Query 010187
Match_columns 516
No_of_seqs 285 out of 1254
Neff 5.9
Searched_HMMs 46136
Date Thu Mar 28 22:04:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010187.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010187hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02870 Probable galacturonos 100.0 8E-147 2E-151 1163.4 35.8 504 1-514 1-512 (533)
2 PLN02867 Probable galacturonos 100.0 1E-145 2E-150 1159.5 38.3 513 1-515 1-516 (535)
3 PLN02659 Probable galacturonos 100.0 4E-145 8E-150 1151.0 33.3 505 1-514 1-513 (534)
4 PLN02829 Probable galacturonos 100.0 2E-108 4E-113 880.8 28.4 407 87-514 205-619 (639)
5 PLN02910 polygalacturonate 4-a 100.0 4E-108 1E-112 876.2 28.6 404 94-514 233-637 (657)
6 PLN02742 Probable galacturonos 100.0 3E-105 6E-110 848.7 30.6 406 94-515 110-516 (534)
7 PLN02523 galacturonosyltransfe 100.0 6E-100 1E-104 808.5 30.8 383 117-514 157-539 (559)
8 PLN02769 Probable galacturonos 100.0 1E-99 2E-104 818.1 26.6 392 94-514 218-610 (629)
9 PLN02718 Probable galacturonos 100.0 3.4E-95 7E-100 780.1 26.1 383 93-514 200-583 (603)
10 cd06429 GT8_like_1 GT8_like_1 100.0 1.7E-54 3.8E-59 433.4 18.0 250 211-514 1-250 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 2E-41 4.3E-46 351.1 17.1 250 208-513 23-279 (334)
12 cd00505 Glyco_transf_8 Members 100.0 4.3E-40 9.4E-45 326.3 16.9 239 211-506 1-246 (246)
13 cd06431 GT8_LARGE_C LARGE cata 100.0 2.9E-39 6.3E-44 327.4 15.1 246 212-514 4-262 (280)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 5.3E-39 1.1E-43 317.9 16.2 239 211-506 1-248 (248)
15 COG1442 RfaJ Lipopolysaccharid 100.0 1.7E-37 3.8E-42 318.7 16.3 246 210-513 2-253 (325)
16 PF01501 Glyco_transf_8: Glyco 100.0 4E-36 8.8E-41 292.1 13.1 246 212-507 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 2E-32 4.3E-37 278.6 16.0 245 211-513 1-266 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 3.8E-32 8.2E-37 271.1 15.9 232 211-500 1-240 (248)
19 cd02537 GT8_Glycogenin Glycoge 99.9 1E-24 2.2E-29 216.3 14.7 145 326-511 73-219 (240)
20 PLN00176 galactinol synthase 99.9 7.2E-24 1.6E-28 218.9 16.0 164 329-510 99-272 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.8 2.9E-19 6.3E-24 180.8 7.4 145 325-510 75-244 (278)
22 KOG1879 UDP-glucose:glycoprote 99.0 5.1E-10 1.1E-14 128.7 9.5 217 207-475 1178-1401(1470)
23 COG5597 Alpha-N-acetylglucosam 97.9 3.5E-06 7.5E-11 85.7 1.5 158 330-510 155-342 (368)
24 PF03407 Nucleotid_trans: Nucl 96.5 0.0068 1.5E-07 58.7 6.7 144 328-500 49-202 (212)
25 PLN03182 xyloglucan 6-xylosylt 88.8 0.79 1.7E-05 49.3 5.9 159 324-508 179-366 (429)
26 PF05637 Glyco_transf_34: gala 82.4 0.83 1.8E-05 45.8 2.2 150 341-499 74-231 (239)
27 PLN02769 Probable galacturonos 81.9 9.6 0.00021 43.4 10.4 76 85-163 202-279 (629)
28 PLN03181 glycosyltransferase; 79.6 4.5 9.8E-05 43.8 6.6 35 324-359 180-214 (453)
29 KOG1950 Glycosyl transferase, 69.7 4.1 9E-05 43.3 3.4 154 341-506 122-288 (369)
30 cd02515 Glyco_transf_6 Glycosy 69.4 1E+02 0.0023 31.7 13.1 124 340-476 120-247 (271)
31 PF05704 Caps_synth: Capsular 66.3 30 0.00064 35.5 8.7 42 204-248 41-85 (276)
32 KOG1928 Alpha-1,4-N-acetylgluc 64.1 3.4 7.3E-05 44.2 1.3 33 329-365 227-259 (409)
33 PF11051 Mannosyl_trans3: Mann 63.7 4.5 9.8E-05 41.2 2.1 34 334-367 81-114 (271)
34 PF04488 Gly_transf_sug: Glyco 41.0 14 0.00031 31.7 1.2 35 326-364 62-97 (103)
35 TIGR02978 phageshock_pspC phag 39.1 1.5E+02 0.0033 26.8 7.6 25 80-104 73-97 (121)
36 PLN02718 Probable galacturonos 33.4 1.1E+02 0.0023 35.1 6.8 73 87-162 187-261 (603)
37 PF03314 DUF273: Protein of un 32.9 26 0.00056 34.9 1.7 24 336-359 34-57 (222)
38 cd02514 GT13_GLCNAC-TI GT13_GL 32.6 1.6E+02 0.0035 31.3 7.7 40 325-364 77-118 (334)
39 PF03071 GNT-I: GNT-I family; 32.3 1.5E+02 0.0033 32.7 7.6 41 325-365 171-213 (434)
40 PF03195 DUF260: Protein of un 29.8 1E+02 0.0022 27.1 4.7 43 117-159 54-100 (101)
41 KOG2264 Exostosin EXT1L [Signa 28.1 1.3E+02 0.0028 34.2 6.1 14 89-102 77-90 (907)
42 PLN02829 Probable galacturonos 28.0 1.4E+02 0.0031 34.2 6.6 16 235-250 327-342 (639)
43 PRK15383 type III secretion sy 24.1 36 0.00078 34.6 1.0 32 345-380 220-251 (335)
44 PRK15382 non-LEE encoded effec 23.9 37 0.0008 34.5 1.0 32 345-380 212-243 (326)
45 PRK15384 type III secretion sy 23.6 36 0.00078 34.6 0.9 32 345-380 217-248 (336)
46 COG4575 ElaB Uncharacterized c 23.2 1.3E+02 0.0027 26.8 4.1 69 90-159 11-85 (104)
47 PF01166 TSC22: TSC-22/dip/bun 22.5 2.1E+02 0.0047 22.8 4.8 33 139-171 16-48 (59)
No 1
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=8.4e-147 Score=1163.38 Aligned_cols=504 Identities=48% Similarity=0.828 Sum_probs=475.4
Q ss_pred CeEeeecCCeeeEEEccCCCCCCCcchhhhhcccccccccchHHHHHHHHHhhhHHHHHHHHHhhcCccCCCCCcCcccc
Q 010187 1 MKFYISTTGIKRVTISNTGTGKRSSAPAAALAGRRIPSSRTLLPVVLVLGIVLPFLFVRVAFLVLESSAVCSSSLGCIGR 80 (516)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (516)
||++|| ||||||||++| +|++|+| |+|||+||+ ||||+||++|++||||||+||++|++||||+++||| +||+||
T Consensus 1 ~~~~~~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~f~f~~~~~~~~~~~~~c~~-~~c~~~ 75 (533)
T PLN02870 1 MQLHIS-PSMRSITISSS-NGFIDLM-KIKVAARHI-SYRTLFHTILILAFLLPFVFILTAVVTLEGVNKCSS-FDCLGR 75 (533)
T ss_pred Cceeec-CccceEEEecC-CcHHHHH-HHHhhhccc-hhhhHHHHHHHHHHHHhHHHHhhhhhhhcccccCCc-cccccc
Confidence 899999 99999999997 9999999 999999999 999999999999999999999999999999999999 999999
Q ss_pred c-----cccCCCcchHHHHHHHHHHHHhhcCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Q 010187 81 R-----IFSGSDTSLKLREELTRALIEAKDGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQS 155 (516)
Q Consensus 81 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~ 155 (516)
| +||++|+. ++++|++++|.|++.+|.+.+++ +|+|+++++++|++.+|||+++++|||||++++|||+++
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~d~~---lp~s~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~ 151 (533)
T PLN02870 76 RLGPRLLGRVDDSE-RLVRDFYKILNEVNTEEIPDGLK---LPDSFSQLVSDMKNNHYDAKTFAFVLRAMMEKFERELRE 151 (533)
T ss_pred ccCccccCCCCchh-hhHHHHHHHHHHhcccccccccc---CChhHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9 66666655 89999999999999999999998 999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHhcCCCCcccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcC
Q 010187 156 SRQRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSA 235 (516)
Q Consensus 156 ~~~~~~~~~~la~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~ 235 (516)
+|+|++|++||||+|+|||||||+||||+|||+++.+++++|++|..|+++||+++|||++|||+||+||||||++.|++
T Consensus 152 ~~~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~ 231 (533)
T PLN02870 152 SKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSL 231 (533)
T ss_pred HHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCccccc---ccc
Q 010187 236 RPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDF---EYE 312 (516)
Q Consensus 236 ~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i---~~p 312 (516)
+|+++|||||||++||.+|++||++|++++|+|||+|+|+|+|++.+++||++|+|+.+.++.+||++...... ..|
T Consensus 232 ~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 311 (533)
T PLN02870 232 KPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTP 311 (533)
T ss_pred CccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999876543221 145
Q ss_pred hhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccc
Q 010187 313 GENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYK 392 (516)
Q Consensus 313 ~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~ 392 (516)
+++.++++.++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||......+..++++
T Consensus 312 ~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~ 391 (533)
T PLN02870 312 RTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFR 391 (533)
T ss_pred hhhhcccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhh
Confidence 66778899999999999999999999999999999999999999999999999999999999999996532222346778
Q ss_pred cccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCcc
Q 010187 393 DYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSW 472 (516)
Q Consensus 393 ~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~W 472 (516)
.|+||++|.+..+|+++.||||||||||||++||++++++++++|++++.++++.+||||+||++|++|+|++++||++|
T Consensus 392 ~YfNfs~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rW 471 (533)
T PLN02870 392 NYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSW 471 (533)
T ss_pred hhcccccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHH
Confidence 89999999999999999999999999999999999999999999999876556789999999999999999999999999
Q ss_pred ccccCCCCchhhhhhhcCCCeEEeeeCCCCCCccCCCCCCCC
Q 010187 473 HVAELGQRSLEAHEETLKSAAVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 473 N~~~lgy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
|++++||+... ..+.+++|+||||+|++|||++.++++||+
T Consensus 472 N~~gLgy~~~~-~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~ 512 (533)
T PLN02870 472 HMLGLGYQSKT-NIESVKKAAVIHYNGQSKPWLEIGFEHLRP 512 (533)
T ss_pred hcCCCCCcccc-cccccCCcEEEEECCCCCCccccCccchhH
Confidence 99999998754 567889999999999999999999999986
No 2
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=1e-145 Score=1159.49 Aligned_cols=513 Identities=81% Similarity=1.295 Sum_probs=467.6
Q ss_pred CeEeeecCCeeeEEEccCCCCCCCc---chhhhhcccccccccchHHHHHHHHHhhhHHHHHHHHHhhcCccCCCCCcCc
Q 010187 1 MKFYISTTGIKRVTISNTGTGKRSS---APAAALAGRRIPSSRTLLPVVLVLGIVLPFLFVRVAFLVLESSAVCSSSLGC 77 (516)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (516)
|||||||+|||+||||+.|.|.... .+.++||+||+ ||||+||++|+|||||||+|||+|++||||+++|||++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~f~~~~~~~~~~~~~c~s~~~c 79 (535)
T PLN02867 1 MKFYISTTGIKKVTISNPGSGKGSGGCAAAAAAAAARRF-SGRTLLPVLLLLAIVLPFLFVRIAFLVLESASACNSPLDC 79 (535)
T ss_pred CeeEEecCceeEEEecCCCCCCCCCcchHHHHHHhhcee-eheeHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccc
Confidence 9999999999999999976444333 33447899999 9999999999999999999999999999999999998999
Q ss_pred cccccccCCCcchHHHHHHHHHHHHhhcCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHh
Q 010187 78 IGRRIFSGSDTSLKLREELTRALIEAKDGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSR 157 (516)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~ 157 (516)
+|||++||+|++.+++||++|+|.||+.++.++... +++|+||++++.+|++.+|||++++.|||||++++|||++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~ 158 (535)
T PLN02867 80 IGLRLFGGSDTSLKLREELTRALVEAKEQDDGGRGT-KGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSAR 158 (535)
T ss_pred cchhhhcCCCchhHHHHHHHHHHHHhhhccccCcch-hhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999765554443 2399999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCcccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCC
Q 010187 158 QRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARP 237 (516)
Q Consensus 158 ~~~~~~~~la~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p 237 (516)
+|++|++||||+|+|||||||+||||+|||+++++++++|++|.+|+++||+++|||++|||+||+||||||++.|+++|
T Consensus 159 ~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a~~p 238 (535)
T PLN02867 159 QRESIYWHLASHGIPKSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNAANP 238 (535)
T ss_pred HHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhh
Q 010187 238 EKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRR 317 (516)
Q Consensus 238 ~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~ 317 (516)
+++|||||||++||.+|++||++|++++|+|||+|+|+|+|++.+++||++|+|+.+.++.+||++........+....+
T Consensus 239 ~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (535)
T PLN02867 239 EKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKR 318 (535)
T ss_pred cceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhcccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999988888887643221112223345
Q ss_pred hcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCccccccccc
Q 010187 318 CLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNF 397 (516)
Q Consensus 318 ~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnf 397 (516)
++++++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||.|..+...++..+++.+|+||
T Consensus 319 ~~~~~~pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNf 398 (535)
T PLN02867 319 SLEALSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNF 398 (535)
T ss_pred chhhcChhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccc
Confidence 67889999999999999999999999999999999999999999999999999999999987554333344677889999
Q ss_pred CCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccC
Q 010187 398 SYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAEL 477 (516)
Q Consensus 398 s~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~l 477 (516)
++|.+..+++++.||||+|||||||++||++++|+++++|++++.+.+..+||||+||++|++|+|++++||++||+.++
T Consensus 399 snp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gL 478 (535)
T PLN02867 399 SHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGL 478 (535)
T ss_pred cchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCC
Confidence 99998889999999999999999999999999999999999987644468999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCeEEeeeCCCCCCccCCCCCCCCC
Q 010187 478 GQRSLEAHEETLKSAAVLHFSGPAKPWLEIGLPEKRPT 515 (516)
Q Consensus 478 gy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr~~ 515 (516)
||+......+.+++|+||||+|++|||+++++|+||+.
T Consensus 479 gy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR~~ 516 (535)
T PLN02867 479 GSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVRSL 516 (535)
T ss_pred CcccccchhhhcCCcEEEEECCCCCcccccCCCchhHH
Confidence 99765423456789999999999999999999999963
No 3
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=3.8e-145 Score=1150.99 Aligned_cols=505 Identities=44% Similarity=0.764 Sum_probs=469.1
Q ss_pred CeEeeecCCeeeEEEccCCCCCCCcchhhhhcccccccccchHHHHHHHHHhhhHHHHHHHHHhhcCccCCCCCcCcccc
Q 010187 1 MKFYISTTGIKRVTISNTGTGKRSSAPAAALAGRRIPSSRTLLPVVLVLGIVLPFLFVRVAFLVLESSAVCSSSLGCIGR 80 (516)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (516)
||++|| |||||||||+| +|+.|+| |+|||+|++ ||||+|+|+|+|||||||+|||+|++||||.++||| +||+|+
T Consensus 1 mq~~~s-p~~r~~t~~~~-~~~~~~~-~~~~~~~~~-~~r~~f~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~ 75 (534)
T PLN02659 1 MQLHIS-PSLRHVTVLPG-KGVREFI-KVKVGSRRV-SYRMLFYSLLFFTFLLRFVFVLSTVDTIDGETKCST-LGCLGK 75 (534)
T ss_pred Cceeec-CccceEEEccC-ccHHHHH-HHHHhhcch-hhHHHHHHHHHHHHHhhhhheeehhccccccccccc-cccccc
Confidence 899999 99999999997 9999999 999999999 999999999999999999999999999999999999 999999
Q ss_pred c----cccCCCcchHHHHHHHHHHHH-hhcCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Q 010187 81 R----IFSGSDTSLKLREELTRALIE-AKDGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQS 155 (516)
Q Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~ 155 (516)
| +.||++++.++++|++|+|.| ++.+|+|++.+ +|+||++++.+|++.+|||+++++|||||++++|||+++
T Consensus 76 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~~ 152 (534)
T PLN02659 76 RLGPRILGRRLDSANVPEVMYQVLEQPLSNDELKGRSD---IPQTLEEFMDEVKNSRSDARAFALKLREMVTLLEQRTRT 152 (534)
T ss_pred ccCcccccCCCcccccHHHHHHHHHhhhcccccCCccc---cchHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9 334445555999999999999 99999999999 999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHhcCCCCcccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcC
Q 010187 156 SRQRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSA 235 (516)
Q Consensus 156 ~~~~~~~~~~la~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~ 235 (516)
+|+|+.+++||||+|+|||+|||+||||+|||+++++++++|++|..|+++||+++|||++|||+||+||||||++.|++
T Consensus 153 ~k~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a~ 232 (534)
T PLN02659 153 AKIQEYLYRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNAL 232 (534)
T ss_pred HHHHHHHHHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcc---cccccc
Q 010187 236 RPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKH---EDFEYE 312 (516)
Q Consensus 236 ~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~---~~i~~p 312 (516)
+|+++|||||||++||.||++||++|++++|+|||+|+|+|+|++.+|+||++|+++.+.++.+|+.+... ...+.|
T Consensus 233 ~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (534)
T PLN02659 233 RPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKP 312 (534)
T ss_pred CccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999998888777644321 111244
Q ss_pred hhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccc
Q 010187 313 GENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYK 392 (516)
Q Consensus 313 ~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~ 392 (516)
..+..+++.++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||......+..++++
T Consensus 313 ~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~ 392 (534)
T PLN02659 313 HVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLK 392 (534)
T ss_pred cccccccccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHH
Confidence 44556788899999999999999999999999999999999999999999999999999999999996432111235678
Q ss_pred cccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCcc
Q 010187 393 DYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSW 472 (516)
Q Consensus 393 ~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~W 472 (516)
.+++|++|.+...|+++.||||+|||||||++||++++++++++|++++.+.++.+||||+||++|++|+|++++||++|
T Consensus 393 ~yL~~s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rW 472 (534)
T PLN02659 393 SYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFW 472 (534)
T ss_pred HhhcccchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhh
Confidence 89999999998899999999999999999999999999999999999876556889999999999999999999999999
Q ss_pred ccccCCCCchhhhhhhcCCCeEEeeeCCCCCCccCCCCCCCC
Q 010187 473 HVAELGQRSLEAHEETLKSAAVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 473 N~~~lgy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
|+.++||+... ..+.+++|+||||+|++|||+++++|+||+
T Consensus 473 N~~gLg~~~~~-~~~~i~~paIIHYnG~~KPW~~~~~~~yr~ 513 (534)
T PLN02659 473 HMLGLGYQENT-SLADAESAGVVHFNGRAKPWLDIAFPQLRP 513 (534)
T ss_pred eecCCcccccc-cccccCCcEEEEECCCCCccccccCCcchh
Confidence 99999998754 456779999999999999999999999996
No 4
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=1.7e-108 Score=880.83 Aligned_cols=407 Identities=39% Similarity=0.715 Sum_probs=372.3
Q ss_pred CcchHHHHHH-------HHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 010187 87 DTSLKLREEL-------TRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQ 158 (516)
Q Consensus 87 ~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~ 158 (516)
.++..+.+|| +|+|.|++ +.+||..+.. +.+.|++++++||+.+|||+++++|||+|++++|||+++||+
T Consensus 205 ~~~~~l~~el~~~i~e~~r~l~~a~~d~~lp~~~~~--~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~ 282 (639)
T PLN02829 205 KANPHFTRELRLRIKEVQRVLGDASKDSDLPKNANE--KLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKK 282 (639)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccCCCCCChhHHH--HHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566555 56666655 4588886664 788999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCcccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCCC
Q 010187 159 RESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPE 238 (516)
Q Consensus 159 ~~~~~~~la~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p~ 238 (516)
|++|++||||+|+|||||||+||||+|||+++++++++|++| +++||+++|||++|||+||+||||||++.|+++|+
T Consensus 283 q~~~l~~laa~t~PK~lHCL~mrLt~Ey~~~~~~~~~~p~~~---~l~dp~l~Hy~ifSdNVLAasVVVnStv~na~~p~ 359 (639)
T PLN02829 283 QTMFLTQLTAKTLPKGLHCLPLRLTTEYYNLNSSEQQFPNQE---KLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPS 359 (639)
T ss_pred HHHHHHHHHhhhCCCCccccchhhHHHHHhCChhhccCCChh---hccCCccceEEEEecceeEEEeeeehhhhcccCcc
Confidence 999999999999999999999999999999999999999876 89999999999999999999999999999999999
Q ss_pred ceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhhh
Q 010187 239 KLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRC 318 (516)
Q Consensus 239 ~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~ 318 (516)
++|||||||++||.+|++||++|++++|+|||+|+++|+|++.+|+||++|+++...++ +||...... ...+
T Consensus 360 k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~~~pvl~ql~~~~~~~-~yf~~~~~~-------~~~~ 431 (639)
T PLN02829 360 KHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVLKQLGSQSMID-YYFRAHRAN-------SDSN 431 (639)
T ss_pred ceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhcccccccccHHHHHhhhhhhhh-hhhhccccC-------cccc
Confidence 99999999999999999999999999999999999999999999999999999887765 444333211 1256
Q ss_pred cccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccC
Q 010187 319 LEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFS 398 (516)
Q Consensus 319 l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs 398 (516)
+++++|+|+|.++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||... ++++..+++|+
T Consensus 432 ~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~-----f~r~~~~l~fs 506 (639)
T PLN02829 432 LKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGES-----FHRFDRYLNFS 506 (639)
T ss_pred cccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhh-----hhhhhhhhhcc
Confidence 7889999999999999999999999999999999999999999999999999999999999753 36788899999
Q ss_pred CccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccCC
Q 010187 399 YPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAELG 478 (516)
Q Consensus 399 ~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~lg 478 (516)
+|.+..+|+++.||||+|||||||++||++++|+++++|++.+. +..+||||+||++|++|+|++++||++||+.|+|
T Consensus 507 ~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~--~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLG 584 (639)
T PLN02829 507 NPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH--DRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLG 584 (639)
T ss_pred chHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHcc--CCccccccCCChHHHHhcCceEecChhheecCCC
Confidence 99988899999999999999999999999999999999998874 3578999999999999999999999999999999
Q ss_pred CCchhhhhhhcCCCeEEeeeCCCCCCccCCCCCCCC
Q 010187 479 QRSLEAHEETLKSAAVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 479 y~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
|++.. ..+.+++|+||||+|++|||++.++++||+
T Consensus 585 y~~~v-~~~~i~~aaIIHynG~~KPWle~~i~~yr~ 619 (639)
T PLN02829 585 YNPNV-NQRDIERAAVIHYNGNMKPWLEIGIPKYRN 619 (639)
T ss_pred CCccc-chhcccCCeEEEECCCCCccccCCcccchH
Confidence 98765 678899999999999999999999999986
No 5
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=4.5e-108 Score=876.15 Aligned_cols=404 Identities=38% Similarity=0.684 Sum_probs=371.6
Q ss_pred HHHHHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCCC
Q 010187 94 EELTRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGVP 172 (516)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~P 172 (516)
+|.+|+|.|++ +.++|+.+.. +.+.|++++++||+.+|||+++++|||||++++|||++++|+|++|++||||+|+|
T Consensus 233 ~e~~r~ls~a~~d~dlp~~~~~--k~~~M~~~l~~ak~~~~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~P 310 (657)
T PLN02910 233 RENKRAIGEATSDAELHSSALD--QAKAMGHVLSIAKDQLYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVP 310 (657)
T ss_pred HHHHHHHhhcccccccCchHHH--HHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 55688888876 5699988775 78899999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCCCceEEEEEeCCCCcc
Q 010187 173 KSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYT 252 (516)
Q Consensus 173 k~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p~~ivFHIitD~~~~~ 252 (516)
||||||+||||+|||+++++++++|++| +++||+++|||++|||+||+||||||++.|+++|+++|||||||++||.
T Consensus 311 K~lHCL~mRLt~Ey~~~~~~~~~~p~~~---~l~dp~l~Hy~ifSDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~ 387 (657)
T PLN02910 311 KPLHCLPLQLAADYFLLGFQNKDYVNKK---KLEDPSLYHYAIFSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFA 387 (657)
T ss_pred CCccccchhhHHHHHhCchhhccCCChh---hccCCcceeEEEEecceeeEEeehhhhhhcccCccceEEEEecCccccH
Confidence 9999999999999999999999988776 9999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhH
Q 010187 253 PMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNH 332 (516)
Q Consensus 253 am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y 332 (516)
+|++||++|++++|+|||+|||+|+|++.+++||++|+++.+.+. +||......... ....++++++|+|+|+++|
T Consensus 388 aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~~~~-~yf~~~~~~~~~---~~~~~~k~r~p~ylS~lnY 463 (657)
T PLN02910 388 AMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESARIKE-YYFKANHPSSLS---AGADNLKYRNPKYLSMLNH 463 (657)
T ss_pred HHHHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhhhhh-hhhhcccccccc---ccccccccCCcchhhHHHH
Confidence 999999999999999999999999999999999999999987654 444322111111 1134688899999999999
Q ss_pred HHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcc
Q 010187 333 LRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCA 412 (516)
Q Consensus 333 ~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~y 412 (516)
+|||||++||+++||||||+|+||++||++||++||+|+++|||+||... ++++..+++|++|.+...|+++.||
T Consensus 464 ~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~-----f~r~~~ylnfs~P~i~~yFNs~aCy 538 (657)
T PLN02910 464 LRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKES-----FHRFDKYLNFSNPKISENFDPNACG 538 (657)
T ss_pred HHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchh-----hhhhhhhhccCChhhhhccCCCCce
Confidence 99999999999999999999999999999999999999999999999753 4678889999999998899999999
Q ss_pred cccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccCCCCchhhhhhhcCCC
Q 010187 413 WLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAELGQRSLEAHEETLKSA 492 (516)
Q Consensus 413 fNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~~~~~~i~~~ 492 (516)
||+|||||||++||++++|+.+..|++.+. +..+||||+|||+|++|+|++++||++||+.|+||++.. +.+.+++|
T Consensus 539 fNsGVmVIDL~~WRe~nITe~ye~w~eln~--~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v-~~~~i~~A 615 (657)
T PLN02910 539 WAFGMNMFDLKEWRKRNITGIYHYWQDLNE--DRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDPAL-NQTEIENA 615 (657)
T ss_pred eecccEEEeHHHHHHhhHHHHHHHHHHhcc--cccccccCCCChHHHHHhCceeecCchheecCCCCCccc-ccccccCc
Confidence 999999999999999999998888888763 589999999999999999999999999999999998766 66789999
Q ss_pred eEEeeeCCCCCCccCCCCCCCC
Q 010187 493 AVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 493 ~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
+||||+|++|||++.++++||+
T Consensus 616 AVLHynG~~KPWl~l~i~~Yr~ 637 (657)
T PLN02910 616 AVVHYNGNYKPWLDLAIAKYKP 637 (657)
T ss_pred EEEEeCCCCCcccccCcccchH
Confidence 9999999999999999999996
No 6
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=2.6e-105 Score=848.67 Aligned_cols=406 Identities=37% Similarity=0.676 Sum_probs=371.9
Q ss_pred HHHHHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCCC
Q 010187 94 EELTRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGVP 172 (516)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~P 172 (516)
+|.+|+|.|++ +++++.....+.+.++|++++++||+.+|||+++++|||+|++++|||+++||+|++|++||||+|+|
T Consensus 110 ~e~~~~l~~a~~d~~~~~~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~P 189 (534)
T PLN02742 110 RNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQAQDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALP 189 (534)
T ss_pred HHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 55678888876 45653222222378899999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCCCceEEEEEeCCCCcc
Q 010187 173 KSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYT 252 (516)
Q Consensus 173 k~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p~~ivFHIitD~~~~~ 252 (516)
||||||+||||+|||++++++++.++++.+++++||+++|||++|||++|++||||||+.|+++|+++|||||||++++.
T Consensus 190 K~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~ 269 (534)
T PLN02742 190 KSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDNNLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYG 269 (534)
T ss_pred CCccccchHhHHHHHhCchhhhccccccccccccCCCcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHH
Confidence 99999999999999999999887777788999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhH
Q 010187 253 PMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNH 332 (516)
Q Consensus 253 am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y 332 (516)
+|++||..|++++|+|||+|+++|+|++.+++||++|+++. .++.+||.+.... ...+.++++|+|+|+++|
T Consensus 270 aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~~-~~~~~yf~~~~~~-------~~~~~k~r~p~y~s~~~y 341 (534)
T PLN02742 270 AMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQDS-DTQSYYFSGSQDD-------GKTEIKFRNPKYLSMLNH 341 (534)
T ss_pred HHHHHHhhCCCCccEEEEEEeccccccccccchHHHHhhhh-hhhhhhccccccc-------ccccccccCcccccHHHH
Confidence 99999999999999999999999999999999999999997 5677888665311 113456788999999999
Q ss_pred HHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcc
Q 010187 333 LRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCA 412 (516)
Q Consensus 333 ~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~y 412 (516)
+||+||++||+++||||||+|+||++||++||++||+|+++|||+||... +++|..|+||++|.++.+|+++.||
T Consensus 342 ~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~-----f~ry~~yLnfS~p~i~~~f~~~aC~ 416 (534)
T PLN02742 342 LRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLET-----FHRYHKYLNFSHPLISSHFDPDACG 416 (534)
T ss_pred HHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhh-----hhhhhhhhcccchhhhccCCCCccc
Confidence 99999999999999999999999999999999999999999999999754 4788999999999999999999999
Q ss_pred cccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccCCCCchhhhhhhcCCC
Q 010187 413 WLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAELGQRSLEAHEETLKSA 492 (516)
Q Consensus 413 fNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~~~~~~i~~~ 492 (516)
||+|||||||++||++++|+.++.|++.+. +..+||||+||+++++|+|++++||++||+.|+||+... +.+.+++|
T Consensus 417 fNsGV~ViDL~~WRe~nITe~~~~w~e~n~--~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v-~~~~i~~a 493 (534)
T PLN02742 417 WAFGMNVFDLVAWRKANVTAIYHYWQEQNV--DRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNI-DPRLIESA 493 (534)
T ss_pred cccCcEEEeHHHHHhhcHHHHHHHHHHhcc--ccccccccccchHHHHHcCcceecChhheeccccccccc-chhhccCC
Confidence 999999999999999999999998988763 578999999999999999999999999999999998654 56789999
Q ss_pred eEEeeeCCCCCCccCCCCCCCCC
Q 010187 493 AVLHFSGPAKPWLEIGLPEKRPT 515 (516)
Q Consensus 493 ~IIHy~G~~KPW~~~~~~~yr~~ 515 (516)
+||||+|++|||.+.++++||+.
T Consensus 494 aILHynG~~KPWl~~~i~~yr~~ 516 (534)
T PLN02742 494 AVLHFNGNMKPWLKLAIERYKPL 516 (534)
T ss_pred eEEEECCCCCcccccCCcccchH
Confidence 99999999999999999999973
No 7
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=5.9e-100 Score=808.49 Aligned_cols=383 Identities=37% Similarity=0.677 Sum_probs=347.6
Q ss_pred ccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCCCcccchhHHHHHHHHHhchhhhcCC
Q 010187 117 TLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRL 196 (516)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~ 196 (516)
+.+.|++++.+||+ .|||.++++|||+|++++|||++++|+|++|++||||+|+|||||||+||||+|||++++++.+.
T Consensus 157 ~~k~~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~ 235 (559)
T PLN02523 157 RVKVARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDE 235 (559)
T ss_pred HHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhcc
Confidence 45578899999997 89999999999999999999999999999999999999999999999999999999999887654
Q ss_pred CCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhcccccc
Q 010187 197 PSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQY 276 (516)
Q Consensus 197 ~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F 276 (516)
++ +.+++++||+++|||++|||++|++|||+||+.|+++|+++|||||||++|+.+|++||.+|++++|+|||++|++|
T Consensus 236 ~~-~~~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf 314 (559)
T PLN02523 236 GK-PPPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDY 314 (559)
T ss_pred CC-CcchhccCCCcceEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehh
Confidence 33 46789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeee
Q 010187 277 DWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVV 356 (516)
Q Consensus 277 ~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV 356 (516)
+|++.+++||++|+++.+.+ .+||..... .......++++++|+|+|+++|+||+|||+||+++||||||+||||
T Consensus 315 ~~ln~~~~pvlk~l~s~~~~-~~~f~~~~~----~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVV 389 (559)
T PLN02523 315 KFLNSSYVPVLRQLESANLQ-KFYFENKLE----NATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVV 389 (559)
T ss_pred hhcccccchHHHhhhhhhhh-hhhcccccc----ccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEe
Confidence 99999999999999986654 455543211 1112235677888999999999999999999999999999999999
Q ss_pred ccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHH
Q 010187 357 QHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHK 436 (516)
Q Consensus 357 ~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~ 436 (516)
++||++||++||+|+++|||+||... ++++.++++|++|.+...|+++.||||+|||||||++||++++|++++.
T Consensus 390 q~DLseLw~iDL~gkv~aAVeDc~~~-----~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~ 464 (559)
T PLN02523 390 QKDLTGLWKIDMDGKVNGAVETCFGS-----FHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHY 464 (559)
T ss_pred cCCHHHHHhCcCCCceEEEehhhhhH-----HHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHH
Confidence 99999999999999999999999642 3577888999999988889999999999999999999999999999987
Q ss_pred HHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccCCCCchhhhhhhcCCCeEEeeeCCCCCCccCCCCCCCC
Q 010187 437 WLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAELGQRSLEAHEETLKSAAVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 437 ~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
|.+.+. +..+||||+|||+|++|+|++++||++||++++||.+.. +.+.+++|+||||+|++|||++.++++||+
T Consensus 465 w~~ln~--~~~l~DqdaLpp~LivF~gri~~LD~rWNvlglGy~~~i-~~~~i~~paIIHYnG~~KPWle~~i~~yr~ 539 (559)
T PLN02523 465 WQNLNE--NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSI-SMDEIRNAAVIHFNGNMKPWLDIAMNQFKP 539 (559)
T ss_pred HHHhcc--ccccccccccchHHHHhcCceEecCchhhccCCccCCCc-cccccCCCEEEEECCCCCccccCCCCcchH
Confidence 776543 578999999999999999999999999999999997755 567789999999999999999999999986
No 8
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1e-99 Score=818.07 Aligned_cols=392 Identities=34% Similarity=0.550 Sum_probs=352.3
Q ss_pred HHHHHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCCC
Q 010187 94 EELTRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGVP 172 (516)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~P 172 (516)
+|.+|+|.|++ +.++|+.... +.+.|++++++||+..|||+++++|||||++++|||++++++|++|++||||+|+|
T Consensus 218 ~e~~~~l~~~~~d~dlp~~~~~--~~~~m~~~~~~ak~~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~P 295 (629)
T PLN02769 218 QEHERVLSESITDADLPPFIQK--KLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMP 295 (629)
T ss_pred HHHHHHHhhccccccCChhHHH--HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 45577777765 4588877664 77899999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCCCceEEEEEeCCCCcc
Q 010187 173 KSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYT 252 (516)
Q Consensus 173 k~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p~~ivFHIitD~~~~~ 252 (516)
||||||+||||+|||+++++++++|++| +++||+++|||++|||+||++||||||+.|+++|+++|||||||++|+.
T Consensus 296 K~lHCL~mrLt~ey~~~~~~~~~~~~~~---~l~d~~l~Hy~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~ 372 (629)
T PLN02769 296 KSHHCLSMRLTVEYFKSSSLDMEDSNSE---KFSDPSLRHYVIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYY 372 (629)
T ss_pred CCccccchhhHHHHHhCchhhccCCchh---hccCCccceEEEEeccceeeeeehhhhhhhccCccceEEEEecChhhHH
Confidence 9999999999999999999999888766 9999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhH
Q 010187 253 PMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNH 332 (516)
Q Consensus 253 am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y 332 (516)
+|++||.+|++++|+|||+|+|+|+|.+. ..++++|++..+.++..|+++.. | ..+.++++|+|+++|
T Consensus 373 am~~WF~~n~~~~a~v~v~n~e~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~------~-----~~~~~~~eyiS~~nh 440 (629)
T PLN02769 373 AMKHWFDRNSYKEAAVQVLNIEDLILKDL-DKFALKQLSLPEEFRVSFRSVDN------P-----SSKQMRTEYLSVFSH 440 (629)
T ss_pred HHHHHHhcCCCccceEEEeeeeeeeeccc-chHHHHhhccchhhhhhhccCCC------C-----chhccCcccccHHHH
Confidence 99999999999999999999999999764 47888999888877666654321 1 234568999999999
Q ss_pred HHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcc
Q 010187 333 LRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCA 412 (516)
Q Consensus 333 ~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~y 412 (516)
+|||||++||+++||||||+|+||++||++||++||+|+++|||+||... .++++.|++ ..+|+++.||
T Consensus 441 ~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~r-----l~~~~~yl~------~~~F~~~~Cy 509 (629)
T PLN02769 441 SHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVR-----LGQLKNYLG------DTNFDTNSCA 509 (629)
T ss_pred HHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhh-----hhhhhhhhc------ccCCCccccc
Confidence 99999999999999999999999999999999999999999999999643 234444443 3468889999
Q ss_pred cccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccCCCCchhhhhhhcCCC
Q 010187 413 WLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAELGQRSLEAHEETLKSA 492 (516)
Q Consensus 413 fNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~~~~~~i~~~ 492 (516)
||+|||||||++||++++++++++|++++...+...|++++||+++++|+|++++||++||++++||+... ..+.+++|
T Consensus 510 FNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i-~~~~i~~p 588 (629)
T PLN02769 510 WMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGI-DEQAIKKA 588 (629)
T ss_pred cccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccccccccc-cccccCCc
Confidence 99999999999999999999999999886543467899999999999999999999999999999998765 55778999
Q ss_pred eEEeeeCCCCCCccCCCCCCCC
Q 010187 493 AVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 493 ~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
+||||+|++|||++.++++||+
T Consensus 589 aIIHYnG~~KPW~e~~i~~yr~ 610 (629)
T PLN02769 589 AVLHYNGNMKPWLELGIPKYKK 610 (629)
T ss_pred EEEEECCCCCCccCCCCChHHH
Confidence 9999999999999999999985
No 9
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=3.4e-95 Score=780.07 Aligned_cols=383 Identities=36% Similarity=0.649 Sum_probs=347.8
Q ss_pred HHHHHHHHHHhhc-CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCC
Q 010187 93 REELTRALIEAKD-GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGV 171 (516)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~ 171 (516)
++|++|+|.|++. .++|+.+.. +...|++++++|++.+|||++|++|||||++++|||+++||+|++|++||||+|+
T Consensus 200 i~e~~~~l~~~~~d~~lp~~~~~--~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~ 277 (603)
T PLN02718 200 TKELERAVGDATKDKDLSKSALQ--RMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTT 277 (603)
T ss_pred HHHHHHHHhcccCCCCCCHhHHH--HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3556777777763 477777664 7778999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhHHHHHHHHHhchhhhcCCCCccccCCCCCCCcceEEEEeCCcchhHHHHHHHHhhcCCCCceEEEEEeCCCCc
Q 010187 172 PKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTY 251 (516)
Q Consensus 172 Pk~~hcl~~rl~~e~~~~~~~~~~~~~~e~~~~l~d~~~ihIv~~sDn~laasVvI~Siv~Ns~~p~~ivFHIitD~~~~ 251 (516)
|||+|||+||||+|||+++++++++|++| +++||+++|||+++||++++||+|+|++.|+.+|++++||||||++++
T Consensus 278 PK~lhCL~~rLt~ey~~~~~~~~~~~~~~---~l~d~~~~Hia~~sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~ 354 (603)
T PLN02718 278 PKGLHCLSMRLTAEYFALDPEKRQLPNQQ---RYNDPDLYHYVVFSDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNY 354 (603)
T ss_pred CCCccccchhhHHHHhhCChhhccCCChh---hccCCcceeEEEEcCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCH
Confidence 99999999999999999999999988766 999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhcccccchhhhccccccccccccchhHHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhh
Q 010187 252 TPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMN 331 (516)
Q Consensus 252 ~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~ 331 (516)
++|+.||..++..++.|+|.++++|.|++.++.+++++ ++..+++|+|.++
T Consensus 355 ~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~-----------------------------l~s~~~~~~S~~~ 405 (603)
T PLN02718 355 PAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMK-----------------------------QNSHDPRYISALN 405 (603)
T ss_pred HHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhh-----------------------------ccccccccccHHH
Confidence 99999999999889999999999999998776655432 1234568999999
Q ss_pred HHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCc
Q 010187 332 HLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHC 411 (516)
Q Consensus 332 y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~ 411 (516)
|+||+||++||+++||||||+|+||++||++||++||+|+++|||+||..... ..++++.++||++|.+.++|+++.|
T Consensus 406 y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~--~~~~~~~~lnfs~p~i~~~fn~~~C 483 (603)
T PLN02718 406 HARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEP--SFRSMDTFINFSDPWVAKKFDPKAC 483 (603)
T ss_pred HHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEecccccccc--chhhhhhhhhccchhhhcccCCCcc
Confidence 99999999999999999999999999999999999999999999999975321 1346677889999998889999999
Q ss_pred ccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccccCCCCchhhhhhhcCC
Q 010187 412 AWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAELGQRSLEAHEETLKS 491 (516)
Q Consensus 412 yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~~~~~~i~~ 491 (516)
|||+|||||||++||++++++++++|++++.+ ..+||||+|||++++|+|++++||++||+.++||+... ..+.+++
T Consensus 484 yfNsGVlLIDLk~WReenITe~~~~~l~~n~~--~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i-~~~~i~~ 560 (603)
T PLN02718 484 TWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVK--RPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGV-GASDIEQ 560 (603)
T ss_pred ccccceEEEeHHHHHhcChHHHHHHHHHhccC--ccccCcccccHHHHHhcCceeecChHHhccCccccccc-cccccCC
Confidence 99999999999999999999999999998753 57899999999999999999999999999999998764 4567899
Q ss_pred CeEEeeeCCCCCCccCCCCCCCC
Q 010187 492 AAVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 492 ~~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
|+||||+|++|||++.++++||+
T Consensus 561 aaIIHYnG~~KPWle~~i~~yr~ 583 (603)
T PLN02718 561 AAVIHYDGVMKPWLDIGIGKYKR 583 (603)
T ss_pred CEEEEECCCCCccccCChhhHHH
Confidence 99999999999999999999986
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.7e-54 Score=433.35 Aligned_cols=250 Identities=44% Similarity=0.812 Sum_probs=218.7
Q ss_pred ceEEEEeCCcchhHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHHH
Q 010187 211 HHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEML 290 (516)
Q Consensus 211 ihIv~~sDn~laasVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l 290 (516)
+|||+++||+++++|+++|++.|+++|.+++|||+||++++++|+.||..++..++.|+|.+++++.|.+....++++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999999999999999999999999999999999999999999999999899999999999888776666666665
Q ss_pred HHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCC
Q 010187 291 EAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNG 370 (516)
Q Consensus 291 ~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g 370 (516)
++.. ....++..+++++|.++|+||+||++||+++||||||+|+||++||++||++||+|
T Consensus 81 ~~~~--------------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~ 140 (257)
T cd06429 81 ESEA--------------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGG 140 (257)
T ss_pred hccc--------------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCC
Confidence 4321 01345667889999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCC
Q 010187 371 KVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQ 450 (516)
Q Consensus 371 ~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~D 450 (516)
+++|||+| |||||||||||++||++++++++++|++++.+....++|
T Consensus 141 ~~~aav~d---------------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~ 187 (257)
T cd06429 141 GVAGAVET---------------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWK 187 (257)
T ss_pred CEEEEEhh---------------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhh
Confidence 99999987 478999999999999999999999999887542235666
Q ss_pred CCCCChhhhhcCCcEEEcCCccccccCCCCchhhhhhhcCCCeEEeeeCCCCCCccCCCCCCCC
Q 010187 451 PGALPPALLALDGNVHPIDPSWHVAELGQRSLEAHEETLKSAAVLHFSGPAKPWLEIGLPEKRP 514 (516)
Q Consensus 451 Qd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr~ 514 (516)
|+.+++++++|+|+++.||++||++++|++... ..+.+++|+||||+|+.|||+..+.++||+
T Consensus 188 ~~dqd~ln~~~~~~~~~L~~~wN~~~l~~~~~~-~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~ 250 (257)
T cd06429 188 LITLPPGLIVFYGLTSPLDPSWHVRGLGYNYGI-RPQDIKAAAVLHFNGNMKPWLRTAIPSYKE 250 (257)
T ss_pred cCCccHHHHHccCeeEECChHHcccCCcccccc-cccccCCcEEEEECCCCCCcCCCCCChHHH
Confidence 666666668999999999999999988887543 245567999999999999999999888875
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=2e-41 Score=351.07 Aligned_cols=250 Identities=21% Similarity=0.308 Sum_probs=175.1
Q ss_pred CCcceEEEEeCCcch--hHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchh
Q 010187 208 PSFHHVVLLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVG 285 (516)
Q Consensus 208 ~~~ihIv~~sDn~la--asVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~ 285 (516)
++.+|||+++|+.++ ++|+|+|++.|+++ ..+.|||++|+++.+..+..-.
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~-------------------------- 75 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSA-------------------------- 75 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHH--------------------------
Confidence 468999999998653 99999999999876 4799999999998643221100
Q ss_pred HHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccC-CCCeEEEEecCeeeccCchHHh
Q 010187 286 VKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFP-DLNKILFLDDDVVVQHDLSSLL 364 (516)
Q Consensus 286 vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP-~ldKVLYLD~DvVV~~DLseLw 364 (516)
+...|..+..+..++ .+.+. .+ ....++|.++|+||+||++|| +++||||||+|+||++||++||
T Consensus 76 ----------l~~~~~~~i~~~~id-~~~~~-~~--~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~ 141 (334)
T PRK15171 76 ----------LAKQYNTRINIYLIN-CERLK-SL--PSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELI 141 (334)
T ss_pred ----------HHHhcCCeEEEEEeC-HHHHh-CC--cccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHH
Confidence 001111111111111 10111 11 224689999999999999999 6999999999999999999999
Q ss_pred ccCCCCCeEEEEe-cCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhc-
Q 010187 365 ELDLNGKVVGAVV-GSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNL- 442 (516)
Q Consensus 365 ~iDL~g~~iaAV~-d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~- 442 (516)
++|++|..+|||. |+... + .......++. | ++ ...|||||||||||++||++++++++++++..+.
T Consensus 142 ~~dl~~~~~aav~~d~~~~--~--~~~~~~~l~~--~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~ 209 (334)
T PRK15171 142 DLDFAENEIAAVVAEGDAE--W--WSKRAQSLQT--P----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEI 209 (334)
T ss_pred hccCCCCeEEEEEeccchh--H--HHHHHHhcCC--c----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhcccc
Confidence 9999977666664 43210 0 0111111221 1 11 2469999999999999999999999999998642
Q ss_pred cCCCCcCCCCCCChhhhhcCCcEEEcCCcccccc-CCCCchh-hhhhhcCCCeEEeeeCCCCCCccCCCCCCC
Q 010187 443 KSGLELWQPGALPPALLALDGNVHPIDPSWHVAE-LGQRSLE-AHEETLKSAAVLHFSGPAKPWLEIGLPEKR 513 (516)
Q Consensus 443 ~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~-lgy~~~~-~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr 513 (516)
...+.++|||+|| .+|.|+++.||++||++. +.+.... ......++|+||||+|+.|||+..+.++++
T Consensus 210 ~~~~~~~DQDiLN---~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~~~~~ 279 (334)
T PRK15171 210 VSRITHLDQDVLN---ILLAGKVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWADYPVS 279 (334)
T ss_pred ccceeecChhHHH---HHHcCCeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCCCchH
Confidence 1246789999999 589999999999999973 2222110 011224689999999999999987766654
No 12
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=4.3e-40 Score=326.27 Aligned_cols=239 Identities=21% Similarity=0.307 Sum_probs=171.4
Q ss_pred ceEEEEeCC-cch--hHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHH
Q 010187 211 HHVVLLTDN-VLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVK 287 (516)
Q Consensus 211 ihIv~~sDn-~la--asVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl 287 (516)
|||++.+++ .++ ++|+++|+++|+++ .++|||++++++.+..+..-......+..+++
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~----------------- 61 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYEL----------------- 61 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEE-----------------
Confidence 678766665 553 99999999999976 69999999999864322211110000000111
Q ss_pred HHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccC
Q 010187 288 EMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELD 367 (516)
Q Consensus 288 ~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iD 367 (516)
+ .++.+. + .... ...++++..+|+||++|+++|+++||||||+|+||++||++||++|
T Consensus 62 -------------~------~~~~~~-~-~~~~-~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~ 119 (246)
T cd00505 62 -------------I------PVDILD-S-VDSE-HLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTP 119 (246)
T ss_pred -------------E------eccccC-c-chhh-hhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhcc
Confidence 0 111000 0 0011 1135789999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCC
Q 010187 368 LNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLE 447 (516)
Q Consensus 368 L~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~ 447 (516)
++|+++|||+|+..... .+.++.. .+...+.+||||||||||+++||++++.+++.++..++. ....
T Consensus 120 l~~~~~aav~d~~~~~~---~~~~~~~---------~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~-~~~~ 186 (246)
T cd00505 120 LGGQELAAAPDPGDRRE---GKYYRQK---------RSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSL-SSLS 186 (246)
T ss_pred CCCCeEEEccCchhhhc---cchhhcc---------cCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhc-ccCc
Confidence 99999999999864211 1111111 123345789999999999999998888888888776654 3578
Q ss_pred cCCCCCCChhhhhcCCc---EEEcCCccccccCCCCchh-hhhhhcCCCeEEeeeCCCCCCcc
Q 010187 448 LWQPGALPPALLALDGN---VHPIDPSWHVAELGQRSLE-AHEETLKSAAVLHFSGPAKPWLE 506 (516)
Q Consensus 448 ~~DQd~LN~~ll~F~~~---~~~L~~~WN~~~lgy~~~~-~~~~~i~~~~IIHy~G~~KPW~~ 506 (516)
++|||+|| .+|.++ ++.||++||++..++.... ...+..++|+||||+|+.|||..
T Consensus 187 ~~DQd~LN---~~~~~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 187 GGDQDLLN---TFFKQVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred cCCcHHHH---HHHhcCCCeEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCCC
Confidence 89999999 478888 9999999999865543321 12346789999999999999963
No 13
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2.9e-39 Score=327.43 Aligned_cols=246 Identities=20% Similarity=0.285 Sum_probs=165.5
Q ss_pred eEEEEeCCcc-hhHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHHH
Q 010187 212 HVVLLTDNVL-AASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEML 290 (516)
Q Consensus 212 hIv~~sDn~l-aasVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l 290 (516)
-||++.+|+. .++|+|+|++.|+. ..++|||++|+++.+..+.+...-...+..|
T Consensus 4 ~iv~~~~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i---------------------- 59 (280)
T cd06431 4 AIVCAGYNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEV---------------------- 59 (280)
T ss_pred EEEEccCCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEE----------------------
Confidence 3677775543 48999999999985 4599999999998665444332100001111
Q ss_pred HHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchh-hHHHHhhccccC-CCCeEEEEecCeeeccCchHHhcc--
Q 010187 291 EAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLM-NHLRIYIPELFP-DLNKILFLDDDVVVQHDLSSLLEL-- 366 (516)
Q Consensus 291 ~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~-~y~Rf~LPellP-~ldKVLYLD~DvVV~~DLseLw~i-- 366 (516)
.++. ++ .+...+......++|.. +|+||+||++|| +++||||||+|+||++||++||++
T Consensus 60 --------~f~~------i~---~~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~ 122 (280)
T cd06431 60 --------SFYN------AE---ELKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFH 122 (280)
T ss_pred --------EEEE------hH---HhhhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhh
Confidence 1110 00 00011111223466654 889999999999 799999999999999999999998
Q ss_pred CCCC-CeEEEEecCCCCCCCCCCccccccc-ccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhcc-
Q 010187 367 DLNG-KVVGAVVGSSCGDNCCPGRKYKDYL-NFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLK- 443 (516)
Q Consensus 367 DL~g-~~iaAV~d~~~~~~~~~~~~~~~~L-nfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~- 443 (516)
|+.| .++|||+|.... |.... ....| +.....|||||||||||++||++++++++..+.+++..
T Consensus 123 ~~~~~~~~a~v~~~~~~--------~~~~~~~~~~~-----~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~ 189 (280)
T cd06431 123 KFTGQQVLGLVENQSDW--------YLGNLWKNHRP-----WPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMS 189 (280)
T ss_pred hcCCCcEEEEeccchhh--------hhhhhhhccCC-----CcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhh
Confidence 7866 467777764210 10000 00011 11123599999999999999999999998876665421
Q ss_pred -CCCCcCCCCCCChhhhhcCCc---EEEcCCccccccCCCCchhhhhhhcCCCeEEeeeCCCCCCccCCC-CCCCC
Q 010187 444 -SGLELWQPGALPPALLALDGN---VHPIDPSWHVAELGQRSLEAHEETLKSAAVLHFSGPAKPWLEIGL-PEKRP 514 (516)
Q Consensus 444 -~~~~~~DQd~LN~~ll~F~~~---~~~L~~~WN~~~lgy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~-~~yr~ 514 (516)
....++|||+|| .+|.++ ++.||++||++..............++|+||||+|+.|||..... +.||+
T Consensus 190 ~~~~~~~DQDiLN---~v~~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~ 262 (280)
T cd06431 190 MLSTSLADQDIFN---AVIKQNPFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRN 262 (280)
T ss_pred cCCCCcCcHHHHH---HHHcCCcceeEECCCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHH
Confidence 246789999999 478999 899999999984211111101123578999999999999997765 77764
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=5.3e-39 Score=317.90 Aligned_cols=239 Identities=23% Similarity=0.372 Sum_probs=176.4
Q ss_pred ceEEEEeCCcc--hhHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHH
Q 010187 211 HHVVLLTDNVL--AASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKE 288 (516)
Q Consensus 211 ihIv~~sDn~l--aasVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~ 288 (516)
+|||+++|+.+ .++|+++|+++|+++ +.++|||++++++.+..+..-..
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~---------------------------- 51 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKEL---------------------------- 51 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHH----------------------------
Confidence 69999999854 489999999999986 57999999999875432111000
Q ss_pred HHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCC
Q 010187 289 MLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDL 368 (516)
Q Consensus 289 ~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL 368 (516)
...+.....+..++.+. +.. .. ...++++..+|+||++|+++|+++||||||+|+||++||++||++|+
T Consensus 52 --------~~~~~~~i~~~~i~~~~-~~~-~~-~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~ 120 (248)
T cd04194 52 --------LKKYNSSIEFIKIDNDD-FKF-FP-ATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL 120 (248)
T ss_pred --------HHhcCCeEEEEEcCHHH-Hhc-CC-cccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc
Confidence 00000000011111110 000 11 13467899999999999999999999999999999999999999999
Q ss_pred CCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCc
Q 010187 369 NGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLEL 448 (516)
Q Consensus 369 ~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~ 448 (516)
+|+++|||.|+..... ..... ..+.....+||||||||+|+++||+++++++++++++++.. ...+
T Consensus 121 ~~~~~aa~~d~~~~~~----~~~~~---------~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~-~~~~ 186 (248)
T cd04194 121 GDNLLAAVRDPFIEQE----KKRKR---------RLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGG-RLIY 186 (248)
T ss_pred CCCEEEEEecccHHHH----HHHHh---------hcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCC-ceee
Confidence 9999999999874310 00000 11234567899999999999999999999999999999753 5788
Q ss_pred CCCCCCChhhhhcCCcEEEcCCccccccCCCCchh-------hhhhhcCCCeEEeeeCCCCCCcc
Q 010187 449 WQPGALPPALLALDGNVHPIDPSWHVAELGQRSLE-------AHEETLKSAAVLHFSGPAKPWLE 506 (516)
Q Consensus 449 ~DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~~~~-------~~~~~i~~~~IIHy~G~~KPW~~ 506 (516)
+|||+|| .+|.++++.||.+||++...+.... ......++++||||+|+.|||..
T Consensus 187 ~DQd~LN---~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 187 PDQDILN---AVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred CChHHHH---HHHhCCeEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 9999999 5899999999999999864332111 12356789999999999999973
No 15
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.7e-37 Score=318.69 Aligned_cols=246 Identities=20% Similarity=0.245 Sum_probs=184.2
Q ss_pred cceEEEEeCCcch--hHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHH
Q 010187 210 FHHVVLLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVK 287 (516)
Q Consensus 210 ~ihIv~~sDn~la--asVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl 287 (516)
.++||+++|++|+ ++|+|.|++.|++. -.+.|||++|+++. +|+.. +++. +++|.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~----e~~~~--l~~~------~~~f~---------- 58 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNE----EDKKK--LNET------AEPFK---------- 58 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCH----HHHHH--HHHH------HHhhc----------
Confidence 5789999998764 99999999999985 47999999999985 44432 1111 11111
Q ss_pred HHHHHHHHHHHHhhccCcccccccchhhhhhcc-cC-CCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhc
Q 010187 288 EMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLE-VL-SPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLE 365 (516)
Q Consensus 288 ~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~-~~-~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~ 365 (516)
.......++. ..++ .. ..++||.++|+||++|++||+++|+||||+|+||.|||++||+
T Consensus 59 --------------~~i~~~~id~-----~~~~~~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~ 119 (325)
T COG1442 59 --------------SFIVLEVIDI-----EPFLDYPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFF 119 (325)
T ss_pred --------------cceeeEEEec-----hhhhcccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHh
Confidence 0000001110 0111 12 4578999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCC
Q 010187 366 LDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSG 445 (516)
Q Consensus 366 iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~ 445 (516)
+|++++++|||.|...... .+... ..........|||+||+++|++.||++++++++++++++.. +.
T Consensus 120 ~~~~~~~~aaV~D~~~~~~-------~~~~~-----~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~-~~ 186 (325)
T COG1442 120 IDLEEYYLAAVRDVFSHYM-------KEGAL-----RLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE-ND 186 (325)
T ss_pred cCCCcceEEEEeehhhhhh-------hhhhh-----HhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccc-cc
Confidence 9999999999999864210 00000 00011235689999999999999999999999999987765 47
Q ss_pred CCcCCCCCCChhhhhcCCcEEEcCCcccccc-CCCCchh-hhhhhcCCCeEEeeeCCCCCCccCCCCCCC
Q 010187 446 LELWQPGALPPALLALDGNVHPIDPSWHVAE-LGQRSLE-AHEETLKSAAVLHFSGPAKPWLEIGLPEKR 513 (516)
Q Consensus 446 ~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~-lgy~~~~-~~~~~i~~~~IIHy~G~~KPW~~~~~~~yr 513 (516)
+.++|||+|| ++|++++.+||.+||++. ..+.... .......+|.|+||+|+.|||...+.+.+|
T Consensus 187 ~~~~DQdiLN---~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~ 253 (325)
T COG1442 187 LLYPDQDILN---MIFEDRVLELPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYPR 253 (325)
T ss_pred cCCccccHHH---HHHHhhhhccCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCccccccH
Confidence 8999999999 689999999999999984 2221111 013456789999999999999999977765
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=4e-36 Score=292.14 Aligned_cols=246 Identities=27% Similarity=0.484 Sum_probs=164.4
Q ss_pred eEEEEeCCcc--hhHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHHH
Q 010187 212 HVVLLTDNVL--AASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEM 289 (516)
Q Consensus 212 hIv~~sDn~l--aasVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~ 289 (516)
||++++|+.| +++|+++|+++|++++..++|||++|+++.+..+..... .....++..+... .....
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~------~~~~~-- 69 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRAL---AAEVIEIEPIEFP------DISML-- 69 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHH---SCCCCTTECEEET------SGGHH--
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhh---cccccceeeeccc------hHHhh--
Confidence 7999999855 499999999999998788999999999986543322111 0000001010000 00000
Q ss_pred HHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCC
Q 010187 290 LEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLN 369 (516)
Q Consensus 290 l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~ 369 (516)
..+ ........+++..+|+||+++++||+++||||||+|++|.+||++||+++++
T Consensus 70 --------~~~-----------------~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~ 124 (250)
T PF01501_consen 70 --------EEF-----------------QFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQ 124 (250)
T ss_dssp --------H-------------------TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---T
T ss_pred --------hhh-----------------hhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccch
Confidence 000 0112334678999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcC
Q 010187 370 GKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELW 449 (516)
Q Consensus 370 g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~ 449 (516)
|+.+||++|+... ...+...+..........+|||+|||++|+++||++++.+++.++++++.. ...+.
T Consensus 125 ~~~~~a~~~~~~~----------~~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 193 (250)
T PF01501_consen 125 GKYLAAVEDESFD----------NFPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM-KLGFP 193 (250)
T ss_dssp TSSEEEEE----H----------HHHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT-T-SSC
T ss_pred hhhccccccchhh----------hhhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc-ccCcC
Confidence 9999999993211 111111111111233458999999999999999999999999999887653 46789
Q ss_pred CCCCCChhhhhcCCcEEEcCCccccccCCCC-chhhhhhhcCCCeEEeeeCCCCCCccC
Q 010187 450 QPGALPPALLALDGNVHPIDPSWHVAELGQR-SLEAHEETLKSAAVLHFSGPAKPWLEI 507 (516)
Q Consensus 450 DQd~LN~~ll~F~~~~~~L~~~WN~~~lgy~-~~~~~~~~i~~~~IIHy~G~~KPW~~~ 507 (516)
||++|| ++|.+++++||.+||++..++. .........++++||||+|..|||...
T Consensus 194 DQ~~ln---~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 194 DQDILN---IVFYGNIKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HHHHHH---HHHTTGEEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred chHHHh---hhccceeEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 999998 5899999999999999864441 111134566899999999999999875
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=2e-32 Score=278.61 Aligned_cols=245 Identities=16% Similarity=0.208 Sum_probs=158.1
Q ss_pred ceEE-EEeCCcch-hHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHHH
Q 010187 211 HHVV-LLTDNVLA-ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKE 288 (516)
Q Consensus 211 ihIv-~~sDn~la-asVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~ 288 (516)
+|+| +++++.+. +-|+|+|++.|+. ..++|||++|+... .|+.. .++++. ..+.
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~----~~~~~-----------~l~~~~---~~~~---- 56 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLK----QSFKE-----------KLDDWP---ELID---- 56 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccC----HHHHH-----------HHHHHH---Hhcc----
Confidence 4665 45555654 8889999999985 46999999998542 23321 000000 0000
Q ss_pred HHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhcc--
Q 010187 289 MLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLEL-- 366 (516)
Q Consensus 289 ~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~i-- 366 (516)
..+ .+ ....+..|..... .+ ...+++.+|+||++|++||+++||||||+|+||.+||++||++
T Consensus 57 -----~~i---~~---~i~~I~~P~~~~~--~w--s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~ 121 (304)
T cd06430 57 -----RKF---NY---TLHPITFPSGNAA--EW--KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLK 121 (304)
T ss_pred -----cee---ee---EEEEEecCccchh--hh--hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHh
Confidence 000 00 0111112211000 01 1345669999999999999999999999999999999999999
Q ss_pred CCCCC-eEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHH-----------hhHHHHH
Q 010187 367 DLNGK-VVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRR-----------TNITATY 434 (516)
Q Consensus 367 DL~g~-~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~-----------~nit~~~ 434 (516)
|+++. ++|++++..... ...+.... .+| + .+..|||||||+|||++||+ .++++++
T Consensus 122 df~~~~~aA~v~e~~~~~----~~~~~~~~--~~~-----~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~ 189 (304)
T cd06430 122 KFNSTQLAAMAPEHEEPN----IGWYNRFA--RHP-----Y-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEIL 189 (304)
T ss_pred hcCCCeEEEEEecccccc----hhhhhhhc--ccC-----c-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHH
Confidence 99986 555555532110 00111100 111 1 12347999999999999999 7889999
Q ss_pred HHHHHHhccCCCCcCCCCCCChhhhhcCCc---EEEcCCccccccC--CCCchhhhhhhcCCCeEEeeeCCCCCCccCCC
Q 010187 435 HKWLKLNLKSGLELWQPGALPPALLALDGN---VHPIDPSWHVAEL--GQRSLEAHEETLKSAAVLHFSGPAKPWLEIGL 509 (516)
Q Consensus 435 ~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~---~~~L~~~WN~~~l--gy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~ 509 (516)
+++++++. ..+.++|||+||. +|.++ ++.||++||++.. .|...- ...+.+.++|||++++.| .....
T Consensus 190 ~~~~~~~~-~~l~~~DQDiLN~---v~~~~p~~~~~Lp~~wN~~~d~~~y~~~~-~~~~~~~~~~~H~n~~~~--~~~~~ 262 (304)
T cd06430 190 MPLYKKYK-LKITWGDQDLINI---IFHHNPEMLYVFPCHWNYRPDHCMYGSNC-KAAEEEGVFILHGNRGVY--HSDKQ 262 (304)
T ss_pred HHHHHhcc-cCCCCCCHHHHHH---HHcCCCCeEEEcCccccCCccceeecccc-cccccccceEEEcCCCCC--CCccc
Confidence 99999875 3688999999994 78877 9999999998752 222211 123456899999998766 34444
Q ss_pred CCCC
Q 010187 510 PEKR 513 (516)
Q Consensus 510 ~~yr 513 (516)
|-||
T Consensus 263 ~~f~ 266 (304)
T cd06430 263 PAFR 266 (304)
T ss_pred hHHH
Confidence 4333
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.98 E-value=3.8e-32 Score=271.12 Aligned_cols=232 Identities=14% Similarity=0.233 Sum_probs=152.5
Q ss_pred ceEEE-EeCCcch--hHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccchhHH
Q 010187 211 HHVVL-LTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVK 287 (516)
Q Consensus 211 ihIv~-~sDn~la--asVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl 287 (516)
+||+. ++|+.++ ++|++.|+++|+. .++.|||++|+++.+.. ..+.
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~-~~l~---------------------------- 49 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFK-EFLP---------------------------- 49 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHH-HHHH----------------------------
Confidence 45543 4555553 9999999999985 57999999999985321 1110
Q ss_pred HHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccC-CCCeEEEEecCeeeccCchHHhcc
Q 010187 288 EMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFP-DLNKILFLDDDVVVQHDLSSLLEL 366 (516)
Q Consensus 288 ~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP-~ldKVLYLD~DvVV~~DLseLw~i 366 (516)
+ +...|.....++.++.|..+.. . .....+..+|.|++++++|| +++||||||+|+||.+||++||++
T Consensus 50 -~------~~~~~~~~i~~i~i~~~~~~~~-~---~~~~~~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~ 118 (248)
T cd06432 50 -E------MAKEYGFEYELVTYKWPRWLHK-Q---TEKQRIIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDM 118 (248)
T ss_pred -H------HHHHhCCceEEEEecChhhhhc-c---cccchhHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhc
Confidence 0 0111111111112211111110 0 00111356789999999999 699999999999999999999999
Q ss_pred CCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHH---Hhcc
Q 010187 367 DLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLK---LNLK 443 (516)
Q Consensus 367 DL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~---~~~~ 443 (516)
||+|+++|||+||...... ...++. +.++. ..++ .+..|||||||||||++||++++++++.++++ ++.
T Consensus 119 dl~~~~~Aav~d~~~~~~~-~~~~~~-~~~~~----~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~- 190 (248)
T cd06432 119 DLKGAPYGYTPFCDSRKEM-DGFRFW-KQGYW----KSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDP- 190 (248)
T ss_pred CcCCCeEEEeeccccchhc-ccchhh-hhhhh----hhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCC-
Confidence 9999999999998642100 000110 00100 0112 24569999999999999999999997766554 332
Q ss_pred CCCCcCCCCCCChhhhhcCCc-EEEcCCccccccCCCCchhhhhhhcCCCeEEeeeCC
Q 010187 444 SGLELWQPGALPPALLALDGN-VHPIDPSWHVAELGQRSLEAHEETLKSAAVLHFSGP 500 (516)
Q Consensus 444 ~~~~~~DQd~LN~~ll~F~~~-~~~L~~~WN~~~lgy~~~~~~~~~i~~~~IIHy~G~ 500 (516)
..+.++|||+||. ++.+. +++||.+||++. ++- ..+..+.|.+|||..+
T Consensus 191 ~~l~~~DQDiLN~---v~~~~~i~~Lp~~w~~~~-~~~----~~~~~~~~~~~~~~~~ 240 (248)
T cd06432 191 NSLANLDQDLPNN---MQHQVPIFSLPQEWLWCE-TWC----SDESKKKAKTIDLCNN 240 (248)
T ss_pred CccccCCchhhHH---HhccCCeEECChHHHHHH-HHh----cccccCccceeecccC
Confidence 2478899999995 67675 999999999973 221 1233678999999874
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.92 E-value=1e-24 Score=216.29 Aligned_cols=145 Identities=17% Similarity=0.142 Sum_probs=113.5
Q ss_pred ccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCC
Q 010187 326 CLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSN 405 (516)
Q Consensus 326 ~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~ 405 (516)
+++..+|.|++++++. +++||||||+|++|.+||++||++ +..++|+.|+..
T Consensus 73 ~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~~------------------------ 124 (240)
T cd02537 73 PRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCGW------------------------ 124 (240)
T ss_pred hHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccCc------------------------
Confidence 4677889999999975 699999999999999999999987 677888877531
Q ss_pred CCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCc--EEEcCCccccccCCCCchh
Q 010187 406 FDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGN--VHPIDPSWHVAELGQRSLE 483 (516)
Q Consensus 406 ~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~--~~~L~~~WN~~~lgy~~~~ 483 (516)
..|||||||++|++. ++.+++.+++.+.. ....+|||+|| .+|.++ ++.||.+||++...+....
T Consensus 125 ----~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~--~~~~~DQdiLN---~~~~~~~~~~~l~~~yN~~~~~~~~~~ 191 (240)
T cd02537 125 ----PDLFNSGVFVLKPSE----ETFNDLLDALQDTP--SFDGGDQGLLN---SYFSDRGIWKRLPFTYNALKPLRYLHP 191 (240)
T ss_pred ----cccccceEEEEcCCH----HHHHHHHHHHhccC--CCCCCCHHHHH---HHHcCCCCEeECCcceeeehhhhccCc
Confidence 248999999999964 45667777777653 26778999999 479999 9999999999843222111
Q ss_pred hhhhhcCCCeEEeeeCCCCCCccCCCCC
Q 010187 484 AHEETLKSAAVLHFSGPAKPWLEIGLPE 511 (516)
Q Consensus 484 ~~~~~i~~~~IIHy~G~~KPW~~~~~~~ 511 (516)
......++|+||||+|+.|||.....++
T Consensus 192 ~~~~~~~~~~iiHf~g~~KPW~~~~~~~ 219 (240)
T cd02537 192 EALWFGDEIKVVHFIGGDKPWSWWRDPE 219 (240)
T ss_pred hhhcccCCcEEEEEeCCCCCCCCCcCCC
Confidence 0023457899999999999998776653
No 20
>PLN00176 galactinol synthase
Probab=99.91 E-value=7.2e-24 Score=218.86 Aligned_cols=164 Identities=21% Similarity=0.334 Sum_probs=116.6
Q ss_pred hhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccc--------cccccCCc
Q 010187 329 LMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYK--------DYLNFSYP 400 (516)
Q Consensus 329 ~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~--------~~Lnfs~P 400 (516)
..+|.||.++++. +++||||||+|+||.+||++||+++ +..+|||.||.+...+....++. ..+++ |
T Consensus 99 ~i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p 173 (333)
T PLN00176 99 VINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--P 173 (333)
T ss_pred hhhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--h
Confidence 3467899999977 6999999999999999999999884 34689999998753211111110 01111 1
Q ss_pred cccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCcEEEcCCcccccc-CCC
Q 010187 401 IISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVAE-LGQ 479 (516)
Q Consensus 401 ~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~~-lgy 479 (516)
.. .+ .+...||||||||||++.|+.+++. ++++.+. ...++|||+|| ..|.++|++||.+||++. +-+
T Consensus 174 ~~-~g-~~~~~yFNSGVlvinps~~~~~~ll----~~l~~~~--~~~f~DQD~LN---~~F~~~~~~Lp~~YN~~~~~~~ 242 (333)
T PLN00176 174 AE-LG-PPPPLYFNAGMFVFEPSLSTYEDLL----ETLKITP--PTPFAEQDFLN---MFFRDIYKPIPPVYNLVLAMLW 242 (333)
T ss_pred hh-cc-CCCCCeEEeEEEEEEcCHHHHHHHH----HHHHhcC--CCCCCCHHHHH---HHHcCcEEECCchhcCchhhhh
Confidence 10 01 1246799999999999999987665 4555543 35789999999 589999999999999973 323
Q ss_pred CchhhhhhhcCCCeEEeeeC-CCCCCccCCCC
Q 010187 480 RSLEAHEETLKSAAVLHFSG-PAKPWLEIGLP 510 (516)
Q Consensus 480 ~~~~~~~~~i~~~~IIHy~G-~~KPW~~~~~~ 510 (516)
.... ....++++||||+| ..|||+..+..
T Consensus 243 ~~~~--~~~~~~vkIIHY~~~~~KPW~~~~~~ 272 (333)
T PLN00176 243 RHPE--NVELDKVKVVHYCAAGSKPWRYTGKE 272 (333)
T ss_pred hChh--hcccCCcEEEEeeCCCCCCCCCCCcc
Confidence 2211 12256899999997 57999876543
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.77 E-value=2.9e-19 Score=180.85 Aligned_cols=145 Identities=14% Similarity=0.169 Sum_probs=110.5
Q ss_pred CccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccC
Q 010187 325 SCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISS 404 (516)
Q Consensus 325 ~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~ 404 (516)
+.|+. +|.||.++++ ++++||||||+|++|.++|++||+++.. ..+||+.. .
T Consensus 75 ~~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~~-~------------------------ 126 (278)
T cd06914 75 AYWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPRA-Y------------------------ 126 (278)
T ss_pred ccHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcc-cceeeecC-c------------------------
Confidence 35655 4999999999 6899999999999999999999998733 33454321 0
Q ss_pred CCCCCCcccccceeeeehHHHHHhhHHHHHHHHHHHhccCCCCcCCCCCCChhhhhcCCc-------EEEcCCc-ccccc
Q 010187 405 NFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPGALPPALLALDGN-------VHPIDPS-WHVAE 476 (516)
Q Consensus 405 ~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~~~~~~~DQd~LN~~ll~F~~~-------~~~L~~~-WN~~~ 476 (516)
.||||||||||++.|+.+++++++.+..... ...+|||+|| ..|.|. +..||.+ ||++.
T Consensus 127 ------~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~----~~~~DQdiLN---~~~~~~~~~~~~~~~~Lp~~~y~llt 193 (278)
T cd06914 127 ------WKFASHLMVIKPSKEAFKELMTEILPAYLNK----KNEYDMDLIN---EEFYNSKQLFKPSVLVLPHRQYGLLT 193 (278)
T ss_pred ------ceecceeEEEeCCHHHHHHHHHHHHHhcccC----CCCCChHHHH---HHHhCCccccCcceEEcCccccccCC
Confidence 1799999999999999999999888765432 3578999999 579999 9999997 99874
Q ss_pred CCCCch-------------h-h-hhhhcCCCeEEeeeCC--CCCCccCCCC
Q 010187 477 LGQRSL-------------E-A-HEETLKSAAVLHFSGP--AKPWLEIGLP 510 (516)
Q Consensus 477 lgy~~~-------------~-~-~~~~i~~~~IIHy~G~--~KPW~~~~~~ 510 (516)
--+... + . ..+..+++++|||++. .|||......
T Consensus 194 ~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~~~ 244 (278)
T cd06914 194 GEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNNLE 244 (278)
T ss_pred hhhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcCHH
Confidence 211110 0 0 1234478999999986 6999886543
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.04 E-value=5.1e-10 Score=128.67 Aligned_cols=217 Identities=13% Similarity=0.252 Sum_probs=142.4
Q ss_pred CCCcceEEE-EeCCcch--hHHHHHHHHhhcCCCCceEEEEEeCCCCcccchhhhhhcccccchhhhccccccccccccc
Q 010187 207 DPSFHHVVL-LTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVN 283 (516)
Q Consensus 207 d~~~ihIv~-~sDn~la--asVvI~Siv~Ns~~p~~ivFHIitD~~~~~am~~wf~~n~~~~a~v~v~ni~~F~wl~~~~ 283 (516)
|.++|||.- +|.+-|- +-++|.|+++|++.| +-|.++-.-++ +. |. +.
T Consensus 1178 ~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLS--------------Pt---------FK----e~ 1228 (1470)
T KOG1879|consen 1178 DKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLS--------------PT---------FK----ES 1228 (1470)
T ss_pred ccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcC--------------hH---------HH----HH
Confidence 555899874 4444453 889999999999986 66665554433 31 11 11
Q ss_pred hhHHHHHHHHHHHHHHhhccCcccccccchhhhhhcccCCCCccchhhHHHHhhccccC-CCCeEEEEecCeeeccCchH
Q 010187 284 VGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFP-DLNKILFLDDDVVVQHDLSS 362 (516)
Q Consensus 284 ~~vl~~l~~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~~S~~~y~Rf~LPellP-~ldKVLYLD~DvVV~~DLse 362 (516)
+| .+...|.......+-..|+.++.+-+..+ -+..|==+|+.-+|| +++||||.|+|-||+.||.|
T Consensus 1229 iP---------~mA~eYnFeyElv~YkWPrWLhqQ~EKQR----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~E 1295 (1470)
T KOG1879|consen 1229 IP---------HMAKEYNFEYELVQYKWPRWLHQQTEKQR----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKE 1295 (1470)
T ss_pred HH---------HHHHHhCceEEEEEecCchhhhhhhhhhh----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHH
Confidence 22 23445543333333356665554333211 234455568888899 99999999999999999999
Q ss_pred HhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCcccccceeeeehHHHHHhhHHHHHHHHH---H
Q 010187 363 LLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWL---K 439 (516)
Q Consensus 363 Lw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~~~~~~l---~ 439 (516)
|.++|++|.+.|-++-|..+. ....|=-|+.-+++..+ .+..|--|...|+||++.|+-.-..++.-.. .
T Consensus 1296 L~dfdl~GaPygYtPfCdsR~------EMDGyRFWK~GYW~~hL-~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS 1368 (1470)
T KOG1879|consen 1296 LMDFDLGGAPYGYTPFCDSRR------EMDGYRFWKQGYWKKHL-RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALS 1368 (1470)
T ss_pred HHhcccCCCccccCccccccc------cccchhHHhhhHHHHHh-ccCccccceeeeeeHHHHHhcccchHHHHHHHhhc
Confidence 999999999999999998652 11111112222222211 2467888999999999999977666654332 2
Q ss_pred HhccCCCCcCCCCCCChhhhhcCCcEEEcCCccccc
Q 010187 440 LNLKSGLELWQPGALPPALLALDGNVHPIDPSWHVA 475 (516)
Q Consensus 440 ~~~~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~ 475 (516)
+.++ .+.--|||.=|. +...-.++.||..|=++
T Consensus 1369 ~DPN-SLsNLDQDLPNn--m~hqVpIkSLPqeWLWC 1401 (1470)
T KOG1879|consen 1369 QDPN-SLSNLDQDLPNN--MQHQVPIKSLPQEWLWC 1401 (1470)
T ss_pred CCcc-hhhhcccccccc--ceeecccccCCcchhhh
Confidence 3333 355569998775 45667889999998775
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.92 E-value=3.5e-06 Score=85.69 Aligned_cols=158 Identities=17% Similarity=0.206 Sum_probs=85.5
Q ss_pred hhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCc--------------------
Q 010187 330 MNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGR-------------------- 389 (516)
Q Consensus 330 ~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~-------------------- 389 (516)
.++.++.+-+.. ++|||+|||+|.||.+++++||+.. -+-.+|..|...... .++
T Consensus 155 ~mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~--~fhrp~~~i~~~ft~~faayg~~ 229 (368)
T COG5597 155 DMFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPA--DFHRPNSGIFVSFTPAFAAYGKM 229 (368)
T ss_pred HHhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHH--HhcCCCCccceeecHHHHhhccc
Confidence 456677776766 6999999999999999999999865 344555555432210 000
Q ss_pred ---cccccccc--CCccccCCCCC-CCcccccceeeeehHHHHHhhHHHHHHHHHHHhcc--CCCCcCCCCCCChhhhhc
Q 010187 390 ---KYKDYLNF--SYPIISSNFDH-DHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLK--SGLELWQPGALPPALLAL 461 (516)
Q Consensus 390 ---~~~~~Lnf--s~P~i~~~~d~-~~~yfNsGVmLiNL~~WR~~nit~~~~~~l~~~~~--~~~~~~DQd~LN~~ll~F 461 (516)
-|.-|+++ .++.+.+.+.| -.-+||||.|+++..+.--..+.. + . .++ .+..+-.|..+|.... .
T Consensus 230 r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~----~-a-lPklydda~mmeqsllnlaYn-~ 302 (368)
T COG5597 230 RAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVW----F-A-LPKLYDDADMMEQSLLNLAYN-Y 302 (368)
T ss_pred HhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHH----H-h-hHHhhhhhhHHHHHHHHHHHh-h
Confidence 01122322 11222223333 367999999999998765433322 1 1 111 0122334666663211 1
Q ss_pred CC--cEEEcCCccccccCCCCchhhhhhhcCCCeEEeeeCCCCCCccCCCC
Q 010187 462 DG--NVHPIDPSWHVAELGQRSLEAHEETLKSAAVLHFSGPAKPWLEIGLP 510 (516)
Q Consensus 462 ~~--~~~~L~~~WN~~~lgy~~~~~~~~~i~~~~IIHy~G~~KPW~~~~~~ 510 (516)
.+ -|..++.+|| ||-. ...++--.+-+|+ |||...|..
T Consensus 303 ~g~FPwerld~~yN----G~wa---~~ndlPylka~Hg----K~W~y~g~~ 342 (368)
T COG5597 303 EGFFPWERLDPRYN----GYWA---DANDLPYLKAWHG----KPWFYTGEQ 342 (368)
T ss_pred hccCchhhcCcccc----cccc---cccccchHHHhhc----CcCCCCccc
Confidence 12 3556677777 3321 1112222234565 999887765
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=96.45 E-value=0.0068 Score=58.67 Aligned_cols=144 Identities=17% Similarity=0.119 Sum_probs=78.7
Q ss_pred chhhHHHH-hhccccCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCC
Q 010187 328 SLMNHLRI-YIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNF 406 (516)
Q Consensus 328 S~~~y~Rf-~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~ 406 (516)
..+...|. ++-+++..=--|+|+|+|++..+|..++++ -.+.-+.+..|+..... .
T Consensus 49 ~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~--~~~~Di~~~~d~~~~~~---------------------~ 105 (212)
T PF03407_consen 49 QKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFE--NPDADILFSSDGWDGTN---------------------S 105 (212)
T ss_pred HHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhc--cCCCceEEecCCCcccc---------------------h
Confidence 33444554 334555532469999999999999999992 13444444445542100 0
Q ss_pred CCCCcccccceeeeehHHHHHhhHHHH-HHHHHHHhccCCCCcCCCCCCChhhhhc-----CCcEEEcCCccccccCCC-
Q 010187 407 DHDHCAWLYGMNVLDLEAWRRTNITAT-YHKWLKLNLKSGLELWQPGALPPALLAL-----DGNVHPIDPSWHVAELGQ- 479 (516)
Q Consensus 407 d~~~~yfNsGVmLiNL~~WR~~nit~~-~~~~l~~~~~~~~~~~DQd~LN~~ll~F-----~~~~~~L~~~WN~~~lgy- 479 (516)
......+|+|++.+--.. -+.+ +.+|.+.... ....+||.++|.++..- .-++..||..--..|.+|
T Consensus 106 ~~~~~~~n~G~~~~r~t~-----~~~~~~~~w~~~~~~-~~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f 179 (212)
T PF03407_consen 106 DRNGNLVNTGFYYFRPTP-----RTIAFLEDWLERMAE-SPGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYF 179 (212)
T ss_pred hhcCCccccceEEEecCH-----HHHHHHHHHHHHHHh-CCCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccce
Confidence 011223599999985433 3333 3344443322 23457999999765432 224567776554434332
Q ss_pred Cchhhhhhh--cCCCeEEeeeCC
Q 010187 480 RSLEAHEET--LKSAAVLHFSGP 500 (516)
Q Consensus 480 ~~~~~~~~~--i~~~~IIHy~G~ 500 (516)
......... ...|.+||.++.
T Consensus 180 ~~~~~~~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 180 CQSRDWAWVPTKNKPYIVHANCC 202 (212)
T ss_pred eecchhhhhccccccceEEEcCC
Confidence 110101111 458999999974
No 25
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=88.76 E-value=0.79 Score=49.29 Aligned_cols=159 Identities=18% Similarity=0.174 Sum_probs=83.6
Q ss_pred CCccchhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhccCCCCC--eEEEEecCCCCCCCCCCcccccccccCCcc
Q 010187 324 PSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGK--VVGAVVGSSCGDNCCPGRKYKDYLNFSYPI 401 (516)
Q Consensus 324 ~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~--~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~ 401 (516)
+..|+...++|=.+- -.|+.+-+.|||+|.+|..-- +++.++.+ .+-.+ +.+...+
T Consensus 179 p~~WaKlpaLR~aM~-~~PeaEWiWWLDsDALImNms---felPlery~~~NlVi------------hg~~~~l------ 236 (429)
T PLN03182 179 AGFWAKLPLLRKLML-AHPEVEWIWWMDSDALFTDMT---FEIPLEKYEGYNLVI------------HGWDELV------ 236 (429)
T ss_pred CcchhHHHHHHHHHH-HCCCceEEEEecCCceeecCC---CCCCHhHcCCcCeee------------ccchhhh------
Confidence 456777777775553 368999999999999998631 11222211 00000 0111111
Q ss_pred ccCCCCCCCcccccceeeeehHHHHHhhHHH------------HHHHHHHHhcc--CCCCcCCCCCCChhhhhcCCcE--
Q 010187 402 ISSNFDHDHCAWLYGMNVLDLEAWRRTNITA------------TYHKWLKLNLK--SGLELWQPGALPPALLALDGNV-- 465 (516)
Q Consensus 402 i~~~~d~~~~yfNsGVmLiNL~~WR~~nit~------------~~~~~l~~~~~--~~~~~~DQd~LN~~ll~F~~~~-- 465 (516)
-...+-.+.|+|+++|-.-.|--.=+.. +.-+.+..... ..+..-||.+|-..|+.-..+|
T Consensus 237 ---~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~ 313 (429)
T PLN03182 237 ---YDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGD 313 (429)
T ss_pred ---eeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhcc
Confidence 0123456889999999877776432211 01111111110 1234568888765544443333
Q ss_pred -EEcCCccccccC------CCCchh--h--hhhhcCCCeEEeeeCCCCCCccCC
Q 010187 466 -HPIDPSWHVAEL------GQRSLE--A--HEETLKSAAVLHFSGPAKPWLEIG 508 (516)
Q Consensus 466 -~~L~~~WN~~~l------gy~~~~--~--~~~~i~~~~IIHy~G~~KPW~~~~ 508 (516)
..|...|-+.|. .|+... + ....-+-|-|.||+| .||-...+
T Consensus 314 kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~ 366 (429)
T PLN03182 314 KVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYG 366 (429)
T ss_pred ceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCC
Confidence 456667666642 111100 0 112335789999999 89985544
No 26
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=82.39 E-value=0.83 Score=45.79 Aligned_cols=150 Identities=19% Similarity=0.200 Sum_probs=12.6
Q ss_pred cCCCCeEEEEecCeeeccCchHHhccCCCCCeEE--EEecCCCCCCCCCCcccccccccCCcc-ccCCCCCCCcccccce
Q 010187 341 FPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVG--AVVGSSCGDNCCPGRKYKDYLNFSYPI-ISSNFDHDHCAWLYGM 417 (516)
Q Consensus 341 lP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~ia--AV~d~~~~~~~~~~~~~~~~Lnfs~P~-i~~~~d~~~~yfNsGV 417 (516)
+|+.+-|+|||+|.+|..-=-+|-+.=|+...+- ...|.... +...+.+..+..++. +..-...+..++|+|+
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~----p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGs 149 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIV----PPDSIIKTYSVIDGNDIHLIITQDWNGLNTGS 149 (239)
T ss_dssp -TT-SEEEEE-TTEEE----------------------------------------------------------------
T ss_pred CCCCCEEEEEcCCeEEEecccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence 3889999999999999865444433212111100 00111000 000111111111111 0011234677899999
Q ss_pred eeeehHHHHHhhHHHHHHHHHHHhccCC-CCcCCCCCCChhhh---hcCCcEEEcCCcc-ccccCCCCchhhhhhhcCCC
Q 010187 418 NVLDLEAWRRTNITATYHKWLKLNLKSG-LELWQPGALPPALL---ALDGNVHPIDPSW-HVAELGQRSLEAHEETLKSA 492 (516)
Q Consensus 418 mLiNL~~WR~~nit~~~~~~l~~~~~~~-~~~~DQd~LN~~ll---~F~~~~~~L~~~W-N~~~lgy~~~~~~~~~i~~~ 492 (516)
+++--..|-+. +.+.+.+......+.. ....||++|-.++. .+.+++..+|.+| |. |..........+..
T Consensus 150 FliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~ns----y~~~~~~~~~~~GD 224 (239)
T PF05637_consen 150 FLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNS----YPEDECNYQYKEGD 224 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccc
Confidence 99977777653 2233322222211111 23568998864331 1234444555443 22 11110011233456
Q ss_pred eEEeeeC
Q 010187 493 AVLHFSG 499 (516)
Q Consensus 493 ~IIHy~G 499 (516)
-|+||.|
T Consensus 225 fvvhfaG 231 (239)
T PF05637_consen 225 FVVHFAG 231 (239)
T ss_dssp -------
T ss_pred ccccccc
Confidence 7999999
No 27
>PLN02769 Probable galacturonosyltransferase
Probab=81.93 E-value=9.6 Score=43.37 Aligned_cols=76 Identities=9% Similarity=0.066 Sum_probs=60.1
Q ss_pred CCCcchHHHHHHHHHHHHhhc--CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 010187 85 GSDTSLKLREELTRALIEAKD--GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESI 162 (516)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~ 162 (516)
...++..+.+|++..++|..+ ||...+++ +|.++.+.+++|.+..++++.+.---.+|...+-.-++..-.|..+
T Consensus 202 k~~~~~~l~~el~~~i~e~~~~l~~~~~d~d---lp~~~~~~~~~m~~~~~~ak~~~~dc~~~~~klr~~l~~~E~~~~~ 278 (629)
T PLN02769 202 KLPGQEKLTRELKQNIQEHERVLSESITDAD---LPPFIQKKLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHF 278 (629)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHhhcccccc---CChhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Confidence 345667788999999999875 68777777 8999999999999999999988877777777776666666666555
Q ss_pred H
Q 010187 163 Y 163 (516)
Q Consensus 163 ~ 163 (516)
.
T Consensus 279 ~ 279 (629)
T PLN02769 279 H 279 (629)
T ss_pred H
Confidence 3
No 28
>PLN03181 glycosyltransferase; Provisional
Probab=79.56 E-value=4.5 Score=43.80 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=26.2
Q ss_pred CCccchhhHHHHhhccccCCCCeEEEEecCeeeccC
Q 010187 324 PSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHD 359 (516)
Q Consensus 324 ~~~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~D 359 (516)
+..|+..-..|=.+- -+|+.+.+-|||.|++|...
T Consensus 180 p~~WaKipalRaAM~-a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAML-AHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHHH-HCCCceEEEEecCCceeecC
Confidence 456666666664332 28899999999999999865
No 29
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=69.72 E-value=4.1 Score=43.32 Aligned_cols=154 Identities=14% Similarity=0.020 Sum_probs=77.0
Q ss_pred cCCCCeEEEEecCeeeccCchHHhccCCCCCeEEEEecCCCCCCCCCCccccc-ccccCCcc-----ccCCCCC--CCcc
Q 010187 341 FPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKD-YLNFSYPI-----ISSNFDH--DHCA 412 (516)
Q Consensus 341 lP~ldKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~-~Lnfs~P~-----i~~~~d~--~~~y 412 (516)
|.++++.+|+|+|+-+..++...+++-.. .-.+...+.........-.+.. +....++. ...-++. ..+.
T Consensus 122 ~~~~~a~i~~~~~i~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~ 199 (369)
T KOG1950|consen 122 LIEDGAAIYLVDDIQRFRNDDANFDVPNE--LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLI 199 (369)
T ss_pred eeccCceEEEecchhhccCccccccccch--hcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccce
Confidence 45789999999999999999988876322 2223333332110000001111 11111110 0111222 3556
Q ss_pred cccceeeeehHHHHHhhHHHHHHHHHHHhc-cCCCCcCCCCCCChhhhhcCCcEEEcCCccccc-cCCCCch-h--hhhh
Q 010187 413 WLYGMNVLDLEAWRRTNITATYHKWLKLNL-KSGLELWQPGALPPALLALDGNVHPIDPSWHVA-ELGQRSL-E--AHEE 487 (516)
Q Consensus 413 fNsGVmLiNL~~WR~~nit~~~~~~l~~~~-~~~~~~~DQd~LN~~ll~F~~~~~~L~~~WN~~-~lgy~~~-~--~~~~ 487 (516)
||+|++++-.... .+..++.... ......++||.+|. .|.....+.++..|.. +..+... . ....
T Consensus 200 ~n~~~~v~~ps~~-------~~~~~~~~~~~~~~~~~~~q~~l~~---~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~ 269 (369)
T KOG1950|consen 200 FNSGLLVFEPSLC-------NYKDLMEFSEEFESYNGADQGFLHL---IFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRA 269 (369)
T ss_pred eccCccccCCCcc-------chhhHHHhhcccCCCCCccchhhHH---HhhcccCCCcccccccccccccCccccchhhc
Confidence 9999999855432 2222333221 12346789999984 4544333778878875 2222211 1 0111
Q ss_pred hcCCCeEEeeeCCCCCCcc
Q 010187 488 TLKSAAVLHFSGPAKPWLE 506 (516)
Q Consensus 488 ~i~~~~IIHy~G~~KPW~~ 506 (516)
....-...||.|..|||..
T Consensus 270 ~~~~~~~~~y~~~~~p~~~ 288 (369)
T KOG1950|consen 270 SSVLRYALHYLGANKPELC 288 (369)
T ss_pred ccccchhhhccccCCCCcc
Confidence 1122234599998677644
No 30
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=69.44 E-value=1e+02 Score=31.72 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=69.7
Q ss_pred ccCCCCeEEEEecCeeeccCch-HHhccCCCCCeEEEEecCCCCCCCCCCcccccccccCCccccCCCCCCCccccccee
Q 010187 340 LFPDLNKILFLDDDVVVQHDLS-SLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMN 418 (516)
Q Consensus 340 llP~ldKVLYLD~DvVV~~DLs-eLw~iDL~g~~iaAV~d~~~~~~~~~~~~~~~~Lnfs~P~i~~~~d~~~~yfNsGVm 418 (516)
++.+.|-+.++|+|+++++++. |.. |..+|...-......+. .-.|.+.-. |...| .++.+.-|+.+|++
T Consensus 120 ~~~e~DYlF~~dvd~~F~~~ig~E~L-----g~lva~lHp~~y~~~~~-~fpYERrp~-S~AyI--p~~eGdfYy~Ga~~ 190 (271)
T cd02515 120 IGHEVDYLFCMDVDMVFQGPFGVETL-----GDSVAQLHPWWYGKPRK-QFPYERRPS-SAAYI--PEGEGDFYYHGAVF 190 (271)
T ss_pred hcccCCEEEEeeCCceEeecCCHHHh-----hhhheecChhhhcCCCC-CCCCcCCCC-ccccc--cCCCCCeEEeeeec
Confidence 4558999999999999999987 222 23344433221110000 000111000 11112 24456778888877
Q ss_pred eeehHHHHHhhHHHHHHHHHHHhccCCC--CcCCCCCCChhhhhcCCc-EEEcCCcccccc
Q 010187 419 VLDLEAWRRTNITATYHKWLKLNLKSGL--ELWQPGALPPALLALDGN-VHPIDPSWHVAE 476 (516)
Q Consensus 419 LiNL~~WR~~nit~~~~~~l~~~~~~~~--~~~DQd~LN~~ll~F~~~-~~~L~~~WN~~~ 476 (516)
==-.++..+ +++.|..-+......+. ...|-.-||-. .+.++ ++.|++.|....
T Consensus 191 GG~~~~vl~--l~~~c~~~i~~D~~n~I~A~wHDESHLNkY--f~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 191 GGSVEEVYR--LTRACHEGILADKANGIEARWHDESHLNKY--FLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred CccHHHHHH--HHHHHHHHHHHHHhCCceEEeecHhHhHHH--HhhCCCCeecChhhcCCc
Confidence 444444333 56667666655443334 46688889975 34444 899999988864
No 31
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=66.34 E-value=30 Score=35.55 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=29.4
Q ss_pred CCCCCCcceEEEEeCC-cch--hHHHHHHHHhhcCCCCceEEEEEeCC
Q 010187 204 HLTDPSFHHVVLLTDN-VLA--ASVVVSSTVQNSARPEKLVFHIVTDK 248 (516)
Q Consensus 204 ~l~d~~~ihIv~~sDn-~la--asVvI~Siv~Ns~~p~~ivFHIitD~ 248 (516)
..+++..|+++-.... ..+ +-.+|+|+-+++. ...++|+|++
T Consensus 41 ~~~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~---~~~Vi~lt~~ 85 (276)
T PF05704_consen 41 PETNEKIIWVCWWQGEENAPEIVKKCINSWRKNAP---DYEVILLTED 85 (276)
T ss_pred cCCCCCcEEEEECCCccccCHHHHHHHHHHHHHCC---CCeEEEEChH
Confidence 4446666888876533 334 5669999999995 3788888843
No 32
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=64.07 E-value=3.4 Score=44.24 Aligned_cols=33 Identities=30% Similarity=0.428 Sum_probs=23.6
Q ss_pred hhhHHHHhhccccCCCCeEEEEecCeeeccCchHHhc
Q 010187 329 LMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLE 365 (516)
Q Consensus 329 ~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~ 365 (516)
..+..|+.+=-=+ . =||||+|+||.++++.|=+
T Consensus 227 lSdl~RLA~LyKY---G-GvYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 227 LSDLSRLALLYKY---G-GVYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHHHHHHh---C-CEEeeccEEEecccccccc
Confidence 4556777552222 2 2899999999999999864
No 33
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=63.70 E-value=4.5 Score=41.21 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=28.0
Q ss_pred HHhhccccCCCCeEEEEecCeeeccCchHHhccC
Q 010187 334 RIYIPELFPDLNKILFLDDDVVVQHDLSSLLELD 367 (516)
Q Consensus 334 Rf~LPellP~ldKVLYLD~DvVV~~DLseLw~iD 367 (516)
.=.+.-++-..+.||+||+|.|...|++.||+.+
T Consensus 81 ~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 81 NKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred hhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 3344456778899999999999999999999853
No 34
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=40.96 E-value=14 Score=31.67 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=27.3
Q ss_pred ccchhhHHHHhhccccCCCCeEEEEecCeeeccCc-hHHh
Q 010187 326 CLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDL-SSLL 364 (516)
Q Consensus 326 ~~S~~~y~Rf~LPellP~ldKVLYLD~DvVV~~DL-seLw 364 (516)
+...+.++|+.+--.... ||+|.|+++.+++ +.+-
T Consensus 62 ~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 62 YAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred hHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhhh
Confidence 345678899988665554 8999999999999 6543
No 35
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=39.09 E-value=1.5e+02 Score=26.81 Aligned_cols=25 Identities=8% Similarity=0.218 Sum_probs=15.8
Q ss_pred cccccCCCcchHHHHHHHHHHHHhh
Q 010187 80 RRIFSGSDTSLKLREELTRALIEAK 104 (516)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (516)
.+.|..+++.....+++.+.+.+++
T Consensus 73 ~~~~~~~~~~~~~l~~~~~~~~~~e 97 (121)
T TIGR02978 73 SKPWQAGQSPRQALREVKREFRDLE 97 (121)
T ss_pred hhhhhcCCCHHHHHHHHHHHHHHHH
Confidence 3456666666667777766666654
No 36
>PLN02718 Probable galacturonosyltransferase
Probab=33.43 E-value=1.1e+02 Score=35.08 Aligned_cols=73 Identities=12% Similarity=0.052 Sum_probs=54.9
Q ss_pred CcchHHHHHHHHHHHHhhc--CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 010187 87 DTSLKLREELTRALIEAKD--GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESI 162 (516)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~~~~ 162 (516)
.++..+.+|++..++|..+ |+...+++ .|.++++.+++|....+-++.+---.+++...+-.-+...-.|..+
T Consensus 187 ~~~~~~~~el~~~i~e~~~~l~~~~~d~~---lp~~~~~~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~ 261 (603)
T PLN02718 187 GSNSQLVKELRLRTKELERAVGDATKDKD---LSKSALQRMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRA 261 (603)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhcccCCCC---CCHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3566799999999999875 67787777 8999999999999887777766666666666666555555555444
No 37
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=32.93 E-value=26 Score=34.85 Aligned_cols=24 Identities=29% Similarity=0.649 Sum_probs=20.2
Q ss_pred hhccccCCCCeEEEEecCeeeccC
Q 010187 336 YIPELFPDLNKILFLDDDVVVQHD 359 (516)
Q Consensus 336 ~LPellP~ldKVLYLD~DvVV~~D 359 (516)
.+..+||+++-||+||+||.|...
T Consensus 34 vva~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 34 VVAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHHhccCCEEEEEcCCceeecC
Confidence 456788999999999999988754
No 38
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=32.61 E-value=1.6e+02 Score=31.26 Aligned_cols=40 Identities=18% Similarity=0.382 Sum_probs=31.5
Q ss_pred CccchhhHHHHhhccccC--CCCeEEEEecCeeeccCchHHh
Q 010187 325 SCLSLMNHLRIYIPELFP--DLNKILFLDDDVVVQHDLSSLL 364 (516)
Q Consensus 325 ~~~S~~~y~Rf~LPellP--~ldKVLYLD~DvVV~~DLseLw 364 (516)
.|..++.|++.-+-.+|- ++++||+||+|+++.-|.-+.+
T Consensus 77 ~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 77 GYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 356677788887777775 4899999999999999965444
No 39
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=32.26 E-value=1.5e+02 Score=32.65 Aligned_cols=41 Identities=15% Similarity=0.430 Sum_probs=32.7
Q ss_pred CccchhhHHHHhhccccC--CCCeEEEEecCeeeccCchHHhc
Q 010187 325 SCLSLMNHLRIYIPELFP--DLNKILFLDDDVVVQHDLSSLLE 365 (516)
Q Consensus 325 ~~~S~~~y~Rf~LPellP--~ldKVLYLD~DvVV~~DLseLw~ 365 (516)
.|+.++.|+|.-|-.+|. .+++||.|.+|+.|--|.=+-|+
T Consensus 171 ~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 171 GYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 366788999999999985 58999999999999999866654
No 40
>PF03195 DUF260: Protein of unknown function DUF260; InterPro: IPR004883 The lateral organ boundaries (LOB) gene is expressed at the adaxial base of initiating lateral organs and encodes a plant-specific protein of unknown function. The N-terminal one half of the LOB protein contains a conserved approximately 100-amino acid domain (the LOB domain) that is present in 42 other Arabidopsis thaliana proteins and in proteins from a variety of other plant species. Genes encoding LOB domain (LBD) proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes [] The LOB domain contains conserved blocks of amino acids that identify the LBD gene family. In particular, a conserved C-x(2)-C-x(6)-C-x(3)-C motif, which is defining feature of the LOB domain, is present in all LBD proteins. It is possible that this motif forms a new zinc finger [].
Probab=29.78 E-value=1e+02 Score=27.07 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=35.8
Q ss_pred ccccHHHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010187 117 TLDSFNELVKEV----TSKRQDIKAFAFKTKAMLLKMEHEVQSSRQR 159 (516)
Q Consensus 117 ~~~~~~~~~~~~----~~~~~~~~~~~~kl~~~~~~~ee~~~~~~~~ 159 (516)
.++.++-++.|| +++-|.|..++..|...+..++.|+...+.|
T Consensus 54 R~~a~~Sl~yEA~~R~~dPv~Gc~G~i~~L~~ql~~~~~el~~~~~~ 100 (101)
T PF03195_consen 54 REDAMRSLVYEANARARDPVYGCVGIISQLQQQLQQLQAELALVRAQ 100 (101)
T ss_pred hhhHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 355777777775 5578999999999999999999999987765
No 41
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=28.07 E-value=1.3e+02 Score=34.24 Aligned_cols=14 Identities=21% Similarity=0.166 Sum_probs=8.7
Q ss_pred chHHHHHHHHHHHH
Q 010187 89 SLKLREELTRALIE 102 (516)
Q Consensus 89 ~~~~~~~~~~~~~~ 102 (516)
..+..+|..|++.-
T Consensus 77 ~~r~~~e~~RI~~s 90 (907)
T KOG2264|consen 77 IGRILREQKRILAS 90 (907)
T ss_pred HHHHHHHHHHHHHH
Confidence 34667777776644
No 42
>PLN02829 Probable galacturonosyltransferase
Probab=28.00 E-value=1.4e+02 Score=34.24 Aligned_cols=16 Identities=13% Similarity=0.337 Sum_probs=11.4
Q ss_pred CCCCceEEEEEeCCCC
Q 010187 235 ARPEKLVFHIVTDKKT 250 (516)
Q Consensus 235 ~~p~~ivFHIitD~~~ 250 (516)
.+|.-++|=|++|++-
T Consensus 327 ~dp~l~Hy~ifSdNVL 342 (639)
T PLN02829 327 EDPQLYHYALFSDNVL 342 (639)
T ss_pred cCCccceEEEEeccee
Confidence 3556677888888874
No 43
>PRK15383 type III secretion system protein; Provisional
Probab=24.06 E-value=36 Score=34.58 Aligned_cols=32 Identities=25% Similarity=0.479 Sum_probs=24.0
Q ss_pred CeEEEEecCeeeccCchHHhccCCCCCeEEEEecCC
Q 010187 345 NKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSS 380 (516)
Q Consensus 345 dKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~ 380 (516)
+-+||||+||++.+.|--|+.-| | +|+-.||.
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD--G--IavhV~r~ 251 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD--G--IAIHVSRK 251 (335)
T ss_pred CceEEeecceeeecccccEEcCC--c--eEEEEEec
Confidence 46899999999999999998643 3 44444543
No 44
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=23.92 E-value=37 Score=34.54 Aligned_cols=32 Identities=25% Similarity=0.532 Sum_probs=24.1
Q ss_pred CeEEEEecCeeeccCchHHhccCCCCCeEEEEecCC
Q 010187 345 NKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSS 380 (516)
Q Consensus 345 dKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~ 380 (516)
+-+||||+||++.+.|--|+.-| | +|+-.||.
T Consensus 212 ~GCIYLD~DMilT~KLG~ly~PD--G--IavhV~r~ 243 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLYAPD--G--IAVHVDCN 243 (326)
T ss_pred CceEEeecceeeecccccEEcCC--c--eEEEEEec
Confidence 56899999999999999998643 3 44444543
No 45
>PRK15384 type III secretion system protein; Provisional
Probab=23.62 E-value=36 Score=34.60 Aligned_cols=32 Identities=22% Similarity=0.466 Sum_probs=23.9
Q ss_pred CeEEEEecCeeeccCchHHhccCCCCCeEEEEecCC
Q 010187 345 NKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSS 380 (516)
Q Consensus 345 dKVLYLD~DvVV~~DLseLw~iDL~g~~iaAV~d~~ 380 (516)
+-+||||+||++.+.|--|+.-| | +|+-.||.
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD--G--IavhV~r~ 248 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD--G--IAVHVERI 248 (336)
T ss_pred CceEEeeccceeecccccEEcCC--c--eEEEEEec
Confidence 45899999999999999998643 3 44444543
No 46
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=23.19 E-value=1.3e+02 Score=26.76 Aligned_cols=69 Identities=20% Similarity=0.146 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHhhc-----CCCCCCCccccccccHHHHHHHHhcccCCH-HHHHHHHHHHHHHHHHHHHHHhhh
Q 010187 90 LKLREELTRALIEAKD-----GSGNGGGRIQGTLDSFNELVKEVTSKRQDI-KAFAFKTKAMLLKMEHEVQSSRQR 159 (516)
Q Consensus 90 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~kl~~~~~~~ee~~~~~~~~ 159 (516)
.+++.|++..+.++++ +...+...+ .+-.-.+.++++++..--+- ..++++-|+++..+|+-++.+==|
T Consensus 11 ~~l~~el~~L~d~lEevL~ssg~~a~~e~~-~lR~r~~~~Lk~~r~rl~~~~d~v~~~sk~a~~~tD~yV~e~PWq 85 (104)
T COG4575 11 DQLLAELQELLDTLEEVLKSSGSLAGDEAE-ELRSKAESALKEARDRLGDTGDAVVQRSKAAADATDDYVRENPWQ 85 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCch
Confidence 5688888888887764 222222111 12224556777777655444 778889999999999988865433
No 47
>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation. These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.
Probab=22.52 E-value=2.1e+02 Score=22.78 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCC
Q 010187 139 AFKTKAMLLKMEHEVQSSRQRESIYWHLASHGV 171 (516)
Q Consensus 139 ~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~ 171 (516)
+.-||..|..++++++......+++++.|+...
T Consensus 16 VevLK~~I~eL~~~n~~Le~EN~~Lk~~~~pe~ 48 (59)
T PF01166_consen 16 VEVLKEQIAELEERNSQLEEENNLLKQNASPEQ 48 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 457889999999999999999999999988543
Done!