Query 010183
Match_columns 516
No_of_seqs 302 out of 1629
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 22:01:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010183.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010183hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 2E-115 4E-120 896.1 36.8 507 5-516 8-516 (571)
2 COG1621 SacC Beta-fructosidase 100.0 3.7E-90 8E-95 728.5 40.0 403 39-516 22-438 (486)
3 smart00640 Glyco_32 Glycosyl h 100.0 9.1E-84 2E-88 688.2 47.0 411 50-516 1-426 (437)
4 TIGR01322 scrB_fam sucrose-6-p 100.0 1.6E-83 3.4E-88 688.1 43.8 395 40-516 8-423 (445)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 3.8E-78 8.3E-83 617.7 26.3 300 50-369 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 5.5E-69 1.2E-73 546.7 34.2 286 56-372 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 1.4E-56 3E-61 452.0 29.8 267 59-363 1-279 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 2E-39 4.4E-44 324.1 27.5 242 60-335 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 6.2E-37 1.4E-41 306.5 26.7 270 59-357 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 100.0 2E-26 4.3E-31 237.0 30.0 272 60-362 9-345 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 6.5E-23 1.4E-27 207.9 19.5 191 49-248 4-282 (291)
12 cd08993 GH43_DUF377 Glycosyl h 99.8 5.1E-20 1.1E-24 184.9 19.6 158 60-241 2-167 (268)
13 cd08984 GH43_5 Glycosyl hydrol 99.8 3.1E-19 6.7E-24 181.7 21.5 162 58-248 79-246 (294)
14 cd09004 GH43_bXyl Glycosyl hyd 99.8 3.9E-19 8.4E-24 179.0 20.4 191 55-283 5-197 (275)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 1.7E-17 3.6E-22 167.6 21.5 195 56-283 6-211 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 3.5E-16 7.5E-21 157.5 20.1 195 60-283 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 3.5E-15 7.6E-20 148.5 19.9 192 60-284 2-202 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.6 1.7E-14 3.6E-19 146.6 20.8 180 60-274 2-204 (294)
19 cd08992 GH43_like_1 Glycosyl h 99.6 1.4E-14 3E-19 149.4 17.7 179 46-232 24-248 (349)
20 cd08998 GH43_ABN_1 Glycosyl hy 99.6 1.2E-13 2.7E-18 140.0 19.9 190 58-284 1-206 (288)
21 cd08984 GH43_5 Glycosyl hydrol 99.6 1.7E-13 3.7E-18 139.6 19.9 169 58-248 11-193 (294)
22 cd08985 GH43_6 Glycosyl hydrol 99.5 3.7E-12 8E-17 128.0 24.2 197 59-293 4-210 (265)
23 PF04041 DUF377: Domain of unk 99.5 5.6E-13 1.2E-17 136.8 13.0 164 60-241 34-201 (312)
24 cd09000 GH43_XYL_1 Glycosyl hy 99.4 9E-12 2E-16 126.4 18.9 179 56-274 6-197 (288)
25 cd09003 GH43_AXH_1 Glycosyl hy 99.4 1.9E-11 4.2E-16 125.6 19.8 187 56-273 7-215 (311)
26 cd08983 GH43_4 Glycosyl hydrol 99.4 5.9E-11 1.3E-15 120.0 22.5 185 55-273 15-207 (276)
27 PF04616 Glyco_hydro_43: Glyco 99.3 6.2E-11 1.3E-15 119.4 19.1 183 56-274 8-200 (286)
28 cd08979 GH_J Glycosyl hydrolas 99.3 4.2E-11 9E-16 119.6 16.3 137 56-205 64-209 (276)
29 cd08992 GH43_like_1 Glycosyl h 99.3 2.9E-10 6.2E-15 117.6 19.4 169 59-248 113-310 (349)
30 cd08981 GH43_2 Glycosyl hydrol 99.3 4.2E-10 9.1E-15 114.6 20.2 135 56-204 4-142 (291)
31 cd08988 GH43_ABN Glycosyl hydr 99.2 6.2E-10 1.4E-14 112.6 20.4 179 60-273 2-193 (279)
32 cd08989 GH43_XYL Glycosyl hydr 99.1 4.9E-09 1.1E-13 105.5 19.5 176 56-274 6-190 (269)
33 cd08986 GH43_7 Glycosyl hydrol 99.1 3.4E-09 7.3E-14 106.8 18.3 179 57-273 1-202 (269)
34 cd09001 GH43_XYL_2 Glycosyl hy 99.1 6.9E-09 1.5E-13 104.5 18.6 170 56-274 9-192 (269)
35 cd08980 GH43_1 Glycosyl hydrol 99.0 1.2E-08 2.5E-13 103.6 18.3 190 60-284 2-205 (288)
36 cd08993 GH43_DUF377 Glycosyl h 99.0 5.3E-09 1.2E-13 105.0 14.1 99 121-228 3-103 (268)
37 COG2152 Predicted glycosylase 99.0 9E-09 2E-13 102.7 15.3 155 59-232 32-194 (314)
38 cd09002 GH43_XYL_3 Glycosyl hy 99.0 2.3E-08 4.9E-13 101.4 17.6 170 57-274 14-191 (280)
39 PF02435 Glyco_hydro_68: Levan 98.9 4.2E-08 9.1E-13 102.9 16.2 203 51-272 49-318 (428)
40 cd08982 GH43_3 Glycosyl hydrol 98.8 1.7E-07 3.6E-12 95.8 18.6 170 59-284 4-191 (295)
41 cd08987 GH62 Glycosyl hydrolas 98.8 4.9E-07 1.1E-11 90.6 17.9 191 51-283 14-217 (303)
42 cd08994 GH43_like_2 Glycosyl h 98.7 1.2E-07 2.5E-12 96.3 12.6 108 59-171 81-198 (291)
43 cd08995 GH32_Aec43_like Glycos 98.7 4.9E-07 1.1E-11 91.2 16.3 133 58-206 62-201 (280)
44 cd08991 GH43_bXyl_2 Glycosyl h 98.5 1.3E-05 2.8E-10 81.4 21.0 157 56-226 53-227 (294)
45 cd08990 GH43_AXH_like Glycosyl 98.5 7.9E-06 1.7E-10 82.3 19.3 155 55-230 61-220 (274)
46 cd08978 GH_F Glycosyl hydrolas 98.5 5.1E-06 1.1E-10 82.6 16.3 156 55-226 56-215 (271)
47 cd08999 GH43_ABN_2 Glycosyl hy 98.5 5.5E-06 1.2E-10 83.6 16.6 154 58-227 62-226 (287)
48 PF04041 DUF377: Domain of unk 98.4 2.9E-06 6.4E-11 87.3 13.7 104 115-228 29-134 (312)
49 cd08983 GH43_4 Glycosyl hydrol 98.4 1.4E-06 3E-11 88.3 9.7 89 167-273 5-99 (276)
50 cd08986 GH43_7 Glycosyl hydrol 98.4 3.3E-06 7.2E-11 85.1 12.4 121 184-329 2-147 (269)
51 cd08772 GH43_62_32_68 Glycosyl 98.3 1.5E-05 3.3E-10 79.5 16.3 156 56-226 58-224 (286)
52 PF08244 Glyco_hydro_32C: Glyc 98.3 9.6E-07 2.1E-11 73.3 5.8 64 444-516 9-75 (86)
53 cd08989 GH43_XYL Glycosyl hydr 98.3 1.2E-05 2.7E-10 80.9 13.7 78 168-273 1-87 (269)
54 cd09002 GH43_XYL_3 Glycosyl hy 98.2 3E-05 6.5E-10 78.6 14.6 78 167-273 7-84 (280)
55 cd08996 GH32_B_Fructosidase Gl 98.2 1.8E-05 4E-10 80.4 12.8 132 60-206 65-202 (298)
56 cd08981 GH43_2 Glycosyl hydrol 98.1 3.6E-05 7.9E-10 78.5 14.1 78 182-274 4-88 (291)
57 cd08998 GH43_ABN_1 Glycosyl hy 98.1 6.7E-05 1.5E-09 76.1 15.7 154 55-224 55-217 (288)
58 cd09004 GH43_bXyl Glycosyl hyd 97.9 0.00051 1.1E-08 69.2 17.8 141 58-227 66-212 (275)
59 TIGR01322 scrB_fam sucrose-6-p 97.9 0.00011 2.4E-09 79.4 13.2 135 60-205 88-225 (445)
60 cd08997 GH68 Glycosyl hydrolas 97.9 0.00033 7.1E-09 73.0 15.6 154 61-225 74-284 (349)
61 cd08985 GH43_6 Glycosyl hydrol 97.8 0.0023 5E-08 64.4 18.7 147 56-228 63-214 (265)
62 COG3507 XynB Beta-xylosidase [ 97.7 0.00066 1.4E-08 73.4 14.1 141 90-248 56-215 (549)
63 smart00640 Glyco_32 Glycosyl h 97.7 0.00029 6.2E-09 76.0 11.5 131 64-205 74-215 (437)
64 COG2152 Predicted glycosylase 97.6 0.00044 9.5E-09 69.6 11.4 114 105-229 12-138 (314)
65 PF04616 Glyco_hydro_43: Glyco 97.5 0.0005 1.1E-08 69.1 10.5 156 43-206 104-261 (286)
66 cd08988 GH43_ABN Glycosyl hydr 97.5 0.0038 8.3E-08 63.1 16.5 150 58-225 57-219 (279)
67 cd09003 GH43_AXH_1 Glycosyl hy 97.5 0.0074 1.6E-07 62.2 18.4 149 59-230 79-248 (311)
68 cd09001 GH43_XYL_2 Glycosyl hy 97.4 0.0038 8.3E-08 62.8 14.9 134 58-225 76-212 (269)
69 cd08980 GH43_1 Glycosyl hydrol 97.4 0.0038 8.2E-08 63.3 14.5 146 53-204 108-259 (288)
70 cd00260 Sialidase Sialidases o 97.3 0.0073 1.6E-07 62.7 15.9 165 43-226 58-238 (351)
71 PF03664 Glyco_hydro_62: Glyco 97.2 0.027 5.8E-07 55.2 17.3 185 51-274 16-208 (271)
72 PF13088 BNR_2: BNR repeat-lik 97.2 0.0027 5.9E-08 63.4 10.7 147 58-225 48-198 (275)
73 cd09000 GH43_XYL_1 Glycosyl hy 97.1 0.0025 5.4E-08 64.7 10.2 74 183-274 7-88 (288)
74 cd08982 GH43_3 Glycosyl hydrol 96.6 0.027 5.8E-07 57.6 12.9 136 54-203 87-238 (295)
75 PF00251 Glyco_hydro_32N: Glyc 96.3 0.069 1.5E-06 54.9 13.2 124 124-272 15-148 (308)
76 cd08987 GH62 Glycosyl hydrolas 96.2 0.16 3.5E-06 51.6 14.7 144 58-226 78-230 (303)
77 PF13088 BNR_2: BNR repeat-lik 96.0 0.08 1.7E-06 52.8 12.1 161 69-248 1-168 (275)
78 cd00260 Sialidase Sialidases o 94.6 6.5 0.00014 40.7 21.2 149 86-248 45-207 (351)
79 PF13859 BNR_3: BNR repeat-lik 93.1 1.1 2.3E-05 46.3 11.8 146 60-230 62-216 (310)
80 PF13810 DUF4185: Domain of un 90.7 21 0.00046 37.0 18.0 153 59-225 95-271 (316)
81 COG3507 XynB Beta-xylosidase [ 89.3 1.8 3.9E-05 47.5 9.1 54 167-232 22-75 (549)
82 COG3940 Predicted beta-xylosid 84.6 5.7 0.00012 38.6 8.6 106 64-174 137-249 (324)
83 PTZ00334 trans-sialidase; Prov 84.1 18 0.00038 41.9 13.8 150 58-230 179-353 (780)
84 COG1621 SacC Beta-fructosidase 81.1 19 0.00042 39.5 12.2 99 125-233 48-154 (486)
85 PF02435 Glyco_hydro_68: Levan 73.0 46 0.00099 35.9 11.9 128 68-206 143-320 (428)
86 KOG0228 Beta-fructofuranosidas 65.6 43 0.00093 36.7 9.8 92 126-227 67-167 (571)
87 PF13810 DUF4185: Domain of un 63.2 34 0.00073 35.5 8.4 95 125-227 101-210 (316)
88 COG3940 Predicted beta-xylosid 34.6 4.6E+02 0.0099 25.8 13.2 161 53-231 65-246 (324)
89 PF03664 Glyco_hydro_62: Glyco 32.9 1.7E+02 0.0036 29.3 7.2 113 98-232 7-123 (271)
90 PLN03207 stomagen; Provisional 24.2 48 0.0011 28.2 1.6 15 8-22 16-30 (113)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-115 Score=896.08 Aligned_cols=507 Identities=60% Similarity=1.055 Sum_probs=474.8
Q ss_pred hHHHHHHHHHHHhhceeeeccccccccCcccc-CCCCCCCCCCcceeccCCCCCccCCccEEEECCEEEEEeeeCCCCCC
Q 010183 5 YLSLFLFFALFLGHGVVELQASHHVYRNLQTS-QSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAV 83 (516)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Rp~~H~~p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~ 83 (516)
-++|+|+..+++.+.|..+.+.|..+..|+.. ++...+.++||.|||+|++|||||| +|++|+|||||||||+++.
T Consensus 8 ~~~l~l~~~~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gav 84 (571)
T KOG0228|consen 8 LVLLLLLVTLNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAV 84 (571)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCce
Confidence 35667777888999888889999999888664 3456778999999999999999999 8999999999999999999
Q ss_pred CCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEE
Q 010183 84 WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWV 163 (516)
Q Consensus 84 wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~ 163 (516)
||+++||||+|+|||||+.+|+||.|++++|..|||||||+++++|++++||||.+.+.+|.|.+|++.|.+||.|++|.
T Consensus 85 wg~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~ 164 (571)
T KOG0228|consen 85 WGNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWS 164 (571)
T ss_pred eeeeEeeeecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheee
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred ecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeeeccccCCCCCceecCc
Q 010183 164 KSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPD 243 (516)
Q Consensus 164 k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPd 243 (516)
|.++||++.++.-.+++...||||+++|.+++|+|+|++|+..+++|.+.+|+|+|+++|+..+.|++....++||||||
T Consensus 165 k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPd 244 (571)
T KOG0228|consen 165 KDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPD 244 (571)
T ss_pred cCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCC
Confidence 99999999765223567789999999999999999999999988899999999999999999989999988999999999
Q ss_pred eEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeEEEEEEeCCCCeeecCCCCCCCCCceecccCCCccceeEecCCC
Q 010183 244 FFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAK 323 (516)
Q Consensus 244 lf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~fYA~~t~~d~~~ 323 (516)
|||+.++|++|++.+..+...|||+++|..+++.++|+||+||+++.+|+||..+.+.....+.|||.|||+|||.|..+
T Consensus 245 ffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~ 324 (571)
T KOG0228|consen 245 FFPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVK 324 (571)
T ss_pred cEEecccCCCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccC
Confidence 99999999999999988888899999999988999999999999999999998877766678899999999999999989
Q ss_pred CcEEEEEeccCCCCCCCCCCCCccccccccEEEEEec-CCCeEEecchHHHHHhhhcceeccceEecCCceEEEcccccc
Q 010183 324 NRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAA 402 (516)
Q Consensus 324 gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~~~~~~~~ 402 (516)
+|||+|||++|+++.+++..+||+|+|+|||+++|++ .|++|.|+|++|++.||...+...+..+++|...++.++++.
T Consensus 325 ~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~ 404 (571)
T KOG0228|consen 325 GRRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAA 404 (571)
T ss_pred CcEEEEEecccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccc
Confidence 9999999999999999999999999999999999998 788999999999999999999888888999999999999999
Q ss_pred ccceEEEEEecccccccccCCCCCCccccccccCccccCCCcceEEEEEEcCCCceeEEEEEEEEeCCCCceEEEEEecC
Q 010183 403 QADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQ 482 (516)
Q Consensus 403 ~~dle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gl~v~~s~~~~e~T~i~~~~~~~~~~~~~~~~~~Dr 482 (516)
|+|+|++|++.+++++..+++.+++++..|..++..+.++.|||||.++|+.|++|+|.++|++.+.. .+..++||.|.
T Consensus 405 q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~-~~~~v~~csd~ 483 (571)
T KOG0228|consen 405 QADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAK-KKYVVLMCSDQ 483 (571)
T ss_pred cccceEEEEecccccccccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecC-CcceeEEeccC
Confidence 99999999998899998899999889999998889999999999999999999999999999999877 46788999999
Q ss_pred CCCCCCCCCCCCeeeEEEEEcCCCCeEEEEEeeC
Q 010183 483 SRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLVS 516 (516)
Q Consensus 483 ~~Ss~~~~~~~~~~~g~~~~~~~~~~l~LRilvD 516 (516)
++||+..+.+|+.++++++|++ .++|+||+|||
T Consensus 484 ~~sSl~~d~~k~~~~afvdv~~-~~~islr~LiD 516 (571)
T KOG0228|consen 484 SRSSLAEDNYKPSIGAFVDVYP-HQKISLRSLID 516 (571)
T ss_pred CCccccccccccceeeEEEecC-CCccchhhhhh
Confidence 9999999999999999999988 88999999998
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-90 Score=728.54 Aligned_cols=403 Identities=31% Similarity=0.557 Sum_probs=319.0
Q ss_pred CCCCCCCCcceeccCCCCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCe
Q 010183 39 TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (516)
Q Consensus 39 ~~~~~~~Rp~~H~~p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv 118 (516)
....++|||.|||+||.||||||||++|++|+|||||||||+++.||+||||||+|+|||||+++|+||+|++++|.+||
T Consensus 22 ~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ 101 (486)
T COG1621 22 SVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGC 101 (486)
T ss_pred hccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCc
Confidence 55668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCceEEEEcccCC----CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCC
Q 010183 119 WSGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194 (516)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~ 194 (516)
||||||+ .+|...+||||+.+ .+.+.||||+|+|+ .+|+|+.+|||+..| +++ +.+||||||+|+ +
T Consensus 102 ySGSAV~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p--~~~-t~hFRDPKv~w~-~ 171 (486)
T COG1621 102 YSGSAVV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQP--EGY-TPHFRDPKVVWD-E 171 (486)
T ss_pred eeeeEEE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCC--Ccc-cccCCCCccccc-C
Confidence 9999986 58889999999765 36789999999995 578997788999888 665 889999999998 6
Q ss_pred CCeEEEEEeeee-CCccEEEEEEcCCCCCcEEeeecccc-CCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEee
Q 010183 195 DKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (516)
Q Consensus 195 ~g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~ 272 (516)
+++|||++||+. +..|+|+||+|+||++|++.+++... ...++||||||||+|+ ++..+ .+|++.++.
T Consensus 172 ~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~--------~~~pqg~~~ 241 (486)
T COG1621 172 GGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVL--------LFWPQGLSI 241 (486)
T ss_pred CCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCce--------EEcceeeec
Confidence 889999999987 45789999999999999999876655 3456799999999999 43222 367777765
Q ss_pred CC-----CCceeEEEEEEeCCCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCC--CCCCCC
Q 010183 273 DD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV--NDDVKK 344 (516)
Q Consensus 273 ~~-----~~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~--~~~~~~ 344 (516)
++ .....|++|+||++ +|.+... .+++||+|+ |||+|||.++ +||||++|||++|+.. .++...
T Consensus 242 ~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~ 313 (486)
T COG1621 242 NGGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDE 313 (486)
T ss_pred CCCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCcccc
Confidence 44 23478999999985 6766543 378999999 9999999985 7999999999999987 566678
Q ss_pred CccccccccEEEEEecCCCeEEecchHHHHHhhhcceeccceEecCCceEEEccccccccceEEEEEecccccccccCCC
Q 010183 345 GWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPG 424 (516)
Q Consensus 345 gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~~~~~~~~~~dle~~~~~~~~~~~~~~~~~ 424 (516)
||+|||||||||+|+ +| +|+|+||+||++||.++....+..+.+. ..+....+.+.++++.+...
T Consensus 314 ~w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~----------- 378 (486)
T COG1621 314 GWRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT----------- 378 (486)
T ss_pred CcCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc-----------
Confidence 999999999999996 45 7999999999999998766666666554 23333344444443222110
Q ss_pred CCCccccccccCccccCCCcceEEEEEEcCCCceeEEEEEEEEeCCCCceEEEEEecCCCCCCCCCCCCCeeeEEEEEcC
Q 010183 425 WTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDP 504 (516)
Q Consensus 425 ~~~~~~~~~~~~~~~~g~~~~~gl~v~~s~~~~e~T~i~~~~~~~~~~~~~~~~~~Dr~~Ss~~~~~~~~~~~g~~~~~~ 504 (516)
....+|+.++.+.. .|.++... ..+++||++| ..............++
T Consensus 379 -----------------~~~~~~~~l~~~~~-----~~~~~~~~-------~~l~ldR~~s--~~f~~~~~~~r~~~~~- 426 (486)
T COG1621 379 -----------------DATSFGLELRMGLN-----LVGYDVEN-------ETLTLDRSDS--PLFTVQDGETRECFIE- 426 (486)
T ss_pred -----------------ccceEEEEeecCcc-----eecccccc-------ceEEEecccc--ccccccCCceeeeccC-
Confidence 01258888766543 45554432 2368899999 1121122222333332
Q ss_pred CCCeEEEEEeeC
Q 010183 505 VYEKLSLRSLVS 516 (516)
Q Consensus 505 ~~~~l~LRilvD 516 (516)
...+++||||||
T Consensus 427 ~~~~v~l~if~D 438 (486)
T COG1621 427 NGAKVHLRIFVD 438 (486)
T ss_pred CCceEEEEEEEe
Confidence 234589999998
No 3
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=9.1e-84 Score=688.19 Aligned_cols=411 Identities=47% Similarity=0.853 Sum_probs=314.4
Q ss_pred eccCCCCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010183 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (516)
Q Consensus 50 H~~p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg 129 (516)
||+|+.||||||||++|++|+|||||||+|.++.||+|+||||+|+|||||+++|+||.|+..+|+.|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 467
Q ss_pred ceEEEEcccCCC------CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEe
Q 010183 130 KPAIFYTGIDPH------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (516)
Q Consensus 130 ~~~l~YTg~~~~------~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~g 203 (516)
++++||||.... ..+.|.+|.+.+. +++|+|+++||||.++ ++....+||||+|+|+ ++++|||++|
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d----~~~w~k~~~~Pvi~~~--p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL----GGTWTKYPGNPVLVPP--PGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC----CCeeEECCCCcEEeCC--CCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 799999997421 2344444444332 4899999889999766 5556789999998887 3479999999
Q ss_pred eee-CCccEEEEEEcCCCCCcEEeeecccc--CCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeE
Q 010183 204 SKI-NRKGLAILYRSKDFVHWIKAKHPLHS--VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280 (516)
Q Consensus 204 a~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y 280 (516)
++. ++.|+|+||+|+||++|++.+.++.. ...+.||||||||+|+.+| ...||||++|+++.....|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999998765443 2235799999999998443 2359999999987667899
Q ss_pred EEEEEeCCCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCCC-CCCCCCccccccccEEEEE
Q 010183 281 TVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVN-DDVKKGWAGIQAIPRKLWL 358 (516)
Q Consensus 281 ~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~~-~~~~~gW~g~lslPReL~l 358 (516)
++|.|++. .+|+|+.... .....++|+|+ |||+|||.+++.+|||+||||++++... .....||+|+|||||||+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999873 5799876431 12245899998 9999999987556999999999997422 2223899999999999999
Q ss_pred e-cCCCeEEecchHHHHHhhhcceeccceEecCCceEEEcc--ccccccceEEEEEecccccccccCCCCCCcccccccc
Q 010183 359 D-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTG--VTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQK 435 (516)
Q Consensus 359 ~-~~g~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~~~~--~~~~~~dle~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (516)
+ ++| +|+|+||+||++||.. .......+..+....+.. ..+.+++|+++|+... .
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~--------------------~ 358 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS--------------------G 358 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEEEeCC--------------------C
Confidence 6 555 7999999999999954 223333443333222222 2344566666655420 0
Q ss_pred CccccCCCcceEEEEEEcCCCceeEEEEEEEEeCCCCceEEEEEecCCCCCCCCC-CCCCeeeEEEEEcCCCCeEEEEEe
Q 010183 436 GASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSSLNSD-NDKTTYGAFLNVDPVYEKLSLRSL 514 (516)
Q Consensus 436 ~~~~~g~~~~~gl~v~~s~~~~e~T~i~~~~~~~~~~~~~~~~~~Dr~~Ss~~~~-~~~~~~~g~~~~~~~~~~l~LRil 514 (516)
. ..+|||.++++++.+|.|.|.|+.... .+++||++|+.... ...+.....+.+.. .++++||||
T Consensus 359 ~------~~~~~l~~~~~~~~~~~~~i~~~~~~~-------~l~vdR~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lri~ 424 (437)
T smart00640 359 G------AGPFGLLVLASEDLSEQTAVYFDVSKG-------TLCLDRRSSGTSNDEVFKGVRGATVPVDP-GETLSLRIL 424 (437)
T ss_pred c------ceeEEEEEEeCCCCCceEEEEEEcCCe-------EEEEecCCCCCCcccccccceeeeeecCC-CCeEEEEEE
Confidence 0 126999999998999999999986532 26789987764221 11222222334433 468999999
Q ss_pred eC
Q 010183 515 VS 516 (516)
Q Consensus 515 vD 516 (516)
||
T Consensus 425 vD 426 (437)
T smart00640 425 VD 426 (437)
T ss_pred Ee
Confidence 98
No 4
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=1.6e-83 Score=688.06 Aligned_cols=395 Identities=30% Similarity=0.512 Sum_probs=310.0
Q ss_pred CCCCCCCcceeccCCCCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeE
Q 010183 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (516)
Q Consensus 40 ~~~~~~Rp~~H~~p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~ 119 (516)
..+++|||+|||+|+.||||||||++|++|+||||||++|+++.||+||||||+|+|||||+++|+||.|++.+|+.|||
T Consensus 8 ~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 8 ALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred hccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEcccCC----CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCC
Q 010183 120 SGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (516)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~ 195 (516)
||||++ .+|+++|||||+.. ...+.|++|+|.|+ .+|+|.. +|||.++ +.....+||||+| |+ .+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~--~~~~~~~fRDP~V-~~-~~ 156 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELP--PAGYTAHFRDPKV-WK-HN 156 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCC--CCCCcCcCCCCcE-Ee-EC
Confidence 999985 68999999999753 24678999999874 5899985 5999764 3334578999996 54 36
Q ss_pred CeEEEEEeeee-CCccEEEEEEcCCCCCcEEeeeccccC-----CCCCceecCceEEecCCCCCCccccCCCCCceEEEE
Q 010183 196 KRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSV-----KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (516)
Q Consensus 196 g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~ 269 (516)
|+|||++|++. +..|++++|+|+||++|++.+.+.... ..+.||||||||+|+ | ||||+
T Consensus 157 g~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~ 221 (445)
T TIGR01322 157 GHWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLL 221 (445)
T ss_pred CEEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEE
Confidence 89999999876 456899999999999999987544332 234599999999997 5 89999
Q ss_pred EeeCCC----------CceeEEEEEEeCCCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCC
Q 010183 270 VSLDDT----------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV 338 (516)
Q Consensus 270 ~S~~~~----------~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~ 338 (516)
+|.++. ..+.|++|+||..+.+|+|++. ..++|+|+ |||+|||.++ +||||+||||++|+..
T Consensus 222 ~s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~ 294 (445)
T TIGR01322 222 FSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEID 294 (445)
T ss_pred EeccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccC
Confidence 987541 1357999999987789988642 57899998 9999999985 7999999999999877
Q ss_pred CCCCCCCccccccccEEEEEecCCCeEEecchHHHHHhhhcceeccceEecCCceEEEccccccccceEEEEEecccccc
Q 010183 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKA 418 (516)
Q Consensus 339 ~~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~~~~~~~~~~dle~~~~~~~~~~~ 418 (516)
.++.+.||+|+|||||+|+|+ +| +|+|+||+||++||..... ... ......+.++. .+++|+ +++..
T Consensus 295 ~~~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~~-~~~~l~--~~~~~---- 361 (445)
T TIGR01322 295 YPTDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGLN-GEFELI--LDLEK---- 361 (445)
T ss_pred CCCccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCCC-ceEEEE--EEecC----
Confidence 666778999999999999997 56 7999999999999986532 011 11111233332 233343 33320
Q ss_pred cccCCCCCCccccccccCccccCCCcceEEEEEEcCCCceeEEEEEEEEeCCCCceEEEEEecCCCCCCCCCCCCCeeeE
Q 010183 419 EKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGA 498 (516)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~gl~v~~s~~~~e~T~i~~~~~~~~~~~~~~~~~~Dr~~Ss~~~~~~~~~~~g 498 (516)
+....|||.+ .+ .++.|.|.|+..+.. +++||++|+..... ....
T Consensus 362 ----------------------~~~~~~~l~~-~~--~~~~~~i~~~~~~~~-------l~~dr~~~~~~~~~---~~~~ 406 (445)
T TIGR01322 362 ----------------------DSAFELGLAL-TN--KGEETLLTIDADEGK-------VTLDRRSSGNLEDY---GGTR 406 (445)
T ss_pred ----------------------CCccEEEEEE-eC--CCCeEEEEEECcCCE-------EEEEccCCCCcCCc---cceE
Confidence 0012589887 44 456899999866422 57899999754221 1122
Q ss_pred EEEEcCCCCeEEEEEeeC
Q 010183 499 FLNVDPVYEKLSLRSLVS 516 (516)
Q Consensus 499 ~~~~~~~~~~l~LRilvD 516 (516)
.+.+. .+++++||||||
T Consensus 407 ~~~~~-~~~~~~l~i~vD 423 (445)
T TIGR01322 407 SCPLP-NTKKVSLHIFID 423 (445)
T ss_pred EEEcC-CCCeEEEEEEEE
Confidence 34442 346899999998
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=3.8e-78 Score=617.73 Aligned_cols=300 Identities=41% Similarity=0.821 Sum_probs=247.9
Q ss_pred eccCCCCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010183 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (516)
Q Consensus 50 H~~p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg 129 (516)
||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|++.+|+.|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred ceEEEEcccCCCCceeEEEEEecCCCCCccceEEecC-CCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCC
Q 010183 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (516)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~-~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~ 208 (516)
+++|||||+..+..|.|++|+|.|.+ ++|+|++ +||||..+. ++ ...+||||+|+|++ +++|+|++|++...
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p-~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPP-PG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSS-TT-SCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecc-cC-CCCccccCeEEEec-CCEEEEEEeccccC
Confidence 89999999887568999999996643 8999998 499997530 33 77899999988985 69999999999888
Q ss_pred ccEEEEEEcCCCCCcEEeeeccccCC-CCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeC----CCCceeEEEE
Q 010183 209 KGLAILYRSKDFVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD----DTKHEYYTVG 283 (516)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~----~~~~~~Y~vG 283 (516)
.|+|++|+|+||++|++.+.+..... .+.||||||||+|+..|. + ....+|||++|.. ....+.|+||
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999886554432 478999999999994421 0 1123689999983 3467899999
Q ss_pred EEeCCCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCCCC-CCCCCccccccccEEEEEecC
Q 010183 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVND-DVKKGWAGIQAIPRKLWLDKS 361 (516)
Q Consensus 284 ~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~~~-~~~~gW~g~lslPReL~l~~~ 361 (516)
+||..+.+|+++.. ...++|+|+ |||+|+|.++.++|||+||||++++.... ....||+|+|||||||+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99877789987621 378999999 99999999975569999999999987532 236899999999999999865
Q ss_pred CCeEEecc
Q 010183 362 GKHLVQWP 369 (516)
Q Consensus 362 g~~L~q~P 369 (516)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 56899998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=5.5e-69 Score=546.72 Aligned_cols=286 Identities=40% Similarity=0.724 Sum_probs=246.1
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (516)
||||||||++|++|+||||||++|.++.|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988889999999999876549999999
Q ss_pred cccCC---CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC-CccE
Q 010183 136 TGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGL 211 (516)
Q Consensus 136 Tg~~~---~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~-~~G~ 211 (516)
||... ...+.|++|+|+|. +++|+|...+|++.++ .....+||||+|+|. +|+|||++|++.. ..|+
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~~---~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~ 151 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPPP---DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGR 151 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcCC---CCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcE
Confidence 99864 46799999999853 4899999888988632 335678999997665 4899999999763 5789
Q ss_pred EEEEEcCCCCCcEEeeecc-ccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCC------CceeEEEEE
Q 010183 212 AILYRSKDFVHWIKAKHPL-HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT------KHEYYTVGT 284 (516)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l-~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~------~~~~Y~vG~ 284 (516)
|.+|+|+||++|++.+... .....+.|||||+||++++. .||||++|.++. ..+.|++|+
T Consensus 152 i~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~ 218 (298)
T cd08996 152 ILLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGD 218 (298)
T ss_pred EEEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEE
Confidence 9999999999999876442 23345679999999999842 399999998753 356999999
Q ss_pred EeCCCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCC
Q 010183 285 YSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (516)
Q Consensus 285 ~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 363 (516)
+++. +|+++.. ...++|+|+ |||+|+|.++ ++|||+||||++++...+..+.||+|+|||||||+|++++
T Consensus 219 ~~~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~- 289 (298)
T cd08996 219 FDGT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG- 289 (298)
T ss_pred EECC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-
Confidence 9984 5665421 268999998 9999999986 7999999999999987778899999999999999999865
Q ss_pred eEEecchHH
Q 010183 364 HLVQWPVVE 372 (516)
Q Consensus 364 ~L~q~Pv~e 372 (516)
+|.|+||+|
T Consensus 290 ~l~~~P~~e 298 (298)
T cd08996 290 RLYQRPVRE 298 (298)
T ss_pred EEEEEeCCC
Confidence 899999976
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=1.4e-56 Score=451.96 Aligned_cols=267 Identities=28% Similarity=0.480 Sum_probs=222.5
Q ss_pred cCCccEEEECCEEEEEeeeCCCCCCC--CCcEEEEEEeCCCCCceecCCCCCCC-CCccCCCeEeeeEEEcCCCceEEEE
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPKGAVW--GNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKPAIFY 135 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~w--g~~~WgHa~S~DlvhW~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~l~Y 135 (516)
.|| .++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.|. ..++..|||||||++ .+|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 488 7899999999999999999888 89999999999999999999999884 567789999999975 579999999
Q ss_pred cccCC--CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee-----CC
Q 010183 136 TGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NR 208 (516)
Q Consensus 136 Tg~~~--~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~-----~~ 208 (516)
||... ...+.|++|+|+|+ ++|+|...+||+.++ +++...+||||+|+|.+++|+|||++|++. +.
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~--~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~ 151 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADG--EGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNR 151 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCc--cccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCC
Confidence 99764 25688999999873 799999888999744 455567899999877645799999999875 35
Q ss_pred ccEEEEEEcCCCCCcEEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC-CCceeEEEEEEeC
Q 010183 209 KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTYST 287 (516)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~-~~~~~Y~vG~~d~ 287 (516)
.|+|.+|+|+||++|++.+ ++.......|||||++|+++ | ||||++|.+. .....|++|+..
T Consensus 152 ~g~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~- 214 (280)
T cd08995 152 RGCIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP- 214 (280)
T ss_pred CeEEEEEEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC-
Confidence 6899999999999999875 55444456799999999997 5 9999999864 345689999622
Q ss_pred CCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCC
Q 010183 288 AKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (516)
Q Consensus 288 ~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 363 (516)
.+.|.... ...+| |+ |||||||.++ |||||||||++++...++.+.||+|+|| ||||.+.+||.
T Consensus 215 -~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 -FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred -CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 24564322 23589 98 9999999985 9999999999999877788899999998 68888887773
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=2e-39 Score=324.14 Aligned_cols=242 Identities=27% Similarity=0.399 Sum_probs=192.3
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCC-CcEEEEEEeCCCCCceecCCCC--CCCCCccCCCeEeeeEEEcCCCceEEEEc
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHDPAI--YPSQQSDINGCWSGSATILPGEKPAIFYT 136 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg-~~~WgHa~S~DlvhW~~~~~aL--~P~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (516)
||+++. |+||||||++|.+..++ ..+||||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565443 89999999999987654 4568999999999999999887 56677888999999998754499999999
Q ss_pred ccCC--CCceeEEEEEecCCCCCccceEEecCCCCcc-----cCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee-CC
Q 010183 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-----APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NR 208 (516)
Q Consensus 137 g~~~--~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi-----~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~-~~ 208 (516)
+... ...+.|++|+|+| +.+|+|.+.+|++ ..+ ......++|||+|++.+.+|+|+|++++.. ..
T Consensus 85 ~~~~~~~~~~~i~~A~S~D-----~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~ 157 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNP--GPWDDHAWRDPAVVRDEEGGGWRMYYGARDADE 157 (276)
T ss_pred cccCCCCCcceEEEEECCC-----CCceEECCCCcceeeeecCCC--CCcccccccccEEEEECCCCEEEEEEEeEccCC
Confidence 9863 4678899999988 4799998777653 222 233456899999776643499999999875 34
Q ss_pred ccEEEEEEcCCCCCcEEeeec--cccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC-CCceeEEEEEE
Q 010183 209 KGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTY 285 (516)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~-~~~~~Y~vG~~ 285 (516)
.++|.+|+|+|+++|++.+.. ........+||||++|+++ | +|+|+++... .....|.+|.+
T Consensus 158 ~~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~ 222 (276)
T cd08979 158 RGAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTA 222 (276)
T ss_pred CcEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEec
Confidence 678999999999999987643 1223345799999999997 5 9999999764 45678999987
Q ss_pred eCCCCeeecCCCCCCCCCceecccCC-CccceeEecCCCCcEEEEEeccCC
Q 010183 286 STAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNES 335 (516)
Q Consensus 286 d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~ 335 (516)
+. ..|+|.. ...+|.|. |||+|++.+.+++|++++|||+++
T Consensus 223 ~~--~~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 223 LF--GPGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cc--CCccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 65 3455542 46789998 999999987546999999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=6.2e-37 Score=306.51 Aligned_cols=270 Identities=29% Similarity=0.441 Sum_probs=205.2
Q ss_pred cCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCC----CCCCccCCCeEeeeEEEcCCCceEEE
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
|||| +++++|+||||||++|.+ +.++|+|++|+||+||++++.+|. |...++..+||+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 899999999999999875 678999999999999999998884 66777789999999987544999999
Q ss_pred EcccCC-CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC-CccEE
Q 010183 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLA 212 (516)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~-~~G~i 212 (516)
||+... ...+.+++|+|+|.. ..|++...+||+.... .......+|||+|++. ++|+|||++++... ..+.|
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~-~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNP-PAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCC-CccccccccCCeEEEc-CCCCEEEEEccccCCCCCeE
Confidence 999753 356889999998853 3567665556664220 2234567999996554 56999999998642 35689
Q ss_pred EEEEcCCCCCcEEeeec--cccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC------CCceeEEEEE
Q 010183 213 ILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD------TKHEYYTVGT 284 (516)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~------~~~~~Y~vG~ 284 (516)
.+++|+|+.+|+..+.+ ........++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223356799999999997 5 8999999754 3446777776
Q ss_pred EeCCCCeeecCCCCCC-CCCceecccCC-CccceeEecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEE
Q 010183 285 YSTAKDRYVPDEGSVE-SDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (516)
Q Consensus 285 ~d~~~~~F~p~~~~~~-~~~~~~lD~G~-fYA~~t~~d~~~gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~ 357 (516)
.+ .+.|++...... .......|.+. +||++.|.++ +||+++++|+.+++.... ...+|+++|+|||+|+
T Consensus 216 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SD--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CC--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 43 356765432100 00123456676 9999999986 799999999999876433 5679999999999874
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.96 E-value=2e-26 Score=237.01 Aligned_cols=272 Identities=21% Similarity=0.267 Sum_probs=175.5
Q ss_pred CCccEEE-ECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010183 60 DPNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 60 DPnG~~~-~~G~YHLFYQ~~P~~----~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
|..|-+. ++|..-+|+...|.. +.|+.+||||++|+||++|++.+ +|.|+..+|..+||||||++..+|+++||
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~lf 87 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQLF 87 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEEE
Confidence 5556444 677655999988764 46889999999999999999955 57788889999999999987667999999
Q ss_pred EcccCC----CCceeEEEEEecCCCCCccceEEecC--CCCcccCCC------------CCcCCCCCCCCCEEEEeCCCC
Q 010183 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSP--KNPLMAPDA------------MNQINTSSFRDPTTAWLGPDK 196 (516)
Q Consensus 135 YTg~~~----~~~q~q~lA~s~D~~d~~l~~w~k~~--~nPvi~~~~------------~~~~~~~~fRDP~v~w~~~~g 196 (516)
|||+.+ .....|++|.+.+.. +..|.+.. ..+++.++. .+.....+||||+|+..+++|
T Consensus 88 YTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 88 YTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 999853 245788888776532 22333221 124443220 012235789999976543479
Q ss_pred eEEEEEeeeeC-C---------------------------ccEEEEE--EcCCCCCcEEeeeccccCCC-CCceecCceE
Q 010183 197 RWRVIIGSKIN-R---------------------------KGLAILY--RSKDFVHWIKAKHPLHSVKG-TGMWECPDFF 245 (516)
Q Consensus 197 ~w~m~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~~-~~~wECPdlf 245 (516)
+|||+++++.. . .|+|.|+ +|+|+.+|++.+ ||.+... ...||||++|
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVV 243 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEE
Confidence 99999998763 2 3666666 677999999876 5654432 4579999999
Q ss_pred EecCCCCCCccccCCCCCceEEEEEeeCCC---------CceeEEEEEEeCCCCeeecCCCCCCCCCceecccC--CCcc
Q 010183 246 PVSTYGLNGLDTSDMGPNTKHVLKVSLDDT---------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYG--KYYA 314 (516)
Q Consensus 246 ~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~---------~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G--~fYA 314 (516)
+++ | ||+|+.|.... ...++++++ ...+.|.|-+.. .+.+--- .-|.
T Consensus 244 ~~~--g-------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsd--sl~GP~~~~n~s-----glvl~~p~~~~~~ 301 (349)
T cd08997 244 FHN--G-------------KYYLFTISHRSTFAPGLSGPDGLYGFVSD--SLRGPYKPLNGS-----GLVLGNPTDAPFQ 301 (349)
T ss_pred EEC--C-------------EEEEEEeCCcCccccccCCCCcEEEEEeC--CCCCCCccCCCC-----cceeCCCCCCccc
Confidence 998 6 99999985432 123455553 233456664321 1111100 1344
Q ss_pred ceeEecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCC
Q 010183 315 SKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362 (516)
Q Consensus 315 ~~t~~d~~~gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g 362 (516)
+++..--++ -++...|.+..... ......|.++-.-.|.|+.|.
T Consensus 302 ~ys~~~~p~--~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~gd~ 345 (349)
T cd08997 302 TYSWYVMPN--GLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKGDK 345 (349)
T ss_pred cceEEEECC--CEEEEEecccCCcc--cccccCCeeCCeEEEEEcCCc
Confidence 555443333 36667788775422 133566777655556665443
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.90 E-value=6.5e-23 Score=207.95 Aligned_cols=191 Identities=21% Similarity=0.300 Sum_probs=141.9
Q ss_pred eeccCCCCCccCCccEEEE-CCEEEEEeeeCCCCCC---C-CCcEEEEEEeCCCC-CceecCCCCCCC--CCccCCCeEe
Q 010183 49 YHFQPPKNWINDPNGVMIY-KGIYHLFYQYNPKGAV---W-GNIVWAHSTSKDLI-NWIPHDPAIYPS--QQSDINGCWS 120 (516)
Q Consensus 49 ~H~~p~~gW~NDPnG~~~~-~G~YHLFYQ~~P~~~~---w-g~~~WgHa~S~Dlv-hW~~~~~aL~P~--~~~D~~gv~S 120 (516)
.+|..+..++.+|. +++. +|+||||||.+|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788889999995 6665 5899999999987643 2 23569999999987 899999999887 4688999999
Q ss_pred eeEEEcCCCceEEEEcccCC-------CCceeEEEEEecCCCCCccceEEecCCCCcccCC------------------C
Q 010183 121 GSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD------------------A 175 (516)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~------------------~ 175 (516)
++++. .+|+++|+||+... ...+.+++|+|++. +.+|++. .+||+.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99875 57999999999753 23567788888763 2467775 45665320 0
Q ss_pred C---------------------------C-c-------------CCCCCCCCCEEEEeCCCCeEEEEEeeeeC----Ccc
Q 010183 176 M---------------------------N-Q-------------INTSSFRDPTTAWLGPDKRWRVIIGSKIN----RKG 210 (516)
Q Consensus 176 ~---------------------------~-~-------------~~~~~fRDP~v~w~~~~g~w~m~~ga~~~----~~G 210 (516)
. . + .....+|||+ ||+ .+|+|||+++++.. ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 0 0 0 0124579999 566 46999999998753 467
Q ss_pred EEEEEEcCCCCCcEEeeecccc-----C----CCCCceecCceE-Eec
Q 010183 211 LAILYRSKDFVHWIKAKHPLHS-----V----KGTGMWECPDFF-PVS 248 (516)
Q Consensus 211 ~i~ly~S~Dl~~W~~~~~~l~~-----~----~~~~~wECPdlf-~l~ 248 (516)
++.+|+|+|+++|++.+.++.. . ....+||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 8999999999999987654321 1 135799999999 776
No 12
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.85 E-value=5.1e-20 Score=184.87 Aligned_cols=158 Identities=18% Similarity=0.230 Sum_probs=119.4
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecC-CCCCC--CCCccCCCeEeeeEEEcCCCceEEEEc
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYP--SQQSDINGCWSGSATILPGEKPAIFYT 136 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~-~aL~P--~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (516)
|| |+++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 78 8999999999999987643 56899999999999999865 44666 5678889999999874 6899999999
Q ss_pred ccCC-CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEe-CCCCeEEEEEeeee---CCccE
Q 010183 137 GIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL-GPDKRWRVIIGSKI---NRKGL 211 (516)
Q Consensus 137 g~~~-~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~-~~~g~w~m~~ga~~---~~~G~ 211 (516)
+... ...+++++|.|+| +.+|+|... ++. + ..||+.+ |. ..+|+|+|++.... ++.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D-----~~~W~~~~~--~~~-~--------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~ 139 (268)
T cd08993 77 ARPNAPNGTRIGLATTKD-----FITFERLGT--SLV-P--------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPD 139 (268)
T ss_pred ccCCCCCCcEEEEEEeCC-----cceEEEecc--cCC-C--------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCc
Confidence 9763 3567899999988 489999732 221 2 1378874 53 24899999996442 24678
Q ss_pred EEEEEcCCCCCcEEeeeccccCCCCCceec
Q 010183 212 AILYRSKDFVHWIKAKHPLHSVKGTGMWEC 241 (516)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEC 241 (516)
|.+++|+|+.+|+..+ ++... ..+.||+
T Consensus 140 I~lA~S~Dl~~W~~~~-~~~~~-~~~~wd~ 167 (268)
T cd08993 140 MWLSFSPDLVHWGNHR-FVLSP-RPNHWEQ 167 (268)
T ss_pred EEEEECCCcCccCCCe-EEecC-CCCceee
Confidence 9999999999998754 33332 2234654
No 13
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.83 E-value=3.1e-19 Score=181.70 Aligned_cols=162 Identities=20% Similarity=0.275 Sum_probs=123.7
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCC--CCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGA--VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~--~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (516)
+.+| -+++++|+||||||++|..+ .++.++|+||+|+||++|++.++++.+ ..++.+++++.+.+|+++|+|
T Consensus 79 ~WAP-~v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 79 FWAP-EVVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eeCc-eEEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEE
Confidence 3578 47899999999999998753 346789999999999999998876322 357899999876679999999
Q ss_pred cccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEE
Q 010183 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (516)
Q Consensus 136 Tg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly 215 (516)
|+.. ..+.+++|.|+| +.+|++. .+++... ..++|+|+ + .+|+|||+++. ..| +.+|
T Consensus 153 ~~~~--~~~~~~~a~s~D-----~~~w~~~--~~~i~~~--------~~EgP~v~-k-~~g~yym~~~~---~~g-~~~~ 209 (294)
T cd08984 153 KDER--RGSTTYAADSED-----LYHWTVE--GPVLGDR--------PHEGPNVF-R-WKGYYWMIIDE---WKG-LGVY 209 (294)
T ss_pred ECCC--CCeEEEEEECCC-----CCEEEeC--CccccCC--------CCCCCCee-E-ECCEEEEEEcC---Cce-EEEE
Confidence 9854 334668898887 4799985 3666422 23799965 4 47899999854 234 6799
Q ss_pred EcCCCCCcEEeeeccccCC----CCCceecCceEEec
Q 010183 216 RSKDFVHWIKAKHPLHSVK----GTGMWECPDFFPVS 248 (516)
Q Consensus 216 ~S~Dl~~W~~~~~~l~~~~----~~~~wECPdlf~l~ 248 (516)
+|+|+.+|++.+.++.... ...+++||++++.+
T Consensus 210 ~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 210 RSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred ECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999999999887665421 23478999999876
No 14
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.83 E-value=3.9e-19 Score=178.97 Aligned_cols=191 Identities=18% Similarity=0.253 Sum_probs=139.1
Q ss_pred CCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCC-CCccCCCeEeeeEEEcCCCceEE
Q 010183 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKPAI 133 (516)
Q Consensus 55 ~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~l 133 (516)
.||++||+ +++++|+||||++..+.+. ....|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899996 5789999999998765322 24679999999999999999998764 456678999999875 6899999
Q ss_pred EEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEE
Q 010183 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (516)
Q Consensus 134 ~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ 213 (516)
+||+. +.+++|+|++.. -.|++...+|++... . .....+||.|+ .+++|+|||++++. +.+.
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~--~--~~~~~iDp~vf-~d~dG~~yl~~~~~----~~~~ 142 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKF--T--FGAQPIDPDVF-IDDDGQAYLYWGGW----GHCN 142 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCC--c--CCCCccCCCeE-ECCCCCEEEEEcCc----CCEE
Confidence 99986 457899988753 358874467887543 1 23568999965 44689999999873 2233
Q ss_pred E-EEcCCCCCcEEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeEEEE
Q 010183 214 L-YRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (516)
Q Consensus 214 l-y~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y~vG 283 (516)
+ --|+|+..|+.....+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 143 i~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 143 VAKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 3 3578999887543222 11234589999999987 6 8899998754332345554
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.78 E-value=1.7e-17 Score=167.62 Aligned_cols=195 Identities=21% Similarity=0.198 Sum_probs=135.6
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCC-ccCCCeEeeeEEEcCCCceEEE
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-SDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~l~ 134 (516)
+.+-|| .+++++|+|+||+..... .+|++++|+||+||+..+.+|.+... ++..++|.++++ ..+|+++|+
T Consensus 6 ~~~~DP-~i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~-~~~g~y~~~ 77 (287)
T cd08999 6 GDFPDP-SVIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVS-YVNGKYVLY 77 (287)
T ss_pred CCCCCC-eEEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEE-EECCEEEEE
Confidence 456799 577889999999986532 57999999999999999988877655 445678888876 468999999
Q ss_pred EcccCC-CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCcc---
Q 010183 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG--- 210 (516)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G--- 210 (516)
|++... ...+.+++|+|+|.. ..|++....++..+. .....+||.|++ +++|+|||++++.....|
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~~~~-----~~~~~~Dp~v~~-d~dG~~Yl~~~~~~~~~~~~~ 147 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLCCPE-----GEGGAIDPSFFT-DTDGKRYLVWKSDGNSIGKPT 147 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEecCC-----CCCCccCCCeEE-CCCCCEEEEEeccCCCCCCCc
Confidence 999764 245667888887643 468876433333222 235579999654 468999999987542211
Q ss_pred EEEEE-EcCCCCCcEEeeeccccC---CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCce--eEEEE
Q 010183 211 LAILY-RSKDFVHWIKAKHPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHE--YYTVG 283 (516)
Q Consensus 211 ~i~ly-~S~Dl~~W~~~~~~l~~~---~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~--~Y~vG 283 (516)
.+.+. .|+|+.+|......+... ....++|||.+|+.+ | +++|++|....... .|.+|
T Consensus 148 ~i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~ 211 (287)
T cd08999 148 PIYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVG 211 (287)
T ss_pred eEEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEE
Confidence 23333 378999986433222211 134589999999986 6 89999987532221 46555
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.72 E-value=3.5e-16 Score=157.51 Aligned_cols=195 Identities=15% Similarity=0.201 Sum_probs=139.4
Q ss_pred CCccEEEECCEEEEEeeeCCCCCC---CCCcEEEEEEeCCCCCceecCCCCCCCC--CccCCCeEeeeEEEcCCCceEEE
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~---wg~~~WgHa~S~DlvhW~~~~~aL~P~~--~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
|| .+++++|+||||.......+. +....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP-~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DP-AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CC-CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 89 577899999999988755432 3334699999999999999999887553 36778999999864 68999999
Q ss_pred EcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEE
Q 010183 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (516)
Q Consensus 135 YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~l 214 (516)
|++......+.+++|+|++.. -.|++....|++... . ......||.++ .+++|++||++++. .+....
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~ 147 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--S--GGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVA 147 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--C--CCCCccCCcEE-ECCCCCEEEEECCc---CCEEEE
Confidence 998754345678899987743 468876555555322 1 23457899965 44689999999874 233334
Q ss_pred EEcCCCCCcEEeeecccc-----CCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeEEEE
Q 010183 215 YRSKDFVHWIKAKHPLHS-----VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (516)
Q Consensus 215 y~S~Dl~~W~~~~~~l~~-----~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y~vG 283 (516)
-.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 148 ~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 148 KLKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred EeCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 468899999754333321 1234578999999987 6 8999999765444455544
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.67 E-value=3.5e-15 Score=148.53 Aligned_cols=192 Identities=21% Similarity=0.230 Sum_probs=131.0
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCC----CCCCccCCCeEeeeEEEcCCCceEEEE
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIFY 135 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (516)
|| .++.++|+|+||+..... ....++.++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP-~v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DP-YILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CC-cEEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 89 578899999999997643 234689999999999999998875 44445568899999865 579999999
Q ss_pred cccCC-CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC--CccEE
Q 010183 136 TGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLA 212 (516)
Q Consensus 136 Tg~~~-~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~--~~G~i 212 (516)
++... ...+.+++|+|+|. ..|.+... ...+ . ......+||.|+. +++|++||+.++... +.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~--~-~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i 143 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPP--T-SNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGI 143 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccc---cCcC--c-cCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcE
Confidence 99753 23567888988774 45544321 1111 1 1234578999655 466999999987642 24568
Q ss_pred EEEEcCCCCCcEEeeecc--ccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeEEEEE
Q 010183 213 ILYRSKDFVHWIKAKHPL--HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284 (516)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~l--~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y~vG~ 284 (516)
.++++++...|......+ .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 144 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 144 YISELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEEECcccccccCCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 888887655443211111 112234589999999987 5 89999987643223455553
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.64 E-value=1.7e-14 Score=146.56 Aligned_cols=180 Identities=18% Similarity=0.174 Sum_probs=126.0
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCC-CccCCCeEeeeEEEcCCCceEEEEccc
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPAIFYTGI 138 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~ 138 (516)
|| .+++++|+|+||+..... ...+..++|+||++|+.++.++.+.. .|+..++|.++++. .+|+++|+||+.
T Consensus 2 DP-~v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DP-FVLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CC-eEEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 89 577899999999886643 23588999999999999998887654 37778999999864 689999999987
Q ss_pred CCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCC---ccEEEE
Q 010183 139 DPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR---KGLAIL 214 (516)
Q Consensus 139 ~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~---~G~i~l 214 (516)
... ..+.+++|+|+|.. -.|++... +.+... ....||.+++. ++|+|||+.+..... .+....
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~~-------~~~iD~~vf~d-~dG~~yl~~~~~~~~~~~~~i~~~ 141 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDFE-------PKSIDAHPFID-DDGKPYLYYSRNNYGNRVSDIYGT 141 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCC-CcccCC-------CcccCCceEEC-CCCCEEEEEEecCCCCcccceEEE
Confidence 543 45778899997742 35776532 222211 24679996544 679999999864322 234444
Q ss_pred EEcCCCCCcEEeee----ccccC--------------CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 215 YRSKDFVHWIKAKH----PLHSV--------------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 215 y~S~Dl~~W~~~~~----~l~~~--------------~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
--|.|+.+|..... ++..+ ....+.|+|.+++.+ | +|+|++|...
T Consensus 142 ~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 142 ELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred EEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 46888877752111 11110 123478999999997 5 8999988643
No 19
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.62 E-value=1.4e-14 Score=149.43 Aligned_cols=179 Identities=18% Similarity=0.274 Sum_probs=127.2
Q ss_pred CcceeccCCCCC-ccCCccEEEECCEEEEEeeeCCC-----------CC--CCCCcEEEEEEeCCCCCceecCCCCCCC-
Q 010183 46 RTGYHFQPPKNW-INDPNGVMIYKGIYHLFYQYNPK-----------GA--VWGNIVWAHSTSKDLINWIPHDPAIYPS- 110 (516)
Q Consensus 46 Rp~~H~~p~~gW-~NDPnG~~~~~G~YHLFYQ~~P~-----------~~--~wg~~~WgHa~S~DlvhW~~~~~aL~P~- 110 (516)
.|..=+.+..+- ..||..+++.+|+|||||++... .+ .|....++||+|+||+||++.+++|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 445545555553 46998899999999999996531 11 2457889999999999999999888764
Q ss_pred -CCccCCCeEeeeEEEcCCCceEEEEcccCCC----CceeEEEEEecCCCCCccceEEecCCCCcccCCCC---------
Q 010183 111 -QQSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM--------- 176 (516)
Q Consensus 111 -~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~--------- 176 (516)
..||..++|.++++ ..+|+++|+|++.... ..+..++|+|++.. -.|++. .+||+.+...
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 35899999999986 5799999999975421 23567999998753 359986 6799854310
Q ss_pred -------CcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC--------CccEEEEEEcCCCC-CcEEee-ecccc
Q 010183 177 -------NQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--------RKGLAILYRSKDFV-HWIKAK-HPLHS 232 (516)
Q Consensus 177 -------~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~~-~~l~~ 232 (516)
..++...+.||.|+.. +|+|||++.+... ..-++.++.|++.. -|+... +|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~~--~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~~ 248 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFPF--NGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPITN 248 (349)
T ss_pred eeEeccCCCcccCceECCEEEEE--CCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCcccC
Confidence 1134456789996543 7899999966431 12368899998875 687543 35543
No 20
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.58 E-value=1.2e-13 Score=139.96 Aligned_cols=190 Identities=20% Similarity=0.225 Sum_probs=126.9
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCc
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEK 130 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~-------~D~~gv~SGsav~~~dg~ 130 (516)
+.|| .+++++|+|+||+... ++++++|+||+||++.+.+|.+... ....++|.++++. .+|+
T Consensus 1 ~~DP-~v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDP-SIIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCC-eEEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 4699 5889999999999864 5899999999999999988865432 3457889999864 6999
Q ss_pred eEEEEcccCCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCc
Q 010183 131 PAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (516)
Q Consensus 131 ~~l~YTg~~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~ 209 (516)
++|+|++.... ..+.+++|+|++.. ...|++. +||+... ++......+||.++. +++|++||++++.. .
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~--~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~~--~ 139 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESG--PGRDDPNAIDPNVFY-DEDGKLWLSFGSFW--G 139 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecC--CCCCCcccccCCEEE-cCCCCEEEEeeecc--C
Confidence 99999986542 45667889987740 1479874 5888543 221234578999654 46899999998642 1
Q ss_pred cEEEEEE-cCC---CCCcEEeeeccccCC-CCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCC---ceeEE
Q 010183 210 GLAILYR-SKD---FVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK---HEYYT 281 (516)
Q Consensus 210 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~---~~~Y~ 281 (516)
| +.+.+ ++| ...|......+.... .....|-|.+|+.+ | +++|++|..... ...|.
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcchhcCCCCCceE
Confidence 2 33332 223 223321111122111 23468999999987 5 889988864322 24455
Q ss_pred EEE
Q 010183 282 VGT 284 (516)
Q Consensus 282 vG~ 284 (516)
++-
T Consensus 204 v~~ 206 (288)
T cd08998 204 IRV 206 (288)
T ss_pred EEE
Confidence 543
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.57 E-value=1.7e-13 Score=139.57 Aligned_cols=169 Identities=21% Similarity=0.282 Sum_probs=118.1
Q ss_pred ccCCccEEEE--CCEEEEEeee-C---CCC-CCCC-CcEEEEEEeCC-CCCceecCCCCCCCCCccCCCeEeeeEEEcCC
Q 010183 58 INDPNGVMIY--KGIYHLFYQY-N---PKG-AVWG-NIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPG 128 (516)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~-~---P~~-~~wg-~~~WgHa~S~D-lvhW~~~~~aL~P~~~~D~~gv~SGsav~~~d 128 (516)
.-|| .+++. +|+|||||.. . |.. ..|. ...+|+|+|+| |+||++++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP-~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADP-TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCC-EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 6799 57787 8899999952 1 111 2233 35799999999 99999988776664455667799999864 68
Q ss_pred CceEEEEcccCC-----CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEe
Q 010183 129 EKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (516)
Q Consensus 129 g~~~l~YTg~~~-----~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~g 203 (516)
|+++|||+.... ......++|+|+| |.+|++.+ ++.... ....||.|+.. .+|+|+|++.
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~~-------~~~iD~~vf~~-~dg~~yl~y~ 153 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLDS-------DRVIDACVFKL-PDGRWRMWYK 153 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccCC-------CCcEEeEEEEe-CCCEEEEEEE
Confidence 999999997532 1345677888877 47899753 332111 23579996543 5799999996
Q ss_pred eeeCCccEEEEEEcCCCCCcEEeeeccccCCCCCceecCceEEec
Q 010183 204 SKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (516)
Q Consensus 204 a~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (516)
... ....+.+..|+|+.+|+..+..+ . ...-|.|.+|+.+
T Consensus 154 ~~~-~~~~~~~a~s~D~~~w~~~~~~i-~---~~~~EgP~v~k~~ 193 (294)
T cd08984 154 DER-RGSTTYAADSEDLYHWTVEGPVL-G---DRPHEGPNVFRWK 193 (294)
T ss_pred CCC-CCeEEEEEECCCCCEEEeCCccc-c---CCCCCCCCeeEEC
Confidence 532 22346788999999998654322 2 1234999999986
No 22
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.51 E-value=3.7e-12 Score=127.97 Aligned_cols=197 Identities=15% Similarity=0.090 Sum_probs=132.8
Q ss_pred cCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCC----CccCCCeEeeeEEEc-CCCceEE
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ----QSDINGCWSGSATIL-PGEKPAI 133 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~----~~D~~gv~SGsav~~-~dg~~~l 133 (516)
-|| ++++++|+|++|-.+...+.. ....|-..+|+||+||+..+.+|.+.. .+...++|.++++.. .+|+++|
T Consensus 4 h~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m 81 (265)
T cd08985 4 HGG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVM 81 (265)
T ss_pred ccC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEE
Confidence 366 688999999999887643211 123588899999999999999998764 344567899998754 3689999
Q ss_pred EEcccCCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEE
Q 010183 134 FYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212 (516)
Q Consensus 134 ~YTg~~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i 212 (516)
+|++...+ ....+++|+|++.. -.|+... .+ . + . ....|||.+++ +++|++||++++..+ ..+
T Consensus 82 ~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~-~--~--~---~~~~~Dp~vf~-DdDG~~Yl~~~~~~~--~~i 145 (265)
T cd08985 82 WMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SF-R--P--L---GYQSRDFGLFV-DDDGTAYLLYSDRDN--SDL 145 (265)
T ss_pred EEEeCCCCCcceeEEEEEeCCCC----CCCEECC-cc-C--C--C---CCCccCCceEE-cCCCCEEEEEecCCC--Cce
Confidence 99986432 45678899987653 3466542 12 1 1 1 13479999655 478999999997532 234
Q ss_pred EEEE-cCCCCCcEEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC---CCceeEEEEEEeCC
Q 010183 213 ILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD---TKHEYYTVGTYSTA 288 (516)
Q Consensus 213 ~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~---~~~~~Y~vG~~d~~ 288 (516)
.+++ ++|+..+... +.. .......|||.+|+.+ | +|+|+.|... .....|++.+ ..
T Consensus 146 ~i~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~--s~ 205 (265)
T cd08985 146 YIYRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT--SI 205 (265)
T ss_pred EEEEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec--CC
Confidence 5555 4688877532 211 1234578999999997 5 8999998642 1345677653 22
Q ss_pred CCeee
Q 010183 289 KDRYV 293 (516)
Q Consensus 289 ~~~F~ 293 (516)
.+.|+
T Consensus 206 ~GP~~ 210 (265)
T cd08985 206 LGPWT 210 (265)
T ss_pred CCCcc
Confidence 34554
No 23
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.45 E-value=5.6e-13 Score=136.76 Aligned_cols=164 Identities=20% Similarity=0.299 Sum_probs=114.1
Q ss_pred CCccEEEECCE--EEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecC-CCCCCCCCccCCCeEeeeEEEcCCCceEEEEc
Q 010183 60 DPNGVMIYKGI--YHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (516)
Q Consensus 60 DPnG~~~~~G~--YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (516)
.| |++.++|. |||+|...-. ..+..+.|+|.|+|++||+..+ ++|.|+..++..||....++. .+|+++|+||
T Consensus 34 Np-gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYt 109 (312)
T PF04041_consen 34 NP-GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYT 109 (312)
T ss_dssp EE-EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEE
T ss_pred cC-cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEE
Confidence 46 77767776 8999887532 2233589999999999999864 789999999999999999975 5889999999
Q ss_pred ccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCC-CcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEE
Q 010183 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM-NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (516)
Q Consensus 137 g~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~-~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly 215 (516)
+.+. .....++|+|+| +.+|+|.. +++..... .......-+|-..+-...+|+|+|+.+ .+.|.+.
T Consensus 110 a~~~-~~~~~~la~s~D-----~~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la 176 (312)
T PF04041_consen 110 AYSG-KGPRIGLATSKD-----FKHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLA 176 (312)
T ss_dssp EEES-SSEEEEEEEESS-----SSSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEE
T ss_pred EecC-CCcccceEEccc-----hHhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEE
Confidence 9874 346789999998 68999984 44432200 011112235654322224899999988 3568999
Q ss_pred EcCCCCCcEEeeeccccCCCCCceec
Q 010183 216 RSKDFVHWIKAKHPLHSVKGTGMWEC 241 (516)
Q Consensus 216 ~S~Dl~~W~~~~~~l~~~~~~~~wEC 241 (516)
+|+|+++|+....++... ..+.||+
T Consensus 177 ~S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 177 YSPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp EESSSSSEEEEBETSB---STTSSCS
T ss_pred ecCCcccccccccccccC-CCCcChh
Confidence 999999998765544433 3456777
No 24
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.42 E-value=9e-12 Score=126.41 Aligned_cols=179 Identities=18% Similarity=0.169 Sum_probs=117.7
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCC--c----cCCCeEeeeEEEcCCC
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--S----DINGCWSGSATILPGE 129 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~--~----D~~gv~SGsav~~~dg 129 (516)
+.+-||. +++++|+|+||...... ...+..++|+||+||+.++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677994 88899999998542221 124889999999999999888854322 1 346789999864 689
Q ss_pred ceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC--
Q 010183 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-- 207 (516)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~-- 207 (516)
+++|+|++........+++|+|++.. -.|+. |++. + ....||.+++. ++|++||+++....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~-~-------~~~iDp~vf~d-~dG~~Y~~~~~~~~~~ 141 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWL-D-------SGGIDPSLFFD-DDGKVYLVGNGWDERR 141 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEec-C-------CCccCCceeEc-CCCCEEEEecccCCcc
Confidence 99999998753334467788887653 24542 2221 1 14689996654 68999999886432
Q ss_pred ---CccEEEEEEcCCCCCcEEeeec--cccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 208 ---RKGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 208 ---~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
+.+.+.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|...
T Consensus 142 ~~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~~ 197 (288)
T cd09000 142 GYNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEGG 197 (288)
T ss_pred ccCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecCC
Confidence 1234555543 22344433322 2222223578999999987 5 8999988643
No 25
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.39 E-value=1.9e-11 Score=125.58 Aligned_cols=187 Identities=13% Similarity=0.234 Sum_probs=124.2
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCC---------CCCCcEEEEEEeCCCCCceecCCCCCCC--CCccCCCeEeeeEE
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGA---------VWGNIVWAHSTSKDLINWIPHDPAIYPS--QQSDINGCWSGSAT 124 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~---------~wg~~~WgHa~S~DlvhW~~~~~aL~P~--~~~D~~gv~SGsav 124 (516)
.+.-||. ++.++|+|+||....-... .+....+-..+|+||++|+.++.+|.|. ..|. .++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4668995 6789999999998754322 1223468889999999999999888742 3443 478999986
Q ss_pred EcCC----CceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCC-CCCCEEEEeCCCCeEE
Q 010183 125 ILPG----EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS-FRDPTTAWLGPDKRWR 199 (516)
Q Consensus 125 ~~~d----g~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~-fRDP~v~w~~~~g~w~ 199 (516)
. .+ |+++|+|+.. ...+++|+|++.. -.|+.....|++.... ++..... -.||.+++ +++|++|
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~-~~~~~~~~~iDp~~f~-DdDG~~Y 153 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGST-PGCAGVVWLFDPAVFV-DDDGQGY 153 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCC-CCccCCccccCCCeEE-CCCCCEE
Confidence 4 56 9999999853 2357899987653 4688754567774310 1211122 36999655 4789999
Q ss_pred EEEeeeeC-----CccEEEEEE-cCCCCCcEEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 200 VIIGSKIN-----RKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 200 m~~ga~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
|++++... ..+.+.+.+ ++|+..-. +.+..- .....+|.|.+++.+ | +++|++|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99986431 123455554 45765432 221111 112579999999987 6 899998864
No 26
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.39 E-value=5.9e-11 Score=119.96 Aligned_cols=185 Identities=15% Similarity=0.105 Sum_probs=121.8
Q ss_pred CCCccCCccEEEE--CCEEEEEeeeCCCCCCC-CCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcC-CCc
Q 010183 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVW-GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILP-GEK 130 (516)
Q Consensus 55 ~gW~NDPnG~~~~--~G~YHLFYQ~~P~~~~w-g~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~-dg~ 130 (516)
.+-+.||. +++. +|+||||+.-.-....+ +...+.+++|+||+||+....++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 34577995 6666 89999999865322222 356799999999999999876642211 23678999987654 689
Q ss_pred eEEEEcccCCC---CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC
Q 010183 131 PAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (516)
Q Consensus 131 ~~l~YTg~~~~---~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~ 207 (516)
++|+|+..... ....+.+.++.. .| +.+|++. .|++.+. ....|+.++.. +|+|||++.....
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt-~D--f~tft~p--~~~~~~~-------~~~ID~~v~~~--~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTT-SD--FVTFTEP--KVWIDLG-------ANVIDTTVVKV--GGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEec-Cc--ccccCCC--eEeecCC-------CCeEeeEEEEe--CCEEEEEEecCCC
Confidence 99999986532 122233333321 12 4788853 4666422 34689986543 5999999876432
Q ss_pred CccEEEEEEcCCCC-CcEEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 208 RKGLAILYRSKDFV-HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
..|.+.+|++|. .|+...... .......|-|.+|+++.. .+|+|+++..
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~y 207 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDNY 207 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEEC
Confidence 457888999987 787654321 112346899999999732 2888887653
No 27
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.34 E-value=6.2e-11 Score=119.35 Aligned_cols=183 Identities=21% Similarity=0.236 Sum_probs=126.7
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCcc--CCCe-EeeeEEEcCCCceE
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD--INGC-WSGSATILPGEKPA 132 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D--~~gv-~SGsav~~~dg~~~ 132 (516)
+..-|| -++.++|.|+||+...+.. ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++ ..+|+++
T Consensus 8 ~~~~DP-~i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADP-SIVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSE-EEEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCC-EEEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 566799 5788999999999877543 3588999999999999987776654332 2333 999986 5799999
Q ss_pred EEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCC--cc
Q 010183 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--KG 210 (516)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~--~G 210 (516)
|+|+.........+++|+|++.. -.|+.... +.+. .....||.+++. ++|++||+.+..... .+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~~-~~~~--------~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~ 146 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPGK-IPIP--------GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGG 146 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEEE-EEEE--------SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----cccccccc-eeec--------cccccCceEEEe-cCCCcEEeCcccCCCccce
Confidence 99993222355678899988753 46886521 1111 123579996654 679999999886432 34
Q ss_pred EEEEEE-cCCCCCcEEee-eccccC---CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 211 LAILYR-SKDFVHWIKAK-HPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~-~~l~~~---~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
.|.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 147 ~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 147 GIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred eEEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 555665 46777766543 222222 235689999999987 5 8999999654
No 28
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.32 E-value=4.2e-11 Score=119.63 Aligned_cols=137 Identities=21% Similarity=0.303 Sum_probs=97.6
Q ss_pred CCccCCccEEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCC-------CCCCccCCCeEeeeEEEcC
Q 010183 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY-------PSQQSDINGCWSGSATILP 127 (516)
Q Consensus 56 gW~NDPnG~~~~~-G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~-------P~~~~D~~gv~SGsav~~~ 127 (516)
+.+.||. +++.+ |+|||||+.+... ......+++|+|+|+++|+..+..+. +...++...+.++.++.+.
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~ 141 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDE 141 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEEC
Confidence 4567895 66777 9999999987532 23457899999999999999876542 2233444667888887654
Q ss_pred C-CceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010183 128 G-EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (516)
Q Consensus 128 d-g~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~ 205 (516)
+ |+++|+|++........+.+|.|+| |.+|++....+... .+.....+.+|.++ + .+|+|+|++++.
T Consensus 142 ~~g~y~m~~~~~~~~~~~~i~~a~S~D-----~~~W~~~~~~~~~~----~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 142 EGGGWRMYYGARDADERGAIGLATSPD-----LIHWTPVPPPPGPR----TGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCEEEEEEEeEccCCCcEEEEEECCC-----CCcceECCCCCCCC----CcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 3 8999999987544556788999887 58999875332121 22234568899965 4 468999999875
No 29
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.27 E-value=2.9e-10 Score=117.64 Aligned_cols=169 Identities=18% Similarity=0.208 Sum_probs=112.5
Q ss_pred cCCccEEEECCEEEEEeeeCCCC-CCCCCcEEEEEEeCCCC-CceecC-CCCCCCC------------------CccCCC
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPKG-AVWGNIVWAHSTSKDLI-NWIPHD-PAIYPSQ------------------QSDING 117 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~-~~wg~~~WgHa~S~Dlv-hW~~~~-~aL~P~~------------------~~D~~g 117 (516)
.-| .+++++|+|||||+..-.. ..-...+.|+|+|++.. .|++.. ++|.|.. .||..+
T Consensus 113 waP-~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~ 191 (349)
T cd08992 113 FTP-EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHK 191 (349)
T ss_pred ECc-EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCc
Confidence 457 4778999999999964211 11123578889988876 699764 5566652 367777
Q ss_pred eEeeeEEEcCCCceEEEEcccCC-------CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEE
Q 010183 118 CWSGSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA 190 (516)
Q Consensus 118 v~SGsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~ 190 (516)
+...+++ ..+|+++|||+|+.. ...+.+++|+|++.. -.|+|.+.|||+... + ..+ +
T Consensus 192 v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~--------~--~~~-~ 255 (349)
T cd08992 192 VHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG--------H--ETC-V 255 (349)
T ss_pred eECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC--------C--ceE-E
Confidence 7777764 579999999999752 235678999998864 458999899999543 1 125 7
Q ss_pred EeCCCCeE-EEEEeeeeCCccEEEEEEcCCCCCcEEeeeccccCCCCCceecCceEEec
Q 010183 191 WLGPDKRW-RVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (516)
Q Consensus 191 w~~~~g~w-~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (516)
|+. ++.+ .|+..- ..+.|. +..|+|.++|+-....-..+...|..+|||-+.-.
T Consensus 256 ~~~-~~~~~~~~~~d-~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 256 WQY-KGGIAAMLTTD-GPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred Eec-CCceEEEEecc-CCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 984 4556 554433 333454 77899999999654322222334566777766544
No 30
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.26 E-value=4.2e-10 Score=114.64 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=93.3
Q ss_pred CCccCCccEEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCC-CccCCCeEeeeEEEcCCCceE
Q 010183 56 NWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPA 132 (516)
Q Consensus 56 gW~NDPnG~~~~--~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~~~ 132 (516)
.++-||. ++++ +|+||||..............+.+.+|+||+||+..+.++.|.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578995 6777 99999999865332111123589999999999999998886643 3445688999975 5799999
Q ss_pred EEEcccCCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010183 133 IFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (516)
Q Consensus 133 l~YTg~~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga 204 (516)
|+|+..... ....+++|+|++.. -.|+.....|+.... ....||.+ +.+++|++||+++.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~~-------~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPED-------WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCCC-------CceEcCce-EEcCCCCEEEEEEe
Confidence 999875432 22346788887643 357765333443211 23579985 45578999999874
No 31
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.25 E-value=6.2e-10 Score=112.61 Aligned_cols=179 Identities=20% Similarity=0.208 Sum_probs=115.3
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCc-------cCCCeEeeeEEEcCCCceE
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS-------DINGCWSGSATILPGEKPA 132 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg~~~ 132 (516)
|| .++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|.+.++ ..+|+++
T Consensus 2 DP-~vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 70 (279)
T cd08988 2 DP-VIIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIY-QHNGKFY 70 (279)
T ss_pred CC-EEEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEE-EECCEEE
Confidence 89 5778899999997642 37789999999999999888644332 23679999986 4689999
Q ss_pred EEEcccCCC-CceeEEEEEecCCCCCcc-ceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCcc
Q 010183 133 IFYTGIDPH-NRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (516)
Q Consensus 133 l~YTg~~~~-~~q~q~lA~s~D~~d~~l-~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G 210 (516)
|+|++.... ....+++|+|++...|+- ..|++ ..|++... .. ....-.||.+++. +||++||+.|+.. .|
T Consensus 71 lyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~--~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g 142 (279)
T cd08988 71 LYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSD--AS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG 142 (279)
T ss_pred EEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecC--CC-CCCCccCCceEEc-CCCCEEEEecccC--CC
Confidence 999976432 346778999987644321 12443 24666432 11 1223479996655 7899999998632 23
Q ss_pred EEEEEE-cCCCCCcEEeee--ccccC-CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 211 LAILYR-SKDFVHWIKAKH--PLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~~--~l~~~-~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
|.+.+ ++|+..-...+. .+... ......|-|-+++.+ | +++|+.|..
T Consensus 143 -i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 143 -IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred -EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 33333 455443210111 12111 123467999999986 5 888988864
No 32
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.12 E-value=4.9e-09 Score=105.53 Aligned_cols=176 Identities=16% Similarity=0.136 Sum_probs=112.0
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCc------cCCCeEeeeEEEcCCC
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPGE 129 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~------D~~gv~SGsav~~~dg 129 (516)
+..-|| .++.++|+|+||+...... ..+...+|+||+||+..+.++...... ...++|.+.++ ..+|
T Consensus 6 ~~~~DP-~ii~~~~~yY~~~t~~~~~-----~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G 78 (269)
T cd08989 6 GDNPDP-SIIRAGDDYYMASSTFEWF-----PGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDG 78 (269)
T ss_pred CCCCCC-cEEEECCeEEEEECccccC-----CCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECC
Confidence 556799 5788999999998643211 136678999999999988877543211 23579999875 5699
Q ss_pred ceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCc
Q 010183 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (516)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~ 209 (516)
+++|+|+.........+++|++++... .|+. |+... ..-.||.+++ +++|+.||+.+..
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~--------~~~IDp~~f~-D~dG~~Yl~~~~~---- 137 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN--------YGGFDPSLFH-DDDGKKYLINMGW---- 137 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC--------CCcccCceEE-cCCCCEEEEecCC----
Confidence 999999986433345678898876532 3543 33321 1347999655 4789999998752
Q ss_pred cEEEEEE-cCCCCCc--EEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 210 GLAILYR-SKDFVHW--IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 210 G~i~ly~-S~Dl~~W--~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
+.|.+.+ +.|...= +.....+.........|-|-+++.+ | +++|++|...
T Consensus 138 ~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 138 SGIRLQEYSPAEKKLIGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred CcEEEEEEChhhCCCCCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 2244443 2332210 0000011111223468999999976 5 8899998654
No 33
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.11 E-value=3.4e-09 Score=106.77 Aligned_cols=179 Identities=17% Similarity=0.078 Sum_probs=111.1
Q ss_pred CccCCccEEEE-CCEEEEEeeeCCCCCC----C-CCcEEEEEEeCCCCCceecCCCCCCCCC------------ccCCCe
Q 010183 57 WINDPNGVMIY-KGIYHLFYQYNPKGAV----W-GNIVWAHSTSKDLINWIPHDPAIYPSQQ------------SDINGC 118 (516)
Q Consensus 57 W~NDPnG~~~~-~G~YHLFYQ~~P~~~~----w-g~~~WgHa~S~DlvhW~~~~~aL~P~~~------------~D~~gv 118 (516)
||-||. ++.. +|+|+|+......+.. + ..-..-.++|+||+||+..+.++..... +...++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688995 5555 6899999885432210 0 1234778999999999998888754321 234678
Q ss_pred EeeeEEEcCCCceEEEEcccCCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCe
Q 010183 119 WSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (516)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~ 197 (516)
|.+.+. ..+|+++|+|+..... ....+++|++++.. -.|+..... .+ ...-.||.++ .+++|+
T Consensus 80 WAP~v~-~~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~----~~------~~~~iD~~~f-~D~DG~ 143 (269)
T cd08986 80 WAPELH-YIKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGN----KP------LFPGIDPSLF-EDDDGK 143 (269)
T ss_pred CCceEE-EECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCC----CC------CCCccCCceE-EcCCCC
Confidence 988876 4689999999976432 23456677766543 346654221 01 0124699854 557899
Q ss_pred EEEEEeeeeCCccEEEEEEcCCCCCcEEeeeccccC----CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 198 WRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV----KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 198 w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
+||+.++.. + .--++|+....-....+... ......|-|-+++.+ | +++|++|..
T Consensus 144 ~Yl~~~~~~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 144 VYLVWHNTL-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEEeeCCc-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 999987531 1 12255655443111111111 112357999999976 5 899999864
No 34
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.08 E-value=6.9e-09 Score=104.47 Aligned_cols=170 Identities=15% Similarity=0.082 Sum_probs=111.8
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCC-----------ccCCCeEeeeEE
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-----------SDINGCWSGSAT 124 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~-----------~D~~gv~SGsav 124 (516)
++.-|| .+++++|+|+||....-. ...+...+|+||+||+..+.++.+... .-..++|.+.++
T Consensus 9 ~~~~DP-~v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDP-DVIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCC-eEEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 455799 577899999999864311 113667899999999998877643211 113578999986
Q ss_pred EcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010183 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (516)
Q Consensus 125 ~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga 204 (516)
. .+|+++|+|+... ..+.+|++++.. -.|+... ++ ....||.+++. ++|+.||+.+.
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~~--~~-----------~~~iDp~~f~D-~dG~~Yl~~~~ 139 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKTA--LD-----------GGYHDPSLLFD-DDGTAYLVYGG 139 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCCC--cC-----------CCcccCceEEc-CCCCEEEEeCC
Confidence 4 5999999999852 346788876642 2354321 11 13579996554 78999999975
Q ss_pred eeCCccEEEEEE-cCCCCCcEEeeeccccCC--CCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 205 KINRKGLAILYR-SKDFVHWIKAKHPLHSVK--GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
. .+.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|...
T Consensus 140 ~-----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~~ 192 (269)
T cd09001 140 G-----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAWG 192 (269)
T ss_pred C-----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecCC
Confidence 3 244443 677766531111222221 13578999999876 5 8999998753
No 35
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.03 E-value=1.2e-08 Score=103.57 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=119.5
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCC--CCCC-CccCCCeEeeeEEEcCCCceEEEEc
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI--YPSQ-QSDINGCWSGSATILPGEKPAIFYT 136 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL--~P~~-~~D~~gv~SGsav~~~dg~~~l~YT 136 (516)
|| -++.++++|+||+.-.. .....++|+||+||+....++ .+.. .+...++|.+.++ ..+|+++|+|+
T Consensus 2 DP-~v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yylyys 72 (288)
T cd08980 2 DP-WVIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELH-YIDGKWYIYFA 72 (288)
T ss_pred CC-eEEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEE-EECCEEEEEEE
Confidence 89 46788899999987431 358899999999999865432 2322 1344688999986 46899999999
Q ss_pred ccCC--CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC---CccE
Q 010183 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN---RKGL 211 (516)
Q Consensus 137 g~~~--~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~---~~G~ 211 (516)
.... ...+.+++|.+++..++ +..|+.. .+++... . ..--||.++ .+ +|++||+++.... ....
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~--~----~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~ 141 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT--D----RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQN 141 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC--C----CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCcc
Confidence 7653 24466778887652123 3578874 2444222 1 123699865 43 5999999875431 2234
Q ss_pred EEEEEcCCCCCcEEeeeccccCCC------CCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeEEEEE
Q 010183 212 AILYRSKDFVHWIKAKHPLHSVKG------TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284 (516)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l~~~~~------~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y~vG~ 284 (516)
+.+.+.++...+......+..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 142 i~~~~l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 142 LYIAKMSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEEECCCCCccCCcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 556665554344311112222211 1357999999987 5 88999987654345566664
No 36
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.00 E-value=5.3e-09 Score=105.03 Aligned_cols=99 Identities=13% Similarity=0.184 Sum_probs=74.7
Q ss_pred eeEEEcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010183 121 GSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (516)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m 200 (516)
..++ ..+|+++|+||+........+++|+|+|+ ++|++.+ +|+|.++....++...++||.|+ + .+|+|||
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 3454 47999999999865556678999999983 7999975 45553321133456788999965 4 4789999
Q ss_pred EEeeee--CCccEEEEEEcCCCCCcEEeee
Q 010183 201 IIGSKI--NRKGLAILYRSKDFVHWIKAKH 228 (516)
Q Consensus 201 ~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~ 228 (516)
++++.. ....++.+++|+|+.+|++.+.
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~ 103 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGT 103 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEecc
Confidence 998865 3456899999999999998764
No 37
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=99.00 E-value=9e-09 Score=102.66 Aligned_cols=155 Identities=19% Similarity=0.244 Sum_probs=112.8
Q ss_pred cCCccEEEECCEEEEEeeeCC--CCCCCCCcEEEEEEeCCCCC-ceecC-CCCCC-CCCccCCCeEeeeEEEcCCCceEE
Q 010183 59 NDPNGVMIYKGIYHLFYQYNP--KGAVWGNIVWAHSTSKDLIN-WIPHD-PAIYP-SQQSDINGCWSGSATILPGEKPAI 133 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P--~~~~wg~~~WgHa~S~Dlvh-W~~~~-~aL~P-~~~~D~~gv~SGsav~~~dg~~~l 133 (516)
-.| ++++.++++||+|+--- +...-...|.+-|.|+|+++ |+..+ +.+.| ..++|..||....++. .+++++|
T Consensus 32 FNp-av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~m 109 (314)
T COG2152 32 FNP-AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYM 109 (314)
T ss_pred ecc-eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEE
Confidence 356 78899999999999711 01111456899999999999 99754 78999 6678889999999874 6899999
Q ss_pred EEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC---Ccc
Q 010183 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN---RKG 210 (516)
Q Consensus 134 ~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~---~~G 210 (516)
.|||.+ +..+..++|+++| +.+|+|.+ +++.+ ++||-.++=..-+|+|.|+---... ..+
T Consensus 110 tYTa~s-~~g~~~~la~t~~-----f~n~~rig--~i~~p---------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ 172 (314)
T COG2152 110 TYTAYS-DKGPRLALAVTKD-----FLNWERIG--AIFPP---------DNKDAALFPKKINGKYALLHRPVLGEYGMKG 172 (314)
T ss_pred EEEecC-CCCcccchhhhhh-----hhhhhhcc--cccCC---------CCCCceEeeEEecCcEEEEEeecccccCccC
Confidence 999985 3557788999888 57899963 44432 2455432111136889988643321 146
Q ss_pred EEEEEEcCCCCCcEEeeecccc
Q 010183 211 LAILYRSKDFVHWIKAKHPLHS 232 (516)
Q Consensus 211 ~i~ly~S~Dl~~W~~~~~~l~~ 232 (516)
-|++..|+|+.+|.....++..
T Consensus 173 niwia~S~dl~~w~~~~~~l~~ 194 (314)
T COG2152 173 NIWIAFSPDLEHWGIHRKLLGP 194 (314)
T ss_pred ceEEEEcCCccCCCccceeecc
Confidence 7999999999999876555543
No 38
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.97 E-value=2.3e-08 Score=101.37 Aligned_cols=170 Identities=15% Similarity=0.114 Sum_probs=107.1
Q ss_pred CccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEc
Q 010183 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (516)
Q Consensus 57 W~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (516)
..-|| .+++.+|+|+|+...... ...+...+|+||+||+..+.++.+. ..++|...++ ..+|+++|+|+
T Consensus 14 ~~~DP-~i~~~~~~yY~~~t~~~~-----~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yys 82 (280)
T cd09002 14 DYPDP-SILRDGEDYYMTHSSFKY-----TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYFP 82 (280)
T ss_pred CCCCC-EEEEECCEEEEEEcchhc-----CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEEE
Confidence 34599 578899999997652111 1247788999999999988777542 3578998875 57999999999
Q ss_pred ccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEE
Q 010183 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYR 216 (516)
Q Consensus 137 g~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~ 216 (516)
.......+.+.+|++++.. -.|++ |+.... ...-||.+++. ++|++||+.+... .+-|
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~~-------~~~IDp~vf~D-ddG~~Yl~~~~~~----~~~l-- 140 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLKI-------GGCIDPGHVVD-EDGNRYLFLSGGD----RVRL-- 140 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecCC-------CCccCCceEEc-CCCCEEEEECCee----EEEE--
Confidence 8754445667889886643 24654 221111 12369996655 7899999986431 1111
Q ss_pred cCCCCCcEEeeeccccC--------CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 217 SKDFVHWIKAKHPLHSV--------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 217 S~Dl~~W~~~~~~l~~~--------~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
++|+..-+-....+... ......|-|.+++.+ | +++|+.|...
T Consensus 141 ~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~YYl~yS~g~ 191 (280)
T cd09002 141 TADGLSTDGKLEHVYDGWRYPEDWVVEGFALEGPKLKKRN--G-------------YYYLTTAVGG 191 (280)
T ss_pred CccccEecCcCEEEecCcccccccccCCcccccceEEEEC--C-------------EEEEEEccCC
Confidence 23322211000111111 012246999999987 5 8999988644
No 39
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.89 E-value=4.2e-08 Score=102.94 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=124.2
Q ss_pred ccCCCCCccC------CccEEE-ECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCCC----CceecCCCCCCCCCc-c
Q 010183 51 FQPPKNWIND------PNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLI----NWIPHDPAIYPSQQS-D 114 (516)
Q Consensus 51 ~~p~~gW~ND------PnG~~~-~~G~YHLFYQ~~P~~----~~wg~~~WgHa~S~Dlv----hW~~~~~aL~P~~~~-D 114 (516)
.+.+.=|+.| +.|-+. ++|.--+|-...|.. ..|+.-|+++.-|++.. +|+..+.++...... .
T Consensus 49 ~~~~dldVWDsWPLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~ 128 (428)
T PF02435_consen 49 VMADDLDVWDSWPLQDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVP 128 (428)
T ss_dssp ECTTE-EEEEEEEEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCG
T ss_pred ccccceeeeccceeecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCc
Confidence 3444556664 445444 688777777776653 34678899999999999 999998877655431 1
Q ss_pred CCCeEeeeEEEcC-CCceEEEEcccCC--C--CceeE---E--EEEecCCCCCccceEEecCCCCcccCCCCCcC-----
Q 010183 115 INGCWSGSATILP-GEKPAIFYTGIDP--H--NRQVQ---N--LAVPKNLSDPYLREWVKSPKNPLMAPDAMNQI----- 179 (516)
Q Consensus 115 ~~gv~SGsav~~~-dg~~~l~YTg~~~--~--~~q~q---~--lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~----- 179 (516)
..--|||||++.. ||++.||||.... . ..|+. + ++.+.+ ...-+..|+++ ..++.++. ..+
T Consensus 129 ~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~-~~v~i~g~~~~--~~lfe~DG-~~Yqt~~Q 204 (428)
T PF02435_consen 129 GSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADD-DGVWITGFSNH--HELFEGDG-KHYQTYEQ 204 (428)
T ss_dssp CEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECS-TEEEEEEEEEE--EEEES--S-SSB--HHH
T ss_pred cCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCC-CceeEccccce--eEeeccch-hhhhChhh
Confidence 2346999999887 8999999998543 1 22321 1 223222 12223456654 34554330 111
Q ss_pred -CCCCCCCCEEEEeCCCCeEEEEEeeee---C------------------------------CccEEEEEEcCC--CCCc
Q 010183 180 -NTSSFRDPTTAWLGPDKRWRVIIGSKI---N------------------------------RKGLAILYRSKD--FVHW 223 (516)
Q Consensus 180 -~~~~fRDP~v~w~~~~g~w~m~~ga~~---~------------------------------~~G~i~ly~S~D--l~~W 223 (516)
....||||++|-..++|+-||+.-+.. + ..|+|.|.+.+| +..|
T Consensus 205 ~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w 284 (428)
T PF02435_consen 205 NPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVW 284 (428)
T ss_dssp HHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEE
T ss_pred cCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCcc
Confidence 125799999654336899999984432 0 157888888754 4689
Q ss_pred EEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEee
Q 010183 224 IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (516)
Q Consensus 224 ~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~ 272 (516)
+....++.+..-....|-|+++.++ | ||+|+.+.
T Consensus 285 ~~~~PL~~a~~v~de~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 285 ELLPPLLSANGVNDELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp EEEEEEEEETTTBS-EEEEEEEEET--T-------------EEEEEEEE
T ss_pred EEeCcceecccccccccCCcEEEEC--C-------------EEEEEEEe
Confidence 9886444444445689999999998 6 99997653
No 40
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.84 E-value=1.7e-07 Score=95.78 Aligned_cols=170 Identities=18% Similarity=0.150 Sum_probs=102.3
Q ss_pred cCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEccc
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI 138 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 138 (516)
-||. +++++|+|+|+-.... +..+|+||++|+..+.++. ..++|.+++. ..+|+++++|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~~----------~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~-~~~g~~Y~~~~~~ 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMSG----------GYWHSSDLIDWDFIPTNSL------PDEGYAPAVF-VYDGTLYYTASTY 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCCC----------CeEECCCcCCceECCcccC------CCCcCcCEEE-EECCEEEEEEeCC
Confidence 5994 7789999998866421 3678999999999987763 4678999986 4688866655532
Q ss_pred CCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEE---
Q 010183 139 DPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY--- 215 (516)
Q Consensus 139 ~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly--- 215 (516)
.+.+|+|++...+ -|+.. +. . ......||.+++ +++|++||+.|.... .+ |.+.
T Consensus 66 ------~~~v~~s~~p~gp---~w~~~----~~--~-----~~~~~IDp~vf~-DdDGk~Yl~~g~~~~-~~-i~~~eL~ 122 (295)
T cd08982 66 ------NSRIYKTADPLSG---PWEEV----DK--S-----FPPGLADPALFI-DDDGRLYLYYGCSNN-YP-LRGVEVD 122 (295)
T ss_pred ------CceEEEeCCCCCC---Ccccc----cc--c-----cCCCccCCceEE-CCCCCEEEEEecCCC-CC-eEEEEEC
Confidence 2457877664221 25432 10 1 112357999654 468999999875321 11 1111
Q ss_pred ---------------EcCCCCCcEEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCceeE
Q 010183 216 ---------------RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280 (516)
Q Consensus 216 ---------------~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~~~Y 280 (516)
.+..-..|+..+.-.......+..|-|-+++.+ | +++|+.|........|
T Consensus 123 ~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y 187 (295)
T cd08982 123 PDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTY 187 (295)
T ss_pred cccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcE
Confidence 222233455432111001123457889988865 5 8999988754433446
Q ss_pred EEEE
Q 010183 281 TVGT 284 (516)
Q Consensus 281 ~vG~ 284 (516)
.+|-
T Consensus 188 ~v~~ 191 (295)
T cd08982 188 ADGV 191 (295)
T ss_pred eEEE
Confidence 6554
No 41
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.75 E-value=4.9e-07 Score=90.55 Aligned_cols=191 Identities=18% Similarity=0.311 Sum_probs=121.6
Q ss_pred ccCCCCC---ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCC----CCCCccCCCeEeeeE
Q 010183 51 FQPPKNW---INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSA 123 (516)
Q Consensus 51 ~~p~~gW---~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~----P~~~~D~~gv~SGsa 123 (516)
..|+.|| +.|| -+++++|+||+|-..+.. . .|+-+-+. |++|++++-|+. +.. ...+.|...+
T Consensus 14 ~~pk~~~~~~lkDP-tiv~~nGkYyvYgT~~~~-~-----~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqV 83 (303)
T cd08987 14 ISPKSDWIVAIKDP-TVVYYNGRYHVYATTADA-G-----NYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQV 83 (303)
T ss_pred ccCCCCCeeeecCC-eEEEECCEEEEEEccCCC-C-----Cceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEE
Confidence 4577899 6899 467899999999876431 2 24333333 999998886652 222 2345777876
Q ss_pred E-EcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010183 124 T-ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (516)
Q Consensus 124 v-~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ 202 (516)
. ..++++++|+|+.. ..++|+|+|..+|+ .|... .|++... ........-|+.|+ . ++++.||+.
T Consensus 84 fyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P~--~ws~~--qpl~~~~--~~~~~~~~ID~~vI-~-Dd~~~YLff 149 (303)
T cd08987 84 FYFAPQNKWYLIYQWW------PAAYSTNSDISNPN--GWSAP--QPLFSGT--PNGSPGGWIDFWVI-C-DDTNCYLFF 149 (303)
T ss_pred eeeccCCEEEEEEecC------ceEEEeCCCCCCCC--ccCCC--cccccCc--ccCCCCCccceeEE-e-CCCCEEEEE
Confidence 4 14689999999952 24689999988774 57764 5777432 11233456899974 3 578888887
Q ss_pred eeeeCCccEEEEEEcC-CCCCcEEe-ee--cccc-CCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCCCCc
Q 010183 203 GSKINRKGLAILYRSK-DFVHWIKA-KH--PLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (516)
Q Consensus 203 ga~~~~~G~i~ly~S~-Dl~~W~~~-~~--~l~~-~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~~~ 277 (516)
.. ..| .||+|+ .+.+.... +. .+.. .......|-|.+++++ |. .+++|+++..+...
T Consensus 150 ~~---dnG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G~-----------~~YlmiveA~g~~~ 211 (303)
T cd08987 150 SD---DNG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--GQ-----------NQYLLIVEAIGSDG 211 (303)
T ss_pred ec---CCC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--CC-----------eEEEEEEEecCCCC
Confidence 54 234 477763 22222100 01 1111 1234679999999997 52 38999999876534
Q ss_pred eeEEEE
Q 010183 278 EYYTVG 283 (516)
Q Consensus 278 ~~Y~vG 283 (516)
.-|+++
T Consensus 212 ~rYfrs 217 (303)
T cd08987 212 GRYFRS 217 (303)
T ss_pred CCeEEE
Confidence 457777
No 42
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.72 E-value=1.2e-07 Score=96.29 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=82.0
Q ss_pred cCCccEEEECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCC-CCcee-cCCCCCCCC-CccCCCeEeeeEEEcCCCce
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDL-INWIP-HDPAIYPSQ-QSDINGCWSGSATILPGEKP 131 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~----~~wg~~~WgHa~S~Dl-vhW~~-~~~aL~P~~-~~D~~gv~SGsav~~~dg~~ 131 (516)
-+| .+++++|+|||||..+... ...+...+|+|+|+|+ -+|++ ..++|.|.. .||..+++.++++...+|++
T Consensus 81 ~~P-~vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNP-TIKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCC-eEEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 478 4678899999999987531 1223568999999994 69998 456777764 37778899999876558999
Q ss_pred EEEEcccCCC---CceeEEEEEecCCCCCccceEEecCCCCcc
Q 010183 132 AIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (516)
Q Consensus 132 ~l~YTg~~~~---~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi 171 (516)
+|+|+|.... ..+.|++|+|+|.. .+|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999997642 45788999998752 479998666665
No 43
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.69 E-value=4.9e-07 Score=91.23 Aligned_cols=133 Identities=20% Similarity=0.208 Sum_probs=86.6
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecC--CCCCCCCCccCCCeEeeeEEEcC-CCceEEE
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD--PAIYPSQQSDINGCWSGSATILP-GEKPAIF 134 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~--~aL~P~~~~D~~gv~SGsav~~~-dg~~~l~ 134 (516)
+-.|+ +++.+|+|||||..+... .......++|+|+|+++|+..+ +.+.+...++...+-...++.+. +|+++|+
T Consensus 62 ~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~ 139 (280)
T cd08995 62 IGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWML 139 (280)
T ss_pred ceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEE
Confidence 44563 567899999999976432 1134579999999999999865 33433333333334456665543 5899999
Q ss_pred EcccCC----CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee
Q 010183 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (516)
Q Consensus 135 YTg~~~----~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~ 206 (516)
|.+... ...-...++.|+| |++|+.. .+++.+. . ...+--|.+ ++ .+|+|||+++.+.
T Consensus 140 ~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~--~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 140 LATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPG--L---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCC--C---cceeecceE-EE-ECCEEEEEEEecc
Confidence 976542 2334566777776 6899975 4665432 1 123667874 44 4789999998753
No 44
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.52 E-value=1.3e-05 Score=81.44 Aligned_cols=157 Identities=13% Similarity=0.112 Sum_probs=93.3
Q ss_pred CCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-CceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010183 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 56 gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
+.+..| -+++.+|+|||||...... .....+++|+|+|.. .|+..+..+.+.. ..+..++++.+.||+++|+
T Consensus 53 ~~~waP-~v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~ 125 (294)
T cd08991 53 RGFWAP-EVYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLY 125 (294)
T ss_pred CcEEcc-EEEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEE
Confidence 345678 5889999999999976433 235678999999987 7887654333321 2345688887778999999
Q ss_pred EcccCCCC--ceeEEEEEecCCCCCccceEEecCC---CCcccC-------C-CC-CcCCCCCCCCCEEEEeCCCCeEEE
Q 010183 135 YTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPK---NPLMAP-------D-AM-NQINTSSFRDPTTAWLGPDKRWRV 200 (516)
Q Consensus 135 YTg~~~~~--~q~q~lA~s~D~~d~~l~~w~k~~~---nPvi~~-------~-~~-~~~~~~~fRDP~v~w~~~~g~w~m 200 (516)
|+...... ...+..+.+.| +.+|..... .|+..+ + .. ......-.--|.++ + .+|+|||
T Consensus 126 ~~~~~~~~~~~~i~~~~l~~d-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yyl 198 (294)
T cd08991 126 YSRNNYGNRVSDIYGTELVDD-----KLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYYL 198 (294)
T ss_pred EEecCCCCcccceEEEEEccc-----eeeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEEE
Confidence 98654321 23344456555 244542111 122211 0 00 00111223467754 4 4789999
Q ss_pred EEeeeeC-Cc-cEEEEEEcCCC-CCcEEe
Q 010183 201 IIGSKIN-RK-GLAILYRSKDF-VHWIKA 226 (516)
Q Consensus 201 ~~ga~~~-~~-G~i~ly~S~Dl-~~W~~~ 226 (516)
++.+... .. =.+.+++|+++ -.|+..
T Consensus 199 ~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 199 TYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 9875431 11 14677888874 689864
No 45
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.52 E-value=7.9e-06 Score=82.28 Aligned_cols=155 Identities=11% Similarity=0.027 Sum_probs=95.7
Q ss_pred CCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-CceecCCC-CCCCCCccCCCeEeeeEEEcCCCceE
Q 010183 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPA-IYPSQQSDINGCWSGSATILPGEKPA 132 (516)
Q Consensus 55 ~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~~~~a-L~P~~~~D~~gv~SGsav~~~dg~~~ 132 (516)
.+-+.-|. +++++|+|||||..... .+....|+|+|+|.. .|+..... +.+ ...+...+..++++++.||+++
T Consensus 61 ~~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 61 KGQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred cCCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 34456784 78899999999998643 235679999999976 79987543 322 1222344567888777789999
Q ss_pred EEEcccCCCCceeEEEE-EecCCCCCccceEEecCCCCcccCCC-CCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCcc
Q 010183 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDA-MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (516)
Q Consensus 133 l~YTg~~~~~~q~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~~~-~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G 210 (516)
|+|.+. +...++ .+.| +.+|+.. ..+|..+. ........+--|.+ ++ .+|+|||++++.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--Cc
Confidence 999864 223444 3333 4566542 12332110 00111122356875 45 5899999998743 35
Q ss_pred EEEEEEcCCCC-CcEEeeecc
Q 010183 211 LAILYRSKDFV-HWIKAKHPL 230 (516)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~~l 230 (516)
.+.+.+|+++. .|+..+.++
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEEcCCCCCCcccCcEEe
Confidence 67777888875 576554433
No 46
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.47 E-value=5.1e-06 Score=82.57 Aligned_cols=156 Identities=13% Similarity=0.110 Sum_probs=97.0
Q ss_pred CCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010183 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 55 ~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
.+-+.+|. +++++|+|||||.....+ ......+.|+|+|+.+|....... +... ...++..++++.+++|+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEEE
Confidence 45677894 789999999999987642 234579999999999987653211 1111 224577889887777999999
Q ss_pred EcccCCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC--CccE
Q 010183 135 YTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGL 211 (516)
Q Consensus 135 YTg~~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~--~~G~ 211 (516)
|.+.... ......++.+.+. ..|.. ..+++... .......+-.|.+ ++ .+|+|||++.+... ..-.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~--~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~ 199 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSAS--SGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYN 199 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeee--eccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCce
Confidence 9875421 2234555655542 12222 22332111 1112234568985 45 47999999876532 2346
Q ss_pred EEEEEcCCCC-CcEEe
Q 010183 212 AILYRSKDFV-HWIKA 226 (516)
Q Consensus 212 i~ly~S~Dl~-~W~~~ 226 (516)
+.+++|++.. .|+..
T Consensus 200 ~~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 200 IGYATSDSIDGPYVKK 215 (271)
T ss_pred EEEEECCCCCCCcCcC
Confidence 7788998874 46643
No 47
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.46 E-value=5.5e-06 Score=83.61 Aligned_cols=154 Identities=16% Similarity=0.164 Sum_probs=96.5
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-CceecCCCC-C-CCCCccCCCeEeeeEEEcCCCceEEE
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAI-Y-PSQQSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~~~~aL-~-P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
+..| -+++++|+|||||..+-.+ .....+|+|+|+|.. .|+..+..+ . |.. ..++...++++++||+++|+
T Consensus 62 ~waP-~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~ 135 (287)
T cd08999 62 FWAP-DVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLV 135 (287)
T ss_pred ccCc-eEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEE
Confidence 4467 4788999999999977543 235679999999965 899865332 2 222 23456678877668999999
Q ss_pred EcccCCC--CceeEEEE-EecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee--CC-
Q 010183 135 YTGIDPH--NRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NR- 208 (516)
Q Consensus 135 YTg~~~~--~~q~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~--~~- 208 (516)
|.+.... ..+.+.++ .+.| +.+|+... ..++.+. ..+....+--|.++ + .+|+|||++++.. ..
T Consensus 136 ~~~~~~~~~~~~~i~~~~ls~d-----~~~~~~~~-~~i~~~~--~~~~~~~~EgP~i~-k-~~g~yyl~~S~~~~~~~~ 205 (287)
T cd08999 136 WKSDGNSIGKPTPIYLQELSAD-----GLTLTGEP-VRLLRND--EDWEGPLVEAPYLV-K-RGGYYYLFYSAGGCCSGA 205 (287)
T ss_pred EeccCCCCCCCceEEEEEeCCC-----CccccCCc-Eeeeccc--ccccCCceEeeEEE-E-ECCEEEEEEEcCCccCCC
Confidence 9764321 12223444 4444 35665431 2233322 22233346678854 5 4899999997653 11
Q ss_pred -ccEEEEEEcCCCC-CcEEee
Q 010183 209 -KGLAILYRSKDFV-HWIKAK 227 (516)
Q Consensus 209 -~G~i~ly~S~Dl~-~W~~~~ 227 (516)
.=++.+++|+++. .|+...
T Consensus 206 ~~y~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 206 STYAVGVARSKSLLGPYVKAP 226 (287)
T ss_pred CCEEEEEEEeCCCcCCcCCCC
Confidence 2257789999987 888654
No 48
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.43 E-value=2.9e-06 Score=87.32 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=77.8
Q ss_pred CCCeEeeeEEEcCCCc-eEEEEcccCCCCce-eEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEe
Q 010183 115 INGCWSGSATILPGEK-PAIFYTGIDPHNRQ-VQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192 (516)
Q Consensus 115 ~~gv~SGsav~~~dg~-~~l~YTg~~~~~~q-~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~ 192 (516)
...+|...|++..++. ++|+|.+....... ..++|.|.|+ .+|++. .+||+.+. ..++....-||-|+..
T Consensus 29 ~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~--~~~e~~GvEDPRVt~i 100 (312)
T PF04041_consen 29 PNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPD--TDYEEWGVEDPRVTKI 100 (312)
T ss_dssp SSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE---SSTTHTEEEEEEEEEE
T ss_pred cceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccC--CCCcccCccceeEEEE
Confidence 4569999987644442 89999876554444 8999999985 789987 47999765 4455567889998765
Q ss_pred CCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeee
Q 010183 193 GPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKH 228 (516)
Q Consensus 193 ~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~ 228 (516)
+++|||++.+......++.+.+|+|+.+|+..+.
T Consensus 101 --~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 --DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp --TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred --CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 5799999998876666889999999999998874
No 49
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.38 E-value=1.4e-06 Score=88.25 Aligned_cols=89 Identities=20% Similarity=0.330 Sum_probs=63.7
Q ss_pred CCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee-----CCccEEEEEEcCCCCCcEEeeeccccC-CCCCcee
Q 010183 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NRKGLAILYRSKDFVHWIKAKHPLHSV-KGTGMWE 240 (516)
Q Consensus 167 ~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~-~~~~~wE 240 (516)
++|||.+. . ....+|||+|++..++|+|||+..... .....|.+|+|+||++|+..+..+... ..+.+|
T Consensus 5 ~~pvl~~~--~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W- 79 (276)
T cd08983 5 GNPVLTST--A--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW- 79 (276)
T ss_pred CceEEeCC--c--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-
Confidence 68999754 2 347799999876546889999876532 123368899999999999876433222 234467
Q ss_pred cCceEEecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 241 CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 241 CPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
||+++.....| +|+|.+|..
T Consensus 80 APev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 80 APEAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred CccceEcCCCC-------------eEEEEEecc
Confidence 99999886444 899988864
No 50
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.38 E-value=3.3e-06 Score=85.08 Aligned_cols=121 Identities=17% Similarity=0.174 Sum_probs=72.0
Q ss_pred CCCCEEEEeCCCCeEEEEEeeeeC---------CccEEEEEEcCCCCCcEEeeeccccCC--------------CCCcee
Q 010183 184 FRDPTTAWLGPDKRWRVIIGSKIN---------RKGLAILYRSKDFVHWIKAKHPLHSVK--------------GTGMWE 240 (516)
Q Consensus 184 fRDP~v~w~~~~g~w~m~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 240 (516)
||||+|++ +.+|.|||+..+... ..+.|.+|+|+||++|+..+..+.... .....+
T Consensus 2 ~rDP~v~~-~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTL-GPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEe-cCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 79999654 457888888765421 124588999999999998765443211 123455
Q ss_pred cCceEEecCCCCCCccccCCCCCceEEEEEeeCCC--CceeEEEEEEeCCCCeeecCCCCCCCCCceecccCCCccceeE
Q 010183 241 CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT--KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTF 318 (516)
Q Consensus 241 CPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~~--~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~fYA~~t~ 318 (516)
||+++.++ | ||+|.+|.... ......+..-+...+.|+..... ..+. .-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPLF--PGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCCC--CccCCceE
Confidence 99999987 6 89998886531 11223333323333455432110 0011 12346677
Q ss_pred ecCCCCcEEEE
Q 010183 319 FDGAKNRRVLW 329 (516)
Q Consensus 319 ~d~~~gRri~~ 329 (516)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 775 6777665
No 51
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.35 E-value=1.5e-05 Score=79.51 Aligned_cols=156 Identities=14% Similarity=0.128 Sum_probs=99.4
Q ss_pred CCccCCccEEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCC-ceecC--CCCCCC--CCccCCCeEeeeEEEcCCC
Q 010183 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN-WIPHD--PAIYPS--QQSDINGCWSGSATILPGE 129 (516)
Q Consensus 56 gW~NDPnG~~~~~-G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlvh-W~~~~--~aL~P~--~~~D~~gv~SGsav~~~dg 129 (516)
+-+..|. +++.+ |+|+|||..... ..+....+.|+|+|+.. |+... +.+ +. ...+...+..++++.+.+|
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dp~v~~d~dG 133 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVL-PDNPPAADVSNFRDPFVFEDDDG 133 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccc-cCCCCccccccccCCeEEEcCCC
Confidence 4466784 66777 999999998643 22456799999999975 56432 222 22 1223345678888776669
Q ss_pred ceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC--
Q 010183 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-- 207 (516)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~-- 207 (516)
+++|+|.+........+.+|.|+|. .+|++....+++... .....+.-|.++ + .+|+|||++++...
T Consensus 134 ~~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~----~~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~ 202 (286)
T cd08772 134 KWYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEG----EGGKQIEGPGLL-K-KNGKYYLFYSINGTGR 202 (286)
T ss_pred CEEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeec----cCCCceeccEEE-E-ECCEEEEEEEcCCCcC
Confidence 9999998765333456788888773 678875322222211 123456789865 4 47899999987541
Q ss_pred --CccEEEEEEcCC-CCCcEEe
Q 010183 208 --RKGLAILYRSKD-FVHWIKA 226 (516)
Q Consensus 208 --~~G~i~ly~S~D-l~~W~~~ 226 (516)
..-.+.+++|++ +-.|+..
T Consensus 203 ~~~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 203 VDSTYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCCCcceEEEEccCCCCCcccC
Confidence 223566777865 4456543
No 52
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=98.33 E-value=9.6e-07 Score=73.28 Aligned_cols=64 Identities=30% Similarity=0.379 Sum_probs=46.4
Q ss_pred cceEEEEEEcCCCceeEEEEEEEEeCCCCceEEEEEecCCCCCCCCCCCCCeeeEEEEE---cCCCCeEEEEEeeC
Q 010183 444 GPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGAFLNV---DPVYEKLSLRSLVS 516 (516)
Q Consensus 444 ~~~gl~v~~s~~~~e~T~i~~~~~~~~~~~~~~~~~~Dr~~Ss~~~~~~~~~~~g~~~~---~~~~~~l~LRilvD 516 (516)
.+|||.++++++..|+|.|+|+.... .+++||++|+... ....++..+.. ...++.++||||||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~~-------~l~vDR~~s~~~~--~~~~~~~~~~~~~~~~~~~~l~L~i~vD 75 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPANG-------TLTVDRTNSGIND--FSEEFGTFVRSAPLDLGDKILKLRIFVD 75 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTTT-------EEEEEETTSSTTS--CCCEEEEEEEEEETTTTESEEEEEEEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCCC-------EEEEeCCCCcccc--cccccCcceEEeeccCCCCcEEEEEEEe
Confidence 47999999999999999999995432 2689999999333 34445553332 22335689999998
No 53
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.27 E-value=1.2e-05 Score=80.90 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=56.0
Q ss_pred CCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeeeccccC---------CCCCc
Q 010183 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV---------KGTGM 238 (516)
Q Consensus 168 nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~ 238 (516)
||||.. ++.||.|+. .++.|||+.++..... .+.+|+|+||.+|+..+..+... ...++
T Consensus 1 NPvi~~---------~~~DP~ii~--~~~~yY~~~t~~~~~~-g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~ 68 (269)
T cd08989 1 NPILKG---------DNPDPSIIR--AGDDYYMASSTFEWFP-GVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGI 68 (269)
T ss_pred CCcCCC---------CCCCCcEEE--ECCeEEEEECccccCC-CcEEEECCccCCCEEccccccCccccccccCCCCCcE
Confidence 688842 368999764 3688999976533223 37899999999999876544321 12346
Q ss_pred eecCceEEecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 239 wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
| +|+++..+ | ||+|.++..
T Consensus 69 W-AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 69 W-APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred E-cceEEEEC--C-------------EEEEEEecc
Confidence 7 99999987 6 899988864
No 54
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.20 E-value=3e-05 Score=78.65 Aligned_cols=78 Identities=19% Similarity=0.391 Sum_probs=56.4
Q ss_pred CCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeeeccccCCCCCceecCceEE
Q 010183 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246 (516)
Q Consensus 167 ~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~ 246 (516)
.||||.. .+.||.|++ .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+. ....++| +|+++.
T Consensus 7 ~nPv~~~---------~~~DP~i~~--~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~ 72 (280)
T cd09002 7 RNPILAG---------DYPDPSILR--DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCK 72 (280)
T ss_pred eCCccCC---------CCCCCEEEE--ECCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEE
Confidence 4899852 267999764 3689999765422 233588999999999998764442 2345689 899999
Q ss_pred ecCCCCCCccccCCCCCceEEEEEeeC
Q 010183 247 VSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (516)
Q Consensus 247 l~~~g~~g~~~s~~~~~~k~vl~~S~~ 273 (516)
.+ | |++|.++..
T Consensus 73 ~~--g-------------kyy~yys~~ 84 (280)
T cd09002 73 YD--G-------------RYYIYFPAI 84 (280)
T ss_pred EC--C-------------EEEEEEEee
Confidence 87 6 899988864
No 55
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.18 E-value=1.8e-05 Score=80.44 Aligned_cols=132 Identities=14% Similarity=0.076 Sum_probs=86.5
Q ss_pred CCccEEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeC-CCCCceecCC--CCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010183 60 DPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSK-DLINWIPHDP--AIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (516)
Q Consensus 60 DPnG~~~~~-G~YHLFYQ~~P~~~~wg~~~WgHa~S~-DlvhW~~~~~--aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (516)
.++ ++..+ |+|+|||..+......+....++|+|+ |+++|++.+. ++.|. ..+..+.-...++. .+|+++|+|
T Consensus 65 sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~-~~~~~~~RDP~V~~-~~g~~~m~~ 141 (298)
T cd08996 65 SGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPP-DGYTTHFRDPKVFW-HDGKWYMVL 141 (298)
T ss_pred eCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCC-CCCCCcccCCeEEe-ECCEEEEEE
Confidence 453 33456 999999997653211235678999999 8999998753 23222 22334556777764 569999999
Q ss_pred cccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCC--CeEEEEEeeee
Q 010183 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD--KRWRVIIGSKI 206 (516)
Q Consensus 136 Tg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~--g~w~m~~ga~~ 206 (516)
++..........++.|+| |++|+.. .+++... +.....+--|.+ ++ -+ ++|+|+++...
T Consensus 142 g~~~~~~~~~i~ly~S~D-----l~~W~~~--~~~~~~~---~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 142 GAGTEDGTGRILLYRSDD-----LKNWEYL--GELLTSL---GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred EEEecCCCcEEEEEECCC-----CCCCEEc--ceecccC---CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 987544455677888887 5899985 3443211 112345778985 44 46 89999998754
No 56
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.15 E-value=3.6e-05 Score=78.49 Aligned_cols=78 Identities=14% Similarity=0.156 Sum_probs=55.9
Q ss_pred CCCCCCEEEEeCCCCeEEEEEeeeeCC----ccEEEEEEcCCCCCcEEeeeccccCC---CCCceecCceEEecCCCCCC
Q 010183 182 SSFRDPTTAWLGPDKRWRVIIGSKINR----KGLAILYRSKDFVHWIKAKHPLHSVK---GTGMWECPDFFPVSTYGLNG 254 (516)
Q Consensus 182 ~~fRDP~v~w~~~~g~w~m~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wECPdlf~l~~~g~~g 254 (516)
..+|||+|++..++|+|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|++...+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 458999988765689999998764311 12478999999999998765443221 12356789999886 5
Q ss_pred ccccCCCCCceEEEEEeeCC
Q 010183 255 LDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 255 ~~~s~~~~~~k~vl~~S~~~ 274 (516)
||+|.+|...
T Consensus 79 ----------~yyly~s~~~ 88 (291)
T cd08981 79 ----------RYYMFATFHN 88 (291)
T ss_pred ----------EEEEEEEecc
Confidence 8999887643
No 57
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.13 E-value=6.7e-05 Score=76.10 Aligned_cols=154 Identities=14% Similarity=0.092 Sum_probs=91.8
Q ss_pred CCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC--CCceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010183 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL--INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (516)
Q Consensus 55 ~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dl--vhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 132 (516)
.+-+..| -+++.+|+|||||..+..+. +....++|+|+|+ -.|+..++++.+........+..+++++++||+++
T Consensus 55 ~~~~wAP-~v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 55 SGNLWAP-DVIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCCccCC-eEEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 4456678 47789999999999765332 3457899999998 79999776665543222345667888877789999
Q ss_pred EEEcccCCCCceeEEEE-EecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee-C---
Q 010183 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N--- 207 (516)
Q Consensus 133 l~YTg~~~~~~q~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~-~--- 207 (516)
|+|.+... .+.++ .+.|.+.+ ..+... ...++..+ . .....-.|++ ++ .+|+|||++++.. .
T Consensus 132 l~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~--~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~ 198 (288)
T cd08998 132 LSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRP--R--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGE 198 (288)
T ss_pred EEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccC--C--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCC
Confidence 99975421 12233 22332211 122110 00112111 0 1122468885 45 4799999986532 1
Q ss_pred Ccc-EEEEEEcCCCC-CcE
Q 010183 208 RKG-LAILYRSKDFV-HWI 224 (516)
Q Consensus 208 ~~G-~i~ly~S~Dl~-~W~ 224 (516)
..+ ++.+++|+++. -|+
T Consensus 199 ~~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 199 DSTYNIRVGRSKSITGPYV 217 (288)
T ss_pred CCceEEEEEEcCCCCCCcC
Confidence 122 57889998864 465
No 58
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.95 E-value=0.00051 Score=69.16 Aligned_cols=141 Identities=8% Similarity=0.027 Sum_probs=85.2
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-Ccee-cC-CCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIP-HD-PAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~-~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (516)
+.=| -+++++|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. .......++++.+.||+++|+
T Consensus 66 ~wAP-~v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~ 134 (275)
T cd09004 66 AWAP-SVIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLY 134 (275)
T ss_pred cCCC-eEEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEE
Confidence 3457 4788999999999865 358999999975 7887 33 3343321 123456678877778999999
Q ss_pred EcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC--CccEE
Q 010183 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLA 212 (516)
Q Consensus 135 YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~--~~G~i 212 (516)
|.+.. ....+..+.| +.+|+... .++... . ..-+--|.+ ++ .+|+|||++++... ..-++
T Consensus 135 ~~~~~----~~~i~~l~~d-----~~~~~~~~--~~~~~~--~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~ 196 (275)
T cd09004 135 WGGWG----HCNVAKLNED-----MISFDGER--DGSEIT--P---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHV 196 (275)
T ss_pred EcCcC----CEEEEEECCC-----cccccCcc--eeeecc--C---CCceecceE-EE-ECCEEEEEEECCCCCCCCceE
Confidence 97531 1112233444 34555321 121111 1 113567875 45 47899999877532 12256
Q ss_pred EEEEcCCCC-CcEEee
Q 010183 213 ILYRSKDFV-HWIKAK 227 (516)
Q Consensus 213 ~ly~S~Dl~-~W~~~~ 227 (516)
.+++|++.. -|+...
T Consensus 197 ~ya~s~~~~GP~~~~~ 212 (275)
T cd09004 197 AYAMADSPLGPFERPG 212 (275)
T ss_pred EEEEcCCCCCCcccCC
Confidence 778888764 477644
No 59
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.91 E-value=0.00011 Score=79.36 Aligned_cols=135 Identities=10% Similarity=0.065 Sum_probs=81.5
Q ss_pred CCccEEEECCEEEEEeeeCCCCCCCC-CcEEEEEEeCCCCCceecC-CCCCCCCCccCCCeEeeeEEEcCCCceEEEEcc
Q 010183 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (516)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~wg-~~~WgHa~S~DlvhW~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 137 (516)
.++ ++..+|++||||..+.....+. ...-++|+|+|+.+|+..+ ++|.+.......+.-...+. ..+|+++|++.+
T Consensus 88 sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~-~~~g~~~M~~g~ 165 (445)
T TIGR01322 88 SGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVW-KHNGHWYMVIGA 165 (445)
T ss_pred ECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEE-eECCEEEEEEEE
Confidence 453 3458999999999875322222 2335689999999999876 45654322111223345554 467899999977
Q ss_pred cCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCC-cCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010183 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN-QINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (516)
Q Consensus 138 ~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~-~~~~~~fRDP~v~w~~~~g~w~m~~ga~ 205 (516)
..........+..|+| |++|+.. .++..+...+ +.....|--|- +++ -+++|+|+++..
T Consensus 166 ~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 166 QTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred ecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 5433223345666666 6899986 3555322000 11112467887 444 478999998754
No 60
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.89 E-value=0.00033 Score=73.01 Aligned_cols=154 Identities=15% Similarity=0.149 Sum_probs=93.3
Q ss_pred CccEEEECCEEEEEeeeCCCCCC---CCCcEEEEEEeCCC----CCceecCCCCCCCCC-cc-------------CCCeE
Q 010183 61 PNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDL----INWIPHDPAIYPSQQ-SD-------------INGCW 119 (516)
Q Consensus 61 PnG~~~~~G~YHLFYQ~~P~~~~---wg~~~WgHa~S~Dl----vhW~~~~~aL~P~~~-~D-------------~~gv~ 119 (516)
+..++..+|+|||||..+-.... .-....++++|+|+ ..|+...+.+.++.. |+ ....-
T Consensus 74 Gsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fR 153 (349)
T cd08997 74 GSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFR 153 (349)
T ss_pred ceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCccc
Confidence 43333346999999998743111 12456899999998 455444445555532 22 11223
Q ss_pred eeeEEEcC-CCceEEEEcccCCCC---------------------------ceeEEEEEecCCCCCccceEEecCCCCcc
Q 010183 120 SGSATILP-GEKPAIFYTGIDPHN---------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (516)
Q Consensus 120 SGsav~~~-dg~~~l~YTg~~~~~---------------------------~q~q~lA~s~D~~d~~l~~w~k~~~nPvi 171 (516)
.+.++.++ +|+.+|+++++.... .-.++||++++. .|.+|+-. .|++
T Consensus 154 DP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~ 228 (349)
T cd08997 154 DPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLL 228 (349)
T ss_pred CCEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--Cccc
Confidence 45555544 588999999865421 124567776642 26789976 4888
Q ss_pred cCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC-------CccEEEEEEcCCCC-CcEE
Q 010183 172 APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-------RKGLAILYRSKDFV-HWIK 225 (516)
Q Consensus 172 ~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 225 (516)
.+. +. ...+-.|.++ + .+|+|||+..++.. +...+..|.|+++. .|+.
T Consensus 229 ~a~---~v-~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 229 EAN---GV-NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred cCC---Cc-CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 654 11 2347899854 4 48999999875532 12246677888875 5653
No 61
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.75 E-value=0.0023 Score=64.36 Aligned_cols=147 Identities=10% Similarity=0.090 Sum_probs=88.8
Q ss_pred CCccCCccEEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-CceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010183 56 NWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (516)
Q Consensus 56 gW~NDPnG~~~~--~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 132 (516)
+.+.-| -++|. +|+|||||..+..+ .+....|+|+|++-. .|+.++..+ |. ......+++.+++||+.+
T Consensus 63 ~~~waP-~v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Y 134 (265)
T cd08985 63 RIIERP-KVIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAY 134 (265)
T ss_pred cEEECC-eEEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEE
Confidence 345566 36664 69999999987522 245689999998865 588765433 21 133466888888899999
Q ss_pred EEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC-CccE
Q 010183 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGL 211 (516)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~-~~G~ 211 (516)
|+|.+.. .+...++.-++ | +..+. +.+..... ......|. +++ .+|.|||+.+.... ....
T Consensus 135 l~~~~~~---~~~i~i~~L~~--d--~~~~~---~~~~~~~~------~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~ 196 (265)
T cd08985 135 LLYSDRD---NSDLYIYRLTD--D--YLSVT---GEVTTVFV------GAGREAPA-IFK-RNGKYYLLTSGLTGWNPND 196 (265)
T ss_pred EEEecCC---CCceEEEEeCC--C--ccccc---ceEEEccC------CCccccce-EEE-ECCEEEEEEccCCCccCCc
Confidence 9998643 12334443322 1 22332 22221111 12356888 456 57999999876431 1224
Q ss_pred EEEEEcCCCC-CcEEeee
Q 010183 212 AILYRSKDFV-HWIKAKH 228 (516)
Q Consensus 212 i~ly~S~Dl~-~W~~~~~ 228 (516)
+..++|+++. .|+..+.
T Consensus 197 ~~y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 197 ARYATATSILGPWTDLGN 214 (265)
T ss_pred eEEEEecCCCCCccccCc
Confidence 6678888774 6776543
No 62
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.00066 Score=73.37 Aligned_cols=141 Identities=22% Similarity=0.326 Sum_probs=82.2
Q ss_pred EEEEeCCCCCceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCceEEEEcccCCCC---ceeEEEEEecCCCCCcc
Q 010183 90 AHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEKPAIFYTGIDPHN---RQVQNLAVPKNLSDPYL 159 (516)
Q Consensus 90 gHa~S~DlvhW~~~~~aL~P~~~-------~D~~gv~SGsav~~~dg~~~l~YTg~~~~~---~q~q~lA~s~D~~d~~l 159 (516)
.-+.|+||+||+...-.|.+... -+..|||..++. .+||+++|+||.+.... +...+..++.+..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 44679999999998766665532 245789999986 79999999998765421 22222333322211
Q ss_pred ceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCC------ccEEEEEEcC---CCCCcEEeeecc
Q 010183 160 REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR------KGLAILYRSK---DFVHWIKAKHPL 230 (516)
Q Consensus 160 ~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~------~G~i~ly~S~---Dl~~W~~~~~~l 230 (516)
-.|.. |+..+. ..--||.++ .+++|+-||+.++...+ .+.++-+.++ -|..+.+ + .+
T Consensus 132 G~WsD----pi~l~~-------~~~iDPslf-~D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~ 197 (549)
T COG3507 132 GPWSD----PIKLNG-------SNAIDPSLF-FDKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-II 197 (549)
T ss_pred CCccc----ceecCC-------cCccCCcee-ecCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-eE
Confidence 24543 333211 123599965 55789999998875422 2333333332 2334422 2 22
Q ss_pred ccCCCCCceecCceEEec
Q 010183 231 HSVKGTGMWECPDFFPVS 248 (516)
Q Consensus 231 ~~~~~~~~wECPdlf~l~ 248 (516)
..+.....-|-|-+++.+
T Consensus 198 ~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 198 FDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred eccCCCccccCceeeccC
Confidence 333344578999888876
No 63
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.68 E-value=0.00029 Score=76.04 Aligned_cols=131 Identities=12% Similarity=0.127 Sum_probs=79.5
Q ss_pred EEEECCEEEEEeeeCC-CCC--CCCCc-EEEEEEeCCCCCceec--CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcc
Q 010183 64 VMIYKGIYHLFYQYNP-KGA--VWGNI-VWAHSTSKDLINWIPH--DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (516)
Q Consensus 64 ~~~~~G~YHLFYQ~~P-~~~--~wg~~-~WgHa~S~DlvhW~~~--~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 137 (516)
++..+|+|||||.-+- ... ..+.. .-.+|+|+|+++|+.. .++|.+...+.....-...++...+|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4457888999999763 211 12222 2367889999999997 3666553322222233455544434689999987
Q ss_pred cCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCC-----eEEEEEeee
Q 010183 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK-----RWRVIIGSK 205 (516)
Q Consensus 138 ~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g-----~w~m~~ga~ 205 (516)
...+..-.+.++.|+| |++|+.. .++..++ .+.....|-.|-. +. -++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~--~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTD-----LKNWTLL--GELLHSG--VGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCC-----cccCeEC--CcccccC--CCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 5544445577788876 6899985 3555431 1111135677863 33 344 899998875
No 64
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00044 Score=69.62 Aligned_cols=114 Identities=16% Similarity=0.255 Sum_probs=84.1
Q ss_pred CCCCCCC--CccCC----CeEeeeEEEcCCCceEEEEccc-----CCCCceeEEEEEecCCCCCccce-EEecCCCCccc
Q 010183 105 PAIYPSQ--QSDIN----GCWSGSATILPGEKPAIFYTGI-----DPHNRQVQNLAVPKNLSDPYLRE-WVKSPKNPLMA 172 (516)
Q Consensus 105 ~aL~P~~--~~D~~----gv~SGsav~~~dg~~~l~YTg~-----~~~~~q~q~lA~s~D~~d~~l~~-w~k~~~nPvi~ 172 (516)
+.|.|.. .+++. ++|.++++. .+++++|+|... .........+|.|+|+ .+ |++.+ +|++.
T Consensus 12 pIi~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~ 84 (314)
T COG2152 12 PIITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLW 84 (314)
T ss_pred CceeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEe
Confidence 4455553 34445 789998865 688899998872 2235567789999986 44 99875 69986
Q ss_pred C-CCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeeec
Q 010183 173 P-DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHP 229 (516)
Q Consensus 173 ~-~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 229 (516)
| . ..++....-||-|+. .+++|+|.+.+..+.+.+..+..++|+.+|++.+..
T Consensus 85 P~~--~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i 138 (314)
T COG2152 85 PAN--YPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAI 138 (314)
T ss_pred cCC--CchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccc
Confidence 6 3 234556778999754 479999999998666667889999999999987643
No 65
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.55 E-value=0.0005 Score=69.11 Aligned_cols=156 Identities=18% Similarity=0.262 Sum_probs=98.7
Q ss_pred CCCCcceeccCCCCCccCCccEEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecC-CCCCCCCCccCCCeEe
Q 010183 43 QPYRTGYHFQPPKNWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWS 120 (516)
Q Consensus 43 ~~~Rp~~H~~p~~gW~NDPnG~~~~~-G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~-~aL~P~~~~D~~gv~S 120 (516)
.+|+..-.+..+..+.-||. ++.++ |+++|+|-..... .....-+....+.|..++...+ ..+.+.......++..
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~E 181 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPGGGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVE 181 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSEEEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccceeEEeecccCccccccCcccccccccccccCCcccc
Confidence 46666655554477788994 66665 9999999876544 2234457777789999888766 3344443223456788
Q ss_pred eeEEEcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010183 121 GSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (516)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m 200 (516)
|..++..+|.++|+|.+..........+|.|++.. ..|+....+|++.... .......-.-.. ++..++|+|+|
T Consensus 182 gp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~-~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 182 GPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRD-GENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTB-TTSSCEEEEEEE-EEEETTSEEEE
T ss_pred ceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeec-cCCccccCccCC-EEECCCCCEEE
Confidence 88888889999999997554333556788888753 4566665677774310 110111112233 34556888998
Q ss_pred EEeeee
Q 010183 201 IIGSKI 206 (516)
Q Consensus 201 ~~ga~~ 206 (516)
++=+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 875544
No 66
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.52 E-value=0.0038 Score=63.15 Aligned_cols=150 Identities=10% Similarity=0.173 Sum_probs=84.5
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-C-----ceecCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-N-----WIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-h-----W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 131 (516)
+.-| -+++++|+|||||.....+. ....+|.|+|++.. - |+...+.+.+... .......+++++++||++
T Consensus 57 ~WAP-~v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~ 132 (279)
T cd08988 57 LWAP-DIYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQP 132 (279)
T ss_pred Eecc-eEEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCE
Confidence 5567 47889999999998775432 23578999999864 2 5543343333322 123456788888888999
Q ss_pred EEEEcccCCCCceeEEEEEecCCCCCccceEEecC-CCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeee----
Q 010183 132 AIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI---- 206 (516)
Q Consensus 132 ~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~-~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~---- 206 (516)
+|+|.... .. .+.+-.+.|... ..... ...++..+ . +.....-|+ +++ .+|+|||+.++..
T Consensus 133 Yl~~g~~~-~g--i~~~eL~~d~~~-----~~~~~~~~~i~~~~--~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~ 198 (279)
T cd08988 133 WLSFGSFW-GG--IKLFELDKDTMK-----PAEPGELHSIAGRE--R--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRG 198 (279)
T ss_pred EEEecccC-CC--EEEEEECcccCC-----ccCCCcceEEeccC--C--CCCceEeeE-EEE-cCCeEEEEEEcCcccCC
Confidence 99996432 11 222233333211 10000 01122211 0 112345787 455 5799999876532
Q ss_pred -CCccEEEEEEcCCCC-CcEE
Q 010183 207 -NRKGLAILYRSKDFV-HWIK 225 (516)
Q Consensus 207 -~~~G~i~ly~S~Dl~-~W~~ 225 (516)
...-++.+++|+++. -|+.
T Consensus 199 ~~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 199 GDSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCCeEEEEEEeCCCCCCCCC
Confidence 112257889998874 4543
No 67
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.49 E-value=0.0074 Score=62.17 Aligned_cols=149 Identities=11% Similarity=0.108 Sum_probs=84.4
Q ss_pred cCCccEEEEC----CEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-Cceec-CC-CCCCCC-Ccc-CCCeEeeeEEEcCCC
Q 010183 59 NDPNGVMIYK----GIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPH-DP-AIYPSQ-QSD-INGCWSGSATILPGE 129 (516)
Q Consensus 59 NDPnG~~~~~----G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~~-~~-aL~P~~-~~D-~~gv~SGsav~~~dg 129 (516)
.-| -+++++ |+|+|||... ....|.|+|++.. .|+++ +. .+.+.. ..+ ...+..+++++++||
T Consensus 79 WAP-~v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG 150 (311)
T cd09003 79 WAP-SIAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDG 150 (311)
T ss_pred CCC-ceEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCC
Confidence 346 467888 9999999632 2358999999965 89975 32 222211 111 122457888888899
Q ss_pred ceEEEEcccCC----CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010183 130 KPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (516)
Q Consensus 130 ~~~l~YTg~~~----~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~ 205 (516)
+.+|+|.+... ...+...+|.-++ | +.+ ..+.++.-.. + ..+--|.+ ++ .+|.|||++++.
T Consensus 151 ~~Yl~~g~~~~~~~~~~~~~i~i~~l~~--D--~~~---~~g~~~~i~~--~----~~~Egp~~-~K-~~G~YYL~ys~~ 215 (311)
T cd09003 151 QGYLYFGGGVPGGRWANPNTARVIKLGD--D--MIS---VDGSAVTIDA--P----YFFEASGL-HK-INGTYYYSYCTN 215 (311)
T ss_pred CEEEEECCccCCCccccCCCEEEEEeCC--C--cee---ccCCceEccC--C----CceEeeeE-EE-ECCEEEEEEeCC
Confidence 99999975321 1122334443332 1 122 2222322111 1 23567874 45 589999988754
Q ss_pred e-------CCccEEEEEEcCCCC-CcEEeeecc
Q 010183 206 I-------NRKGLAILYRSKDFV-HWIKAKHPL 230 (516)
Q Consensus 206 ~-------~~~G~i~ly~S~Dl~-~W~~~~~~l 230 (516)
- ....++.+++|++.. -|+..+.+|
T Consensus 216 ~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 216 FGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 1 223466777887754 687644333
No 68
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.41 E-value=0.0038 Score=62.83 Aligned_cols=134 Identities=12% Similarity=0.054 Sum_probs=79.4
Q ss_pred ccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-CceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEc
Q 010183 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv-hW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (516)
+.-| -+++.+|+|||||-.+. ...+.|+|++.. .|++.+... ....+++.+++||+.+|+|.
T Consensus 76 ~WAP-~v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 76 QWAP-SLRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred EECC-ceEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 4567 47889999999998761 135678887754 687654321 23457777788999999986
Q ss_pred ccCCCCceeEEEE-EecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEE
Q 010183 137 GIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (516)
Q Consensus 137 g~~~~~~q~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly 215 (516)
+. .+.++ .+.|. ..... +...++..+ .. .....--|++ ++ .+|+|||++.+.......+.++
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~--~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~ 201 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVGG-KDQVIIDAG--EE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCL 201 (269)
T ss_pred CC------cEEEEEECccc-----CCcCC-CceEEEeCC--Cc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEE
Confidence 53 23333 33332 22211 111233332 10 1123467875 45 5899999987643223356788
Q ss_pred EcCCCC-CcEE
Q 010183 216 RSKDFV-HWIK 225 (516)
Q Consensus 216 ~S~Dl~-~W~~ 225 (516)
+|+++. -|+.
T Consensus 202 ~s~~~~GP~~~ 212 (269)
T cd09001 202 RSKSLTGPYES 212 (269)
T ss_pred EeCCCCCCcCC
Confidence 998865 4553
No 69
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.38 E-value=0.0038 Score=63.29 Aligned_cols=146 Identities=14% Similarity=0.139 Sum_probs=81.9
Q ss_pred CCCCCccCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCC-CCCCCCccCC--CeEeeeEEEcCCC
Q 010183 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPA-IYPSQQSDIN--GCWSGSATILPGE 129 (516)
Q Consensus 53 p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~a-L~P~~~~D~~--gv~SGsav~~~dg 129 (516)
+...+..||+ ++.++|+++|||-..-.....+..-|. +..+|...+...+.. ..|...|+.. ++.-|+.++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~-~~l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYI-AKMSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEE-EECCCCCccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 3456778994 666789999998643221111122333 333343345432322 3455555543 4667888888899
Q ss_pred ceEEEEcccCC-CCceeEEEEEecCCCCCcc-ceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCe-EEEEEee
Q 010183 130 KPAIFYTGIDP-HNRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR-WRVIIGS 204 (516)
Q Consensus 130 ~~~l~YTg~~~-~~~q~q~lA~s~D~~d~~l-~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~-w~m~~ga 204 (516)
.++|+|.+... ......++|+++...+++. ..|+|. .+||+.......+. .--...+ ...++|+ |+|++=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~--g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVY--GPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccC--cCCccce-EECCCCCEEEEEEcc
Confidence 99999987653 3344567788765433211 258886 47988644101111 1123343 4446776 8888644
No 70
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.30 E-value=0.0073 Score=62.74 Aligned_cols=165 Identities=16% Similarity=0.255 Sum_probs=98.6
Q ss_pred CCCCcceeccCC---CCCccCCccEEEEC-CEEEEEeeeCCCCC-------CCCCcEEEEEEeCCC-CCceecCCCCCCC
Q 010183 43 QPYRTGYHFQPP---KNWINDPNGVMIYK-GIYHLFYQYNPKGA-------VWGNIVWAHSTSKDL-INWIPHDPAIYPS 110 (516)
Q Consensus 43 ~~~Rp~~H~~p~---~gW~NDPnG~~~~~-G~YHLFYQ~~P~~~-------~wg~~~WgHa~S~Dl-vhW~~~~~aL~P~ 110 (516)
..|.+.--+... ...+.||. ++... |+.+|||...+... .+...+..+..|+|. .+|.. |..|.+.
T Consensus 58 ~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~ 135 (351)
T cd00260 58 KTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPS 135 (351)
T ss_pred CcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCcc
Confidence 456554333332 24567894 56666 99999999887642 234567778888886 89985 3334443
Q ss_pred CC-ccCCCeE--eeeEEEcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCC
Q 010183 111 QQ-SDINGCW--SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDP 187 (516)
Q Consensus 111 ~~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP 187 (516)
.. .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.| ++|+... + +.. ......|
T Consensus 136 ~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~-~~~-------~~~~~e~ 201 (351)
T cd00260 136 VKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--G-VND-------AGGCSEC 201 (351)
T ss_pred ccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--C-CCC-------CCCCcCC
Confidence 21 0111222 234455678988775544333344566778898875 8997632 1 111 0123467
Q ss_pred EEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCC-CCcEEe
Q 010183 188 TTAWLGPDKRWRVIIGSKINRKGLAILYRSKDF-VHWIKA 226 (516)
Q Consensus 188 ~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 226 (516)
.++-. .+|..+|+..... .+...+|.|.|. ..|+..
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 76543 5788888766532 466778888775 899853
No 71
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.22 E-value=0.027 Score=55.17 Aligned_cols=185 Identities=16% Similarity=0.258 Sum_probs=100.6
Q ss_pred ccCCCCCc--cCCccEEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCCCCCCCccCCCeEeeeEE-EcC
Q 010183 51 FQPPKNWI--NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT-ILP 127 (516)
Q Consensus 51 ~~p~~gW~--NDPnG~~~~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL~P~~~~D~~gv~SGsav-~~~ 127 (516)
..|+.||. .|| -++++||+||+|....-.+..||-|. =.-+-+|.+..-| +-..-+. +.-...+. ..+
T Consensus 16 ~~Pk~g~~slKD~-T~V~ynGk~~VyAtt~d~~~~y~sm~-----f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFaP 86 (271)
T PF03664_consen 16 AQPKSGWVSLKDF-TIVPYNGKHHVYATTADTGGGYGSMN-----FGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFAP 86 (271)
T ss_pred ccCCCCceeccCc-eEEeECCEEEEEEEeccCCCccceEe-----eeccCCHHHhhcc--ccccCCc-ccccceEEEecC
Confidence 35777886 699 68899999999999875555544433 3345678776543 1111111 11111111 134
Q ss_pred CCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeC
Q 010183 128 GEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (516)
Q Consensus 128 dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~ 207 (516)
.+.++|.|--... .-...++.|.++| ..|... .|++.... .+ .....-|..||-+ +..-||+....
T Consensus 87 k~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~i-~~-~~~g~iD~~vI~D--~~n~yLFfa~D-- 152 (271)
T PF03664_consen 87 KNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGSI-SG-SGTGPIDQWVICD--DTNMYLFFAGD-- 152 (271)
T ss_pred CcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--cccccccc-cC-CCCCceeeEEEec--CCceEEEEcCC--
Confidence 6677888753221 1123456676666 468764 46653220 11 2234679887743 44456655432
Q ss_pred CccEEEEEEcCC-CCCc----EEeeeccccCCCCCceecCceEEecCCCCCCccccCCCCCceEEEEEeeCC
Q 010183 208 RKGLAILYRSKD-FVHW----IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 208 ~~G~i~ly~S~D-l~~W----~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~~~ 274 (516)
.|. ||||.- +-+. .-....+.+......+|.++++++. |. .++.|++-..+
T Consensus 153 -nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G~-----------~~YLmiVEaiG 208 (271)
T PF03664_consen 153 -NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--GQ-----------NQYLMIVEAIG 208 (271)
T ss_pred -CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--CC-----------ceEEEEEEEec
Confidence 354 788843 2222 1001122222345589999999997 52 37888776544
No 72
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.17 E-value=0.0027 Score=63.38 Aligned_cols=147 Identities=19% Similarity=0.291 Sum_probs=88.4
Q ss_pred ccCCccEEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCC-CCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE-
Q 010183 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF- 134 (516)
Q Consensus 58 ~NDPnG~~~-~~G~YHLFYQ~~P~~~~wg~~~WgHa~S~D-lvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~- 134 (516)
..||. +++ .+|+.||||........|......+.+|+| +.+|+... .|.+.......+...+.++...+|.+++.
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~ 125 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAPY 125 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEEE
Confidence 45784 444 499999999766655555555555599999 89999854 23222212223444555556678887664
Q ss_pred EcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEE
Q 010183 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (516)
Q Consensus 135 YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~l 214 (516)
|... .......+.+|.|++ ++|+... ++... ...--|.++.. .+|..+|++... ..+.+.+
T Consensus 126 ~~~~--~~~~~~~~~~S~D~G----~tW~~~~--~~~~~--------~~~~e~~~~~~-~dG~l~~~~R~~--~~~~~~~ 186 (275)
T PF13088_consen 126 YHES--GGSFSAFVYYSDDGG----KTWSSGS--PIPDG--------QGECEPSIVEL-PDGRLLAVFRTE--GNDDIYI 186 (275)
T ss_dssp EEES--SCEEEEEEEEESSTT----SSEEEEE--ECECS--------EEEEEEEEEEE-TTSEEEEEEEEC--SSTEEEE
T ss_pred eecc--ccCcceEEEEeCCCC----ceeeccc--ccccc--------CCcceeEEEEC-CCCcEEEEEEcc--CCCcEEE
Confidence 4431 234566778899876 8998753 22110 01224443333 678888877653 2236778
Q ss_pred EEcCC-CCCcEE
Q 010183 215 YRSKD-FVHWIK 225 (516)
Q Consensus 215 y~S~D-l~~W~~ 225 (516)
++|.| ...|+.
T Consensus 187 ~~S~D~G~TWs~ 198 (275)
T PF13088_consen 187 SRSTDGGRTWSP 198 (275)
T ss_dssp EEESSTTSS-EE
T ss_pred EEECCCCCcCCC
Confidence 88877 789986
No 73
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.15 E-value=0.0025 Score=64.68 Aligned_cols=74 Identities=20% Similarity=0.250 Sum_probs=48.5
Q ss_pred CCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeeeccccCC--------CCCceecCceEEecCCCCCC
Q 010183 183 SFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK--------GTGMWECPDFFPVSTYGLNG 254 (516)
Q Consensus 183 ~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------~~~~wECPdlf~l~~~g~~g 254 (516)
.++||.|+.. +++|||+.++..... .+.+++|+||.+|+..+..+.... .....--|+++..+ |
T Consensus 7 ~~~DP~i~~~--~~~yy~~~t~~~~~~-~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~~--g--- 78 (288)
T cd09000 7 FYPDPSICRV--GDDYYLVTSSFEYFP-GVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRYHD--G--- 78 (288)
T ss_pred CCCCCCEEEE--CCEEEEEECCcccCC-CceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEEEC--C---
Confidence 3789997643 688998754321122 378999999999998765442211 11223349998875 5
Q ss_pred ccccCCCCCceEEEEEeeCC
Q 010183 255 LDTSDMGPNTKHVLKVSLDD 274 (516)
Q Consensus 255 ~~~s~~~~~~k~vl~~S~~~ 274 (516)
||+|.++...
T Consensus 79 ----------~yy~yy~~~~ 88 (288)
T cd09000 79 ----------TFYLITTNVD 88 (288)
T ss_pred ----------EEEEEEEecC
Confidence 8888887643
No 74
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.64 E-value=0.027 Score=57.63 Aligned_cols=136 Identities=13% Similarity=0.075 Sum_probs=73.0
Q ss_pred CCCCccCCccEEEE-CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceecCCCC----CCCCCcc----------CCCe
Q 010183 54 PKNWINDPNGVMIY-KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI----YPSQQSD----------INGC 118 (516)
Q Consensus 54 ~~gW~NDPnG~~~~-~G~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~~~aL----~P~~~~D----------~~gv 118 (516)
...+.-||+ ++.+ ||+.+|+|-..- ++. -++---+.|+..=.-.+..| .|+..|+ ..++
T Consensus 87 ~~~~~IDp~-vf~DdDGk~Yl~~g~~~----~~~-i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~ 160 (295)
T cd08982 87 FPPGLADPA-LFIDDDGRLYLYYGCSN----NYP-LRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPW 160 (295)
T ss_pred cCCCccCCc-eEECCCCCEEEEEecCC----CCC-eEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCcc
Confidence 345677995 5554 599999984211 111 23333344443111111111 1222222 1235
Q ss_pred EeeeEEEcCCCceEEEEcccCCC-CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCe
Q 010183 119 WSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (516)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~-~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~ 197 (516)
.-|..+...+|+++|+|++.... ..-.+.+|+|++.- -.|++...|||+..+ .+ ....--...+ ....+|.
T Consensus 161 ~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~--~~-~~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 161 MEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKP--GG-FITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCC--CC-eEecCCcccE-EECCCCC
Confidence 66888778899999999864322 22356788887653 457776678988544 21 0011122333 3446788
Q ss_pred EEEEEe
Q 010183 198 WRVIIG 203 (516)
Q Consensus 198 w~m~~g 203 (516)
||++.=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 888753
No 75
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.25 E-value=0.069 Score=54.87 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=75.3
Q ss_pred EEcCCCceEEEEcccCC---CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010183 124 TILPGEKPAIFYTGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (516)
Q Consensus 124 v~~~dg~~~l~YTg~~~---~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m 200 (516)
++..+|+++|||--+.. .+...-+.|+|+| |+||+..+ ++|.+. ..++....--..++.. ++.++|
T Consensus 15 ~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~~--~aL~P~--~~~d~~g~~SGs~~~~--~~~~~~ 83 (308)
T PF00251_consen 15 LVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKD-----LVHWEHLP--VALPPD--EEYDADGCFSGSAVVD--DDNLVL 83 (308)
T ss_dssp EEEETTEEEEEEEEETTSSSS-SBEEEEEEESS-----SSSEEEEE--EEE-SS--SGGGTTEEEEEEEEEE--TTCEEE
T ss_pred CeEeCCEEEEEeccCCCCcccceeEEEEEECCC-----CCCceeCC--ceEccc--ccCCcCccCcceEEEE--CCEEEE
Confidence 34579999999965432 1346678999998 69999863 666554 2222222223333433 347888
Q ss_pred EEeeeeCC-ccEEEEEEc-CCCCCcEEee--eccccC---CCCCceecCceEEecCCCCCCccccCCCCCceEEEEEee
Q 010183 201 IIGSKINR-KGLAILYRS-KDFVHWIKAK--HPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (516)
Q Consensus 201 ~~ga~~~~-~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~k~vl~~S~ 272 (516)
++.+...+ .....++.| +|..+|+... +|+... .....|-=|-+|.... + +|+|+++.
T Consensus 84 ~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~-~-------------~~~m~~g~ 148 (308)
T PF00251_consen 84 FYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRED-G-------------RWYMLLGA 148 (308)
T ss_dssp EEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECT-T-------------EEEEEEEE
T ss_pred EEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecC-C-------------EEEEEEec
Confidence 88776532 445567777 8899999854 455442 1234567777765441 3 78877654
No 76
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.17 E-value=0.16 Score=51.57 Aligned_cols=144 Identities=13% Similarity=0.207 Sum_probs=79.1
Q ss_pred ccCCccEEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC---CceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010183 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI---NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (516)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~P~~~~wg~~~WgHa~S~Dlv---hW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 132 (516)
..-| -++|+ +++|+|+||+.+ ...+||+|.. .|....+.+.........+.-.-.+ +.+|++.+
T Consensus 78 fwAP-qVfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~Y 146 (303)
T cd08987 78 RVAP-QVFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCY 146 (303)
T ss_pred cccC-EEeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEE
Confidence 3467 36655 599999999732 5689999975 5877655444332222234444554 57789999
Q ss_pred EEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCC--eEEEEEeeeeCCcc
Q 010183 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK--RWRVIIGSKINRKG 210 (516)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g--~w~m~~ga~~~~~G 210 (516)
||+.+-+. .+..|-... .+|-..-.+++.... +.....-|.-|.| ++ .+| +|+|+|-|...+.+
T Consensus 147 Lff~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~--~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~ 212 (303)
T cd08987 147 LFFSDDNG----KLYRSSTTL------GNFPNGGTETVIIMS--DSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGG 212 (303)
T ss_pred EEEecCCC----eEEEEecch------hhCCCCCCccEEEec--CCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCC
Confidence 99987542 333332221 112211112222111 0111234677875 44 344 99999987543222
Q ss_pred E-EEEEEcCCCC-CcEEe
Q 010183 211 L-AILYRSKDFV-HWIKA 226 (516)
Q Consensus 211 ~-i~ly~S~Dl~-~W~~~ 226 (516)
. ..-++|+.|- .|+..
T Consensus 213 rYfrs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 213 RYFRSWTATSLDGPWTPL 230 (303)
T ss_pred CeEEEEEcCCCCCCceec
Confidence 1 1226677764 88865
No 77
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.02 E-value=0.08 Score=52.75 Aligned_cols=161 Identities=16% Similarity=0.096 Sum_probs=85.4
Q ss_pred CEEEEEeeeCCCCCCCCCcEEEEEEe--CCC-CCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCC---C
Q 010183 69 GIYHLFYQYNPKGAVWGNIVWAHSTS--KDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH---N 142 (516)
Q Consensus 69 G~YHLFYQ~~P~~~~wg~~~WgHa~S--~Dl-vhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~ 142 (516)
|+...|+.. +...+.....-..| +|. .+|.....+..+. . ....+..++++.+.+|+++|||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~-~-~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP-K-PGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST-B-TTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc-c-cCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 33344555555556 987 8899854433333 1 1245667777667899999999543321 1
Q ss_pred ceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEc-CCCC
Q 010183 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS-KDFV 221 (516)
Q Consensus 143 ~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S-~Dl~ 221 (516)
.......+|.|+| ++|.+.. .|...+ ........+.+- +-. .+|.+++..-........+.++.| +..+
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~--~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~ 145 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGW--FGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGK 145 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHC--CCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTS
T ss_pred ceeEEEEEECCCC----CCCCCcc--cccccc--ccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCc
Confidence 1222238899875 8999863 333221 111112233432 333 478887763222223344555555 4578
Q ss_pred CcEEeeeccccCCCCCceecCceEEec
Q 010183 222 HWIKAKHPLHSVKGTGMWECPDFFPVS 248 (516)
Q Consensus 222 ~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (516)
.|+... ++. .....--|.++++.
T Consensus 146 tW~~~~-~~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 146 TWSSGS-PIP---DGQGECEPSIVELP 168 (275)
T ss_dssp SEEEEE-ECE---CSEEEEEEEEEEET
T ss_pred eeeccc-ccc---ccCCcceeEEEECC
Confidence 998654 332 11122236666665
No 78
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.57 E-value=6.5 Score=40.67 Aligned_cols=149 Identities=13% Similarity=0.112 Sum_probs=82.8
Q ss_pred CcEEEEEEeCC-CCCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCC----------CceeEEEEEecCC
Q 010183 86 NIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH----------NRQVQNLAVPKNL 154 (516)
Q Consensus 86 ~~~WgHa~S~D-lvhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~q~q~lA~s~D~ 154 (516)
.+....++|+| +.+|... .++..... ....++.++.+.+.+|+++|||...... ......+..|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 56788888988 4899985 34444322 2355778888765448999999765431 2345678889887
Q ss_pred CCCccceEEecCCCCcccCCCCCcCCCCCCCCCE-EEEeCCCCeEEEEEeeeeCC--ccEEEEEEcCCCCCcEEeeeccc
Q 010183 155 SDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT-TAWLGPDKRWRVIIGSKINR--KGLAILYRSKDFVHWIKAKHPLH 231 (516)
Q Consensus 155 ~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~-v~w~~~~g~w~m~~ga~~~~--~G~i~ly~S~Dl~~W~~~~~~l~ 231 (516)
+ .+|.+. ..+........+ ..-++-|- .+-. ++|+++|.+-..... .-...+|..++.+.|+. +....
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~-~~~~~ 193 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKL-GEGVN 193 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEE-CCCCC
Confidence 5 799863 123321100011 11123331 1223 478887766443322 22334454456799985 33221
Q ss_pred cCCCCCceecCceEEec
Q 010183 232 SVKGTGMWECPDFFPVS 248 (516)
Q Consensus 232 ~~~~~~~wECPdlf~l~ 248 (516)
. .....| |.++++.
T Consensus 194 ~--~~~~~e-~~i~el~ 207 (351)
T cd00260 194 D--AGGCSE-CSVVELS 207 (351)
T ss_pred C--CCCCcC-CEEEEec
Confidence 1 123345 7788885
No 79
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=93.15 E-value=1.1 Score=46.34 Aligned_cols=146 Identities=17% Similarity=0.270 Sum_probs=70.3
Q ss_pred CCccEEEECCEEEEEe-eeCCCCCCCCCcEE--EEEEeCC-CCCceecCCCCCCC-CCccCCCeE--eeeEEEcCCCceE
Q 010183 60 DPNGVMIYKGIYHLFY-QYNPKGAVWGNIVW--AHSTSKD-LINWIPHDPAIYPS-QQSDINGCW--SGSATILPGEKPA 132 (516)
Q Consensus 60 DPnG~~~~~G~YHLFY-Q~~P~~~~wg~~~W--gHa~S~D-lvhW~~~~~aL~P~-~~~D~~gv~--SGsav~~~dg~~~ 132 (516)
.|- .+..++..+|+- .|+... +...| -++.|+| .+.|.+....+... +... ... -||.|+.+||+++
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~---~~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLV 135 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSA---GADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLV 135 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS-----SSTTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EE
T ss_pred eee-eeecceeEEEEEEEEeccc---cccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEE
Confidence 564 334566666665 455321 21233 3556665 46899743211111 1111 111 1555667899877
Q ss_pred EEEcccCCCCc-eeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccE
Q 010183 133 IFYTGIDPHNR-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGL 211 (516)
Q Consensus 133 l~YTg~~~~~~-q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~ 211 (516)
+=-.+...+.. ..-.|.+|+|.+ .+|+-..+ ......+||.|+.. ++|+-.|+.... .|.
T Consensus 136 FPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg-----------~s~~gC~~psv~EW-e~gkLlM~~~c~---~g~ 196 (310)
T PF13859_consen 136 FPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG-----------MSPAGCSDPSVVEW-EDGKLLMMTACD---DGR 196 (310)
T ss_dssp EEEEEEETT---EEEEEEEESSTT----SS-EE-S---------------TT-EEEEEEEE--TTEEEEEEE-T---TS-
T ss_pred EEEeeeccCccceEEEEEEECCCc----cceEeccc-----------cCCCCcceEEEEec-cCCeeEEEEecc---cce
Confidence 65566554444 366788998865 78986422 12234689998755 578888876542 355
Q ss_pred EEEEEcCCC-CCcEEeeecc
Q 010183 212 AILYRSKDF-VHWIKAKHPL 230 (516)
Q Consensus 212 i~ly~S~Dl-~~W~~~~~~l 230 (516)
-.+|+|.|+ ..|+..-..|
T Consensus 197 rrVYeS~DmG~tWtea~gtl 216 (310)
T PF13859_consen 197 RRVYESGDMGTTWTEALGTL 216 (310)
T ss_dssp --EEEESSTTSS-EE-TTTT
T ss_pred EEEEEEcccceehhhccCcc
Confidence 568999886 6899643333
No 80
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=90.68 E-value=21 Score=36.98 Aligned_cols=153 Identities=15% Similarity=0.151 Sum_probs=86.0
Q ss_pred cCCccEEEECCEEEEEeeeCCC-C---CCCCCcEEEEEEeCC-CCCceecCCCCCCCCCccCCCe------EeeeEEEcC
Q 010183 59 NDPNGVMIYKGIYHLFYQYNPK-G---AVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGC------WSGSATILP 127 (516)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~-~---~~wg~~~WgHa~S~D-lvhW~~~~~aL~P~~~~D~~gv------~SGsav~~~ 127 (516)
-=|.+.|-.+|+-+|.|+..-. + ..|....=+.+.|+| ..+|+..+..+.+..+.- .|+ |.-++....
T Consensus 95 ~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~ 173 (316)
T PF13810_consen 95 VIPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKD 173 (316)
T ss_pred EcccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCC
Confidence 3488889999999999987632 1 124434557899999 689999986666654211 111 222333334
Q ss_pred CCceEEEEcccCCCCceeEEEEEec-C-CCCCc------cce--EEecCC--CCcccCCCCCcCCCCCCCCCEEEEeCCC
Q 010183 128 GEKPAIFYTGIDPHNRQVQNLAVPK-N-LSDPY------LRE--WVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (516)
Q Consensus 128 dg~~~l~YTg~~~~~~q~q~lA~s~-D-~~d~~------l~~--w~k~~~--nPvi~~~~~~~~~~~~fRDP~v~w~~~~ 195 (516)
||-.|+|=|...+. ....||.-. + -.|+. ... |.+... .||+..+ +--..|.|.+..
T Consensus 174 dgyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~---------vgElSv~~~~~~ 242 (316)
T PF13810_consen 174 DGYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP---------VGELSVRYNEYL 242 (316)
T ss_pred CCEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC---------ccceEEEEeCCC
Confidence 55455554543332 223344322 1 11100 012 544211 3555332 223356777678
Q ss_pred CeEEEEEeeeeCCccEEEEEEcCCCC-CcEE
Q 010183 196 KRWRVIIGSKINRKGLAILYRSKDFV-HWIK 225 (516)
Q Consensus 196 g~w~m~~ga~~~~~G~i~ly~S~Dl~-~W~~ 225 (516)
|+|+|+.... ..+.|.+.++++.. .|..
T Consensus 243 gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~ 271 (316)
T PF13810_consen 243 GKWVLSYFDA--GTGGIVLRTAPSPTGPWSE 271 (316)
T ss_pred CEEEEEEecc--cCCcEEEEecCCCCCCCCC
Confidence 9999987643 33568888998887 6874
No 81
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=89.31 E-value=1.8 Score=47.48 Aligned_cols=54 Identities=22% Similarity=0.319 Sum_probs=38.9
Q ss_pred CCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEEEcCCCCCcEEeeecccc
Q 010183 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHS 232 (516)
Q Consensus 167 ~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~ 232 (516)
.|||+... .=||.++. ...-|||..+.-.--.| +.+++|.||+||+.++.||..
T Consensus 22 ~NPvl~gf---------~PDpSi~r--vg~dyYia~stF~~fpG-l~i~hS~DL~nW~~v~tpl~~ 75 (549)
T COG3507 22 LNPVLAGF---------NPDPSIVR--VGDDYYIATSTFEWFPG-LAIHHSRDLVNWTLVSTPLIR 75 (549)
T ss_pred cCcccccc---------CCCCceEe--cCCceEEEcceEEEcCc-eeeeccccccCcEEecccccC
Confidence 48888432 14999664 45569998774332244 889999999999999887754
No 82
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=84.65 E-value=5.7 Score=38.55 Aligned_cols=106 Identities=23% Similarity=0.360 Sum_probs=65.2
Q ss_pred EEEECC-EEEEEeeeCCCCCCCCCcEEEEEEeCCCCCceec--CCCC-CCCCCccCCCeEe--eeEEEcCCCceEEEEcc
Q 010183 64 VMIYKG-IYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH--DPAI-YPSQQSDINGCWS--GSATILPGEKPAIFYTG 137 (516)
Q Consensus 64 ~~~~~G-~YHLFYQ~~P~~~~wg~~~WgHa~S~DlvhW~~~--~~aL-~P~~~~D~~gv~S--Gsav~~~dg~~~l~YTg 137 (516)
.++++| .|+++-|-.|.-. |+..+-.|.-.+ -|+-. |+-| .|.-+|+..|-|- |.||+.++|+..+-|.+
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 345666 5778888777643 444455554433 47754 3444 3555788788774 88888899999999987
Q ss_pred cCCCCceeEEEEEecCCCCC-ccceEEecCCCCcccCC
Q 010183 138 IDPHNRQVQNLAVPKNLSDP-YLREWVKSPKNPLMAPD 174 (516)
Q Consensus 138 ~~~~~~q~q~lA~s~D~~d~-~l~~w~k~~~nPvi~~~ 174 (516)
...+..-..++-+....+|. +-.+|+|.+ .||+...
T Consensus 213 satd~nycmgllwanen~dlldpaswtksp-tpvf~ts 249 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDPASWTKSP-TPVFKTS 249 (324)
T ss_pred cccccceeeeeeeecccCCcCCchhcccCC-Ccceeee
Confidence 65433334445444332221 015899974 7999543
No 83
>PTZ00334 trans-sialidase; Provisional
Probab=84.13 E-value=18 Score=41.92 Aligned_cols=150 Identities=18% Similarity=0.251 Sum_probs=83.5
Q ss_pred ccCCccEEEECCEEEEEeee--CCC--------CCCCC-CcEEEEEEeC-----CCCCceecCCCCCCC----CC--ccC
Q 010183 58 INDPNGVMIYKGIYHLFYQY--NPK--------GAVWG-NIVWAHSTSK-----DLINWIPHDPAIYPS----QQ--SDI 115 (516)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~--~P~--------~~~wg-~~~WgHa~S~-----DlvhW~~~~~aL~P~----~~--~D~ 115 (516)
.-.|--++.-+..|-|-=-| ... ...|+ ....|+++-. .-|+|.+. ..|... .. +..
T Consensus 179 v~rPTTvvKGn~VfmLvG~y~~~~~~~~~~~~~~~~~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~ 257 (780)
T PTZ00334 179 VSRPTTVVNGSDIYMFAGTYSFEVTDKAGNTAAAAKWGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTR 257 (780)
T ss_pred ccCCeEEeeCCEEEEEecccccccccccccccccCCCccEEEEEEeecCCCCCcceEECcCc-ccCCcccccccccccee
Confidence 56687666555555555122 111 12344 4677888632 24899873 233111 11 110
Q ss_pred --CCeEeeeEEEcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeC
Q 010183 116 --NGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193 (516)
Q Consensus 116 --~gv~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~ 193 (516)
.|. ||.|+.+||++++=-.+.+.++...-.|.+|+|.+ +|+=.. +......+||.|+-.
T Consensus 258 ~iggG--GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~-----------g~s~~gC~~P~I~EW- 318 (780)
T PTZ00334 258 LIGGG--GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSK-----------GMSADGCSDPSVVEW- 318 (780)
T ss_pred ecCCC--cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcC-----------CCCCCCCCCCEEEEE-
Confidence 122 55566789987654455444455556678888753 485321 222245799997755
Q ss_pred CCCeEEEEEeeeeCCccEEEEEEcCCC-CCcEEeeecc
Q 010183 194 PDKRWRVIIGSKINRKGLAILYRSKDF-VHWIKAKHPL 230 (516)
Q Consensus 194 ~~g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~~~~l 230 (516)
++|+-.|+.... .|+-.+|+|.|. ..|+..-..|
T Consensus 319 e~gkLlM~t~C~---dG~RrVYES~DmG~tWtEAlGTL 353 (780)
T PTZ00334 319 KEGKLMMMTACD---DGRRRVYESGDKGDSWTEALGTL 353 (780)
T ss_pred cCCeEEEEEEeC---CCCEEEEEECCCCCChhhCCCcc
Confidence 467877766553 244468999886 6898643333
No 84
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=81.11 E-value=19 Score=39.45 Aligned_cols=99 Identities=19% Similarity=0.174 Sum_probs=57.9
Q ss_pred EcCCCceEEEEcccCC---CCceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEE
Q 010183 125 ILPGEKPAIFYTGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI 201 (516)
Q Consensus 125 ~~~dg~~~l~YTg~~~---~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~ 201 (516)
+..+|+|++||-=+.. .+...=+.|+|+| |.+|+..+ +++.|. ..++.....--.+|-. .++.+.|+
T Consensus 48 iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~p--iaL~Pd--~~~d~~g~ySGSAV~~-~~~l~lfy 117 (486)
T COG1621 48 IYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHLP--IALAPD--DDYDSHGCYSGSAVVD-DGNLSLFY 117 (486)
T ss_pred eEECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceECC--ceecCC--CccccCCceeeeEEEe-CCcEEEEE
Confidence 3468899999975432 1333446789987 79999752 355444 2222333333333333 46778887
Q ss_pred EeeeeC---Ccc-EEEEEEcCCCCCcEEe-eeccccC
Q 010183 202 IGSKIN---RKG-LAILYRSKDFVHWIKA-KHPLHSV 233 (516)
Q Consensus 202 ~ga~~~---~~G-~i~ly~S~Dl~~W~~~-~~~l~~~ 233 (516)
-|...+ .+. .=.++.|+|..+++.. ++++...
T Consensus 118 tg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 118 TGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred ccceeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 776542 122 3357888888888763 5555443
No 85
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=72.96 E-value=46 Score=35.91 Aligned_cols=128 Identities=13% Similarity=0.154 Sum_probs=79.0
Q ss_pred CCEEEEEeeeCCCC-CCC-----CCcEEEEEEeCC----CCCceecCCCCCCCCCccC-------CCeEeeeEEEc-CCC
Q 010183 68 KGIYHLFYQYNPKG-AVW-----GNIVWAHSTSKD----LINWIPHDPAIYPSQQSDI-------NGCWSGSATIL-PGE 129 (516)
Q Consensus 68 ~G~YHLFYQ~~P~~-~~w-----g~~~WgHa~S~D----lvhW~~~~~aL~P~~~~D~-------~gv~SGsav~~-~dg 129 (516)
+|+..|||.....+ ..- -...-|++.+.| +-.|+.+.+.+.|++.+-. ..--.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999984331 111 124567787777 5567777777888864211 23345777766 589
Q ss_pred ceEEEEcccCCC--------C------------------------ceeEEEEEecCCCCCccceEEecCCCCcccCCCCC
Q 010183 130 KPAIFYTGIDPH--------N------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (516)
Q Consensus 130 ~~~l~YTg~~~~--------~------------------------~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~ 177 (516)
+-||+|.|+... . .-.++||...+.. +..|+-++ |+|...
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~~--PL~~a~--- 294 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELLP--PLLSAN--- 294 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEEE--EEEEET---
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEeC--cceecc---
Confidence 999999876431 0 1246788887643 35788774 888643
Q ss_pred cCCCCCCCCCEEEEeCCCCeEEEEEeeee
Q 010183 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (516)
Q Consensus 178 ~~~~~~fRDP~v~w~~~~g~w~m~~ga~~ 206 (516)
+ -.....=|.||.+ +|+||++..++.
T Consensus 295 ~-v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 295 G-VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp T-TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred c-ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1 1122345777765 899999998875
No 86
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=65.58 E-value=43 Score=36.75 Aligned_cols=92 Identities=23% Similarity=0.298 Sum_probs=53.2
Q ss_pred cCCCceEEEEcccCCC---CceeEEEEEecCCCCCccceEEecCCCCcccCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010183 126 LPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (516)
Q Consensus 126 ~~dg~~~l~YTg~~~~---~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~fRDP~v~w~~~~g~w~m~~ 202 (516)
..+|.++|||.-+..+ +...=+.|+|+| |++|+.++ |.|.|.+.... ...|----++ . .+|.=.|+.
T Consensus 67 ~ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~Ps~~~di-ng~wSGSati-~-~~~~~vily 136 (571)
T KOG0228|consen 67 YYKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAPSEWFDI-NGCWSGSATI-D-PNNSPVILY 136 (571)
T ss_pred ccCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCCCCcccc-CccccceEEE-c-cCCCeEEEe
Confidence 4689999999765432 335557899988 79999874 66655411111 1223333222 2 456666666
Q ss_pred eeeeCCccEEEEEEc-CC-----CCCcEEee
Q 010183 203 GSKINRKGLAILYRS-KD-----FVHWIKAK 227 (516)
Q Consensus 203 ga~~~~~G~i~ly~S-~D-----l~~W~~~~ 227 (516)
.+-..+..+|..|.- .| |+.|...+
T Consensus 137 tg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 137 TGIDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred cccCcCceEEEEEeccCCCCchhhheeecCC
Confidence 554444566777753 22 46776543
No 87
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=63.24 E-value=34 Score=35.49 Aligned_cols=95 Identities=17% Similarity=0.212 Sum_probs=53.5
Q ss_pred EcCCCceEEEEcccCC-CC------ceeEEEEEecCCCCCccceEEecCCCCcccC-CCCCcCCCCCCCCCEE--EEeCC
Q 010183 125 ILPGEKPAIFYTGIDP-HN------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAP-DAMNQINTSSFRDPTT--AWLGP 194 (516)
Q Consensus 125 ~~~dg~~~l~YTg~~~-~~------~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~-~~~~~~~~~~fRDP~v--~w~~~ 194 (516)
|..+|+.||.|..+.. .. .....||+|+|.+ .+|++.+. .+-.. +..++... .-.++. -+. .
T Consensus 101 I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~~-~~~~~~~~~~g~~~--~~~~fq~~a~~-~ 172 (316)
T PF13810_consen 101 ISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVPG-TIRPNSPFHPGFNQ--GNWNFQMAAFV-K 172 (316)
T ss_pred EEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCCC-cccccccccCCccc--ccccccccccc-C
Confidence 4568899999987643 11 2256799999875 79999742 22221 10011110 001221 122 2
Q ss_pred CCeEEEEEeeeeCCccEEEEEEc-----CCCCCcEEee
Q 010183 195 DKRWRVIIGSKINRKGLAILYRS-----KDFVHWIKAK 227 (516)
Q Consensus 195 ~g~w~m~~ga~~~~~G~i~ly~S-----~Dl~~W~~~~ 227 (516)
++.|+-++|......|.+.|+|- .|+..|++..
T Consensus 173 ~dgyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~ 210 (316)
T PF13810_consen 173 DDGYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWD 210 (316)
T ss_pred CCCEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccC
Confidence 44577777775555677888885 3556677653
No 88
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=34.59 E-value=4.6e+02 Score=25.80 Aligned_cols=161 Identities=16% Similarity=0.288 Sum_probs=87.7
Q ss_pred CCCCCccCCccEEEECCEEEEEeeeCCCCCC-CC----CcEEEEEEeCCCC--CceecCCCCCCCCCccCCCeEeeeE-E
Q 010183 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGAV-WG----NIVWAHSTSKDLI--NWIPHDPAIYPSQQSDINGCWSGSA-T 124 (516)
Q Consensus 53 p~~gW~NDPnG~~~~~G~YHLFYQ~~P~~~~-wg----~~~WgHa~S~Dlv--hW~~~~~aL~P~~~~D~~gv~SGsa-v 124 (516)
|-.+.+.-| -+-+.+|++++||-..|.... -| +|.-=-..+.|-+ +|.+.+....+= +. ||=-| +
T Consensus 65 pms~liwap-eih~ingkwyiyfaaa~ta~~k~g~f~hrmfvlene~anpltg~w~ekgqikt~w---es---fsldatt 137 (324)
T COG3940 65 PMSNLIWAP-EIHFINGKWYIYFAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEKGQIKTAW---ES---FSLDATT 137 (324)
T ss_pred chhhccccc-ceeEEcceEEEEEeecCcccccccccceeEEEEecCCCCCCcccceecceeccch---hc---ceeeeee
Confidence 344455567 355789999999998886432 12 2322223344433 687766554442 21 33222 3
Q ss_pred EcCCCceEEEEcccCC--CCceeEEEEEecCCCCCccceEEecCCCCcc-cCCCCCcCCCCCC---CCCEEEEeCCCCeE
Q 010183 125 ILPGEKPAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINTSSF---RDPTTAWLGPDKRW 198 (516)
Q Consensus 125 ~~~dg~~~l~YTg~~~--~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi-~~~~~~~~~~~~f---RDP~v~w~~~~g~w 198 (516)
..++|+.+.++...+. .+...+.||-..+ .|+-. +.||+ +.|+ -.++...| ..|.|+-+ +|+-
T Consensus 138 feh~gk~yyvwaqkdp~i~gnsniyiaemen-------pwtik-gepvmlskpe-~dwe~~gfwvnegpav~k~--ngki 206 (324)
T COG3940 138 FEHNGKLYYVWAQKDPNIKGNSNIYIAEMEN-------PWTIK-GEPVMLSKPE-LDWEIKGFWVNEGPAVLKK--NGKI 206 (324)
T ss_pred eeeCCEEEEEEeccCCCccCCcceEEEeccC-------Cceec-CceEEecCCC-cccEEEEEEecCCceEEEE--CCEE
Confidence 4578887777765443 2455667776654 48765 46877 3441 23444444 46876543 6666
Q ss_pred EEEEeee-eCCccEEE---EEEcCCCC---CcEEeeeccc
Q 010183 199 RVIIGSK-INRKGLAI---LYRSKDFV---HWIKAKHPLH 231 (516)
Q Consensus 199 ~m~~ga~-~~~~G~i~---ly~S~Dl~---~W~~~~~~l~ 231 (516)
.+.+++. .+..=|+. .-...||. +|+....|++
T Consensus 207 fi~ysasatd~nycmgllwanen~dlldpaswtksptpvf 246 (324)
T COG3940 207 FITYSASATDVNYCMGLLWANENSDLLDPASWTKSPTPVF 246 (324)
T ss_pred EEEEeccccccceeeeeeeecccCCcCCchhcccCCCcce
Confidence 6555543 33322333 33345554 7886555544
No 89
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=32.92 E-value=1.7e+02 Score=29.35 Aligned_cols=113 Identities=17% Similarity=0.246 Sum_probs=63.9
Q ss_pred CCceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCCCceeEEEEEecCCCCCccceEEecCCCCcccCCCCC
Q 010183 98 INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (516)
Q Consensus 98 vhW~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPvi~~~~~~ 177 (516)
..|+--++.+.|...| -++=..++| ..+|++++|.|..+.. .....+++.. +..|......+--
T Consensus 7 ~~WtStg~L~~Pk~g~--~slKD~T~V-~ynGk~~VyAtt~d~~-~~y~sm~f~~------Ftdws~~~sA~q~------ 70 (271)
T PF03664_consen 7 YRWTSTGPLAQPKSGW--VSLKDFTIV-PYNGKHHVYATTADTG-GGYGSMNFGP------FTDWSQMASASQN------ 70 (271)
T ss_pred ceeccCCccccCCCCc--eeccCceEE-eECCEEEEEEEeccCC-CccceEeeec------cCCHHHhhccccc------
Confidence 4688888888887643 233345554 4799999999987532 1233444442 2345543221111
Q ss_pred cCCCCCCCCCEEEEeCCCCeEEEEEeeeeCCccEEEEE-EcCCCC---CcEEeeecccc
Q 010183 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY-RSKDFV---HWIKAKHPLHS 232 (516)
Q Consensus 178 ~~~~~~fRDP~v~w~~~~g~w~m~~ga~~~~~G~i~ly-~S~Dl~---~W~~~~~~l~~ 232 (516)
+.....--|.|++..+.+.|||++=-+ +...-| +|.|.. .|... .+|++
T Consensus 71 -~m~~~~vAP~vFYFaPk~~W~L~yQwg----~~~fsY~Ts~DptnpngWSap-q~lf~ 123 (271)
T PF03664_consen 71 -YMDQSAVAPQVFYFAPKNIWYLAYQWG----PAAFSYSTSSDPTNPNGWSAP-QPLFS 123 (271)
T ss_pred -cCCcccccceEEEecCCcEEEEEEecC----CCcceeecCCCCCCCccCCCC-ccccc
Confidence 111224578888888889999987321 223345 466654 57643 34443
No 90
>PLN03207 stomagen; Provisional
Probab=24.16 E-value=48 Score=28.16 Aligned_cols=15 Identities=47% Similarity=0.881 Sum_probs=10.4
Q ss_pred HHHHHHHHHhhceee
Q 010183 8 LFLFFALFLGHGVVE 22 (516)
Q Consensus 8 ~~~~~~~~~~~~~~~ 22 (516)
+||||+|+|++.|+.
T Consensus 16 ffLl~~llla~~v~q 30 (113)
T PLN03207 16 FFLLFFLLLGAYVIQ 30 (113)
T ss_pred HHHHHHHHHHHHHHh
Confidence 466666778877764
Done!