSEEEE--TT----------------EECTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCccCCEEEE--CC----------------EEEeCCCCHHHHHHHHHHHhh
Confidence 34566 8899999999987 33 135688899999999987654
No 327
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=63.95 E-value=4.7 Score=36.33 Aligned_cols=38 Identities=8% Similarity=0.061 Sum_probs=27.5
Q ss_pred HHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHH
Q 010178 118 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 118 ~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
...++++||+++||+++ +|+. +..+.|..+.+++.++|
T Consensus 144 ~~~a~~~GV~gtPtf~i--ng~~-------------~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI--NGLV-------------QPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHTCCSSSEEEE--TTEE-------------CTTCCTTSCHHHHHHHH
T ss_pred HHHHHHCCCCccCEEEE--CCEE-------------ccCCCCCCCHHHHHHHh
Confidence 35678899999999987 3322 22356778888888776
No 328
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=61.92 E-value=60 Score=26.44 Aligned_cols=84 Identities=12% Similarity=0.182 Sum_probs=62.0
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccccHHHHHhCCCCccCeEEEecCCcccCCCCCC
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~ 147 (516)
....|.|.--+..++....+.++-+.+... +.+.+-.||. .+++++++.++|-.+||++=..+
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~-----~~y~LeVIDv--~eqPeLAE~~~IvATPTLIK~~P---------- 75 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEAT-----VPISLQVINV--ADQPQLVEYYRLVVTPALVKIGP---------- 75 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCS-----SCEEEEEEET--TTCHHHHHHTTCCSSSEEEEEES----------
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccC-----CceEEEEeec--ccCHHHHhHcCeeeccHhhccCC----------
Confidence 344778888888888888888877766521 4588888997 47999999999999999875322
Q ss_pred CccccchhhccccCCHHHHHHHHHH
Q 010178 148 NQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 148 ~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
.....+.|.--.+.|..|.-+
T Consensus 76 ----~P~rriiGd~i~~ql~~wwpr 96 (105)
T 1t4y_A 76 ----GSRQVLSGIDLTDQLANQLPQ 96 (105)
T ss_dssp ----SSCEEEESSCHHHHHHHHHHH
T ss_pred ----CCceEEeChHHHHHHHHHhHH
Confidence 123556777777777777644
No 329
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=59.57 E-value=6 Score=35.89 Aligned_cols=42 Identities=10% Similarity=-0.074 Sum_probs=31.2
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
+...++++||.|+||+++ +| ..+.|....+.|.+.|.+....
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi--~g----------------~~~~G~~~~~~l~~~l~~~~~~ 197 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL--GD----------------EMWWGNDRLFMLESAMGRLCRQ 197 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT----------------EEEESGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE--CC----------------EEEECCCCHHHHHHHHhccccc
Confidence 445678899999999987 33 1356778888888888776543
No 330
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=57.51 E-value=6.7 Score=32.91 Aligned_cols=66 Identities=14% Similarity=0.116 Sum_probs=38.6
Q ss_pred cccHHHHHhcCCCCeEEEEEec-----CCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccccc--cHHHHHhCC
Q 010178 53 ATNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS 125 (516)
Q Consensus 53 ~~~f~~~l~~~~~k~vlV~FyA-----~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~~~ 125 (516)
.+.+++.+.++ + +|.|.- |.||.|++....+... . ...+..+|...+. -..+.+.-|
T Consensus 10 ~e~i~~~i~~~--~--VvvF~Kgt~~~P~C~fc~~ak~lL~~~----g--------v~~~~~~~v~~~~~~r~~l~~~sg 73 (118)
T 2wul_A 10 AEQLDALVKKD--K--VVVFLKGTPEQPQCGFSNAVVQILRLH----G--------VRDYAAYNVLDDPELRQGIKDYSN 73 (118)
T ss_dssp HHHHHHHHHHS--S--EEEEESBCSSSBSSHHHHHHHHHHHHT----T--------CCSCEEEETTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHhcC--C--EEEEEcCCCCCCCCHHHHHHHHHHHHh----C--------CcCeEeecccCCHHHHHHHHHhcc
Confidence 34567777774 2 466643 5799999988666532 1 1124455653221 123444557
Q ss_pred CCccCeEEE
Q 010178 126 VGHYPMLLW 134 (516)
Q Consensus 126 I~~~PTl~~ 134 (516)
-+.+|.+++
T Consensus 74 ~~TvPqIFI 82 (118)
T 2wul_A 74 WPTIPQVYL 82 (118)
T ss_dssp CCSSCEEEE
T ss_pred CCCCCeEeE
Confidence 778888866
No 331
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=52.38 E-value=5.2 Score=35.62 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=29.5
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhc
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l 174 (516)
+...++++||.|+||+++ +|+.. ....|..+.+.+.+.|++.+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng~~~-------------~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NGKYL-------------IYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TTTEE-------------ECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEE-------------eccCCCCCHHHHHHHHHHHH
Confidence 455678899999999866 33210 11236678899999888765
No 332
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=45.95 E-value=15 Score=34.34 Aligned_cols=42 Identities=7% Similarity=0.080 Sum_probs=31.6
Q ss_pred HHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHHhccc
Q 010178 118 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (516)
Q Consensus 118 ~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~~l~~ 176 (516)
...++++||.|+||+++ +|+ ..+.|..+.+.+.+.|++.+..
T Consensus 173 ~~~a~~~Gv~GvPtfvv--~g~---------------~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 173 EREAAQLGATGVPFFVL--DRA---------------YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHHTTCCSSSEEEE--TTT---------------EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCeeCeEEE--CCc---------------EeecCCCCHHHHHHHHHHHHhh
Confidence 34567899999999987 221 2356888999999999887653
No 333
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=45.42 E-value=4.1 Score=27.21 Aligned_cols=19 Identities=21% Similarity=0.295 Sum_probs=11.4
Q ss_pred cccceeeeHHHHHHHHHHH
Q 010178 474 STNAVVVPVGAALAIALAS 492 (516)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~ 492 (516)
+.+.+.+.+|+++|+.+..
T Consensus 9 ~~~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 9 GSGNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp CCSSTHHHHHHHHHHHHHH
T ss_pred CCceEEEEeehhHHHHHHH
Confidence 3344556677777777644
No 334
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=42.45 E-value=14 Score=29.40 Aligned_cols=18 Identities=22% Similarity=0.554 Sum_probs=15.8
Q ss_pred CChHHHHHHHHHHhCCCc
Q 010178 432 WDQDEVFKFLTNYYGNTL 449 (516)
Q Consensus 432 w~~~~V~~fL~~~Y~~~~ 449 (516)
-..++|..||+..||.--
T Consensus 57 ~Sd~eI~~~mv~RYGdfV 74 (90)
T 2kw0_A 57 KSKKEIVDYMVARYGNFV 74 (90)
T ss_dssp CCHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHhcCCeE
Confidence 568999999999999863
No 335
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=41.22 E-value=18 Score=29.66 Aligned_cols=21 Identities=10% Similarity=0.186 Sum_probs=16.8
Q ss_pred EEEEecCCChhhhhhhHHHHH
Q 010178 69 VVEFFANWCPACRNYKPQYEK 89 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~ 89 (516)
++.|+.++|+.|++....+++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456789999999998766654
No 336
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=41.08 E-value=18 Score=28.36 Aligned_cols=17 Identities=18% Similarity=0.501 Sum_probs=15.3
Q ss_pred CChHHHHHHHHHHhCCC
Q 010178 432 WDQDEVFKFLTNYYGNT 448 (516)
Q Consensus 432 w~~~~V~~fL~~~Y~~~ 448 (516)
-..++|..||+..||.-
T Consensus 60 ~sd~eI~~~~v~RYG~f 76 (84)
T 2hl7_A 60 KSDGEIVDYMVARYGDF 76 (84)
T ss_dssp CCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHhcCCe
Confidence 56899999999999986
No 337
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=40.09 E-value=19 Score=30.37 Aligned_cols=21 Identities=24% Similarity=0.524 Sum_probs=17.3
Q ss_pred EEEEecCCChhhhhhhHHHHH
Q 010178 69 VVEFFANWCPACRNYKPQYEK 89 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~ 89 (516)
++.|+.++|+.|++....+++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~ 23 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE 23 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 566889999999998877764
No 338
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=38.74 E-value=19 Score=32.52 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=27.5
Q ss_pred cHHHHHhCCCCccCeEEEecCCcccCCCCCCCccccchhhccccCCHHHHHHHHHH
Q 010178 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (516)
Q Consensus 117 ~~~l~~~~~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i~~ 172 (516)
+...+++.||.|+||+++ +| ..+.|....+.|.++|.+
T Consensus 162 ~~~~a~~~Gv~GvPtfvv--~g----------------~~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 162 IGEDAVARGIFGSPFFLV--DD----------------EPFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT----------------EEEESGGGHHHHHHHHHT
T ss_pred HHHHHHHCCCCcCCEEEE--CC----------------EEEecCCCHHHHHHHHhc
Confidence 345677899999999987 22 235677777788777753
No 339
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=36.81 E-value=23 Score=29.29 Aligned_cols=21 Identities=14% Similarity=0.165 Sum_probs=17.2
Q ss_pred EEEEecCCChhhhhhhHHHHH
Q 010178 69 VVEFFANWCPACRNYKPQYEK 89 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~ 89 (516)
++.|+.++|+.|++..-.+++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~ 27 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED 27 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 566789999999998877765
No 340
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=31.71 E-value=31 Score=28.53 Aligned_cols=21 Identities=24% Similarity=0.602 Sum_probs=16.7
Q ss_pred EEEEecCCChhhhhhhHHHHH
Q 010178 69 VVEFFANWCPACRNYKPQYEK 89 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~ 89 (516)
+..|+.++|+.|++..-.+++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~ 22 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR 22 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH
Confidence 456789999999998866653
No 341
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=30.74 E-value=29 Score=28.88 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=28.1
Q ss_pred CeEEEEEecCCChhhhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010178 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (516)
Q Consensus 66 k~vlV~FyA~WC~~C~~~~P~~~~la~~~~~~~~~~~~~v~~~~VDc 112 (516)
|.++|.|.-|.|+-|......++++..+ ..+..||.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~lede-----------Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSE-----------YDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTT-----------EEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcc-----------ccEEEEEe
Confidence 4579999999999999988777555444 45778885
No 342
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=35.41 E-value=11 Score=20.80 Aligned_cols=13 Identities=46% Similarity=1.122 Sum_probs=10.8
Q ss_pred cCChHHHHHHHHH
Q 010178 347 FVCEECRQHFYQM 359 (516)
Q Consensus 347 f~C~~C~~hf~~~ 359 (516)
|.|++|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 7899999999653
No 343
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=27.82 E-value=34 Score=25.80 Aligned_cols=30 Identities=37% Similarity=0.385 Sum_probs=13.5
Q ss_pred cccccccccceeeeHHHHHHHHHHHhhhhHHHH
Q 010178 468 LEDLVVSTNAVVVPVGAALAIALASCAFGALAC 500 (516)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (516)
+.|++.++- ||+|+..+ |++|..+..++.|
T Consensus 5 i~dhspttg--vvtv~vil-iavaalg~li~gc 34 (90)
T 1zza_A 5 IMDHSPTTG--VVTVIVIL-IAIAALGALILGC 34 (90)
T ss_dssp SCTTTTHHH--HHHHHHHH-HHHHHHHHHHHHH
T ss_pred eeccCCCcc--eEEehhHH-HHHHHHHHHHHHH
Confidence 455554443 34554433 5555444433333
No 344
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=27.66 E-value=29 Score=31.35 Aligned_cols=19 Identities=5% Similarity=0.120 Sum_probs=15.7
Q ss_pred ccHHHHHhCCCCccCeEEE
Q 010178 116 INTNLCDKFSVGHYPMLLW 134 (516)
Q Consensus 116 ~~~~l~~~~~I~~~PTl~~ 134 (516)
.+...++.+||+++||+++
T Consensus 38 ~~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 38 QQEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHcCCCcCCEEEE
Confidence 3456788999999999976
No 345
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=26.66 E-value=74 Score=28.46 Aligned_cols=28 Identities=25% Similarity=0.490 Sum_probs=25.3
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHhC
Q 010178 68 AVVEFFANWCPACRNYKPQYEKVARLFN 95 (516)
Q Consensus 68 vlV~FyA~WC~~C~~~~P~~~~la~~~~ 95 (516)
.|..|+..-||.|-...|.++++.+.+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~ 31 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP 31 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC
Confidence 4788889999999999999999999884
No 346
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=25.89 E-value=45 Score=27.57 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=16.7
Q ss_pred EEEEecCCChhhhhhhHHHHH
Q 010178 69 VVEFFANWCPACRNYKPQYEK 89 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~ 89 (516)
+..|+.++|+.|++....+++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~ 25 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD 25 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 456779999999998866654
No 347
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=24.67 E-value=37 Score=21.74 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=12.2
Q ss_pred eeeHHHHHHHHHHHhhhhHHHHHHHHH
Q 010178 479 VVPVGAALAIALASCAFGALACYWRSQ 505 (516)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (516)
++-+|.+|-..+ .|.-.+|||-.
T Consensus 11 t~i~gl~vif~~----lg~tflywrgr 33 (40)
T 2l9u_A 11 TVIAGLVVIFMM----LGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----hCceeEEEccc
Confidence 334455554444 44445899753
No 348
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=24.56 E-value=65 Score=28.77 Aligned_cols=27 Identities=15% Similarity=0.302 Sum_probs=23.3
Q ss_pred eEEEEEecCCChhhhhhhHHHHHHHHH
Q 010178 67 YAVVEFFANWCPACRNYKPQYEKVARL 93 (516)
Q Consensus 67 ~vlV~FyA~WC~~C~~~~P~~~~la~~ 93 (516)
..|+.|+..-||+|....+.++++.+.
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~~ 34 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQE 34 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCchhhcchHHHHHHHhc
Confidence 457888889999999999999999884
No 349
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=23.73 E-value=12 Score=32.41 Aligned_cols=17 Identities=24% Similarity=0.782 Sum_probs=15.1
Q ss_pred CCCCCCCCCChhhhccC
Q 010178 404 KIIWPPKQLCSSCYRSH 420 (516)
Q Consensus 404 k~~~P~~~~Cp~C~~~~ 420 (516)
+++|||...||.|...+
T Consensus 55 ~~~~PPr~~Cp~C~s~~ 71 (145)
T 3irb_A 55 RIFVPARSYCEHCFVKI 71 (145)
T ss_dssp CEEESCCSEETTTTEEC
T ss_pred cEEcCchhhCcCCCCCc
Confidence 69999999999999763
No 350
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=22.19 E-value=55 Score=29.86 Aligned_cols=40 Identities=13% Similarity=-0.000 Sum_probs=0.0
Q ss_pred cccHHHHHhCCCCccCeEEEecC--CcccCCCCCCCccccchhhccccCCHHHHHHHH
Q 010178 115 KINTNLCDKFSVGHYPMLLWGSP--SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (516)
Q Consensus 115 d~~~~l~~~~~I~~~PTl~~f~~--g~~~~~~~~~~~~~~~v~~~~G~~~~e~L~~~i 170 (516)
..+...++++||.|+||+++-.+ | ..+.|....+.+.+.|
T Consensus 169 ~~~~~~a~~~gv~G~Ptfvv~~~g~~----------------~~~~G~~~~~~l~~~l 210 (226)
T 1r4w_A 169 RETTGAACKYGAFGLPTTVAHVDGKT----------------YMLFGSDRMELLAYLL 210 (226)
T ss_dssp HHHHHHHHHTTCCSSCEEEEEETTEE----------------EEEESTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEeCCCCc----------------CceeCCCcHHHHHHHh
No 351
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=22.16 E-value=49 Score=27.37 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.7
Q ss_pred EEEEecCCChhhhhhhHHHHH
Q 010178 69 VVEFFANWCPACRNYKPQYEK 89 (516)
Q Consensus 69 lV~FyA~WC~~C~~~~P~~~~ 89 (516)
+..|+.++|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456789999999998766653
No 352
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=27.23 E-value=19 Score=20.29 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=10.6
Q ss_pred cCChHHHHHHHHH
Q 010178 347 FVCEECRQHFYQM 359 (516)
Q Consensus 347 f~C~~C~~hf~~~ 359 (516)
|.|+.|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 3 CQCVMCGKAFTQA 15 (29)
Confidence 7899999999653
No 353
>3p0k_A Sulfhydryl oxidase; 4-helix bundle, 5-helix bundle, flavin adenine dinucleotide, oxidoreductase, viral protein; HET: FAD; 1.47A {Autographa californica nucleopolyhedro} PDB: 3qzy_A* 3ust_A*
Probab=21.42 E-value=37 Score=32.15 Aligned_cols=43 Identities=28% Similarity=0.594 Sum_probs=29.1
Q ss_pred HHHHHHHHhccCCC-------CCCH---HHHHHHHHHhHhc---cCChHHHHHHHH
Q 010178 316 LWVLLHSLSVRIDD-------GESQ---FTFTAVCDFIHNF---FVCEECRQHFYQ 358 (516)
Q Consensus 316 lW~lfH~ltv~~~~-------~~~~---~~~~~~~~~v~~f---f~C~~C~~hf~~ 358 (516)
.|=..|.|+.-.+| ..-. ..+..|+..+.+. ..|.-||+|+..
T Consensus 110 IWD~IHfL~li~DDmV~nR~k~~~d~v~~~l~n~K~lfYNiF~~L~C~mC~~HYl~ 165 (266)
T 3p0k_A 110 IWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMN 165 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHCCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHHHHHHHHHHHhhHhheeCChHHhHHHEe
Confidence 69999999986543 1122 2355555556653 399999999964
No 354
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=25.51 E-value=22 Score=20.07 Aligned_cols=13 Identities=31% Similarity=0.940 Sum_probs=10.7
Q ss_pred cCChHHHHHHHHH
Q 010178 347 FVCEECRQHFYQM 359 (516)
Q Consensus 347 f~C~~C~~hf~~~ 359 (516)
|.|..|.+.|...
T Consensus 4 ~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 4 YVCIHCQRQFADP 16 (30)
Confidence 7899999999653
Done!