Query 010181
Match_columns 516
No_of_seqs 177 out of 220
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 21:39:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2de0_X Alpha-(1,6)-fucosyltran 100.0 7.1E-62 2.4E-66 525.2 25.4 314 128-516 110-437 (526)
2 2hhc_A NODZ, nodulation fucosy 99.8 7.9E-21 2.7E-25 192.1 13.9 119 375-500 168-300 (330)
3 4ap5_A GDP-fucose protein O-fu 99.1 1.2E-09 4.1E-14 114.0 16.0 124 374-511 263-391 (408)
4 3zy2_A Putative GDP-fucose pro 98.8 3.7E-09 1.2E-13 108.9 6.7 107 374-501 209-348 (362)
5 1psw_A ADP-heptose LPS heptosy 50.6 66 0.0022 31.0 9.4 97 375-496 179-279 (348)
6 3ioh_A Histo-blood group ABO s 50.3 10 0.00035 38.4 3.5 102 375-490 56-165 (298)
7 1o7q_A N-acetyllactosaminide a 46.8 14 0.00049 37.1 3.9 100 376-490 47-156 (289)
8 3tov_A Glycosyl transferase fa 39.0 1.2E+02 0.0039 30.1 9.3 93 375-495 184-278 (349)
9 2gt1_A Lipopolysaccharide hept 30.7 1.1E+02 0.0036 29.5 7.2 91 375-496 177-271 (326)
10 3zy2_A Putative GDP-fucose pro 17.4 68 0.0023 33.2 2.9 58 169-233 10-67 (362)
No 1
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=100.00 E-value=7.1e-62 Score=525.24 Aligned_cols=314 Identities=21% Similarity=0.332 Sum_probs=252.8
Q ss_pred cCCCCCCcccCCccCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeecCCCCcchhHHHHHHHHHHHHHHhcCcEEEEe
Q 010181 128 SEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTN 207 (516)
Q Consensus 128 ~~~~~~~w~~g~d~e~~pLt~~vQr~I~~~QnP~dCs~A~~K~Lvc~~~~~cGfGcg~H~~~~C~~l~~A~~t~RtLIld 207 (516)
+.+|+..|+ ..+++|||++||++|+.+|||+||++| |||+|+++..|||||.+|++++|++ +|+++|||||+|
T Consensus 110 ~~~g~~~~r---~~~~~~lt~~vq~~i~~~QnP~~Cs~a--K~Lv~~~~~~~GfGs~lh~l~~~L~--~A~~~~Rtliid 182 (526)
T 2de0_X 110 QTDGAGDWR---EKEAKDLTELVQRRITYLQNPKDCSKA--KKLVCNINKGCGYGCQLHHVVYCFM--IAYGTQRTLILE 182 (526)
T ss_dssp HTTTHHHHH---HHHHHHHHHHHHHHHHHHHCCSCGGGS--CEEEEECCCSSCHHHHHHHHHHHHH--HHHHHTCEEEEE
T ss_pred hhhchhHHH---HHHHHHHHHHHHHHHHHhcCCCcCCCC--CEEEEEecCCCchHHHHHHHHHHHH--HHHhhCCEEEEE
Confidence 456777787 488999999999999999999999999 9999999888999999999999999 999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCccccccCCcccccccc----cccccchhhhccCceee--ccCCCCcccccCCCCCCCCCCCc
Q 010181 208 YYNRADHDGCKGSSRSSWSCYFLPETSQECRDRA----FELMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPWS 281 (516)
Q Consensus 208 ~~~~~~~~Gc~~~~~~~Wsc~F~p~sS~~C~~~a----~~~~~~~~~~~~~iv~~--~~~~~~~~~~~g~~P~~~~~P~~ 281 (516)
+.+|.+++| +|+|||.| .|++|..+. ..|..........||.. .+++.+.++|. |+++|.+
T Consensus 183 d~~w~Y~~g-------~w~~yF~P-~s~~C~~~~~~~~~~w~~~~~~~~~~vV~~~~i~~~~~~~~~~-----~~~~P~~ 249 (526)
T 2de0_X 183 SQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPRPPYL-----PLAVPED 249 (526)
T ss_dssp CTTCSSCTT-------CGGGTBCC-SCSSCCCCCCSCCCBCCCTTGGGGCSEEEECCGGGCSSCCSCC-----TTCEEGG
T ss_pred CCCCCcCCC-------CHHHhhhC-cCccccCCCccccCCCCCcccCCCcceEEeecccccccccccc-----ccccchh
Confidence 999877543 59999999 578998862 22332211123456654 33444555565 5689999
Q ss_pred ccccccccccchhhhcccchhhHHHHHHHHHhhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCcchhcccCCccc
Q 010181 282 YLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSD 361 (516)
Q Consensus 282 ~~~~~~~~hg~p~~~~~~~~~~WW~gQ~~~YLmRp~~~~l~~Lln~~R~~afg~~aa~~~~~~l~~~w~~~~~~~~~~~~ 361 (516)
..+.+..+||+| ++||+||+++|||||++++ ++.+++.+. +
T Consensus 250 ~~~~L~~l~~dp--------~~w~~~q~~~yl~rP~~~i-~~~I~~~~~------------------------------~ 290 (526)
T 2de0_X 250 LADRLVRVHGDP--------AVWWVSQFVKYLIRPQPWL-EKEIEEATK------------------------------K 290 (526)
T ss_dssp GHHHHHHHCSCH--------HHHHHHHHHHHHTCBCHHH-HHHHHHHHH------------------------------H
T ss_pred HHHHHHhccCCc--------HHHHHHHHHHHHcCCCHHH-HHHHHHHHH------------------------------H
Confidence 999999999999 9999999999999999965 455554321 2
Q ss_pred hhhhhhccCCCCCCCCeEEEEEcCCCcc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCChHHHHHhh-cCC
Q 010181 362 IEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LYP 434 (516)
Q Consensus 362 i~~~v~s~~kp~~~~PiVGVHIRRgDK~-~Ea~~~~~eeYm~~Ve~~~~-----~~p~~r~IfLATDD~~Vi~eak-~Yp 434 (516)
++ ++.|+||||||||||+ .|+.++++++||++|++|++ ..+..++||||||||+|+++++ +||
T Consensus 291 l~----------~~~piVGVHIRrGDk~~~E~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLATDDp~v~~e~k~~~p 360 (526)
T 2de0_X 291 LG----------FKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYP 360 (526)
T ss_dssp HT----------CCSSEEEEEECCC-----CCCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEESCHHHHHHHHHHCT
T ss_pred hC----------CCCCEEEEEEeCCCCCccccccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEcCCHHHHHHHHHhCC
Confidence 33 6899999999999995 69999999999999998876 3456779999999999999999 899
Q ss_pred CceEEeeceecccCCchhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhccC-CcccceeeccCC
Q 010181 435 HWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVNKD 513 (516)
Q Consensus 435 ~y~f~~t~I~r~~g~~s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~ELrqt~~-ka~~~F~Svd~~ 513 (516)
+|+|+.+. .. ..+ .....+.+.+++.++++||+|||+||+||||+||||||++++||++.+ ++...|.|||++
T Consensus 361 ~~~~~~d~-~~---~~~--a~~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~~srla~~l~~~~~~~~~~~~~SLD~~ 434 (526)
T 2de0_X 361 NYEFISDN-SI---SWS--AGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDI 434 (526)
T ss_dssp TSEEECCC-CS---SCS--SGGGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSHHHHHHHHHHTTSSSCCTTCEEESSCC
T ss_pred CCEEecCc-cc---ccc--cCccccccHHHHHHHHHHHHHHhcCCeeecCCCCHHHHHHHHHhcCcCccccccccCCccc
Confidence 99986322 11 111 111233366788999999999999999999999999999999999987 788899999999
Q ss_pred CCC
Q 010181 514 RFW 516 (516)
Q Consensus 514 ~~~ 516 (516)
+.|
T Consensus 435 ~~~ 437 (526)
T 2de0_X 435 YYF 437 (526)
T ss_dssp SCC
T ss_pred ccc
Confidence 865
No 2
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*
Probab=99.84 E-value=7.9e-21 Score=192.10 Aligned_cols=119 Identities=13% Similarity=0.168 Sum_probs=75.6
Q ss_pred CCCeEEEEEcCCCccc-ccc-------ccCHHHHHHHHHHHHHhCCC-CcEEEEeCCChHHHHHhh-cCCCceEEeecee
Q 010181 375 PRPMLSMHVRMGDKAC-EMK-------VVEFEKYMLLADRIRKHFPH-LNSIWLSTEMQEVVDKSK-LYPHWNFYFTNVT 444 (516)
Q Consensus 375 ~~PiVGVHIRRgDK~~-Ea~-------~~~~eeYm~~Ve~~~~~~p~-~r~IfLATDD~~Vi~eak-~Yp~y~f~~t~I~ 444 (516)
..|+|||||||||+.. +.. ..+++.|...+++...+.+. .++|||||||+.++++++ +||+ .+..+...
T Consensus 168 ~~~~VGVHIRrgD~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~vfvaSDd~~~~~~lk~~~~~-~~~~~~~~ 246 (330)
T 2hhc_A 168 GHSIIGVHVRHGNGEDIMEHAPYWADSELALHQVCMAIRKAKALSYPKPVKVFLCTDSAQVLDQVSGLFPD-VFAVPKRF 246 (330)
T ss_dssp TSEEEEEEECC------------CHHHHHHHHHHHHHHHHHHTSCCSSCEEEEEEESCHHHHHHHHHHSTT-EECCCC--
T ss_pred CCceEEEEEecCCCCcccccCcchHHHhHHHHHHHHHHHHHHhccCcCceEEEEEeCCHHHHHHHHHHcCC-ccccccee
Confidence 4689999999999753 211 12366777777776665553 579999999999999999 8998 43222211
Q ss_pred c--ccCCchhHHHhhhcCCcccchhHHHHHHHHhcCCceE--EcCCCcHHHHHHHHHhcc
Q 010181 445 R--QVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFI--GALGSTWCFLIDGMRNTG 500 (516)
Q Consensus 445 r--~~g~~s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfV--GT~SSnv~RLi~ELrqt~ 500 (516)
. ..+.+.. .+. ...+..++++|++|||.||++| ++ .|++|..++=|-...
T Consensus 247 ~~~~~~~~h~-~~~----~~~~~~~~~~Dm~LLS~cd~~I~~~~-~STFs~~aa~l~~~~ 300 (330)
T 2hhc_A 247 QADRAGPLHS-AEM----GIEGGASALIDMYLLARCATVIRFPP-TSAFTRYARLLVPRI 300 (330)
T ss_dssp ---------C-HHH----HHHHHHHHHHHHHHHTTCSEEEEEST-TCGGGHHHHHHCSEE
T ss_pred eccccccccc-Cch----hhccchHHHHHHHHHHcCCeeEECCC-CCCHHHHHHHhCCcc
Confidence 1 0011111 110 1234567899999999999999 55 999999999765543
No 3
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*
Probab=99.09 E-value=1.2e-09 Score=113.97 Aligned_cols=124 Identities=20% Similarity=0.307 Sum_probs=89.8
Q ss_pred CCCCeEEEEEcCCCccc--cccccCHHHHHHHHHHHHHhCCCCcEEEEeCC-ChHHHHHhh-cCCCceEEeeceecccCC
Q 010181 374 IPRPMLSMHVRMGDKAC--EMKVVEFEKYMLLADRIRKHFPHLNSIWLSTE-MQEVVDKSK-LYPHWNFYFTNVTRQVGN 449 (516)
Q Consensus 374 ~~~PiVGVHIRRgDK~~--Ea~~~~~eeYm~~Ve~~~~~~p~~r~IfLATD-D~~Vi~eak-~Yp~y~f~~t~I~r~~g~ 449 (516)
...|+++||+||||... ++.+-+++...+.+.+..+++ +++.|||||| ++..+++++ ..+...+. .. .
T Consensus 263 ~~~~y~~~H~Rr~d~~~~~~~~~ps~~~~~~~i~~~~~~~-~~~~VyiATD~~~~~~~~l~~~~~~~~~~-~~------~ 334 (408)
T 4ap5_A 263 LGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTH-RLDKVFVATDAVRKEYEELKKLLPEMVRF-EP------T 334 (408)
T ss_dssp CCEEEEEEEECCTTTTTTTCSSSCCHHHHHHHHHHHHHHH-TCSCEEEEECCCHHHHHHHHHHCTTEECC-CC------C
T ss_pred cCCCccccccccccchhhhhccCCCHHHHHHHHHHHHHhc-CCCEEEEeCCCchhHHHHHHHhCCCcEEe-cC------c
Confidence 45789999999999763 677778888888888777665 3457999999 456788888 56653321 11 0
Q ss_pred chhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhccC-Ccccceeecc
Q 010181 450 MTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVN 511 (516)
Q Consensus 450 ~s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~ELrqt~~-ka~~~F~Svd 511 (516)
.. .... -.++. -.++|.+++++|++||||.-|+|+..|.+.|...| ...++|-.+=
T Consensus 335 ~~--~~~~---~~d~~-~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~~~t~~~~c 391 (408)
T 4ap5_A 335 WE--ELEL---YKDGG-VAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFC 391 (408)
T ss_dssp HH--HHHH---HHHHH-HHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCGGGTSCBCC
T ss_pred ch--hhhc---cCcch-hhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCCCccccccC
Confidence 00 0000 11122 26899999999999999999999999999999998 5566776543
No 4
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=98.81 E-value=3.7e-09 Score=108.94 Aligned_cols=107 Identities=16% Similarity=0.347 Sum_probs=79.2
Q ss_pred CCCCeEEEEEcCC-C--ccccc-----------------------------cccCHHHHHHHHHHHHHhCCCCcEEEEeC
Q 010181 374 IPRPMLSMHVRMG-D--KACEM-----------------------------KVVEFEKYMLLADRIRKHFPHLNSIWLST 421 (516)
Q Consensus 374 ~~~PiVGVHIRRg-D--K~~Ea-----------------------------~~~~~eeYm~~Ve~~~~~~p~~r~IfLAT 421 (516)
+++|+||||+|+| | +++|+ =+-++++-.+.+++..+.. +++.|||||
T Consensus 209 L~rpyVgIHLR~G~DW~~aC~hlk~~~~~~lfaSPQC~Gy~~~~~~lt~emClPSle~I~rqIk~~vk~~-~lksVFIAT 287 (362)
T 3zy2_A 209 LAKPFVAVHLRNDADWVRVCEHIDTTTNRPLFASEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSI-GAKSVFVAS 287 (362)
T ss_dssp CCSSEEEEEECCCHHHHHHHHTCCTTTCCCCTTTHHHHCGGGTTCCCCHHHHSCCHHHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred cCCCeEEEEEecCCcHHHHHhhhccccCcccccCCcccCCcccCcccchhccCCCHHHHHHHHHHHHHhc-CCcEEEEec
Confidence 5789999999999 4 12221 1235677777777766654 688999999
Q ss_pred CChHHHHHhh-cCCCceEEeeceecccCCchhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhcc
Q 010181 422 EMQEVVDKSK-LYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTG 500 (516)
Q Consensus 422 DD~~Vi~eak-~Yp~y~f~~t~I~r~~g~~s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~ELrqt~ 500 (516)
|....++|++ ..+...+ .+.+... ..+++|+.++++||+||||-.|+++-.|.+.|...
T Consensus 288 Da~~~~~ELk~~L~~~~v---~vv~~~p-----------------e~a~ID~~I~~~A~~FIGN~~SSFSa~I~rERdi~ 347 (362)
T 3zy2_A 288 DKDHMIDEINEALKPYEI---EAHRQEP-----------------DDMYTSLAIMGRADLFVGNCVSTFSHIVKRERDHA 347 (362)
T ss_dssp SSCCCHHHHHHHHGGGTC---CEECCSS-----------------CCHHHHHHHHHHSSEEEECTTCHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhhccCc---eEEEeCC-----------------chhHHHHHHHHhCCEeecCccccccHHHHHHHHhc
Confidence 9988888887 3332111 1222110 15789999999999999999999999999999998
Q ss_pred C
Q 010181 501 G 501 (516)
Q Consensus 501 ~ 501 (516)
|
T Consensus 348 G 348 (362)
T 3zy2_A 348 G 348 (362)
T ss_dssp S
T ss_pred C
Confidence 8
No 5
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=50.61 E-value=66 Score=30.99 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCCeEEEEEcCCCccccccccCHHHHHHHHHHHHHhCCCCcEEEEeC--CChHHHHHhh-cCCC-ceEEeeceecccCCc
Q 010181 375 PRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLST--EMQEVVDKSK-LYPH-WNFYFTNVTRQVGNM 450 (516)
Q Consensus 375 ~~PiVGVHIRRgDK~~Ea~~~~~eeYm~~Ve~~~~~~p~~r~IfLAT--DD~~Vi~eak-~Yp~-y~f~~t~I~r~~g~~ 450 (516)
++|+|++|.-. ...+.+..+.+.|.+.++.+.+. +. +|+|.. +|....+++. ..+. .. ..+....|..
T Consensus 179 ~~~~i~l~pga--~~~~~k~wp~~~~~~l~~~L~~~--~~-~vvl~g~~~e~~~~~~i~~~~~~~~~---~~~~~l~g~~ 250 (348)
T 1psw_A 179 ERPMIGFCPGA--EFGPAKRWPHYHYAELAKQLIDE--GY-QVVLFGSAKDHEAGNEILAALNTEQQ---AWCRNLAGET 250 (348)
T ss_dssp SSCEEEEECCC--TTCGGGSCCHHHHHHHHHHHHHT--TC-EEEECCCGGGHHHHHHHHTTSCHHHH---TTEEECTTTS
T ss_pred CCcEEEEECCC--CccccCCCCHHHHHHHHHHHHHC--CC-eEEEEeChhhHHHHHHHHHhhhhccc---cceEeccCcC
Confidence 57899999833 12356778889999999888665 44 344432 3334444444 2221 00 0011111222
Q ss_pred hhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHH
Q 010181 451 TMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGM 496 (516)
Q Consensus 451 s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~EL 496 (516)
++. -=..+++.||.+||. .|..-.|+.-+
T Consensus 251 -------------sl~---e~~ali~~a~l~I~~-Dsg~~HlAaa~ 279 (348)
T 1psw_A 251 -------------QLD---QAVILIAACKAIVTN-DSGLMHVAAAL 279 (348)
T ss_dssp -------------CHH---HHHHHHHTSSEEEEE-SSHHHHHHHHT
T ss_pred -------------CHH---HHHHHHHhCCEEEec-CCHHHHHHHHc
Confidence 211 223689999999997 68888886653
No 6
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=50.26 E-value=10 Score=38.36 Aligned_cols=102 Identities=9% Similarity=0.050 Sum_probs=62.0
Q ss_pred CCCeEEEEEcCCCccccccccCHHHHHHHHHHHHHhCCCC-cEEEEeCCChHHHHHhhcCCCceEEeeceecccC--Cch
Q 010181 375 PRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHL-NSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVG--NMT 451 (516)
Q Consensus 375 ~~PiVGVHIRRgDK~~Ea~~~~~eeYm~~Ve~~~~~~p~~-r~IfLATDD~~Vi~eak~Yp~y~f~~t~I~r~~g--~~s 451 (516)
...+||+=|=-+-|-. .-++.+++-|++++. ++. ...||-||+++.+.....=|..++..-.|.+..+ ..+
T Consensus 56 ~n~tIGl~vfA~GkY~----~fl~~Fl~SAek~Fm--~g~~V~YYVFTD~~~~vP~v~l~~~r~~~V~~v~~~~~Wqd~s 129 (298)
T 3ioh_A 56 QNTTIGLTVFAIKKYV----AFLKLFLETAEKHFM--VGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVS 129 (298)
T ss_dssp TTCEEEEEEEECGGGG----GGHHHHHHHHHHHBS--TTSEEEEEEEESCGGGSCCCCCCTTEEEEEEECCCCSSHHHHH
T ss_pred hCCcEEEEEEEeCcHH----HHHHHHHHhHHHhcc--CCceEEEEEEeCChhhCCccccCCCCeEEEEEeccccCCcccc
Confidence 3568888774444433 256778888887754 333 3899999999988766655666664322322212 223
Q ss_pred hHHHhhhcCCcccchhHHHHHHHHhcCCceEEc-----CCCcHH
Q 010181 452 MAIYEASLGRETSTNYPLVNFLMATDSDFFIGA-----LGSTWC 490 (516)
Q Consensus 452 ~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT-----~SSnv~ 490 (516)
+... .+..-+..-.++.|+||++|- |.+.||
T Consensus 130 m~Rm--------~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG 165 (298)
T 3ioh_A 130 MRRM--------EMISDFCERRFLSEVDYLVCVDVDMEFRDHVG 165 (298)
T ss_dssp HHHH--------HHHHHHHHHTHHHHCSEEEEEESSEEECSCBC
T ss_pred HHHH--------HHHHHHHHHHHhhcCCEEEEecCCCeeccCcc
Confidence 3222 112223445689999999997 666655
No 7
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=46.78 E-value=14 Score=37.12 Aligned_cols=100 Identities=10% Similarity=0.093 Sum_probs=55.5
Q ss_pred CCeEEEEEcCCCccccccccCHHHHHHHHHHHHHhCCCCcEEEEeCCChHHHHHhhcCCCceEEeeceecccC--CchhH
Q 010181 376 RPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVG--NMTMA 453 (516)
Q Consensus 376 ~PiVGVHIRRgDK~~Ea~~~~~eeYm~~Ve~~~~~~p~~r~IfLATDD~~Vi~eak~Yp~y~f~~t~I~r~~g--~~s~~ 453 (516)
.-.||+=|=-+-|-.| .-++++++-||+++...- ..+.||-||+++.+.....-|..++..-.|....+ ..++.
T Consensus 47 n~tIGl~vfa~GkY~~---~fl~~Fl~SAEk~Fm~g~-~v~YYVFTD~~~~~p~v~l~~~r~~~V~~i~~~~~W~d~sm~ 122 (289)
T 1o7q_A 47 KITVGLTVFAVGRYIE---HYLEEFLTSANKHFMVGH-PVIFYIMVDDVSRMPLIELGPLRSFKVFKIKPEKRWQDISMM 122 (289)
T ss_dssp TCCEEEEEEECTTHHH---HHHHHHHHHHHHHBSTTS-CEEEEEEESCGGGCCCCCCCTTEEEEEEECCCCSSHHHHHHH
T ss_pred CCeEEEEEEEecccHH---HHHHHHHHHHHHhccCCC-eEEEEEEeCChhhCCccccCCCCeEEEEEeccccCCchhHHH
Confidence 3467776633222211 234556666666543322 23899999999988877766776664333433222 12222
Q ss_pred HHhhhcCCcccchhHHHH---HHHHhcCCceEEc-----CCCcHH
Q 010181 454 IYEASLGRETSTNYPLVN---FLMATDSDFFIGA-----LGSTWC 490 (516)
Q Consensus 454 ~~~~~~gs~~sl~~~lvD---l~lLsecDyfVGT-----~SSnv~ 490 (516)
.. ..|.+ =.++.++||++|- |.+.||
T Consensus 123 Rm-----------~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG 156 (289)
T 1o7q_A 123 RM-----------KTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFG 156 (289)
T ss_dssp HH-----------HHHHHHHHHTHHHHCSEEEEECSSEEECSCBC
T ss_pred HH-----------HHHHHHHHHHHhhcCCEEEEeeCCcEeeccCC
Confidence 21 12333 3568899999986 555554
No 8
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=38.96 E-value=1.2e+02 Score=30.14 Aligned_cols=93 Identities=10% Similarity=0.040 Sum_probs=56.9
Q ss_pred CCCeEEEEEcCCCccccccccCHHHHHHHHHHHHHhCCCCcEEEEeC-CChHHHHHhh-cCCCceEEeeceecccCCchh
Q 010181 375 PRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLST-EMQEVVDKSK-LYPHWNFYFTNVTRQVGNMTM 452 (516)
Q Consensus 375 ~~PiVGVHIRRgDK~~Ea~~~~~eeYm~~Ve~~~~~~p~~r~IfLAT-DD~~Vi~eak-~Yp~y~f~~t~I~r~~g~~s~ 452 (516)
..|+|+||...+. ..+.-+.+.|.+.++.+.+. +.+-|++.+ +|.+..+++. ..+.-.+ ...|..+.
T Consensus 184 ~~~~i~i~pga~~---~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~------~l~g~~sl 252 (349)
T 3tov_A 184 TDILIGFNIGSAV---PEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPI------VATGKFQL 252 (349)
T ss_dssp TCCEEEEECCCSS---GGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCE------ECTTCCCH
T ss_pred CCCEEEEeCCCCC---ccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccE------EeeCCCCH
Confidence 5789999997553 36678889999999988766 443344333 4445555554 3332111 11122222
Q ss_pred HHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHH
Q 010181 453 AIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDG 495 (516)
Q Consensus 453 ~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~E 495 (516)
--=+.+++.||.+||. -|....|+.-
T Consensus 253 ----------------~e~~ali~~a~~~i~~-DsG~~HlAaa 278 (349)
T 3tov_A 253 ----------------GPLAAAMNRCNLLITN-DSGPMHVGIS 278 (349)
T ss_dssp ----------------HHHHHHHHTCSEEEEE-SSHHHHHHHT
T ss_pred ----------------HHHHHHHHhCCEEEEC-CCCHHHHHHh
Confidence 1234578999999997 6777777654
No 9
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=30.72 E-value=1.1e+02 Score=29.46 Aligned_cols=91 Identities=11% Similarity=0.076 Sum_probs=56.5
Q ss_pred CCCeEEEEEcCCCccccccccCHHHHHHHHHHHHHhCCCCcEEEEe-C--CChHHHHHhh-cCCCceEEeeceecccCCc
Q 010181 375 PRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLS-T--EMQEVVDKSK-LYPHWNFYFTNVTRQVGNM 450 (516)
Q Consensus 375 ~~PiVGVHIRRgDK~~Ea~~~~~eeYm~~Ve~~~~~~p~~r~IfLA-T--DD~~Vi~eak-~Yp~y~f~~t~I~r~~g~~ 450 (516)
+.|+|+||.-.+. ..+.-+.+.|.+.++.+.+. +. +|+|. . +|....+++. ..++.. + .|..
T Consensus 177 ~~~~i~l~pga~~---~~k~wp~~~~~~l~~~L~~~--~~-~vvl~~g~~~e~~~~~~i~~~~~~~~-----l---~g~~ 242 (326)
T 2gt1_A 177 AGEYAVFLHATTR---DDKHWPEEHWRELIGLLADS--GI-RIKLPWGAPHEEERAKRLAEGFAYVE-----V---LPKM 242 (326)
T ss_dssp TTSEEEEECCCSS---GGGSCCHHHHHHHHHHTTTT--CC-EEEECCSSHHHHHHHHHHHTTCTTEE-----E---CCCC
T ss_pred CCCEEEEEeCCCC---ccccCCHHHHHHHHHHHHHC--CC-cEEEecCCHHHHHHHHHHHhhCCccc-----c---cCCC
Confidence 5789999984432 45778888999998877542 44 45553 2 2444555555 345421 1 1222
Q ss_pred hhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHH
Q 010181 451 TMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGM 496 (516)
Q Consensus 451 s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~EL 496 (516)
+.. -=..+++.||.+||. -|....|+.-+
T Consensus 243 sl~----------------el~ali~~a~l~I~~-DSG~~HlAaa~ 271 (326)
T 2gt1_A 243 SLE----------------GVARVLAGAKFVVSV-DTGLSHLTAAL 271 (326)
T ss_dssp CHH----------------HHHHHHHTCSEEEEE-SSHHHHHHHHT
T ss_pred CHH----------------HHHHHHHhCCEEEec-CCcHHHHHHHc
Confidence 221 224689999999998 67788887654
No 10
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=17.45 E-value=68 Score=33.24 Aligned_cols=58 Identities=19% Similarity=0.146 Sum_probs=36.5
Q ss_pred ceEEEeecCCCCcchhHHHHHHHHHHHHHHhcCcEEEEeCCCCcCCCCCCCCCCCCCccccccCC
Q 010181 169 RFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPET 233 (516)
Q Consensus 169 K~Lvc~~~~~cGfGcg~H~~~~C~~l~~A~~t~RtLIld~~~~~~~~Gc~~~~~~~Wsc~F~p~s 233 (516)
-.|.|.=. ..||=|+.|. -+.|+.|-+.|||||+-+ |..|+--. +..-.++.||.-.+
T Consensus 10 yi~yCPCM--GRFGNQadhf--LG~LafAk~lnRTLvlPp--wi~y~~~~-~~~vpf~~yF~v~~ 67 (362)
T 3zy2_A 10 YIVFCPCM--GRFGNQVDQF--LGVLAFAKALDRTLVLPN--FIEFKHPE-TKMIPFEFLFQVGT 67 (362)
T ss_dssp EEEECCCS--SSHHHHHHHH--HHHHHHHHHHTCEEECCC--EEECSSSS-CEEECHHHHBCHHH
T ss_pred cEEeCCCc--CccccHHHHH--HHHHHHHHhhCceEecCc--cccccCCc-ccccchhheeecch
Confidence 45667521 2799999887 456669999999999964 23222111 23345777776543
Done!