Query 010191
Match_columns 515
No_of_seqs 418 out of 2471
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 22:06:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010191.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010191hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 1.7E-64 3.7E-69 519.6 28.6 306 167-514 43-355 (452)
2 PLN02533 probable purple acid 100.0 9.3E-59 2E-63 490.9 33.2 303 164-514 39-345 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 4.1E-36 9E-41 304.1 21.2 206 285-514 3-216 (294)
4 cd07378 MPP_ACP5 Homo sapiens 99.9 3.6E-25 7.7E-30 222.4 16.8 192 287-509 1-219 (277)
5 cd07395 MPP_CSTP1 Homo sapiens 99.9 2.2E-24 4.8E-29 215.1 17.9 202 285-506 3-221 (262)
6 PTZ00422 glideosome-associated 99.9 6.7E-24 1.4E-28 219.2 18.5 201 285-508 25-265 (394)
7 cd07396 MPP_Nbla03831 Homo sap 99.9 1.8E-21 3.9E-26 194.9 19.1 191 287-505 1-230 (267)
8 PF09423 PhoD: PhoD-like phosp 99.9 1.4E-21 3E-26 210.0 17.0 245 237-505 60-379 (453)
9 cd07402 MPP_GpdQ Enterobacter 99.9 8.1E-21 1.8E-25 186.5 17.6 188 288-506 1-197 (240)
10 cd07401 MPP_TMEM62_N Homo sapi 99.8 3.2E-20 6.9E-25 184.8 19.0 195 289-509 2-216 (256)
11 COG3540 PhoD Phosphodiesterase 99.8 2E-20 4.3E-25 192.4 16.4 294 174-503 43-418 (522)
12 cd07399 MPP_YvnB Bacillus subt 99.8 9.9E-20 2.1E-24 176.6 15.7 161 287-508 1-166 (214)
13 PRK11148 cyclic 3',5'-adenosin 99.8 1.2E-18 2.7E-23 175.2 18.5 195 275-504 5-208 (275)
14 KOG2679 Purple (tartrate-resis 99.8 1.4E-19 3E-24 174.1 10.9 191 283-506 40-258 (336)
15 cd00842 MPP_ASMase acid sphing 99.7 1.4E-16 3.1E-21 161.7 16.8 180 315-506 57-264 (296)
16 PF00149 Metallophos: Calcineu 99.7 1.7E-17 3.7E-22 149.9 6.9 194 287-503 1-200 (200)
17 cd07383 MPP_Dcr2 Saccharomyces 99.7 4.9E-16 1.1E-20 148.8 14.6 167 286-508 2-181 (199)
18 cd08163 MPP_Cdc1 Saccharomyces 99.7 6.4E-16 1.4E-20 153.7 15.7 162 325-506 44-231 (257)
19 cd07393 MPP_DR1119 Deinococcus 99.6 5.1E-15 1.1E-19 145.3 14.0 186 289-509 1-211 (232)
20 TIGR03767 P_acnes_RR metalloph 99.6 5.7E-14 1.2E-18 147.8 19.7 96 405-506 290-395 (496)
21 cd07392 MPP_PAE1087 Pyrobaculu 99.5 2.1E-13 4.5E-18 128.3 15.9 169 289-505 1-175 (188)
22 TIGR03729 acc_ester putative p 99.5 3.7E-13 8E-18 132.7 15.7 185 288-504 1-222 (239)
23 COG1409 Icc Predicted phosphoh 99.5 1.3E-12 2.8E-17 131.3 17.9 184 287-503 1-193 (301)
24 TIGR03768 RPA4764 metallophosp 99.5 1.7E-12 3.6E-17 135.6 18.0 98 405-504 291-412 (492)
25 cd07400 MPP_YydB Bacillus subt 99.4 2.4E-12 5.2E-17 116.5 11.8 124 289-505 1-127 (144)
26 cd07388 MPP_Tt1561 Thermus the 99.4 2.7E-11 5.8E-16 118.0 18.7 175 286-501 4-189 (224)
27 cd00840 MPP_Mre11_N Mre11 nucl 99.4 7.1E-12 1.5E-16 121.2 13.1 197 288-505 1-203 (223)
28 cd07404 MPP_MS158 Microscilla 99.4 3.4E-12 7.3E-17 118.5 10.2 150 289-504 1-150 (166)
29 cd07385 MPP_YkuE_C Bacillus su 99.4 5.4E-12 1.2E-16 122.4 12.1 170 287-510 2-173 (223)
30 PRK11340 phosphodiesterase Yae 99.2 5.4E-10 1.2E-14 112.3 15.0 76 285-372 48-125 (271)
31 KOG1432 Predicted DNA repair e 99.2 2.4E-09 5.1E-14 107.3 18.9 88 284-372 51-147 (379)
32 cd00838 MPP_superfamily metall 99.1 4.8E-10 1.1E-14 97.5 11.8 96 324-507 24-119 (131)
33 PF12850 Metallophos_2: Calcin 99.0 4.3E-09 9.3E-14 95.8 10.4 60 287-372 1-60 (156)
34 cd07379 MPP_239FB Homo sapiens 98.9 1E-08 2.3E-13 91.9 11.6 117 288-504 1-117 (135)
35 COG1408 Predicted phosphohydro 98.9 7.6E-09 1.6E-13 104.3 10.9 85 277-373 35-119 (284)
36 PRK05340 UDP-2,3-diacylglucosa 98.8 1.7E-08 3.6E-13 99.7 10.6 181 288-505 2-201 (241)
37 cd08166 MPP_Cdc1_like_1 unchar 98.8 1.6E-08 3.5E-13 96.0 9.8 48 325-372 41-93 (195)
38 cd07397 MPP_DevT Myxococcus xa 98.8 1.1E-07 2.4E-12 93.2 14.9 64 287-373 1-64 (238)
39 PF14582 Metallophos_3: Metall 98.8 4.2E-08 9.2E-13 93.6 10.6 179 287-504 6-219 (255)
40 COG1768 Predicted phosphohydro 98.7 6.3E-08 1.4E-12 88.8 9.7 184 288-506 2-202 (230)
41 cd08165 MPP_MPPE1 human MPPE1 98.7 1.2E-07 2.5E-12 87.6 11.2 56 316-372 29-89 (156)
42 cd07403 MPP_TTHA0053 Thermus t 98.7 1E-07 2.2E-12 85.0 10.4 50 452-507 58-107 (129)
43 cd07384 MPP_Cdc1_like Saccharo 98.7 6.5E-08 1.4E-12 90.6 8.3 57 315-372 35-100 (171)
44 KOG3770 Acid sphingomyelinase 98.6 3.8E-07 8.3E-12 97.9 13.6 176 315-504 199-405 (577)
45 cd07389 MPP_PhoD Bacillus subt 98.6 1.4E-07 3E-12 92.0 8.8 103 325-427 28-169 (228)
46 COG2129 Predicted phosphoester 98.6 1.4E-06 3E-11 83.5 14.6 177 286-504 3-188 (226)
47 TIGR00040 yfcE phosphoesterase 98.6 6.1E-07 1.3E-11 82.6 11.8 63 287-371 1-63 (158)
48 cd00841 MPP_YfcE Escherichia c 98.6 3.2E-07 6.9E-12 83.9 9.3 59 288-372 1-59 (155)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 8.1E-07 1.8E-11 87.2 12.3 74 290-372 2-81 (231)
50 cd00845 MPP_UshA_N_like Escher 98.5 1.5E-06 3.2E-11 86.1 12.2 196 287-513 1-216 (252)
51 cd08164 MPP_Ted1 Saccharomyces 98.5 7.7E-07 1.7E-11 84.5 9.4 49 324-373 42-112 (193)
52 TIGR00583 mre11 DNA repair pro 98.4 1.3E-06 2.7E-11 92.4 9.6 84 286-372 3-123 (405)
53 cd07394 MPP_Vps29 Homo sapiens 98.3 1.4E-05 2.9E-10 75.4 13.7 65 288-372 1-65 (178)
54 cd07406 MPP_CG11883_N Drosophi 98.3 6.4E-06 1.4E-10 82.2 12.1 186 287-504 1-208 (257)
55 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.3 1.7E-05 3.6E-10 79.4 15.0 167 325-510 27-236 (262)
56 cd07410 MPP_CpdB_N Escherichia 98.3 1.5E-05 3.3E-10 80.2 14.7 199 287-505 1-232 (277)
57 cd07398 MPP_YbbF-LpxH Escheric 98.2 3.5E-06 7.6E-11 81.3 7.9 74 290-372 1-82 (217)
58 cd07425 MPP_Shelphs Shewanella 98.2 5.3E-06 1.2E-10 80.2 7.7 68 290-372 1-80 (208)
59 cd07411 MPP_SoxB_N Thermus the 98.1 6.2E-05 1.3E-09 75.4 13.7 190 287-504 1-220 (264)
60 cd07382 MPP_DR1281 Deinococcus 98.0 0.00014 3E-09 72.4 15.4 185 288-513 1-189 (255)
61 TIGR00619 sbcd exonuclease Sbc 98.0 1.1E-05 2.4E-10 80.4 7.4 83 287-372 1-88 (253)
62 cd07412 MPP_YhcR_N Bacillus su 98.0 0.00016 3.6E-09 73.3 15.5 84 287-373 1-89 (288)
63 cd07408 MPP_SA0022_N Staphyloc 98.0 0.00013 2.8E-09 72.7 14.4 196 287-506 1-216 (257)
64 cd07405 MPP_UshA_N Escherichia 97.9 0.00023 4.9E-09 72.2 14.3 52 447-505 172-223 (285)
65 COG0420 SbcD DNA repair exonuc 97.9 2.3E-05 5.1E-10 82.9 7.2 84 287-372 1-88 (390)
66 KOG3662 Cell division control 97.9 8.6E-05 1.9E-09 77.6 10.6 128 284-426 46-183 (410)
67 cd07407 MPP_YHR202W_N Saccharo 97.9 0.00032 6.9E-09 71.0 14.5 199 286-504 5-232 (282)
68 PHA02546 47 endonuclease subun 97.8 3.7E-05 8E-10 79.9 7.6 83 287-372 1-89 (340)
69 PRK10966 exonuclease subunit S 97.8 4.2E-05 9.2E-10 81.3 7.8 83 287-372 1-87 (407)
70 cd07409 MPP_CD73_N CD73 ecto-5 97.8 0.00056 1.2E-08 69.2 15.0 79 407-504 131-219 (281)
71 TIGR00282 metallophosphoestera 97.8 0.00096 2.1E-08 66.8 16.1 182 287-509 1-187 (266)
72 cd07380 MPP_CWF19_N Schizosacc 97.8 6.6E-05 1.4E-09 68.7 7.2 110 315-506 15-126 (150)
73 PRK09419 bifunctional 2',3'-cy 97.7 0.00066 1.4E-08 81.5 15.6 196 283-504 657-883 (1163)
74 PRK09558 ushA bifunctional UDP 97.6 0.00089 1.9E-08 74.2 14.3 199 284-503 32-257 (551)
75 COG2908 Uncharacterized protei 97.5 0.00029 6.2E-09 68.5 7.8 74 290-372 1-80 (237)
76 COG0737 UshA 5'-nucleotidase/2 97.4 0.00089 1.9E-08 73.6 11.3 205 281-503 21-247 (517)
77 PRK09453 phosphodiesterase; Pr 97.4 0.00043 9.4E-09 65.2 7.6 71 287-372 1-76 (182)
78 cd07391 MPP_PF1019 Pyrococcus 97.3 0.00035 7.6E-09 65.3 6.0 55 317-372 33-88 (172)
79 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00048 1E-08 68.0 6.5 76 290-372 2-94 (243)
80 cd07390 MPP_AQ1575 Aquifex aeo 97.2 0.00049 1.1E-08 64.1 5.5 77 290-372 2-82 (168)
81 TIGR00024 SbcD_rel_arch putati 97.2 0.00079 1.7E-08 65.9 6.5 84 287-372 15-102 (225)
82 PRK00166 apaH diadenosine tetr 97.2 0.00099 2.1E-08 67.2 7.4 64 288-371 2-68 (275)
83 cd07423 MPP_PrpE Bacillus subt 97.1 0.0012 2.6E-08 65.0 7.3 66 288-371 2-79 (234)
84 TIGR01530 nadN NAD pyrophospha 97.1 0.011 2.4E-07 65.5 15.8 190 287-504 1-219 (550)
85 PRK04036 DNA polymerase II sma 97.1 0.0017 3.6E-08 71.1 9.0 82 284-372 241-343 (504)
86 COG4186 Predicted phosphoester 97.1 0.0094 2E-07 54.1 11.7 80 288-372 5-86 (186)
87 PHA02239 putative protein phos 97.1 0.0014 3.1E-08 64.5 7.3 66 288-371 2-72 (235)
88 COG0622 Predicted phosphoester 97.0 0.0089 1.9E-07 56.0 11.6 90 287-425 2-91 (172)
89 cd07424 MPP_PrpA_PrpB PrpA and 97.0 0.0017 3.7E-08 62.5 7.0 63 288-372 2-67 (207)
90 cd08162 MPP_PhoA_N Synechococc 97.0 0.0088 1.9E-07 61.5 12.5 39 447-504 206-245 (313)
91 PRK13625 bis(5'-nucleosyl)-tet 97.0 0.002 4.3E-08 63.9 7.3 66 288-371 2-78 (245)
92 cd07413 MPP_PA3087 Pseudomonas 96.9 0.0027 5.9E-08 62.0 7.4 66 289-372 1-76 (222)
93 PRK11907 bifunctional 2',3'-cy 96.9 0.013 2.9E-07 67.2 13.8 96 276-373 105-214 (814)
94 cd07387 MPP_PolD2_C PolD2 (DNA 96.8 0.04 8.7E-07 54.9 15.3 138 289-443 2-176 (257)
95 PRK11439 pphA serine/threonine 96.7 0.0032 7E-08 61.2 6.5 64 287-372 17-83 (218)
96 PRK09968 serine/threonine-spec 96.6 0.0047 1E-07 60.1 7.0 63 287-371 15-80 (218)
97 cd07422 MPP_ApaH Escherichia c 96.5 0.0062 1.3E-07 60.8 6.9 63 290-372 2-67 (257)
98 cd07421 MPP_Rhilphs Rhilph pho 96.5 0.0088 1.9E-07 60.5 7.8 66 288-371 3-79 (304)
99 COG5555 Cytolysin, a secreted 96.4 0.0058 1.3E-07 60.5 6.1 169 328-504 128-335 (392)
100 PRK09419 bifunctional 2',3'-cy 96.4 0.034 7.4E-07 67.0 13.7 49 447-505 233-282 (1163)
101 cd00144 MPP_PPP_family phospho 96.2 0.011 2.4E-07 57.2 6.6 65 290-372 1-68 (225)
102 PRK09418 bifunctional 2',3'-cy 96.2 0.13 2.8E-06 59.1 16.0 86 286-373 39-143 (780)
103 cd07381 MPP_CapA CapA and rela 96.2 0.13 2.8E-06 50.5 14.2 87 408-505 123-221 (239)
104 PF00041 fn3: Fibronectin type 96.1 0.015 3.2E-07 46.5 6.1 74 168-262 2-77 (85)
105 TIGR01390 CycNucDiestase 2',3' 96.0 0.086 1.9E-06 59.4 13.4 85 287-373 3-100 (626)
106 smart00854 PGA_cap Bacterial c 95.8 0.19 4.1E-06 49.5 13.7 64 437-512 162-225 (239)
107 PRK09420 cpdB bifunctional 2', 95.7 0.22 4.7E-06 56.4 14.9 87 285-373 24-123 (649)
108 TIGR00668 apaH bis(5'-nucleosy 95.7 0.024 5.2E-07 57.1 6.4 64 288-371 2-68 (279)
109 cd07420 MPP_RdgC Drosophila me 95.3 0.045 9.7E-07 56.4 7.2 67 288-372 52-123 (321)
110 KOG4221 Receptor mediating net 95.0 0.54 1.2E-05 55.2 15.1 131 125-278 570-711 (1381)
111 KOG2863 RNA lariat debranching 94.8 0.17 3.6E-06 52.0 9.4 181 287-502 1-229 (456)
112 COG1407 Predicted ICC-like pho 94.8 0.08 1.7E-06 51.8 7.0 84 287-373 20-111 (235)
113 cd07416 MPP_PP2B PP2B, metallo 94.6 0.1 2.3E-06 53.4 7.5 67 288-372 44-114 (305)
114 PF13277 YmdB: YmdB-like prote 94.6 0.59 1.3E-05 46.2 12.3 147 325-504 26-177 (253)
115 PF09587 PGA_cap: Bacterial ca 94.5 0.26 5.5E-06 48.9 10.1 63 433-506 169-231 (250)
116 smart00156 PP2Ac Protein phosp 93.8 0.22 4.8E-06 50.2 7.9 67 288-372 29-99 (271)
117 cd07418 MPP_PP7 PP7, metalloph 93.8 0.16 3.5E-06 53.3 7.1 67 288-372 67-138 (377)
118 cd07415 MPP_PP2A_PP4_PP6 PP2A, 93.7 0.18 4E-06 51.1 7.1 67 288-372 43-113 (285)
119 KOG0196 Tyrosine kinase, EPH ( 93.6 0.64 1.4E-05 52.6 11.5 95 165-280 439-537 (996)
120 cd07414 MPP_PP1_PPKL PP1, PPKL 93.2 0.23 5E-06 50.6 7.1 25 478-502 220-244 (293)
121 COG1311 HYS2 Archaeal DNA poly 93.2 0.27 5.8E-06 52.6 7.7 83 284-372 223-321 (481)
122 cd07419 MPP_Bsu1_C Arabidopsis 93.2 0.26 5.7E-06 50.6 7.5 23 478-500 240-262 (311)
123 KOG2310 DNA repair exonuclease 92.9 0.14 3.1E-06 55.1 5.1 53 285-341 12-67 (646)
124 cd00063 FN3 Fibronectin type 3 92.9 0.74 1.6E-05 35.9 8.4 36 240-275 56-91 (93)
125 KOG3513 Neural cell adhesion m 92.7 6.5 0.00014 46.3 18.3 194 49-282 718-918 (1051)
126 cd07417 MPP_PP5_C PP5, C-termi 92.7 0.33 7.1E-06 50.0 7.3 25 478-502 231-255 (316)
127 PTZ00239 serine/threonine prot 92.7 0.35 7.5E-06 49.5 7.4 66 289-372 45-114 (303)
128 COG1692 Calcineurin-like phosp 92.6 2.7 5.9E-05 41.3 12.9 181 287-507 1-184 (266)
129 PTZ00480 serine/threonine-prot 92.3 0.37 8.1E-06 49.6 7.1 25 478-502 229-253 (320)
130 PTZ00244 serine/threonine-prot 92.0 0.36 7.9E-06 49.2 6.6 24 479-502 223-246 (294)
131 PF07888 CALCOCO1: Calcium bin 89.2 3.2 7E-05 45.5 11.0 99 64-184 22-132 (546)
132 KOG4419 5' nucleotidase [Nucle 88.1 2.8 6E-05 46.1 9.6 56 431-503 211-269 (602)
133 smart00060 FN3 Fibronectin typ 86.2 4.9 0.00011 30.0 7.8 22 240-261 56-77 (83)
134 PF04042 DNA_pol_E_B: DNA poly 85.7 1.3 2.8E-05 42.4 5.1 74 289-372 1-91 (209)
135 KOG3947 Phosphoesterases [Gene 84.2 2.6 5.6E-05 42.1 6.3 64 286-373 61-127 (305)
136 PTZ00235 DNA polymerase epsilo 78.1 10 0.00022 38.5 8.3 75 286-371 27-121 (291)
137 KOG4221 Receptor mediating net 74.8 50 0.0011 39.7 13.5 126 124-278 479-611 (1381)
138 PF10179 DUF2369: Uncharacteri 72.2 76 0.0016 32.5 12.8 20 243-262 262-281 (300)
139 KOG3513 Neural cell adhesion m 58.7 1.2E+02 0.0026 36.2 12.5 132 127-281 577-715 (1051)
140 COG0622 Predicted phosphoester 56.5 20 0.00044 33.5 5.0 40 452-504 83-122 (172)
141 KOG2476 Uncharacterized conser 56.4 16 0.00034 39.2 4.6 70 287-369 6-75 (528)
142 KOG0372 Serine/threonine speci 53.4 40 0.00087 33.4 6.5 66 289-372 45-114 (303)
143 KOG0373 Serine/threonine speci 52.9 45 0.00098 32.5 6.6 65 289-372 48-117 (306)
144 KOG3325 Membrane coat complex 45.3 19 0.00042 32.8 2.8 26 480-505 96-121 (183)
145 KOG0374 Serine/threonine speci 45.2 27 0.00058 36.3 4.2 23 479-501 232-254 (331)
146 TIGR02855 spore_yabG sporulati 42.8 38 0.00082 34.0 4.6 50 435-502 115-165 (283)
147 KOG0371 Serine/threonine prote 39.7 73 0.0016 31.9 6.0 66 289-372 62-131 (319)
148 COG2248 Predicted hydrolase (m 38.5 89 0.0019 31.3 6.3 72 286-372 176-250 (304)
149 PF09294 Interfer-bind: Interf 38.1 43 0.00093 27.9 3.8 19 242-260 68-86 (106)
150 PF05582 Peptidase_U57: YabG p 37.2 57 0.0012 33.0 4.9 50 435-502 116-166 (287)
151 PF10179 DUF2369: Uncharacteri 36.4 1E+02 0.0023 31.5 6.8 20 242-261 16-35 (300)
152 cd02856 Glycogen_debranching_e 35.0 52 0.0011 27.6 3.8 24 237-260 43-66 (103)
153 PF06874 FBPase_2: Firmicute f 34.1 27 0.00059 39.0 2.3 50 317-373 176-225 (640)
154 TIGR02039 CysD sulfate adenyly 31.8 1.6E+02 0.0035 30.0 7.4 79 416-500 50-128 (294)
155 cd02853 MTHase_N_term Maltooli 30.1 69 0.0015 25.8 3.6 21 238-259 39-59 (85)
156 cd02860 Pullulanase_N_term Pul 29.2 71 0.0015 26.5 3.7 24 237-260 45-68 (100)
157 cd02852 Isoamylase_N_term Isoa 29.2 66 0.0014 27.7 3.6 23 238-260 48-70 (119)
158 PF07353 Uroplakin_II: Uroplak 29.1 64 0.0014 29.7 3.4 19 243-261 104-122 (184)
159 cd01987 USP_OKCHK USP domain i 28.9 3E+02 0.0064 23.1 7.7 23 480-502 74-96 (124)
160 PRK05253 sulfate adenylyltrans 23.6 2.7E+02 0.0059 28.5 7.3 82 416-503 58-139 (301)
161 cd07390 MPP_AQ1575 Aquifex aeo 23.4 46 0.001 30.5 1.6 19 490-508 124-142 (168)
162 KOG4258 Insulin/growth factor 20.9 3.8E+02 0.0082 31.5 8.2 120 169-295 489-623 (1025)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-64 Score=519.62 Aligned_cols=306 Identities=44% Similarity=0.758 Sum_probs=250.5
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
++|+|+||++++..++|+|+|.|.+. ....|+||...+......+ ......+|+.... +|+..|++|+|+|+
T Consensus 43 ~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~---~~~~~~~~~~y~~--~~~~sg~ih~~~~~ 114 (452)
T KOG1378|consen 43 NSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAA---RGMTEAWTDGYAN--GWRDSGYIHDAVMK 114 (452)
T ss_pred CCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCcccccc---ccceEEEeccccc--ccceeeeEeeeeec
Confidence 67999999999998899999999964 3489999976444222111 1111112332222 56789999999999
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN 326 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~ 326 (515)
+|+|+|+|+||||++ ..||++|+|+|+| ++..+.+|+++||||...... ++.....+..+
T Consensus 115 ~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~~k 174 (452)
T KOG1378|consen 115 NLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEENLK 174 (452)
T ss_pred CCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhcccC
Confidence 999999999999986 3499999999998 455679999999999876422 23333343357
Q ss_pred CCEEEEcCccccCCCch-hHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCC--
Q 010191 327 IDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN-- 403 (515)
Q Consensus 327 pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~-- 403 (515)
+|+|||+|||+|++++. .+||+|++++|++++.+|+|++.||||++++... |+.+|..||.||.+.
T Consensus 175 ~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~s~ 243 (452)
T KOG1378|consen 175 PDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNSSE 243 (452)
T ss_pred CcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCcCC
Confidence 99999999999999998 6999999999999999999999999999976553 557899999999643
Q ss_pred -CCceEEEEEeCCEEEEEEcCCCCc--CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCC-CccCCCCCchhh
Q 010191 404 -RAKFWYSTDYGMFRFCIADTEQDW--REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS-YAVEGSFAEPMG 479 (515)
Q Consensus 404 -~~~~~Ysfd~G~v~fi~Ldt~~~~--~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~-~~~~~~~~~~~~ 479 (515)
..++||||++|+||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |+|... +..++.. +.+
T Consensus 244 s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~~- 320 (452)
T KOG1378|consen 244 SDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ESM- 320 (452)
T ss_pred CCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hhh-
Confidence 356999999999999999999985 456899999999999999877999999999999 777542 3444433 244
Q ss_pred HHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
|..||+||.+|+||+||+||+|+|||+||+||.+|
T Consensus 321 ~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 321 REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 88999999999999999999999999999999998
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=9.3e-59 Score=490.89 Aligned_cols=303 Identities=27% Similarity=0.445 Sum_probs=246.9
Q ss_pred CCCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecC-cceEEeccccCCCCCccccccCCCeEEE
Q 010191 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPA-GTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~-~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
+++..|.|+||++++ .++|+|+|.|... ..+.|+||++++....++. .+.+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 477899999999996 8899999999864 4689999998766554443 33456521 123 4799999
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHH
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~ 322 (515)
|+|+||+|||+|+|||+.. .+|+.++|+|+|.. .++||+++||+|.... ...+++.+.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 25889999998853 4699999999986431 1246666654
Q ss_pred hcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC
Q 010191 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE 402 (515)
Q Consensus 323 ~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~ 402 (515)
.+||||||+|||+|++++..+||.|++.++++++.+|+|+++||||.+... ....+....|..+|.||..
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 589999999999999988899999999999999999999999999986321 0112334567789999963
Q ss_pred ---CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhh
Q 010191 403 ---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479 (515)
Q Consensus 403 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (515)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+|+++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2357899999999999999999988888999999999999998888999999999999 88754432211 11223
Q ss_pred HHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
|+.|++||.+|+||++|+||+|.|||++|+|+++|
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~ 345 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT 345 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc
Confidence 88999999999999999999999999999999987
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=4.1e-36 Score=304.15 Aligned_cols=206 Identities=41% Similarity=0.718 Sum_probs=161.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch--hHHHHHHHHHhhhhcCCCE
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~vP~ 362 (515)
.++||+++||+|... ..+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~-----------~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNT-----------NNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCC-----------CCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 459999999998752 124578888887556899999999999988765 8999999999999999999
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccC---CCCCCceEEEEEeCCEEEEEEcCCCCc---CCCHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP---TENRAKFWYSTDYGMFRFCIADTEQDW---REGTEQYRF 436 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~g~~Q~~W 436 (515)
++++||||........+... + ..++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA------F----FPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc------c----cccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999975432211100 0 0011122 223467899999999999999999765 567899999
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
|+++|+++++++.||+||++|+|+ |++....... ..... .++.|++||++|+|+++|+||+|.|+|++|+|+++|
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~-~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~ 216 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEK-MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTV 216 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHH-HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEe
Confidence 999999987667899999999999 8765432211 11122 388999999999999999999999999999999887
No 4
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.93 E-value=3.6e-25 Score=222.40 Aligned_cols=192 Identities=23% Similarity=0.375 Sum_probs=132.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch----hHHH-HHHHHHhhhhcCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~----~~wd-~f~~~i~~l~~~vP 361 (515)
++|+++||+|..... .+....+.+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~~-------~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGTA-------GQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCCH-------HHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 479999999975210 112233445555554 6899999999999987742 3343 34445554556899
Q ss_pred EEEccCCCCCCCCCCCC-CCCCCCCCCcccccccceeccCCCCCCceEEEEEeC------CEEEEEEcCCCCc-------
Q 010191 362 YMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYG------MFRFCIADTEQDW------- 427 (515)
Q Consensus 362 ~~~v~GNHE~~~~~~g~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G------~v~fi~Ldt~~~~------- 427 (515)
+|+++||||........ .|.. .++..++.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986321100 0000 0012233333 468999998 7999999998632
Q ss_pred --------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCc
Q 010191 428 --------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGH 499 (515)
Q Consensus 428 --------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH 499 (515)
..+.+|++||+++|+++. .+|+||++|+|+ |+.... .. ....++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~-~~~~~~-~~-----~~~~~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPI-YSSGEH-GP-----TSCLVDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccc-eeCCCC-CC-----cHHHHHHHHHHHHHcCCCEEEeCC
Confidence 135799999999999853 389999999999 765432 11 122388999999999999999999
Q ss_pred cccccccccc
Q 010191 500 VHNYERICPI 509 (515)
Q Consensus 500 ~H~YeRt~p~ 509 (515)
+|.+++..+-
T Consensus 210 ~H~~~~~~~~ 219 (277)
T cd07378 210 DHNLQHIKDD 219 (277)
T ss_pred cccceeeecC
Confidence 9999988653
No 5
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.92 E-value=2.2e-24 Score=215.14 Aligned_cols=202 Identities=17% Similarity=0.128 Sum_probs=134.5
Q ss_pred CceEEEEEeecCCCCCCCCCccc--ccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCch----hHHHHHHHHHh
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYN--NFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIE 354 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~--~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~----~~wd~f~~~i~ 354 (515)
.+++|++++|+|.+...+...+. .+ ......++++++. .++||||+++|||++..... .+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 35999999999998643221110 11 1122234444333 24899999999999765432 45666777777
Q ss_pred hhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc------C
Q 010191 355 PIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW------R 428 (515)
Q Consensus 355 ~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~------~ 428 (515)
.+...+|+++++||||....... + ...+|.- ..+..||+|++|+++||+|||.... .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~----------~----~~~~f~~---~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTE----------E----SIKDYRD---VFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCCh----------h----HHHHHHH---HhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 76668999999999998522110 0 0011110 0123478999999999999997532 2
Q ss_pred CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCC-chhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA-EPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 429 ~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~-~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
...+|++||+++|+++.+.+.+++|+++|+|+ +..... ..+..+. ....++.|.++|++++|+++|+||+|.+++.
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~ 221 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGG 221 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCce
Confidence 34799999999999975445678999999999 643321 1111111 1112789999999999999999999999873
No 6
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.91 E-value=6.7e-24 Score=219.20 Aligned_cols=201 Identities=15% Similarity=0.221 Sum_probs=132.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCc----hhHHHHHHHH-Hhhhh--
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQ-IEPIA-- 357 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~-i~~l~-- 357 (515)
..++|+++||+|.+.. -|....+.+.++.++ .++|||+.+||+. .+|- +.+|+.-|+. .....
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3589999999996432 123334455555554 6899999999998 4543 4567653333 33322
Q ss_pred cCCCEEEccCCCCCCCCCCCC--CCCC----CCCCC--cc--cccccceeccCCCCCCceEEEE----Ee----------
Q 010191 358 STVPYMIASGNHERDWPGTGS--FYGN----MDSGG--EC--GVLVENMFYVPTENRAKFWYST----DY---------- 413 (515)
Q Consensus 358 ~~vP~~~v~GNHE~~~~~~g~--~y~~----~dsgg--e~--g~~~~~~f~~P~~~~~~~~Ysf----d~---------- 413 (515)
-++|+++++||||+..+.... .|.. .+.-. +- ......|+.||. .||++ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 478999999999985221100 0110 00000 00 001135788873 46754 22
Q ss_pred ---CCEEEEEEcCCCC---c---CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHH
Q 010191 414 ---GMFRFCIADTEQD---W---REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQ 484 (515)
Q Consensus 414 ---G~v~fi~Ldt~~~---~---~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 484 (515)
..+.||++||... + .....|++||+++|+.+ ++.++|+||++|||+ |+++.. +.. ..+ ++.|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~h-g~~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSS-KGD----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCC-CCC----HHH-HHHHH
Confidence 2289999999631 1 12468999999999754 366889999999999 998653 221 234 88999
Q ss_pred HHHHhcCCeEEEeCcccccccccc
Q 010191 485 KLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 485 ~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
|||++|+||++|+||+|.|||..+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~~ 265 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLTD 265 (394)
T ss_pred HHHHHcCcCEEEEccccceEEecC
Confidence 999999999999999999999753
No 7
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=1.8e-21 Score=194.93 Aligned_cols=191 Identities=21% Similarity=0.298 Sum_probs=124.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~vP~ 362 (515)
|||++++|+|....+.... .+...+...++++++.+ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 6899999999665321100 01122334445555442 469999999999954432 14455555555544 5899
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC----------------
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD---------------- 426 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---------------- 426 (515)
++++||||....... .+ . + .........||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~~-~~-----------~----~-~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 77 HHVLGNHDLYNPSRE-YL-----------L----L-YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EEecCccccccccHh-hh-----------h----c-ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 999999998632110 00 0 0 0111234568999999999999999531
Q ss_pred ------------------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHH
Q 010191 427 ------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQ 488 (515)
Q Consensus 427 ------------------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~ 488 (515)
-..+.+|++||++.|++...+ ..++||++|+|+ +.... ...... . .++.+.+++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~-~~~~~--~~~~~~-~--~~~~~~~ll~ 212 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPL-HPEST--SPHGLL-W--NHEEVLSILR 212 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccC-CCCCC--Cccccc-c--CHHHHHHHHH
Confidence 023479999999999986433 345899999998 65432 111111 1 1678899999
Q ss_pred hc-CCeEEEeCccccccc
Q 010191 489 KY-KVDIAVFGHVHNYER 505 (515)
Q Consensus 489 k~-~VdlvlsGH~H~YeR 505 (515)
++ +|+++|+||+|.++.
T Consensus 213 ~~~~V~~v~~GH~H~~~~ 230 (267)
T cd07396 213 AYGCVKACISGHDHEGGY 230 (267)
T ss_pred hCCCEEEEEcCCcCCCCc
Confidence 95 899999999999974
No 8
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.87 E-value=1.4e-21 Score=209.98 Aligned_cols=245 Identities=18% Similarity=0.315 Sum_probs=125.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHH
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNT 316 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~ 316 (515)
..+.+++.++||+|+|+|+||+... +....|..++|||+|... ...+||++++|.+... +....
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999984 123447899999996543 3459999999997532 12467
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCc-----------------------hhH----HHHH--HHHHhhhhcCCCEEEccC
Q 010191 317 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------ISQ----WDQF--TAQIEPIASTVPYMIASG 367 (515)
Q Consensus 317 ~~~l~~~~~~pDfVl~~GDi~y~~g~-----------------------~~~----wd~f--~~~i~~l~~~vP~~~v~G 367 (515)
+.+++++ .+|||+||+||.+|+++. ... |..+ ...++.+.+++|+++++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999998741 111 2222 234567778999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc------cccccee-ccCCC------CCCceEEEEEeCC-EEEEEEcCCCCcC-----
Q 010191 368 NHERDWPGTGSFYGNMDSGGECG------VLVENMF-YVPTE------NRAKFWYSTDYGM-FRFCIADTEQDWR----- 428 (515)
Q Consensus 368 NHE~~~~~~g~~y~~~dsgge~g------~~~~~~f-~~P~~------~~~~~~Ysfd~G~-v~fi~Ldt~~~~~----- 428 (515)
+||+..+..+. ........+.. ..++..+ ++|.. .....|++|.+|+ +.|++||++....
T Consensus 203 DHdi~nn~~~~-~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~ 281 (453)
T PF09423_consen 203 DHDIGNNWWGD-GAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCD 281 (453)
T ss_dssp STTTSTT-BTT-B-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCC
T ss_pred CceecccccCC-ccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhcccccccc
Confidence 99996322110 00000000000 0001111 13321 2356799999999 9999999986321
Q ss_pred ----------------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCC---------CccCCCCCchhhHHHH
Q 010191 429 ----------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS---------YAVEGSFAEPMGRESL 483 (515)
Q Consensus 429 ----------------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~---------~~~~~~~~~~~~r~~l 483 (515)
.|.+|++||++.|++ +.++|+|+..-.|+ ...... ....+.+.. .|+.|
T Consensus 282 ~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~--er~~L 355 (453)
T PF09423_consen 282 GPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPA--ERQRL 355 (453)
T ss_dssp SSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHH--HHHHH
T ss_pred ccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHH--HHHHH
Confidence 268999999999998 56899999988887 322111 001112222 28999
Q ss_pred HHHHHhcCCe--EEEeCccccccc
Q 010191 484 QKLWQKYKVD--IAVFGHVHNYER 505 (515)
Q Consensus 484 ~~Ll~k~~Vd--lvlsGH~H~YeR 505 (515)
..+|.+.++. ++|+|.+|...-
T Consensus 356 l~~l~~~~~~~vV~LSGDvH~~~~ 379 (453)
T PF09423_consen 356 LDFLRESGIRNVVFLSGDVHASAA 379 (453)
T ss_dssp HHHHHHTT---EEEEE-SSSSEEE
T ss_pred HHHHHhhCCCCEEEEecCcchhee
Confidence 9999988875 899999998763
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.86 E-value=8.1e-21 Score=186.49 Aligned_cols=188 Identities=15% Similarity=0.217 Sum_probs=125.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998754210000 01123344444443 2489999999999965 4456677777777766 89999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc----CCCHHHHHHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFIEH 439 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~g~~Q~~WL~~ 439 (515)
.++||||..... ..+ |..........+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAAM-RAV-----------------FPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHHH-HHh-----------------hccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 999999974110 011 1000001234578999999999999987532 235789999999
Q ss_pred HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccccc
Q 010191 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (515)
Q Consensus 440 ~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 506 (515)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||+|.+.+.
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~ 197 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDG 197 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHe
Confidence 999863 334788899998 5542211111 1111 277999999999 9999999999997643
No 10
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.85 E-value=3.2e-20 Score=184.83 Aligned_cols=195 Identities=15% Similarity=0.192 Sum_probs=122.7
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCC--------chhHHHHHHHHHhhhhc--
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIAS-- 358 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g--------~~~~wd~f~~~i~~l~~-- 358 (515)
|+.++|+|.+..... .. ....+.+...+++ .+||+|+++||+++... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~-~~----~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-NR----AQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-hh----hhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 00 0000222333333 57999999999996431 25678888887765433
Q ss_pred CCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC----------cC
Q 010191 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD----------WR 428 (515)
Q Consensus 359 ~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~ 428 (515)
..|++.++||||....... +. +. ..+.............++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998411100 00 00 011111111111111222334459999999999742 12
Q ss_pred CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccc
Q 010191 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 429 ~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
...+|++||++.|++. .+.+++||++|+|+ +.... .. ....+ .+.++|++++|+++|+||+|.+++-.|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~---~~----~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIIS---PS----AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccC---CC----cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3489999999999975 34568999999998 54211 11 11213 399999999999999999999999666
Q ss_pred c
Q 010191 509 I 509 (515)
Q Consensus 509 ~ 509 (515)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 6
No 11
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.84 E-value=2e-20 Score=192.41 Aligned_cols=294 Identities=20% Similarity=0.291 Sum_probs=189.0
Q ss_pred eeecCCCCeEEEEEEeCCCCC-----CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 010191 174 LAQGKVWNEMTVTWTSGYGIN-----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (515)
Q Consensus 174 La~~~~~~~m~V~W~t~~~~~-----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL 248 (515)
++.|+-...-.|-|+--.... +....+||++.+.....+..++.. .+ .+..+.+++.++||
T Consensus 43 VaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~-----------a~---p~~dhtv~v~~~gL 108 (522)
T COG3540 43 VASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI-----------AS---PELDHTVHVDLRGL 108 (522)
T ss_pred cccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc-----------CC---cccCceEEEeccCC
Confidence 444544555666786543100 334567777766543322221111 11 13468899999999
Q ss_pred CCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCC
Q 010191 249 WPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNID 328 (515)
Q Consensus 249 ~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pD 328 (515)
+|++.|+||+..+ ..-|.+..|||+|+++.. ++++.+||..+.. |+.+-..+.+.|.+ .+||
T Consensus 109 ~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~~--i~~~~fa~ascQ~---------~~~gy~~aY~~ma~--~~~D 170 (522)
T COG3540 109 SPDQDYFYRFKAG-----DERSPVGRTRTAPAPGRA--IRFVWFADASCQG---------WEIGYMTAYKTMAK--EEPD 170 (522)
T ss_pred CCCceEEEEEeeC-----CccccccccccCCCCCCc--chhhhhhhccccc---------cccchhHHHHHHHh--cCCC
Confidence 9999999999875 234789999999987665 8899999986543 34455667777776 5799
Q ss_pred EEEEcCccccCCCch-----------------------------hHHHHH--HHHHhhhhcCCCEEEccCCCCCCCCCCC
Q 010191 329 IVFHIGDICYANGYI-----------------------------SQWDQF--TAQIEPIASTVPYMIASGNHERDWPGTG 377 (515)
Q Consensus 329 fVl~~GDi~y~~g~~-----------------------------~~wd~f--~~~i~~l~~~vP~~~v~GNHE~~~~~~g 377 (515)
||||.||.+|+.|-. .+|..+ -..++...+..|+++.+.+||...+-..
T Consensus 171 ~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~ 250 (522)
T COG3540 171 FVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSN 250 (522)
T ss_pred EEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccc
Confidence 999999999986521 112222 1335666779999999999998743211
Q ss_pred CCCCCCCC-CCccc------ccccce-eccCCCC-----CCceEEEEEeCC-EEEEEEcCCCCcC---------------
Q 010191 378 SFYGNMDS-GGECG------VLVENM-FYVPTEN-----RAKFWYSTDYGM-FRFCIADTEQDWR--------------- 428 (515)
Q Consensus 378 ~~y~~~ds-gge~g------~~~~~~-f~~P~~~-----~~~~~Ysfd~G~-v~fi~Ldt~~~~~--------------- 428 (515)
. -...|+ -.|.- ..++.+ -.||-.. ....|-+|.||+ ..|.+||++.+..
T Consensus 251 ~-~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~ 329 (522)
T COG3540 251 S-IDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAV 329 (522)
T ss_pred c-ccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhh
Confidence 0 000011 11110 011111 1355321 257899999999 6899999986431
Q ss_pred -------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcC---CCC----CC-CccCCCCCchhhHHHHHHHHHhcCCe
Q 010191 429 -------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGY---SSD----LS-YAVEGSFAEPMGRESLQKLWQKYKVD 493 (515)
Q Consensus 429 -------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~y---ss~----~~-~~~~~~~~~~~~r~~l~~Ll~k~~Vd 493 (515)
.|.+|.+||++.|.+ +++.|.|+..-.||.- ... .. ...++.-.-+.+|+.|...+.+.++.
T Consensus 330 ~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~ 406 (522)
T COG3540 330 AGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIR 406 (522)
T ss_pred hCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCC
Confidence 268999999999998 7899999988888721 000 00 00011111234599999999998876
Q ss_pred --EEEeCccccc
Q 010191 494 --IAVFGHVHNY 503 (515)
Q Consensus 494 --lvlsGH~H~Y 503 (515)
++|.|.+|..
T Consensus 407 N~V~LtgDvH~~ 418 (522)
T COG3540 407 NTVVLTGDVHYS 418 (522)
T ss_pred CcEEEechhHHH
Confidence 9999999964
No 12
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.83 E-value=9.9e-20 Score=176.56 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=113.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh-cCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~-~~vP~~ 363 (515)
|||++++|+|..... ........++++++.. .++|+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 689999999976431 0111123445555542 579999999999965554678999999998886 679999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhc
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~ 443 (515)
+++||||.- +.+|+. ...+|++||++.|++
T Consensus 74 ~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~~ 103 (214)
T cd07399 74 VLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLKK 103 (214)
T ss_pred EECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHHH
Confidence 999999931 112221 247999999999998
Q ss_pred ccCCCCCEEEEEeccCCcCCCCCCCccCC-CCCchhhHHHHHHHHHhc-CCeEEEeCcccccccccc
Q 010191 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEG-SFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICP 508 (515)
Q Consensus 444 ~~r~~~pwiIv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p 508 (515)
.. ..++|+++|+|+ +....+..... ......+++.|++|+++| +|+++|+||+|.+.+..-
T Consensus 104 ~~---~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 104 HP---DRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CC---CCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 42 334899999998 65443221110 000112366899999998 799999999999997754
No 13
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.80 E-value=1.2e-18 Score=175.17 Aligned_cols=195 Identities=14% Similarity=0.174 Sum_probs=119.5
Q ss_pred EEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHH
Q 010191 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFT 350 (515)
Q Consensus 275 F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~ 350 (515)
.++.++. ...+||+.++|+|....... ... .....+.++++++. ..+|||||+.||++. ++...+++.+.
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~-~~~--~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~ 78 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHE-TLL--GVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFA 78 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCC-cee--ccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 4555543 24599999999997432111 110 01123344444433 247999999999995 45556777777
Q ss_pred HHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc---
Q 010191 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW--- 427 (515)
Q Consensus 351 ~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~--- 427 (515)
+.++.+ .+|+++++||||..... ..+ + +.......++.+..++++||+|||....
T Consensus 79 ~~l~~l--~~Pv~~v~GNHD~~~~~-~~~-----------------~--~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~ 136 (275)
T PRK11148 79 EGIAPL--RKPCVWLPGNHDFQPAM-YSA-----------------L--QDAGISPAKHVLIGEHWQILLLDSQVFGVPH 136 (275)
T ss_pred HHHhhc--CCcEEEeCCCCCChHHH-HHH-----------------H--hhcCCCccceEEecCCEEEEEecCCCCCCcC
Confidence 777766 68999999999984110 000 0 0000011223344456899999997532
Q ss_pred -CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccc
Q 010191 428 -REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYE 504 (515)
Q Consensus 428 -~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 504 (515)
..+.+|++||+++|++.. +.+-+|++.|+|+ .....|... ... . ..+.|.+++++| +|+++|+||+|...
T Consensus 137 G~l~~~ql~wL~~~L~~~~--~~~~vv~~hH~P~-~~~~~~~d~-~~l-~--n~~~l~~ll~~~~~v~~vl~GH~H~~~ 208 (275)
T PRK11148 137 GELSEYQLEWLERKLADAP--ERHTLVLLHHHPL-PAGCAWLDQ-HSL-R--NAHELAEVLAKFPNVKAILCGHIHQEL 208 (275)
T ss_pred CEeCHHHHHHHHHHHhhCC--CCCeEEEEcCCCC-CCCcchhhc-cCC-C--CHHHHHHHHhcCCCceEEEecccChHH
Confidence 235899999999999863 3342444444565 322222111 111 1 167899999998 89999999999865
No 14
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=1.4e-19 Score=174.05 Aligned_cols=191 Identities=22% Similarity=0.367 Sum_probs=120.5
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHH-HHHHHHhhhhc---
Q 010191 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIAS--- 358 (515)
Q Consensus 283 ~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~--- 358 (515)
++..++|+++||+|.... |+ |......+..|.++ -++|||+.+||.+|++|...+.| .|.+..+.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999994431 21 11122334445443 58999999999999998766555 44445555432
Q ss_pred -CCCEEEccCCCCCCCCCCC---CCCCCCCCCCcccccccceeccCCCCCCceEE--E----EEeCCEEEEEEcCCC---
Q 010191 359 -TVPYMIASGNHERDWPGTG---SFYGNMDSGGECGVLVENMFYVPTENRAKFWY--S----TDYGMFRFCIADTEQ--- 425 (515)
Q Consensus 359 -~vP~~~v~GNHE~~~~~~g---~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y--s----fd~G~v~fi~Ldt~~--- 425 (515)
+.|+|.+.||||+..+-.. ..|... ..|+..|.. || + +-.-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~~~----------d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLRKI----------DKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHHhh----------ccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 6799999999999732110 011111 123333321 00 0 001112233333221
Q ss_pred ----CcCC-------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeE
Q 010191 426 ----DWRE-------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (515)
Q Consensus 426 ----~~~~-------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdl 494 (515)
+++. -..|+.||+..|++ +.++|+||++|+|+ -+.+ .|+.- .+ .+++|.|||++++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~-~HG~T----~e-L~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAG-HHGPT----KE-LEKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhh-ccCCh----HH-HHHHHHHHHHhcCCcE
Confidence 1211 25788999999999 68899999999998 6553 34421 23 3899999999999999
Q ss_pred EEeCcccccccc
Q 010191 495 AVFGHVHNYERI 506 (515)
Q Consensus 495 vlsGH~H~YeRt 506 (515)
.++||+|..|..
T Consensus 247 Y~nGHDHcLQhi 258 (336)
T KOG2679|consen 247 YINGHDHCLQHI 258 (336)
T ss_pred EEecchhhhhhc
Confidence 999999998854
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.72 E-value=1.4e-16 Score=161.74 Aligned_cols=180 Identities=15% Similarity=0.173 Sum_probs=115.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCchh--------HHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCC
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSG 386 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~--------~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsg 386 (515)
.+++.+.+...+|||||++||++....... .+..+++.++.....+|+++++||||......... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 345555544468999999999997653211 24556777777778999999999999863221100 0000
Q ss_pred Cccccccccee--ccCCCC----CCceEEEEE-eCCEEEEEEcCCCCc-----------CCCHHHHHHHHHHHhcccCCC
Q 010191 387 GECGVLVENMF--YVPTEN----RAKFWYSTD-YGMFRFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQK 448 (515)
Q Consensus 387 ge~g~~~~~~f--~~P~~~----~~~~~Ysfd-~G~v~fi~Ldt~~~~-----------~~g~~Q~~WL~~~La~~~r~~ 448 (515)
......+...| .+|.+. ..+-||+++ .++++||+|||.... ....+|++||+++|+++.+++
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 00000000111 122111 245688888 889999999997532 124789999999999975333
Q ss_pred CCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC--CeEEEeCcccccccc
Q 010191 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYERI 506 (515)
Q Consensus 449 ~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~YeRt 506 (515)
..++|++|+|+ +..... . . ...++.|.+|+++|+ |.++|+||+|..+-.
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 34788899998 433210 0 0 123789999999997 789999999997743
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.70 E-value=1.7e-17 Score=149.90 Aligned_cols=194 Identities=19% Similarity=0.209 Sum_probs=101.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHH-HHHhhhhcCCCEEEc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~-~~i~~l~~~vP~~~v 365 (515)
+||+++||+|..... ... ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~-------~~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD-------DSD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH-------HCH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc-------hhH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 689999999986421 000 1122333333 378999999999998766554443322 233445678999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCccccccccee-ccCCC----CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHH
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMF-YVPTE----NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f-~~P~~----~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~ 440 (515)
+||||........ ......... ..... ..... .........+..............+..|+...
T Consensus 72 ~GNHD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (200)
T PF00149_consen 72 LGNHDYYSGNSFY----------GFYDYQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWL 140 (200)
T ss_dssp E-TTSSHHHHHHH----------HHHHHHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHH
T ss_pred ccccccceecccc----------ccccccccccccccccccccCcce-eeecccccccccccccccccccccchhccccc
Confidence 9999985211000 000000000 00000 00000 12222222222222222111222222333222
Q ss_pred HhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 441 La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
+....+...+++|+++|+|+ ++........ ......++.+..++.+++|+++|+||+|.|
T Consensus 141 ~~~~~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 141 LLLLEAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 22222245678999999998 6654321111 001223789999999999999999999987
No 17
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.68 E-value=4.9e-16 Score=148.80 Aligned_cols=167 Identities=15% Similarity=0.169 Sum_probs=102.4
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchh-HHHHHHHHHhhhh-cCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 363 (515)
.+||++++|+|.+................+.+.+++++ .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876431100000111223445555554 68999999999998655432 3444444455544 379999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhc
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~ 443 (515)
+++||||.. -....+|++||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCEEEEEeccCCcCCCCC-CC------cc--CCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccc
Q 010191 444 VD--RQKQPWLIFLAHRVLGYSSDL-SY------AV--EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 444 ~~--r~~~pwiIv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
.. +....+.++++|+|+ ..... |. +. +.........+.+..+....+|+++|+||+|.++..+.
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~ 181 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGR 181 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecc
Confidence 63 223456899999997 43211 11 10 10000011123344455668999999999999876543
No 18
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.68 E-value=6.4e-16 Score=153.74 Aligned_cols=162 Identities=19% Similarity=0.175 Sum_probs=102.6
Q ss_pred CCCCEEEEcCccccCCC--chhHHHHHHHHHhhh----hcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceec
Q 010191 325 KNIDIVFHIGDICYANG--YISQWDQFTAQIEPI----ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY 398 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l----~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~ 398 (515)
.+||+|+++||+++.+. ...+|.+..+.+..+ ...+|++.++||||+.+... ... .....|...|.
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~-~~~-------~~~~rf~~~Fg 115 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNG-VVL-------PVRQRFEKYFG 115 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCC-CCH-------HHHHHHHHHhC
Confidence 57999999999996432 134554433333333 23589999999999863211 000 00011222231
Q ss_pred cCCCCCCceEEEEEeCCEEEEEEcCCCCc-----CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCC
Q 010191 399 VPTENRAKFWYSTDYGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGS 473 (515)
Q Consensus 399 ~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-----~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~ 473 (515)
...|+|++|+++||+||+.... ....+|.+||++.|+... ...| +|+++|+|+ |.... ..++.
T Consensus 116 -------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~--~~cg~ 183 (257)
T cd08163 116 -------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPN--TSCGP 183 (257)
T ss_pred -------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCC--CCCCC
Confidence 2247899999999999997421 234689999999998753 3345 899999999 65422 11111
Q ss_pred CC--------------c-hhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 474 FA--------------E-PMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 474 ~~--------------~-~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.. + -+-.+.-..||++.+..+||+||+|-|=..
T Consensus 184 ~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 184 LRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 00 0 111345568888899999999999998543
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.62 E-value=5.1e-15 Score=145.32 Aligned_cols=186 Identities=19% Similarity=0.256 Sum_probs=111.1
Q ss_pred EEEEeecCCCCC--CCCCcccccccCcHHHHHHHHH---h-cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 289 VIIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 289 f~v~gD~g~~~~--~g~~~y~~~~~~~~~~~~~l~~---~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
+.+++|+|.... ++.+.+ .....+.++++.+ . .++||+|+++||+++. +........++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~---g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVF---GPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCccc---CccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCe
Confidence 368899998742 111222 2323344444433 2 3489999999999943 3223333334444433 3589
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCC-CceEEEEEeCCEEEEEEcCCC----Cc----------
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQ----DW---------- 427 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~----~~---------- 427 (515)
++++||||+...... .+... ++.... -..-.++.++++.|+.++... .+
T Consensus 75 ~~V~GNHD~~~~~~~--------------~~~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSAS--------------KLRKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHH--------------HHHHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 999999997311000 00000 000000 000134567889999876311 11
Q ss_pred ---CCCHHHHHHHHHHHhcccCCC-CCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 428 ---REGTEQYRFIEHCLASVDRQK-QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 428 ---~~g~~Q~~WL~~~La~~~r~~-~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
....+|++||++.|+++.... ..++|+++|+|+ +.... ..+.+..++.+++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 012568999999999864222 246899999998 54321 1346788999999999999999999
Q ss_pred cccccc
Q 010191 504 ERICPI 509 (515)
Q Consensus 504 eRt~p~ 509 (515)
++..|+
T Consensus 206 ~~~~~~ 211 (232)
T cd07393 206 GRDRAI 211 (232)
T ss_pred cccccc
Confidence 998877
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.59 E-value=5.7e-14 Score=147.85 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=71.3
Q ss_pred CceEEEEE-eCCEEEEEEcCCCCc-----CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCcc-C--CCCC
Q 010191 405 AKFWYSTD-YGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV-E--GSFA 475 (515)
Q Consensus 405 ~~~~Ysfd-~G~v~fi~Ldt~~~~-----~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~-~--~~~~ 475 (515)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||+ ++......+ . +...
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~~ 365 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEKR 365 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-ccccccccccccccccc
Confidence 56799999 999999999997531 23589999999999973 3456999999998 654321110 0 0001
Q ss_pred chhhHHHHHHHHHhc-CCeEEEeCcccccccc
Q 010191 476 EPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (515)
Q Consensus 476 ~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 506 (515)
. ..++|.++|.+| +|.++|+||+|....+
T Consensus 366 ~--n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 366 H--LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred c--CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 1 156899999998 8999999999988754
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.53 E-value=2.1e-13 Score=128.30 Aligned_cols=169 Identities=15% Similarity=0.155 Sum_probs=101.4
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCC
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 368 (515)
++++||+|.+.. .... ..++ ..++|+|+++||+++.. .......+ +.++. ..+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~~-~~~~~~~~-~~l~~--~~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNFG-GKEAAVEI-NLLLA--IGVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCcC-CHHHHHHH-HHHHh--cCCCEEEEcCC
Confidence 578999986421 1111 2222 36899999999999643 33333322 33433 27899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC------cCCCHHHHHHHHHHHh
Q 010191 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------WREGTEQYRFIEHCLA 442 (515)
Q Consensus 369 HE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------~~~g~~Q~~WL~~~La 442 (515)
||...... .. . + ..+.+ .+ ..+.++++.|+.+++... .....+|++|+ +.|+
T Consensus 62 HD~~~~~~--~~---~-------~--~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEILG--LL---T-------S--AGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHHHH--hh---h-------c--CcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 99741100 00 0 0 00111 11 235678899999987431 12346889998 4444
Q ss_pred cccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 443 ~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
. .....+|+++|+|+ +.. +....... ...+.+.+..++++++++++|+||+|.-..
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~--~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~~ 175 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGT--AVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESRG 175 (188)
T ss_pred c---cCCCCeEEEECCCC-cCC--cccccCCC-CccCCHHHHHHHHHhCCcEEEEeccccccc
Confidence 3 23344899999998 653 11111000 012467899999999999999999998643
No 22
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.50 E-value=3.7e-13 Score=132.69 Aligned_cols=185 Identities=19% Similarity=0.231 Sum_probs=103.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
||++++|+|.... .+ ...+.++++++. ..++|+|+++||++... .+...+++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~-----~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF-----DTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC-----CHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 111223333332 15799999999999532 2223444444442 46899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC-------------------
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------------------- 426 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------------------- 426 (515)
+||||+..... +. + ....+. + ..-.+.++.+..++++|++++...+
T Consensus 68 ~GNHD~~~~~~---~~------~----~~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLT---YE------E----IESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCC---HH------H----HHhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 99999742110 00 0 000000 0 0001112233345667777663111
Q ss_pred -------cC-----CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCC----CCccCCCCCchhhHHHHHHHHHhc
Q 010191 427 -------WR-----EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL----SYAVEGSFAEPMGRESLQKLWQKY 490 (515)
Q Consensus 427 -------~~-----~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~----~~~~~~~~~~~~~r~~l~~Ll~k~ 490 (515)
.. ...+|++||++.|++.. ..+ +|++.|+|+ ..... ............+.+.|..+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 00 12678999999998753 234 888889987 32110 000000000112357899999999
Q ss_pred CCeEEEeCcccccc
Q 010191 491 KVDIAVFGHVHNYE 504 (515)
Q Consensus 491 ~VdlvlsGH~H~Ye 504 (515)
+|+++|+||+|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999875
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.48 E-value=1.3e-12 Score=131.27 Aligned_cols=184 Identities=17% Similarity=0.231 Sum_probs=116.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+||+.++|.|..... ......+.++++.+ .+||+|+++||+++. +...+++...+.++.+....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999997310 11234455554443 578999999999965 666677777777775555789999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEe-CCEEEEEEcCCCCc----CCCHHHHHHHHH
Q 010191 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQDW----REGTEQYRFIEH 439 (515)
Q Consensus 365 v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~~----~~g~~Q~~WL~~ 439 (515)
++||||....+... +...+... ...+-.... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEA--------------FSDQFFNR----YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHH--------------hhhhhccc----CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 99999986432211 01011000 011111122 67899999998642 346899999999
Q ss_pred HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC--CeEEEeCccccc
Q 010191 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNY 503 (515)
Q Consensus 440 ~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~Y 503 (515)
.|++........+|+++|+|+ .....+..... . .....+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~~---l-~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRVA---L-RDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCccceee---e-ecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999864321124677777776 43322211110 1 11457778888888 999999999987
No 24
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.47 E-value=1.7e-12 Score=135.55 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=66.7
Q ss_pred CceEEEEE-eCCE--EEEEEcCCCCc-----------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCC----
Q 010191 405 AKFWYSTD-YGMF--RFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL---- 466 (515)
Q Consensus 405 ~~~~Ysfd-~G~v--~fi~Ldt~~~~-----------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~---- 466 (515)
+..||+|+ .|++ |||+||+.... ....+|++||+++|+.+. .+.|++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5844 99999987521 134899999999999874 25688899988887 54221
Q ss_pred -CCc-c-C--CCCCchhhHHHHHHHHHhc-CCeEEEeCcccccc
Q 010191 467 -SYA-V-E--GSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYE 504 (515)
Q Consensus 467 -~~~-~-~--~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 504 (515)
|.. . . ....+...-.+|..+|.+| +|.++|+||.|...
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 110 0 0 0011111124899999998 79999999999543
No 25
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.40 E-value=2.4e-12 Score=116.46 Aligned_cols=124 Identities=19% Similarity=0.283 Sum_probs=83.8
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcC-CCEEEc
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 365 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~-vP~~~v 365 (515)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999876421110 0011112223222 2579999999999964 4456777777777776554 699999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhccc
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~ 445 (515)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 446 r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
|+++|+|+ +..... ...... .++.+.+++.+++++++++||+|....
T Consensus 81 -------iv~~Hhp~-~~~~~~--~~~~~~---~~~~~~~~l~~~~~~~~l~GH~H~~~~ 127 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS--GRERLL---DAGDALKLLAEAGVDLVLHGHKHVPYV 127 (144)
T ss_pred -------EEEecCCC-CCCCcc--ccccCC---CHHHHHHHHHHcCCCEEEECCCCCcCe
Confidence 88889998 543221 111111 267899999999999999999999763
No 26
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.38 E-value=2.7e-11 Score=117.96 Aligned_cols=175 Identities=14% Similarity=0.156 Sum_probs=102.7
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++......+...+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 3689999999853 23455555432 57999999999996442333344445544433 58999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC-CCCceEEEEEe-CCEEEEEEcCCCCc--CCCHHHH----H
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE-NRAKFWYSTDY-GMFRFCIADTEQDW--REGTEQY----R 435 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~~Ysfd~-G~v~fi~Ldt~~~~--~~g~~Q~----~ 435 (515)
+++||||..... +.. ..+...-.+|.. .-... ...+ |++.|+.++..... ...++|. +
T Consensus 67 ~V~GNhD~~v~~---~l~---------~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLWE---YLR---------EAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHHH---HHH---------HHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 999999963000 000 000000001110 00111 2344 56999999866532 2344542 5
Q ss_pred HHHH-HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccc
Q 010191 436 FIEH-CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (515)
Q Consensus 436 WL~~-~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 501 (515)
||.+ .|+...+...+..|+++|.|+ |..+.. ..+.+.+..++++++..+++|||+|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~~---------h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPP-YHKGLN---------EQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCC-CCCCCC---------ccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 222221122335899999999 766311 1347799999999999999999988
No 27
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.36 E-value=7.1e-12 Score=121.23 Aligned_cols=197 Identities=11% Similarity=0.117 Sum_probs=109.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-chhHHHHHHHHHhhhh-cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 363 (515)
||++++|+|.+.......-........++++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999986421110000001123445555443 257999999999997543 2344566666776665 489999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceecc--CCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV--PTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCL 441 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~--P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~L 441 (515)
+++||||...... ... .. ......... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~-~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLG-ALS-PL-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCccccc-ccc-ch-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 9999999863221 000 00 000000000 0001122233445566888888865322 1233445555555
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
... ....+.|++.|.|+ ...... .. .. .......+...++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCee
Confidence 554 34456899999997 432211 00 00 12334455678899999999998763
No 28
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.35 E-value=3.4e-12 Score=118.55 Aligned_cols=150 Identities=17% Similarity=0.215 Sum_probs=86.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCC
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 368 (515)
|++++|+|.+.... ...+.+... ..++|+|+++||+++... ..++.. .........|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~~-~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFPI-APDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccCC-CCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 47899999764310 001111111 368999999999996432 222222 23334457899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCC
Q 010191 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQK 448 (515)
Q Consensus 369 HE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~ 448 (515)
||+.. +|. + ...||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~--G---~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII--G---TTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE--e---eecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 0 1123333221 1245555555544
Q ss_pred CCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 449 ~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
.+ +|+++|+|+ +.................++.+..++++++|+++++||+|...
T Consensus 97 ~~-~vv~~HhpP-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 GK-TVVVTHHAP-SPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CC-EEEEeCCCC-CccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23 899999998 6543211111111111235668888889999999999999874
No 29
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.35 E-value=5.4e-12 Score=122.44 Aligned_cols=170 Identities=18% Similarity=0.162 Sum_probs=98.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+||++++|+|.+... ....++++++. ..+||+|+++||+++...... +.+.+.++.+...+|+++
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986431 11223333332 257999999999997544322 345566666667899999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcc
Q 010191 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV 444 (515)
Q Consensus 365 v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~ 444 (515)
++||||+......... + ......+.+- .+.+..++.++..+.+.--... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~L----~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITVL----RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEEe----ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 0000001111 1223445556544433321111 12234566777664
Q ss_pred cCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccccc
Q 010191 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIY 510 (515)
Q Consensus 445 ~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~ 510 (515)
+ +..+.|++.|.|. + .+. +.+.++|++++||+|..+...|..
T Consensus 132 ~--~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~ 173 (223)
T cd07385 132 D--EDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGI 173 (223)
T ss_pred C--CCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEecccc
Confidence 3 3456899999985 1 111 156789999999999999766654
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.16 E-value=5.4e-10 Score=112.33 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=52.8
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
..+|+++++|+|.+... ....++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~-----------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV-----------PLSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC-----------CHHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 35999999999976321 11233333332 25899999999999622 223345666777777777899
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
++++||||+.
T Consensus 116 ~~V~GNHD~~ 125 (271)
T PRK11340 116 FACFGNHDRP 125 (271)
T ss_pred EEecCCCCcc
Confidence 9999999974
No 31
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.16 E-value=2.4e-09 Score=107.26 Aligned_cols=88 Identities=14% Similarity=0.262 Sum_probs=59.4
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccc--------cCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQ--------RGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~--------~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
++.||++.++|+|.+...++.-.+..+ ....+.++++++ .++||||+++||+++.......-..+++.+.|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 456999999999997642221111111 112345667776 48999999999999874433222345666776
Q ss_pred h-hcCCCEEEccCCCCCC
Q 010191 356 I-ASTVPYMIASGNHERD 372 (515)
Q Consensus 356 l-~~~vP~~~v~GNHE~~ 372 (515)
. ..+||+.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 4 4699999999999965
No 32
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.14 E-value=4.8e-10 Score=97.52 Aligned_cols=96 Identities=29% Similarity=0.394 Sum_probs=70.1
Q ss_pred cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCC
Q 010191 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN 403 (515)
Q Consensus 324 ~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~ 403 (515)
..++|+|+++||+++.... ..+..+..........+|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 4789999999999975443 334433333344456899999999999
Q ss_pred CCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHH
Q 010191 404 RAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL 483 (515)
Q Consensus 404 ~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 483 (515)
|++.|.|+ +....... .. ....++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~---~~~~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD---EDPGSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc---chhhHHHH
Confidence 89999998 54432111 11 11126788
Q ss_pred HHHHHhcCCeEEEeCccccccccc
Q 010191 484 QKLWQKYKVDIAVFGHVHNYERIC 507 (515)
Q Consensus 484 ~~Ll~k~~VdlvlsGH~H~YeRt~ 507 (515)
..++.+++++++|+||.|.+.++.
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999999875
No 33
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.95 E-value=4.3e-09 Score=95.78 Aligned_cols=60 Identities=18% Similarity=0.407 Sum_probs=39.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.||+++||+|.+. ..++++++...++|+|+++||++.. .++.+.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 4899999998753 2345555555679999999999851 4555555554 999999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 55 GNHD~~ 60 (156)
T PF12850_consen 55 GNHDNW 60 (156)
T ss_dssp -CCHST
T ss_pred CCcccc
Confidence 999963
No 34
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.93 E-value=1e-08 Score=91.90 Aligned_cols=117 Identities=20% Similarity=0.337 Sum_probs=75.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 367 (515)
||+++||+|.... .+ ...++|+|+++||+++. +...+++.+.+.++.+. ..++++++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999985420 11 23689999999999953 44444555555555442 123578999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCC
Q 010191 368 NHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQ 447 (515)
Q Consensus 368 NHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~ 447 (515)
|||... . . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--~ 67 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--E 67 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C--C
Confidence 999630 0 1 1
Q ss_pred CCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 448 KQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 448 ~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
. +.|++.|.|+ +..... ... ....+.+.+..++++++++++++||+|...
T Consensus 68 -~-~~ilv~H~~p-~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 68 -D-TDILVTHGPP-YGHLDL-VSS---GQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -C-CEEEEECCCC-CcCccc-ccc---CcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 2 3688889998 764321 110 011224577888899999999999999985
No 35
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.90 E-value=7.6e-09 Score=104.35 Aligned_cols=85 Identities=11% Similarity=0.121 Sum_probs=59.2
Q ss_pred cCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 277 ASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 277 T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
++..+.....++++.++|+|.... .....+.+.++.+ +.+|+|+.+||+++. .....+....+.++++
T Consensus 35 ~~~~~~~~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L 102 (284)
T COG1408 35 TPKLPASLQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKL 102 (284)
T ss_pred cCCCCcccCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhh
Confidence 333333344589999999998642 1122334444444 567999999999964 2234456677788888
Q ss_pred hcCCCEEEccCCCCCCC
Q 010191 357 ASTVPYMIASGNHERDW 373 (515)
Q Consensus 357 ~~~vP~~~v~GNHE~~~ 373 (515)
.+..+++++.||||+..
T Consensus 103 ~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 103 KAPLGVFAVLGNHDYGV 119 (284)
T ss_pred hccCCEEEEeccccccc
Confidence 89999999999999863
No 36
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.84 E-value=1.7e-08 Score=99.75 Aligned_cols=181 Identities=17% Similarity=0.223 Sum_probs=95.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCC-C---chhHHHHHHHHHhhhhcC-CC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYAN-G---YISQWDQFTAQIEPIAST-VP 361 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~-g---~~~~wd~f~~~i~~l~~~-vP 361 (515)
|+++++|+|.+... +...+.+.+.++. ..++|+|+++||+++.- + .....+...+.++.+... +|
T Consensus 2 ~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~ 72 (241)
T PRK05340 2 PTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVP 72 (241)
T ss_pred cEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCe
Confidence 78999999986431 1112223332222 35799999999999631 1 112234455666666554 89
Q ss_pred EEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHH
Q 010191 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCL 441 (515)
Q Consensus 362 ~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~L 441 (515)
++.+.||||..... .+. .++|+. .+|. ...++.++.++++.-.... ...+..++++++.+
T Consensus 73 v~~v~GNHD~~~~~--~~~------~~~g~~-----~l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~~ 132 (241)
T PRK05340 73 CYFMHGNRDFLLGK--RFA------KAAGMT-----LLPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRKV 132 (241)
T ss_pred EEEEeCCCchhhhH--HHH------HhCCCE-----EeCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHHH
Confidence 99999999974210 000 011110 0111 1345667766666654322 12335555555555
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCC------------CCc-cCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDL------------SYA-VEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~------------~~~-~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
++. |...+.|.++ +.... ... ....+.+. ..+.+..++.+++++++++||+|.-..
T Consensus 133 r~~------~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 133 RNP------WLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDV-NPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred hCH------HHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCC-CHHHHHHHHHHhCCCEEEECcccCcce
Confidence 431 2233333333 21100 000 00001111 145788899999999999999998653
No 37
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.83 E-value=1.6e-08 Score=96.05 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=35.4
Q ss_pred CCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhh---cCCCEEEccCCCCCC
Q 010191 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIASGNHERD 372 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~---~~vP~~~v~GNHE~~ 372 (515)
.+||+|+++||+++.+.. ..+|.+.++.+.++. ..+|++.++||||.+
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 479999999999976543 334555554554443 369999999999986
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.80 E-value=1.1e-07 Score=93.17 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
+|++++||+|.... . ... +.++. .+||+|+++||++... .++.+.++.+ ..|++++.
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23333 5799999999998421 1233334333 47999999
Q ss_pred CCCCCCC
Q 010191 367 GNHERDW 373 (515)
Q Consensus 367 GNHE~~~ 373 (515)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
No 39
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.77 E-value=4.2e-08 Score=93.61 Aligned_cols=179 Identities=18% Similarity=0.256 Sum_probs=89.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHH-------------------
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd------------------- 347 (515)
=++++++|.+-. ...++.+..++.+ ..+|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~------------~e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGD------------FELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-------------HHHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchH------------HHHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 378999998532 1123444444554 58999999999997766666776
Q ss_pred -------HHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEE
Q 010191 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420 (515)
Q Consensus 348 -------~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 420 (515)
.|++.+..+ .+|.+++|||||.... .|+. .++......|.--.-..-+.+--|.+.++.
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~~---~~lr---------~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G 138 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPER---FFLR---------EAYNAEIVTPHIHNVHESFFFWKGEYLVAG 138 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SHH---HHHH---------HHHHCCCC-TTEEE-CTCEEEETTTEEEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchHH---HHHH---------HHhccceeccceeeeeeeecccCCcEEEEe
Confidence 666666644 8999999999996310 0000 011100001110000000223334466776
Q ss_pred EcCCCC---cCC------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC
Q 010191 421 ADTEQD---WRE------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491 (515)
Q Consensus 421 Ldt~~~---~~~------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~ 491 (515)
+-.+-. ... -....+|..+.|..+ ++. -+|++.|.|+-+..+. ...+.+.+..++.+|+
T Consensus 139 ~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el--k~~-r~IlLfhtpPd~~kg~---------~h~GS~~V~dlIk~~~ 206 (255)
T PF14582_consen 139 MGGEITDDQREEEFKLRYPAWEAEYSLKFLREL--KDY-RKILLFHTPPDLHKGL---------IHVGSAAVRDLIKTYN 206 (255)
T ss_dssp E-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC--TSS-EEEEEESS-BTBCTCT---------BTTSBHHHHHHHHHH-
T ss_pred cCccccCCCccccccccchHHHHHHHHHHHHhc--ccc-cEEEEEecCCccCCCc---------ccccHHHHHHHHHhcC
Confidence 654421 000 122445556666665 233 4788899987111110 1224668999999999
Q ss_pred CeEEEeCcccccc
Q 010191 492 VDIAVFGHVHNYE 504 (515)
Q Consensus 492 VdlvlsGH~H~Ye 504 (515)
.++||+||+|--.
T Consensus 207 P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 207 PDIVLCGHIHESH 219 (255)
T ss_dssp -SEEEE-SSS-EE
T ss_pred CcEEEecccccch
Confidence 9999999999754
No 40
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.73 E-value=6.3e-08 Score=88.81 Aligned_cols=184 Identities=16% Similarity=0.212 Sum_probs=94.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
++.+++|+|...... .+...|.++...--++|.++ ...-|.|++.|||+.+..-+.. ..=++.+..+-. --+
T Consensus 2 ~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~LPG--~K~ 77 (230)
T COG1768 2 RIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-EEDLRFIGDLPG--TKY 77 (230)
T ss_pred ceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhh-hhhhhhhhcCCC--cEE
Confidence 466777777654321 23333444333222333332 3446899999999988654321 112333433311 247
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEc---CC-CCcCCCHHHH-----
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIAD---TE-QDWREGTEQY----- 434 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ld---t~-~~~~~g~~Q~----- 434 (515)
++.||||+.|+.....-+.. | ...|.+ + -.|.++++.++..- +. .++.+-++|-
T Consensus 78 m~rGNHDYWw~s~skl~n~l--------p-~~l~~~--n------~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~ 140 (230)
T COG1768 78 MIRGNHDYWWSSISKLNNAL--------P-PILFYL--N------NGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFL 140 (230)
T ss_pred EEecCCccccchHHHHHhhc--------C-chHhhh--c------cceeEeeEEEEEeecccCCCCCcCccchhHHHHHH
Confidence 89999999875221000000 0 000111 0 12455554444321 11 2232233332
Q ss_pred ---HHHHH-HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 435 ---RFIEH-CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 435 ---~WL~~-~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.-|+. ..+++. +...-.||+.|.|+ ++... . ...+..++++++|+.++.||.|--.|-
T Consensus 141 RE~~RLrlsa~a~l~-k~~~~fivM~HYPP-~s~~~---t---------~~~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 141 REIGRLRLSADAALP-KGVSKFIVMTHYPP-FSDDG---T---------PGPFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred HHHHHHHHHHHHhcc-cCcCeEEEEEecCC-CCCCC---C---------CcchHHHHhhcceeeEEeeeccCCCCC
Confidence 22333 222332 33344899999998 66531 1 225667788999999999999988764
No 41
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.71 E-value=1.2e-07 Score=87.58 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=39.2
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCC--chhHHHHHHHHHhhhhc---CCCEEEccCCCCCC
Q 010191 316 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIASGNHERD 372 (515)
Q Consensus 316 ~~~~l~~~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l~~---~vP~~~v~GNHE~~ 372 (515)
.++++++. .+||+|+++||+++... ...+|..+...+..+.+ .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34445544 58999999999996532 23456665555555433 58999999999984
No 42
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.70 E-value=1e-07 Score=85.02 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=34.6
Q ss_pred EEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccc
Q 010191 452 LIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (515)
Q Consensus 452 iIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 507 (515)
.|++.|+|+ +.... ... . ...+.+.+..++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 578888887 54321 111 1 11236788889999999999999999876654
No 43
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.67 E-value=6.5e-08 Score=90.61 Aligned_cols=57 Identities=19% Similarity=0.460 Sum_probs=40.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhhc-------CCCEEEccCCCCCC
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS-------TVPYMIASGNHERD 372 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~-------~vP~~~v~GNHE~~ 372 (515)
+++.++++. .+||+|+++||+++.... ..+|.+..+.++.+.. .+|++.++||||..
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555553 689999999999965432 2456666655555432 68999999999985
No 44
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.63 E-value=3.8e-07 Score=97.87 Aligned_cols=176 Identities=17% Similarity=0.234 Sum_probs=101.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCc----h---hHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCC
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGG 387 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~---~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgg 387 (515)
.+++.|.+..+++|+|++.||++-.+.. + .......+.+......+|+++++||||.-..+. |-.+.-+ .
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~--F~~~~~~-~ 275 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL--FAPGSVP-K 275 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh--cCCCCCc-c
Confidence 3455555555569999999999954421 1 112234455666677999999999999854321 1000000 0
Q ss_pred ccccc--ccce-----eccCCCC-----CCceEEEEEeCCEEEEEEcCCCCcC----------CCHHHHHHHHHHHhccc
Q 010191 388 ECGVL--VENM-----FYVPTEN-----RAKFWYSTDYGMFRFCIADTEQDWR----------EGTEQYRFIEHCLASVD 445 (515)
Q Consensus 388 e~g~~--~~~~-----f~~P~~~-----~~~~~Ysfd~G~v~fi~Ldt~~~~~----------~g~~Q~~WL~~~La~~~ 445 (515)
..... |... -.+|.+. .+.+|-..-+++.++|+||+..-+. .-.+|++|+..+|.++.
T Consensus 276 ~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae 355 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE 355 (577)
T ss_pred hhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH
Confidence 00000 0000 0123221 2333434456889999999975321 23688999999999876
Q ss_pred CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC--CeEEEeCcccccc
Q 010191 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYE 504 (515)
Q Consensus 446 r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~Ye 504 (515)
.+... +=+++|.|++- . ...+ +....+-.++.++. +.-.|.||.|.-+
T Consensus 356 ~~Gek-Vhil~HIPpG~-~--------~c~~-~ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 356 SAGEK-VHILGHIPPGD-G--------VCLE-GWSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred hcCCE-EEEEEeeCCCC-c--------chhh-hhhHHHHHHHHHHHHhhhhhccccCccee
Confidence 44444 77889999821 1 1111 11345555666652 5567999999866
No 45
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.60 E-value=1.4e-07 Score=92.04 Aligned_cols=103 Identities=18% Similarity=0.218 Sum_probs=60.4
Q ss_pred CCCCEEEEcCccccCCCc---------------------hhHH----HHH--HHHHhhhhcCCCEEEccCCCCCCCCCCC
Q 010191 325 KNIDIVFHIGDICYANGY---------------------ISQW----DQF--TAQIEPIASTVPYMIASGNHERDWPGTG 377 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~---------------------~~~w----d~f--~~~i~~l~~~vP~~~v~GNHE~~~~~~g 377 (515)
.++|++||+||.+|++.. ...+ ..+ ...++.+.+++|++.++.+||+..+..+
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 689999999999998742 1111 111 1235667789999999999999744322
Q ss_pred CCCCCCCCCCc--cc----ccccceeccCCC-----CCCceEEEEEeCCE-EEEEEcCCCCc
Q 010191 378 SFYGNMDSGGE--CG----VLVENMFYVPTE-----NRAKFWYSTDYGMF-RFCIADTEQDW 427 (515)
Q Consensus 378 ~~y~~~dsgge--~g----~~~~~~f~~P~~-----~~~~~~Ysfd~G~v-~fi~Ldt~~~~ 427 (515)
..-....+... .. ..|......+.. .....|++|.+|.. .|++||++...
T Consensus 108 ~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 108 DGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred ccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc
Confidence 10000000000 00 011111111111 23568999999996 99999998754
No 46
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.58 E-value=1.4e-06 Score=83.55 Aligned_cols=177 Identities=19% Similarity=0.300 Sum_probs=99.8
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhh-cCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~-~~vP~~ 363 (515)
.+|++++.|+|.... +...+..++++ .++|+++.+|||+|.. +...+-.+-. .++.+. ..+|++
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~~~~~~~-~~e~l~~~~~~v~ 68 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKEVAEELN-KLEALKELGIPVL 68 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchHHHHhhh-HHHHHHhcCCeEE
Confidence 379999999986431 22333333333 4899999999999432 1111111110 044444 489999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC------CcCCCH-HHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ------DWREGT-EQYRF 436 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~------~~~~g~-~Q~~W 436 (515)
+++||-|-..-.. ... . .++.. .+ -+.+.|++.|+.+-... .+...+ +-+.-
T Consensus 69 avpGNcD~~~v~~-~l~----~---~~~~v-----------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~ 127 (226)
T COG2129 69 AVPGNCDPPEVID-VLK----N---AGVNV-----------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSK 127 (226)
T ss_pred EEcCCCChHHHHH-HHH----h---ccccc-----------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHH
Confidence 9999987531000 000 0 00000 00 34667777777632111 111222 33344
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
|++-+.+.+ .+-.|++.|.|+ |..... . ... ....|.+.+..++++.++.+.++||.|-+.
T Consensus 128 l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~-~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 128 LKSLVKKAD---NPVNILLTHAPP-YGTLLD-T-PSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHhccc---CcceEEEecCCC-CCcccc-C-CCC-ccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 555555542 121399999999 876432 1 111 134567899999999999999999999754
No 47
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.57 E-value=6.1e-07 Score=82.63 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=42.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|+++++|+|.... ..+.+.++++...++|.|+++||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 37999999995421 23344455554348999999999981 1233333333 45899999
Q ss_pred CCCCC
Q 010191 367 GNHER 371 (515)
Q Consensus 367 GNHE~ 371 (515)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
No 48
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.55 E-value=3.2e-07 Score=83.94 Aligned_cols=59 Identities=17% Similarity=0.413 Sum_probs=42.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 367 (515)
|++++||+|.. ...++++++...++|.|+++||+++...... +....|++.+.|
T Consensus 1 ~i~~isD~H~~---------------~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGS---------------LELLEKALELFGDVDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhcCCCEEEECCccccccccch-----------hhcCCcEEEEeC
Confidence 58999999853 2355666666556999999999995433211 344679999999
Q ss_pred CCCCC
Q 010191 368 NHERD 372 (515)
Q Consensus 368 NHE~~ 372 (515)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99974
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.54 E-value=8.1e-07 Score=87.19 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=46.4
Q ss_pred EEEeecCCCCCCCCCcccccccCcHH-HHHHHHHhcCCCCEEEEcCccccC----CCchhHHHHHHHHHhhhhc-CCCEE
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLN-TTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~-~~~~l~~~~~~pDfVl~~GDi~y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 363 (515)
++++|+|.+... +...+ .++.+.+...+||+|+++||+++. .......+.+.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987531 11112 233333322479999999999962 1112223445555666654 58999
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
+++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
No 50
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.46 E-value=1.5e-06 Score=86.11 Aligned_cols=196 Identities=15% Similarity=0.065 Sum_probs=91.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
++|+.++|+|....+ . -+.+....+..++++. .++| +++..||++..... ..+......++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhcCCCE
Confidence 479999999943210 0 0112334445554442 3577 78999999954432 21222222222222222456
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccC----CCCCCceEEEEEeCCEE--EEEEcCCCCcC---C----
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVP----TENRAKFWYSTDYGMFR--FCIADTEQDWR---E---- 429 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P----~~~~~~~~Ysfd~G~v~--fi~Ldt~~~~~---~---- 429 (515)
+++||||+++...+ +-.... +.+.++. .....- .......|--++.++++ |+.+.+..... +
T Consensus 74 ~~~GNHe~d~g~~~-l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 74 VTIGNHEFDYGLDA-LAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred EeeccccccccHHH-HHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 77899998742210 000000 0001110 000000 00012234566778754 45554432110 0
Q ss_pred ---CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 430 ---GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 430 ---g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
-....+-+++..+.. +.+...+|++.|.+. .. . + .+...+ .+||++|+||.|.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~-~~--------------~-~-~la~~~--~giDlvlggH~H~~~~~ 209 (252)
T cd00845 150 GLPFEDLAEAVAVAEELL-AEGADVIILLSHLGL-DD--------------D-E-ELAEEV--PGIDVILGGHTHHLLEE 209 (252)
T ss_pred CceecCHHHHHHHHHHHH-hCCCCEEEEEeccCc-cc--------------h-H-HHHhcC--CCccEEEcCCcCcccCC
Confidence 011223343322221 245677999999886 11 0 1 222212 68999999999997764
Q ss_pred ccccCCc
Q 010191 507 CPIYQWH 513 (515)
Q Consensus 507 ~p~~~~~ 513 (515)
-..++++
T Consensus 210 ~~~~~~~ 216 (252)
T cd00845 210 PEVVNGT 216 (252)
T ss_pred CcccCCE
Confidence 3244443
No 51
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.46 E-value=7.7e-07 Score=84.48 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=33.1
Q ss_pred cCCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhh--------------------cCCCEEEccCCCCCCC
Q 010191 324 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 373 (515)
Q Consensus 324 ~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~--------------------~~vP~~~v~GNHE~~~ 373 (515)
.-+||.|+++||+... +. .++|.+..+....+. ..+|++.++||||...
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3689999999999943 43 345544333332222 1489999999999963
No 52
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.38 E-value=1.3e-06 Score=92.44 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=51.6
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhh-------
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 355 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~------- 355 (515)
.+||++++|+|.+.... .. ........+++++++. .+++|+||++||+.+.... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~--~~-~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGEN--DP-VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccC--Cc-hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 48999999999874310 00 0111234455665543 2689999999999965432 1222233344432
Q ss_pred -----h----------------------hcCCCEEEccCCCCCC
Q 010191 356 -----I----------------------ASTVPYMIASGNHERD 372 (515)
Q Consensus 356 -----l----------------------~~~vP~~~v~GNHE~~ 372 (515)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1379999999999974
No 53
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.30 E-value=1.4e-05 Score=75.45 Aligned_cols=65 Identities=17% Similarity=0.334 Sum_probs=42.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 367 (515)
+++++||+|.+... ......+.+++++ .++|.|+|+||+++ .+..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~---------~~~~~~~~~~~~~-~~~d~iih~GDi~~--------~~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRA---------SDLPAKFKKLLVP-GKIQHVLCTGNLCS--------KETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCc---------hhhHHHHHHHhcc-CCCCEEEECCCCCC--------HHHHHHHHhh--CCceEEEEC
Confidence 47899999965431 1122345555554 57999999999984 1222333333 247999999
Q ss_pred CCCCC
Q 010191 368 NHERD 372 (515)
Q Consensus 368 NHE~~ 372 (515)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
No 54
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.30 E-value=6.4e-06 Score=82.22 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=89.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHH---HHHHHHHhhhhcCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~w---d~f~~~i~~l~~~v 360 (515)
++++.++|+|.-... ... +.+....+..++++. ++++ +++.+||+...... ..+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~---~~~--~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPL---DGG--PVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeeccc---CCC--CcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcCCccHHHHHHhc--CC
Confidence 478999999832211 001 112334455555442 4577 99999999954322 112 1222233322 22
Q ss_pred CEEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCCC-C---CCceEEEEEeCCEE--EEEEcCCCCc------
Q 010191 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTE-N---RAKFWYSTDYGMFR--FCIADTEQDW------ 427 (515)
Q Consensus 361 P~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~~-~---~~~~~Ysfd~G~v~--fi~Ldt~~~~------ 427 (515)
-+.++||||+++... .+... -.+.+.++- ........ . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~--~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKR--LGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHH--HhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 366899999864211 00000 000111111 00101111 0 12457778888854 5555544311
Q ss_pred CCC---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 428 REG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 428 ~~g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
..+ .+-.+.+++.++...+.+..-+|++.|-+. . +. + .+...+ .+||++|.||.|...
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-------------~d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-------------ND--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-------------hh--H-HHHHhC--CCCceEEecccceeE
Confidence 000 122233444333322246777999999875 1 00 1 222222 589999999999876
No 55
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.29 E-value=1.7e-05 Score=79.35 Aligned_cols=167 Identities=19% Similarity=0.256 Sum_probs=88.6
Q ss_pred CCCCEEEEcCccccCCCch-----------hHHHHHHHHHhhhh-cCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccc
Q 010191 325 KNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPIA-STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVL 392 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~~-----------~~wd~f~~~i~~l~-~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~ 392 (515)
.++|+||++||+.-..... ..+..|.+.++... ..+|.+++.||||.. .++.....|++.
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v--- 98 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEAS-----NYLWELPYGGWV--- 98 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCH-----HHHHhhcCCCee---
Confidence 4699999999996332111 12333444443322 467789999999952 111111111211
Q ss_pred ccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC---cC--------CCHHHHHHHH-------HHHhcccCCCCCEEEE
Q 010191 393 VENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD---WR--------EGTEQYRFIE-------HCLASVDRQKQPWLIF 454 (515)
Q Consensus 393 ~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---~~--------~g~~Q~~WL~-------~~La~~~r~~~pwiIv 454 (515)
....+.+-. ...+++++++|..|..... +. ....+...+. +.|... +.+--|+
T Consensus 99 ~~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIl 169 (262)
T cd00844 99 APNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIF 169 (262)
T ss_pred cCcEEEecC------CCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEE
Confidence 011122211 1245678999999886321 11 1122322211 112221 1122599
Q ss_pred EeccCCcCCCCCCCccC-------CCC-----CchhhHHHHHHHHHhcCCeEEEeCcccc-cccccccc
Q 010191 455 LAHRVLGYSSDLSYAVE-------GSF-----AEPMGRESLQKLWQKYKVDIAVFGHVHN-YERICPIY 510 (515)
Q Consensus 455 ~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~Ll~k~~VdlvlsGH~H~-YeRt~p~~ 510 (515)
+.|.|+ +.-... +.. ..+ ....|...+..|+++.+.+..|+||.|. |++..|-.
T Consensus 170 LSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~~ 236 (262)
T cd00844 170 LSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPHE 236 (262)
T ss_pred EeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCCc
Confidence 999988 543221 110 000 0123567889999999999999999999 77665543
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.29 E-value=1.5e-05 Score=80.24 Aligned_cols=199 Identities=16% Similarity=0.119 Sum_probs=92.2
Q ss_pred eEEEEEeecCCCCCCC-CCcccccccCcHHHHHHHHHhc--CCCCEEEE-cCccccCCCchhHHH---------HHHHHH
Q 010191 287 QQVIIFGDMGKDEADG-SNEYNNFQRGSLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 353 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g-~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~-~GDi~y~~g~~~~wd---------~f~~~i 353 (515)
++|+.++|+|..-... ...-..-..+....+..++++. .++|.+++ +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999998542110 0000000112334445555432 35777766 999995432 12221 122333
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC--CCCCceEEEEEeC-CEEE--EEEcCCCC-
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYG-MFRF--CIADTEQD- 426 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G-~v~f--i~Ldt~~~- 426 (515)
..+ .. -+.++||||+++... .+... -.+.+.++- ....... ......|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~-d~~~lGNHe~d~g~~--~l~~~--~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GY-DAGTLGNHEFNYGLD--YLDKV--IKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CC-CEEeecccCcccCHH--HHHHH--HHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 332 33 366789999875211 00000 000001110 0000000 0112345667888 7554 44433321
Q ss_pred -c-----------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCe
Q 010191 427 -W-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVD 493 (515)
Q Consensus 427 -~-----------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vd 493 (515)
+ ....+..++..+.|++ .+...+|+++|-.. ..... .... .+.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~----~~~~----~~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE----ESLT----GENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc----cccC----CccHHHHHHhcCCCCc
Confidence 0 0112234444445544 35678999999886 21100 0000 02223344444 6899
Q ss_pred EEEeCccccccc
Q 010191 494 IAVFGHVHNYER 505 (515)
Q Consensus 494 lvlsGH~H~YeR 505 (515)
++|.||.|....
T Consensus 221 ~IlgGHsH~~~~ 232 (277)
T cd07410 221 AILTGHQHRRFP 232 (277)
T ss_pred EEEeCCCccccc
Confidence 999999998654
No 57
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.21 E-value=3.5e-06 Score=81.27 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=45.4
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCC-----CchhHHHHH-HHHHhhhhcCCC
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 361 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~-----g~~~~wd~f-~~~i~~l~~~vP 361 (515)
++++|+|.+.... ........+.... .++|.++++||+.+.- ......... ...++.....++
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999876421 1122333333322 4899999999999631 111112222 334444566899
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
No 58
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.15 E-value=5.3e-06 Score=80.17 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=42.9
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----------CCCCEEEEcCccccCCCchhHHHHHHHHHhh--hh
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEP--IA 357 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~--l~ 357 (515)
+++||+|. ....++++++.. .+.|.++++||+++.+....+--+++..+.. ..
T Consensus 1 ~vi~DIHG---------------~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~ 65 (208)
T cd07425 1 VAIGDLHG---------------DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAK 65 (208)
T ss_pred CEEeCccC---------------CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHh
Confidence 47899964 345777777653 2579999999999543332221122222211 12
Q ss_pred cCCCEEEccCCCCCC
Q 010191 358 STVPYMIASGNHERD 372 (515)
Q Consensus 358 ~~vP~~~v~GNHE~~ 372 (515)
...+++++.||||..
T Consensus 66 ~~~~v~~l~GNHE~~ 80 (208)
T cd07425 66 AGGKVHFLLGNHELM 80 (208)
T ss_pred cCCeEEEeeCCCcHH
Confidence 357899999999974
No 59
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.07 E-value=6.2e-05 Score=75.39 Aligned_cols=190 Identities=12% Similarity=0.080 Sum_probs=89.6
Q ss_pred eEEEEEeecCCCCCCCC---------CcccccccCcHHHHHHHHHhc--C-CCCEE-EEcCccccCCCchhHHHHHHHHH
Q 010191 287 QQVIIFGDMGKDEADGS---------NEYNNFQRGSLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 353 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~---------~~y~~~~~~~~~~~~~l~~~~--~-~pDfV-l~~GDi~y~~g~~~~wd~f~~~i 353 (515)
++|+.++|+|..-.+.. ..+.. .+-...+..++++. . ++|.+ +.+||+...... ..+.... .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~--~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGM--AGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccc--cCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46888888876432110 01111 12344555555542 3 78877 579999954432 2222111 22
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC--CCCCceEEEEEeCC--EEEEEEcCCCCcC
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYGM--FRFCIADTEQDWR 428 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G~--v~fi~Ldt~~~~~ 428 (515)
-.++..+++.++.||||++....+ +... -.+.+.++- ....... ...-+.|.-++.++ +-+|.+.+.....
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~~--l~~~--~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPER--VREL--FGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHHH--HHHH--HhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 223334666666699998742110 0000 000011110 0000000 00112355578888 4556665542110
Q ss_pred --C--------CHHHHHHHHHHHhccc-CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 010191 429 --E--------GTEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (515)
Q Consensus 429 --~--------g~~Q~~WL~~~La~~~-r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vdlvl 496 (515)
+ .....+.+++.+++.. ..+...+|++.|-+. .. . + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-H---HHhcCCCCcEEE
Confidence 0 0123344544433321 145678999999775 10 0 1 1 2222 6799999
Q ss_pred eCcccccc
Q 010191 497 FGHVHNYE 504 (515)
Q Consensus 497 sGH~H~Ye 504 (515)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999753
No 60
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.04 E-value=0.00014 Score=72.45 Aligned_cols=185 Identities=16% Similarity=0.163 Sum_probs=92.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
|++++||.=-.. |. ......+.++.++ .++||++..||.+-.. +.. ....+.+..+ .+- .++.
T Consensus 1 ~ilfigdi~g~~--G~-------~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~~--G~D-~iTl 64 (255)
T cd07382 1 KILFIGDIVGKP--GR-------KAVKEHLPKLKKE-YKIDFVIANGENAAGGKGIT---PKIAKELLSA--GVD-VITM 64 (255)
T ss_pred CEEEEEeCCCHH--HH-------HHHHHHHHHHHHH-CCCCEEEECCccccCCCCCC---HHHHHHHHhc--CCC-EEEe
Confidence 588999982110 00 0012334444433 4699999999998433 222 1222222222 333 4555
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcC--CCCcCCCHHHHHHHHHHHhcc
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADT--EQDWREGTEQYRFIEHCLASV 444 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~g~~Q~~WL~~~La~~ 444 (515)
||||++...--.+++..+ .+.. --++|.......|.-++.+++++-+++- ......-..-++-+++.+++.
T Consensus 65 GNH~fD~gel~~~l~~~~------~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~l 137 (255)
T cd07382 65 GNHTWDKKEILDFIDEEP------RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEEL 137 (255)
T ss_pred cccccCcchHHHHHhcCc------CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHH
Confidence 999998542111111100 0010 0122222224457778888876655543 221111122233456666655
Q ss_pred cCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccccc-CCc
Q 010191 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIY-QWH 513 (515)
Q Consensus 445 ~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~-~~~ 513 (515)
.. +...+||.+|--. ++ + ..++.. ...-+||+++.||+|..---.-+. +++
T Consensus 138 k~-~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d~~il~~gT 189 (255)
T cd07382 138 KE-EADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTADERILPGGT 189 (255)
T ss_pred hc-CCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCccEEeeCCe
Confidence 42 5678999999642 11 1 223332 223469999999999975444333 443
No 61
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.03 E-value=1.1e-05 Score=80.40 Aligned_cols=83 Identities=16% Similarity=0.239 Sum_probs=50.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCch-hHHHHHHHHHhhhhc-C-CC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~-~-vP 361 (515)
+||++++|+|.+..-.... .. ......++++++. .+++|+|+++||+.+..... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 4899999999875421100 00 0012234444432 25799999999999754322 222334455555543 3 89
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
No 62
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.00 E-value=0.00016 Score=73.33 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=42.4
Q ss_pred eEEEEEeecCCCCCCCCCcc-cccccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEY-NNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y-~~~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
++++.++|+|..-... .+ ..-+.+....+..++++. ..+ .+++..||+.......+.+..-...++ ++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~--~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~-~~n~~g~ 77 (288)
T cd07412 1 VQILAINDFHGRLEPP--GKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIE-ALNAMGV 77 (288)
T ss_pred CeEEEEeccccCccCC--CCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHH-HHHhhCC
Confidence 4789999998432110 00 000112344455555542 234 489999999954333222111011122 2223333
Q ss_pred -EEccCCCCCCC
Q 010191 363 -MIASGNHERDW 373 (515)
Q Consensus 363 -~~v~GNHE~~~ 373 (515)
++++||||+++
T Consensus 78 Da~t~GNHefd~ 89 (288)
T cd07412 78 DASAVGNHEFDE 89 (288)
T ss_pred eeeeeccccccc
Confidence 57789999975
No 63
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.99 E-value=0.00013 Score=72.75 Aligned_cols=196 Identities=15% Similarity=0.129 Sum_probs=88.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-CCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~ 363 (515)
++++.++|+|..-..... +.+....+..++++.. +.++++.+||+..... ...+..-...++.+.. ..-+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 479999999864321000 1122334455554422 5789999999985422 1111111122222222 3344
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCCCC--CCceEEEEEeC-C--EEEEEEcCCCC--c-CC----C
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTEN--RAKFWYSTDYG-M--FRFCIADTEQD--W-RE----G 430 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~~~--~~~~~Ysfd~G-~--v~fi~Ldt~~~--~-~~----g 430 (515)
.++||||+++.... +-... .+.+.|+- ........+ .-..|.-++.+ + |-|+.+-+... . .+ +
T Consensus 74 ~~~GNHefd~G~~~-l~~~~---~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 74 VTPGNHEFDYGLDR-LKELS---KEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred EccccccccCCHHH-HHHHH---hhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 56899999742110 00000 00001110 000000000 01224455676 5 55666655421 0 00 0
Q ss_pred ---HHHHHHHHHH-HhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 431 ---TEQYRFIEHC-LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 431 ---~~Q~~WL~~~-La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.+-.+-+++. .....+.+..-+|++.|.+..+... . .. ...+.. .-.+||++|.||.|.....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~-------~---~~-~~~la~--~~~giDvIigGH~H~~~~~ 216 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS-------P---WT-STELAA--NVTGIDLIIDGHSHTTIEI 216 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC-------C---cc-HHHHHH--hCCCceEEEeCCCcccccC
Confidence 0112223333 2222224677899999988622110 0 01 112222 2258999999999997654
No 64
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.90 E-value=0.00023 Score=72.19 Aligned_cols=52 Identities=17% Similarity=0.170 Sum_probs=29.9
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
.+..-+|++.|-.. +... ..... .+. ...+...+...+||++|.||.|....
T Consensus 172 ~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 172 EKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred cCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 35677999999875 3211 00100 011 22333333346899999999998663
No 65
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.89 E-value=2.3e-05 Score=82.87 Aligned_cols=84 Identities=15% Similarity=0.268 Sum_probs=52.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhhhh-cCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIA-STVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~l~-~~vP~ 362 (515)
+||++++|+|.+... .+..... ......+.++++. ..++||||++||+.+.+.. ...-..+.+.++.+. .++|+
T Consensus 1 mkilHtSD~HLG~~~-~~~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQ-LNLPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhh-ccCccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 489999999998321 1111111 1122344444433 2579999999999965432 222234556666554 48999
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+++.||||..
T Consensus 79 ~~I~GNHD~~ 88 (390)
T COG0420 79 VVIAGNHDSP 88 (390)
T ss_pred EEecCCCCch
Confidence 9999999974
No 66
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=97.86 E-value=8.6e-05 Score=77.56 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=73.6
Q ss_pred CCceEEEEEeecCCCCCCCCCccccccc--CcHHHHHHHHH---hcCCCCEEEEcCccccCCC--chhHHHHHHHHHhhh
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQ---DLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPI 356 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~--~~~~~~~~l~~---~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l 356 (515)
+..+|+++++|.|.-...+...+..+-. ++-.-+.+... ..-+||.++++||+.+.+. ..++|.+..+.++.+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 4569999999999865321111110000 00001112111 1358999999999996432 256777665556665
Q ss_pred hc---CCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC
Q 010191 357 AS---TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD 426 (515)
Q Consensus 357 ~~---~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~ 426 (515)
.. .+|++.++||||.+.... .-.....||.-- -++...+|+.|++.|+++|++.-
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~~---fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFESV---FGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred hCCCCCCeeEEeCCccccccccc------------cchhHHHHHHHh---hcchhhhhccCCceeEEeeehhh
Confidence 53 799999999999963210 000111222100 01234579999999999998863
No 67
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.86 E-value=0.00032 Score=71.01 Aligned_cols=199 Identities=13% Similarity=0.110 Sum_probs=91.0
Q ss_pred ceEEEEEeecCCCCCCCCCccccc--c-cCcHHHHHHHHHh--cCCCC-EEEEcCccccCCCchhHHH-HHHHHHhhhhc
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNF--Q-RGSLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 358 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~--~-~~~~~~~~~l~~~--~~~pD-fVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~ 358 (515)
.++|+.++|+|..-.. ....... . .+....++++.+. .++++ +++.+||+...... .... .--+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~~-~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~-~~~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLGG-HLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL-SDASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCcC-cCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec-eeeecCCChHHHHHHH
Confidence 4899999999953211 0000000 0 0111222333221 13455 67889999954322 1111 00122333444
Q ss_pred CCCE-EEccCCCCCCCCCCC-CCCCCCCCCCccccccc-ceeccCCC--C---CCceEEEEEeC-CEE--EEEEcCCCC-
Q 010191 359 TVPY-MIASGNHERDWPGTG-SFYGNMDSGGECGVLVE-NMFYVPTE--N---RAKFWYSTDYG-MFR--FCIADTEQD- 426 (515)
Q Consensus 359 ~vP~-~~v~GNHE~~~~~~g-~~y~~~dsgge~g~~~~-~~f~~P~~--~---~~~~~Ysfd~G-~v~--fi~Ldt~~~- 426 (515)
.++| .+++||||++....+ ..+... ..+...|+- ........ . ....|.-++.+ +++ +|.+-+...
T Consensus 83 ~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 83 MMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred hcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 5665 678999999742211 000000 000001110 00100000 0 11235566765 644 566654421
Q ss_pred ------cCCC--HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCe-EEE
Q 010191 427 ------WREG--TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVD-IAV 496 (515)
Q Consensus 427 ------~~~g--~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~Vd-lvl 496 (515)
+... ..+.+|+.+.|++ .+..-+|++.|... .. +.. . .+....+.++. ++| ++|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~~----~-~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DAE----F-KVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Ccc----H-HHHHHHHHHhCCCCCEEEE
Confidence 1111 2233488877874 35677999999874 21 111 0 11122233343 577 799
Q ss_pred eCcccccc
Q 010191 497 FGHVHNYE 504 (515)
Q Consensus 497 sGH~H~Ye 504 (515)
.||.|...
T Consensus 225 ~GHsH~~~ 232 (282)
T cd07407 225 GGHSHVRD 232 (282)
T ss_pred eCCccccc
Confidence 99999753
No 68
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.84 E-value=3.7e-05 Score=79.94 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=49.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-chhHHHHHHHH--Hhhhh-cCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 360 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~--i~~l~-~~v 360 (515)
+||++++|+|.+..... .+ ........++++++. ..++|+|+++||+..... ....-..+... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~-~~--~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-PW--FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCC-hh--hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999754211 00 011122344554432 268999999999996542 22111123322 33343 379
Q ss_pred CEEEccCCCCCC
Q 010191 361 PYMIASGNHERD 372 (515)
Q Consensus 361 P~~~v~GNHE~~ 372 (515)
|+++++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
No 69
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.82 E-value=4.2e-05 Score=81.30 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=47.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhH-HHHHHHHHhhhhc-CCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ-WDQFTAQIEPIAS-TVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~-wd~f~~~i~~l~~-~vP~ 362 (515)
+||++++|+|.+..-. ..... ......++++++. ..+||+|+++||+.+....... ...+.+.+..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~--~~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFY--SKSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCccc--CcccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 4899999999974310 00000 0011123333332 2689999999999964332211 1223333344432 6899
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
No 70
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.79 E-value=0.00056 Score=69.20 Aligned_cols=79 Identities=15% Similarity=0.053 Sum_probs=45.5
Q ss_pred eEEEEEeCCEE--EEEEcCCCCc---C--CC---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCc
Q 010191 407 FWYSTDYGMFR--FCIADTEQDW---R--EG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476 (515)
Q Consensus 407 ~~Ysfd~G~v~--fi~Ldt~~~~---~--~g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~ 476 (515)
.|.-++.++++ ||.+-+.... . .+ .+..+.+++.++++...+..-+|++.|-.. . +
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--------~------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--------E------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--------h------h
Confidence 35567888854 5555443210 0 11 233455666666554345777899999764 0 0
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 477 PMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 477 ~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
. + .+...+ .+||+++.||.|..-
T Consensus 197 d--~-~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-HHHHcC--CCCcEEEeCCcCccc
Confidence 0 1 222222 689999999999975
No 71
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.77 E-value=0.00096 Score=66.77 Aligned_cols=182 Identities=14% Similarity=0.093 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.|++++||.=-.. |. ....+.+.++.++ .++||++..||.+-.+ |... ...+.+.. ..+-++.+
T Consensus 1 m~ilfiGDi~G~~--Gr-------~~l~~~L~~lk~~-~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~~--~GvDviT~ 65 (266)
T TIGR00282 1 IKFLFIGDVYGKA--GR-------KIVKNNLPQLKSK-YQADLVIANGENTTHGKGLTL---KIYEFLKQ--SGVNYITM 65 (266)
T ss_pred CeEEEEEecCCHH--HH-------HHHHHHHHHHHHh-CCCCEEEEcCcccCCCCCCCH---HHHHHHHh--cCCCEEEc
Confidence 3799999983110 00 0011233444333 4799999999999432 2221 11222221 24555555
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC-CcC-C--CHHHHHHHHHHH
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ-DWR-E--GTEQYRFIEHCL 441 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~-~~~-~--g~~Q~~WL~~~L 441 (515)
|||+++... .+...+.. +. .....++|....+.-|..++.++.++-+++-.. .+. + ...-.+-+++.+
T Consensus 66 -GNH~~Dkge---~~~~i~~~--~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i 137 (266)
T TIGR00282 66 -GNHTWFQKL---ILDVVINQ--KD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELI 137 (266)
T ss_pred -cchhccCcH---HHHHHhcc--cc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHH
Confidence 999998542 11111110 10 011123343333444666788887766665321 111 1 111223355555
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPI 509 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~ 509 (515)
++.. .+++.+||.+|--- .. .+.....+.+-+|++|+.-|+|.-----.+
T Consensus 138 ~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i 187 (266)
T TIGR00282 138 NMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI 187 (266)
T ss_pred Hhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCCccee
Confidence 5543 24678999999542 01 345577788889999999999986543333
No 72
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.77 E-value=6.6e-05 Score=68.72 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=69.2
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE 394 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~ 394 (515)
..++.+.++...+|++|.+||+.-.+....+|..+..- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~------------------------ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP------------------------ 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC------------------------
Confidence 34444444456799999999999654443333333322 2234789999999986
Q ss_pred ceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccC-CC
Q 010191 395 NMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVE-GS 473 (515)
Q Consensus 395 ~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~-~~ 473 (515)
+.-|++.|.|+ +......... ..
T Consensus 69 -------------------------------------------------------~~DILlTh~wP-~gi~~~~~~~~~~ 92 (150)
T cd07380 69 -------------------------------------------------------GVDILLTSEWP-KGISKLSKVPFEE 92 (150)
T ss_pred -------------------------------------------------------CCCEEECCCCc-hhhhhhCCCcccc
Confidence 22478888877 5432110000 00
Q ss_pred CCchhhHHHHHHHHHhcCCeEEEeCccc-ccccc
Q 010191 474 FAEPMGRESLQKLWQKYKVDIAVFGHVH-NYERI 506 (515)
Q Consensus 474 ~~~~~~r~~l~~Ll~k~~VdlvlsGH~H-~YeRt 506 (515)
-....+...+..+.++.+..+.|+||.| .|||-
T Consensus 93 ~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~ 126 (150)
T cd07380 93 TLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126 (150)
T ss_pred cccCCCCHHHHHHHHHcCCCeEeecCCCceEeec
Confidence 0012246688889999999999999999 77764
No 73
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.67 E-value=0.00066 Score=81.49 Aligned_cols=196 Identities=16% Similarity=0.146 Sum_probs=90.3
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEE-cCccccCCCchhHHHHHHHHHhhhhcC
Q 010191 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYISQWDQFTAQIEPIAST 359 (515)
Q Consensus 283 ~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~-~GDi~y~~g~~~~wd~f~~~i~~l~~~ 359 (515)
+...++++.++|+|..- . ....+..++++ ..+++.+++ +||++..... ..+..-...++.+ ..
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~-----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~l-n~ 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-D-----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMM-KE 722 (1163)
T ss_pred CceEEEEEEEeecccCC-C-----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHH-hC
Confidence 33459999999999431 1 11223333332 146777655 9999854321 2111111222222 22
Q ss_pred CCE-EEccCCCCCCCCCCC--CCCCCCC--CC--C--ccccccc-ceeccCCCC----CCceEEEEEeCCE--EEEEEcC
Q 010191 360 VPY-MIASGNHERDWPGTG--SFYGNMD--SG--G--ECGVLVE-NMFYVPTEN----RAKFWYSTDYGMF--RFCIADT 423 (515)
Q Consensus 360 vP~-~~v~GNHE~~~~~~g--~~y~~~d--sg--g--e~g~~~~-~~f~~P~~~----~~~~~Ysfd~G~v--~fi~Ldt 423 (515)
+.+ ++++||||+++.... .+..... .. . ....|+- ........+ ....|.-++.+++ -||.+-+
T Consensus 723 lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 723 MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 333 669999999753210 0000000 00 0 0001110 111111111 1134666788884 4566654
Q ss_pred CCC---cCC----C---HHHHHHHHHHHhccc-CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cC
Q 010191 424 EQD---WRE----G---TEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YK 491 (515)
Q Consensus 424 ~~~---~~~----g---~~Q~~WL~~~La~~~-r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~ 491 (515)
... ..+ + .+..+.+++..++.. ..+...+|++.|... ... . ..+ ......|.++ .+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 001 0 122233444433332 145778999999875 211 0 001 1122334444 47
Q ss_pred CeEEEeCcccccc
Q 010191 492 VDIAVFGHVHNYE 504 (515)
Q Consensus 492 VdlvlsGH~H~Ye 504 (515)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999864
No 74
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.60 E-value=0.00089 Score=74.18 Aligned_cols=199 Identities=18% Similarity=0.130 Sum_probs=88.2
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc------CC-CCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~------~~-pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
...++|+.++|+|..-... .+. ..-...+..++++. .+ .-+++.+||+.... ....+..- ..+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~~---~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EYG---EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--ccC---CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 111 11122333333321 13 34888999998432 22211110 111112
Q ss_pred hcCCCE-EEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC--CCCCceEEEEEeCCEE--EEEEcCCCC--c-
Q 010191 357 ASTVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYGMFR--FCIADTEQD--W- 427 (515)
Q Consensus 357 ~~~vP~-~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~~--~- 427 (515)
+..+.+ ..++||||+++... .+.... .+...|+- ....... ...-..|.-++.++++ ||.+-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 222222 55679999986321 110000 01111111 0011111 0112346667888855 555544321 1
Q ss_pred CCC-------HHHHHHHHHHHhcccC-CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh---cCCeEEE
Q 010191 428 REG-------TEQYRFIEHCLASVDR-QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK---YKVDIAV 496 (515)
Q Consensus 428 ~~g-------~~Q~~WL~~~La~~~r-~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k---~~Vdlvl 496 (515)
.+. .+..+-+++.+++... .+..-+|++.|..+ ..... ....... . ..|.++ .+||++|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~~~~~~--d---~~la~~~~~~~IDvIl 250 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HGSNAPG--D---VEMARSLPAGGLDMIV 250 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cCCCCcc--H---HHHHHhCCccCceEEE
Confidence 010 1112223333333321 35777999999876 22110 0000000 1 233444 3799999
Q ss_pred eCccccc
Q 010191 497 FGHVHNY 503 (515)
Q Consensus 497 sGH~H~Y 503 (515)
.||.|.+
T Consensus 251 gGHsH~~ 257 (551)
T PRK09558 251 GGHSQDP 257 (551)
T ss_pred eCCCCcc
Confidence 9999975
No 75
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.51 E-value=0.00029 Score=68.45 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=46.9
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCchhHHHHHH----HHHhhhhc-CCCEE
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFT----AQIEPIAS-TVPYM 363 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~~~~wd~f~----~~i~~l~~-~vP~~ 363 (515)
++++|+|.++.. +.....+.+.++. ..+.|.++++||++..=--...|.+.. ..+..++. .+|++
T Consensus 1 lFISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 1 LFISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred CeeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 368999998431 3333455566654 234699999999996411112444443 33444444 59999
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||.-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999963
No 76
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.42 E-value=0.00089 Score=73.57 Aligned_cols=205 Identities=14% Similarity=0.131 Sum_probs=96.8
Q ss_pred CCCCCceEEEEEeecCCCCCCCCCccccccc--CcHHHHHHHHHh---cCCCCEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 281 PGQDSLQQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 281 ~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~--~~~~~~~~l~~~---~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
......++|+..+|+|..-.. ..|..... +....+..++++ ..+..++|.+||+......... ..-...+-.
T Consensus 21 ~~~~~~l~ilhtnD~H~~l~~--~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 21 AAETVKLTILHTNDLHGHLEP--YDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred ccCceeEEEEEecccccccee--ccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 334556999999999975431 11111111 122222333322 1235689999999965332211 110111222
Q ss_pred hhcCCCE-EEccCCCCCCCCCCCCCCCCCCCCCccccccc--ceeccCCC--CCCceEEEEEeCCE--EEEEEcCCC--C
Q 010191 356 IASTVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE--NMFYVPTE--NRAKFWYSTDYGMF--RFCIADTEQ--D 426 (515)
Q Consensus 356 l~~~vP~-~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~--~~f~~P~~--~~~~~~Ysfd~G~v--~fi~Ldt~~--~ 426 (515)
++..++| ..++||||++.... ++.. .-.+...|+. ..+.-+.. ..-+.|.-++.+++ -+|.+.+.. .
T Consensus 98 ~mN~m~yDa~tiGNHEFd~g~~--~l~~--~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 98 LLNALGYDAMTLGNHEFDYGLE--ALAR--LLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred HHhhcCCcEEeecccccccCHH--HHHH--HHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 2334444 78899999985321 0000 0000001110 00111111 11356778888884 456666422 1
Q ss_pred cCC--------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeC
Q 010191 427 WRE--------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFG 498 (515)
Q Consensus 427 ~~~--------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsG 498 (515)
+.. -....+++++.+.+...+...-+|++.|-+. ...... .... ... ..... .++|+++.|
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~--~~~--~~~~~-----~~iD~i~~G 242 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEV--PGD--VDVAV-----PGIDLIIGG 242 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-cccc--ccc--ccccc-----cCcceEecc
Confidence 111 1244566666666654333667999999886 222111 1000 000 11111 449999999
Q ss_pred ccccc
Q 010191 499 HVHNY 503 (515)
Q Consensus 499 H~H~Y 503 (515)
|.|.+
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99964
No 77
>PRK09453 phosphodiesterase; Provisional
Probab=97.42 E-value=0.00043 Score=65.22 Aligned_cols=71 Identities=13% Similarity=0.217 Sum_probs=43.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch-----hHHHHHHHHHhhhhcCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~-----~~wd~f~~~i~~l~~~vP 361 (515)
.|++++||+|.+. + ..+.+.+.+++ .++|.|+|+||+++..... ...++..+.++.+ ..+
T Consensus 1 mri~viSD~Hg~~-----------~-~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL-----------P-ATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH-----------H-HHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 3799999999431 1 22333333332 6899999999999532210 0122333334332 468
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++++.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999964
No 78
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.35 E-value=0.00035 Score=65.31 Aligned_cols=55 Identities=22% Similarity=0.279 Sum_probs=34.7
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCch-hHHHHHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 317 TRQLIQDLKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 317 ~~~l~~~~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
+.+++++ .+||.|+++||+.+..... .+..............+|++.+.||||..
T Consensus 33 l~~~~~~-~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 33 LDRLIEE-YGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHh-cCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 3334433 6899999999999654321 11111112233345689999999999975
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.28 E-value=0.00048 Score=68.03 Aligned_cols=76 Identities=13% Similarity=0.306 Sum_probs=47.5
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----CCCCEEEEcCccccCCC----c---------hhHHHHHHHH
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 352 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----~~pDfVl~~GDi~y~~g----~---------~~~wd~f~~~ 352 (515)
++++|+|.+... . .....+.+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 689999976421 0 011122333333322 25799999999996521 0 1224455666
Q ss_pred HhhhhcCCCEEEccCCCCCC
Q 010191 353 IEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 353 i~~l~~~vP~~~v~GNHE~~ 372 (515)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 77777789999999999974
No 80
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.22 E-value=0.00049 Score=64.10 Aligned_cols=77 Identities=14% Similarity=0.218 Sum_probs=42.9
Q ss_pred EEEeecCCCCCCCC----CcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 290 IIFGDMGKDEADGS----NEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 290 ~v~gD~g~~~~~g~----~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.+++|+|.+..... ..+...+......++++.+...++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 47889988764210 01111000011233334443567899999999996433 2222 2333332 4689999
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
.||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
No 81
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.17 E-value=0.00079 Score=65.90 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=50.9
Q ss_pred eEEEEEeecCCCCCCCCCccccccc--CcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~--~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
.+.++++|+|.+............+ ...++++++.+. ..++|.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 4588999999874210000000001 112345555442 257999999999997554434555555555544 3599
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999974
No 82
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.17 E-value=0.00099 Score=67.15 Aligned_cols=64 Identities=17% Similarity=0.315 Sum_probs=44.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+++++||+|. ....+++++++. ++.|.++++||+++ .|..+ .+..+.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG---------------~~~~l~~ll~~~~~~~~~D~li~lGDlVd-rGp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQG---------------CYDELQRLLEKIDFDPAKDTLWLVGDLVN-RGPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCC---------------CHHHHHHHHHhcCCCCCCCEEEEeCCccC-CCcCH--HHHHHHHHhc--CCCeEE
Confidence 5789999974 345677777764 46899999999995 44322 2333333333 346899
Q ss_pred ccCCCCC
Q 010191 365 ASGNHER 371 (515)
Q Consensus 365 v~GNHE~ 371 (515)
+.||||.
T Consensus 62 VlGNHD~ 68 (275)
T PRK00166 62 VLGNHDL 68 (275)
T ss_pred EecChhH
Confidence 9999997
No 83
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.12 E-value=0.0012 Score=64.97 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=44.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----C--------CCCEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----~--------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
|++++||+|- ....+++++++. . +.|.++++||+++. |..+ .+-.+.+..
T Consensus 2 ~i~vigDIHG---------------~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHG---------------CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCC---------------CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 6899999974 345677777764 1 36899999999954 4322 233344444
Q ss_pred hhcCCCEEEccCCCCC
Q 010191 356 IASTVPYMIASGNHER 371 (515)
Q Consensus 356 l~~~vP~~~v~GNHE~ 371 (515)
+...-.+.++.||||.
T Consensus 64 l~~~~~~~~v~GNHE~ 79 (234)
T cd07423 64 MVAAGAALCVPGNHDN 79 (234)
T ss_pred HhhCCcEEEEECCcHH
Confidence 3333467899999996
No 84
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.12 E-value=0.011 Score=65.46 Aligned_cols=190 Identities=17% Similarity=0.124 Sum_probs=85.2
Q ss_pred eEEEEEeecCCCCCCC--------CCcccccccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 287 QQVIIFGDMGKDEADG--------SNEYNNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g--------~~~y~~~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
++|+.++|+|..-... ...+. ..+....+..++++. +.+ -+++.+||+...... ..+..-...++
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~--~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~-~~~~~g~~~i~- 76 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKA--AIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLY-FTLFGGRADAA- 76 (550)
T ss_pred CEEEEEccccccccCcccccccCCCcccc--ccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccc-hhhcCCHHHHH-
Confidence 4789999998542110 00000 112233444444432 223 488899999853321 11111011122
Q ss_pred hhcCCC-EEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCCC----CCCceEEEEEeCC--EEEEEEcCCCC-
Q 010191 356 IASTVP-YMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTE----NRAKFWYSTDYGM--FRFCIADTEQD- 426 (515)
Q Consensus 356 l~~~vP-~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~~----~~~~~~Ysfd~G~--v~fi~Ldt~~~- 426 (515)
++..+. =+.++||||+++.... +... -.+...|+- ........ ..-..|.-++.++ |-||.+.+...
T Consensus 77 ~~N~~g~Da~~lGNHEFd~G~~~--l~~~--~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~ 152 (550)
T TIGR01530 77 LMNAAGFDFFTLGNHEFDAGNEG--LKEF--LEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKT 152 (550)
T ss_pred HHhccCCCEEEeccccccCCHHH--HHHH--HHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCccc
Confidence 222333 3678999999853210 0000 000001110 00000000 0123456678887 56777765221
Q ss_pred c---CCC-----HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEe
Q 010191 427 W---REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVF 497 (515)
Q Consensus 427 ~---~~g-----~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vdlvls 497 (515)
. .++ ....+=+++..+.....+..-+|++.|... . +. . .|.++ .+||++|.
T Consensus 153 ~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~------------~d--~----~la~~~~~iD~Iig 212 (550)
T TIGR01530 153 VESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--E------------KN--C----EIAQKINDIDVIVS 212 (550)
T ss_pred ccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--H------------HH--H----HHHhcCCCCCEEEe
Confidence 1 111 011111222222222145677999999653 1 00 1 12233 47999999
Q ss_pred Ccccccc
Q 010191 498 GHVHNYE 504 (515)
Q Consensus 498 GH~H~Ye 504 (515)
||.|.+-
T Consensus 213 GHsH~~~ 219 (550)
T TIGR01530 213 GDSHYLL 219 (550)
T ss_pred CCCCccc
Confidence 9999964
No 85
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.11 E-value=0.0017 Score=71.09 Aligned_cols=82 Identities=15% Similarity=0.297 Sum_probs=51.4
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHH-HHHHHh-------cCCCCEEEEcCccccCCCc-------------
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT-RQLIQD-------LKNIDIVFHIGDICYANGY------------- 342 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~-~~l~~~-------~~~pDfVl~~GDi~y~~g~------------- 342 (515)
+...++++++|+|.+... + .....+.+ +.+... ..+++.++++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987531 0 01111222 222211 2468999999999964221
Q ss_pred hhHHHHHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 343 ISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 343 ~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
..+++.+.+.++.+.+.+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112344556667777789999999999974
No 86
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.07 E-value=0.0094 Score=54.14 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=45.1
Q ss_pred EEEEEeecCCCCCCCC--CcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 288 QVIIFGDMGKDEADGS--NEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~--~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.+.++||+|.+...-- ..+++...-....+....+....-|.+.|+||++...... ......++.+-.++ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 4678899988764211 1122211111123333333345568999999999644332 23344555554444 899
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999975
No 87
>PHA02239 putative protein phosphatase
Probab=97.07 E-value=0.0014 Score=64.48 Aligned_cols=66 Identities=14% Similarity=0.267 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---C-CCCEEEEcCccccCCCchhHHHHHHHHHhh-hhcCCCE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---K-NIDIVFHIGDICYANGYISQWDQFTAQIEP-IASTVPY 362 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~-~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~-l~~~vP~ 362 (515)
|++++||+|.. ...++++++.. . ..|.++++||+++ +|..+ .+..+.+.. +....++
T Consensus 2 ~~~~IsDIHG~---------------~~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s--~~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGE---------------YQKLLTIMDKINNERKPEETIVFLGDYVD-RGKRS--KDVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCC---------------HHHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCCh--HHHHHHHHHHhhcCCCe
Confidence 68999999842 23345555443 1 3599999999995 44332 122222222 2234678
Q ss_pred EEccCCCCC
Q 010191 363 MIASGNHER 371 (515)
Q Consensus 363 ~~v~GNHE~ 371 (515)
++++||||.
T Consensus 64 ~~l~GNHE~ 72 (235)
T PHA02239 64 VTLLGNHDD 72 (235)
T ss_pred EEEECCcHH
Confidence 999999996
No 88
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.01 E-value=0.0089 Score=56.00 Aligned_cols=90 Identities=13% Similarity=0.217 Sum_probs=55.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.++++++|+|...+ ......++.. .+++|+|+|+||.+..... . .++.. -..++++|.
T Consensus 2 m~ilviSDtH~~~~------------~~~~~~~~~~-~~~~d~vih~GD~~~~~~~-~-------~l~~~-~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLR------------AIEKALKIFN-LEKVDAVIHAGDSTSPFTL-D-------ALEGG-LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChh------------hhhHHHHHhh-hcCCCEEEECCCcCCccch-H-------Hhhcc-cccceEEEE
Confidence 58999999997542 1122222222 3789999999999954321 1 11110 157889999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ 425 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~ 425 (515)
||.|..... -..|. --.+..++++|+++..-.
T Consensus 60 GN~D~~~~~---------------------~~~p~------~~~~~~~g~ki~l~HGh~ 91 (172)
T COG0622 60 GNCDGEVDQ---------------------EELPE------ELVLEVGGVKIFLTHGHL 91 (172)
T ss_pred ccCCCcccc---------------------ccCCh------hHeEEECCEEEEEECCCc
Confidence 999985100 00111 135889999999988744
No 89
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.00 E-value=0.0017 Score=62.50 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=42.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
|++++||+|.. ...++++++.. .++|.++++||+++.+... .+ .++.+.. .++++
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~---~~~~l~~-~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LA---CLELLLE-PWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HH---HHHHHhc-CCEEE
Confidence 68999999732 34566666653 3589999999999644332 12 2232222 46899
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
No 90
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=96.99 E-value=0.0088 Score=61.51 Aligned_cols=39 Identities=26% Similarity=0.180 Sum_probs=25.4
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCcccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 504 (515)
++..-+|++.|-.- +. + . ..|.++ .+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~---d---~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------I---E---QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------h---H---HHHHhcCCCCCEEEeCCCCccC
Confidence 45667899999631 11 0 1 123344 479999999999874
No 91
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.97 E-value=0.002 Score=63.92 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=43.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC-----------CCCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~-----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
|+.++||+|- ....+.+++++.. +-|-++++||+++ +|..+ .+-++.+..+
T Consensus 2 ~~~vIGDIHG---------------~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHG---------------CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECcc---------------CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 6899999973 3466777776531 3478999999995 44322 1223333333
Q ss_pred hcCCCEEEccCCCCC
Q 010191 357 ASTVPYMIASGNHER 371 (515)
Q Consensus 357 ~~~vP~~~v~GNHE~ 371 (515)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
No 92
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.88 E-value=0.0027 Score=61.96 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=42.9
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC----------CCCEEEEcCccccCCCchhHHHHHHHHHhhhhc
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~ 358 (515)
+.++||+|- ....++++++++. ..|.++++||+++. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG---------------~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHG---------------HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccC---------------CHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 368999964 3567777777641 35799999999954 4322 223333333333
Q ss_pred CCCEEEccCCCCCC
Q 010191 359 TVPYMIASGNHERD 372 (515)
Q Consensus 359 ~vP~~~v~GNHE~~ 372 (515)
.-.+.++.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 33688999999963
No 93
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.87 E-value=0.013 Score=67.17 Aligned_cols=96 Identities=18% Similarity=0.260 Sum_probs=47.7
Q ss_pred EcCCCCCCCCceEEEEEeecCCCCCCCCCcccc--cccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHH-
Q 010191 276 KASPYPGQDSLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQF- 349 (515)
Q Consensus 276 ~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~--~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f- 349 (515)
.+.|..+..-.++|+..+|+|..-.+ ...|.. -..+-+..+..++++. +.+ -++|..||++...-. ..+...
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~-~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl-~~~~a~~ 182 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVN-YDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPL-GTYKAIV 182 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCccc-ccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc-cchhhhc
Confidence 34455555556999999999975321 101110 0111223333444432 223 478899999954321 111000
Q ss_pred -------HHHHhhhhcCCCE-EEccCCCCCCC
Q 010191 350 -------TAQIEPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 350 -------~~~i~~l~~~vP~-~~v~GNHE~~~ 373 (515)
...+-.++..+.| ..++||||+++
T Consensus 183 ~~~~~g~~~P~i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 183 DPVEEGEQHPMYAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred cccccCcchHHHHHHhccCCCEEEechhhccc
Confidence 0112222333443 67899999985
No 94
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.84 E-value=0.04 Score=54.93 Aligned_cols=138 Identities=11% Similarity=0.115 Sum_probs=76.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHH-h---------cCCCCEEEEcCccccCCCc----------------
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 342 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~-~---------~~~pDfVl~~GDi~y~~g~---------------- 342 (515)
+++++|++.+... . ....++.+.+.+. + ..++.-++++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 6889999987531 1 1112223222222 1 1234579999999974321
Q ss_pred ---hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc---ceeccCCCCCCceEEEEEeCCE
Q 010191 343 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE---NMFYVPTENRAKFWYSTDYGMF 416 (515)
Q Consensus 343 ---~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~~Ysfd~G~v 416 (515)
..+.+++...+..+.+.+|+.+.|||||-.... . ....-.+|-.+-. ..+..- .|. |.|+.+++
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~----l-PQqplh~~lfp~s~~~~~~~~v----tNP-~~~~i~g~ 144 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHS----L-PQQPLHRCLFPKSSNYSTLNLV----TNP-YEFSIDGV 144 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccccc----C-CCCCCCHHHhhcccccCCcEEe----CCC-eEEEECCE
Confidence 223445556677788899999999999964210 0 0000011100000 011111 122 56999999
Q ss_pred EEEEEcCCC-----CcCCCHHHHHHHHHHHhc
Q 010191 417 RFCIADTEQ-----DWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 417 ~fi~Ldt~~-----~~~~g~~Q~~WL~~~La~ 443 (515)
+|++.+... .+.+.+.-.+.|++.|+-
T Consensus 145 ~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 145 RVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred EEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 999988764 123344556778888765
No 95
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.72 E-value=0.0032 Score=61.21 Aligned_cols=64 Identities=14% Similarity=0.228 Sum_probs=42.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC---CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
-|++++||+|- ....+++++++.. +.|-++++||+++.+.... +.++-+.. ..+.
T Consensus 17 ~ri~vigDIHG---------------~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~------~vl~~l~~-~~~~ 74 (218)
T PRK11439 17 RHIWLVGDIHG---------------CFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL------RCLQLLEE-HWVR 74 (218)
T ss_pred CeEEEEEcccC---------------CHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH------HHHHHHHc-CCce
Confidence 38999999974 3456777777642 5789999999995433221 12222222 3467
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 75 ~v~GNHE~~ 83 (218)
T PRK11439 75 AVRGNHEQM 83 (218)
T ss_pred EeeCchHHH
Confidence 899999953
No 96
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.64 E-value=0.0047 Score=60.12 Aligned_cols=63 Identities=16% Similarity=0.303 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
-|++++||+|.. ...+++++++. ++.|.++++||+++.+.... +.++.+. .-.+.
T Consensus 15 ~ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~------~~l~~l~-~~~~~ 72 (218)
T PRK09968 15 RHIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL------NVLRLLN-QPWFI 72 (218)
T ss_pred CeEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH------HHHHHHh-hCCcE
Confidence 389999999743 45667776654 36899999999995433322 2222222 22468
Q ss_pred EccCCCCC
Q 010191 364 IASGNHER 371 (515)
Q Consensus 364 ~v~GNHE~ 371 (515)
.+.||||.
T Consensus 73 ~v~GNHE~ 80 (218)
T PRK09968 73 SVKGNHEA 80 (218)
T ss_pred EEECchHH
Confidence 99999996
No 97
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.49 E-value=0.0062 Score=60.79 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=42.1
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.++||+|- ....++++++++ ++.|.++++||+++ .|..+ .+.++.+..+. -.+.++.
T Consensus 2 yvIGDIHG---------------~~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQG---------------CYDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCC---------------CHHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 68999974 345677777664 35799999999995 44332 22333333332 3678999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999964
No 98
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.47 E-value=0.0088 Score=60.48 Aligned_cols=66 Identities=20% Similarity=0.288 Sum_probs=39.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--------CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~- 358 (515)
+++++||+|-. ...++++++.+ ...+.++++||+++.+.... +..+.+..+..
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~---eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR---KVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH---HHHHHHHHhhhc
Confidence 58999999743 34555554432 13568999999995443322 22233322222
Q ss_pred --CCCEEEccCCCCC
Q 010191 359 --TVPYMIASGNHER 371 (515)
Q Consensus 359 --~vP~~~v~GNHE~ 371 (515)
...++++.||||.
T Consensus 65 ~~~~~vv~LrGNHE~ 79 (304)
T cd07421 65 HPKQRHVFLCGNHDF 79 (304)
T ss_pred ccccceEEEecCChH
Confidence 2247899999995
No 99
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.44 E-value=0.0058 Score=60.50 Aligned_cols=169 Identities=22% Similarity=0.296 Sum_probs=95.7
Q ss_pred CEEEEcCccccCCCc-------hhHHHHHHHH----HhhhhcCCCEEEccCCCCCCCCCC---CCCCCCCCCCCcccccc
Q 010191 328 DIVFHIGDICYANGY-------ISQWDQFTAQ----IEPIASTVPYMIASGNHERDWPGT---GSFYGNMDSGGECGVLV 393 (515)
Q Consensus 328 DfVl~~GDi~y~~g~-------~~~wd~f~~~----i~~l~~~vP~~~v~GNHE~~~~~~---g~~y~~~dsgge~g~~~ 393 (515)
=-++..||++.+.|- ..++.+|... ..++.-.+|+|+-.||||.+-... -..|. ..+..|
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyR------rElrdy 201 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYR------RELRDY 201 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHH------HHHHHH
Confidence 346777899976542 1122222111 223334799999999999873221 01110 000011
Q ss_pred c------ceecc---CCC--CCCceEEEEEeCCEEEEEEcCCCC-cCCC-HHHHHHHHHHHhcccCCCCCEEEEEeccCC
Q 010191 394 E------NMFYV---PTE--NRAKFWYSTDYGMFRFCIADTEQD-WREG-TEQYRFIEHCLASVDRQKQPWLIFLAHRVL 460 (515)
Q Consensus 394 ~------~~f~~---P~~--~~~~~~Ysfd~G~v~fi~Ldt~~~-~~~g-~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~ 460 (515)
. ..|.- |.. +..+--||+++|++|.+-+-+... -.++ ..-+-||+.+|.......+| ++++.|.-.
T Consensus 202 ve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGw 280 (392)
T COG5555 202 VENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGW 280 (392)
T ss_pred HHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCc
Confidence 0 01111 111 223445899999998887754321 1111 23467999999876545667 888888743
Q ss_pred -cCCCCCCCcc------CCC-----CCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 461 -GYSSDLSYAV------EGS-----FAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 461 -~yss~~~~~~------~~~-----~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
.+++..|... .++ ..++. |..|...++-|+|.-.+.||.|.+.
T Consensus 281 dtfsteawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 281 DTFSTEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred cceeccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccc
Confidence 2444444221 111 11223 7788889999999999999999864
No 100
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.41 E-value=0.034 Score=67.04 Aligned_cols=49 Identities=29% Similarity=0.327 Sum_probs=30.6
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCccccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYER 505 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~YeR 505 (515)
.+..-+|++.|..+ - ... ...+ . .+....|.++ .+||+++.||.|..-.
T Consensus 233 ~gaDvII~l~H~G~-~-~~~--~~~~--~----en~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 233 GGADVIVALAHSGI-E-SEY--QSSG--A----EDSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred cCCCEEEEEeccCc-C-CCC--CCCC--c----chHHHHHHHhCCCCcEEEeCCCccccc
Confidence 45778999999875 2 111 0011 1 2233445544 5899999999999753
No 101
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.20 E-value=0.011 Score=57.22 Aligned_cols=65 Identities=20% Similarity=0.276 Sum_probs=41.3
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-CCCEEEcc
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 366 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~~v~ 366 (515)
+++||+|.. ...+.++++.. ...|.++++||+++. |... .+....+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999732 34566666653 368999999999954 3322 122233322211 45789999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999974
No 102
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.17 E-value=0.13 Score=59.07 Aligned_cols=86 Identities=17% Similarity=0.275 Sum_probs=43.5
Q ss_pred ceEEEEEeecCCCCCCCCCccccc--ccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHH-----------
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQF----------- 349 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~--~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f----------- 349 (515)
.++|+..+|+|..-.+ ...|..- ...-+..+..++++. +++ -++|..||++...-. ..+-..
T Consensus 39 ~L~IL~TnDiHg~l~~-~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl-~~~~~~~~~~~~~~~~~ 116 (780)
T PRK09418 39 NLRILETSDIHVNLMN-YDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPL-GDYVANKINDPKKPVDP 116 (780)
T ss_pred EEEEEEEeecCCCCcC-cCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchH-HHHHhhccccccccccc
Confidence 4899999999976421 1111110 111233344444432 223 488899999954322 111000
Q ss_pred --HHHHhhhhcCCCE-EEccCCCCCCC
Q 010191 350 --TAQIEPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 350 --~~~i~~l~~~vP~-~~v~GNHE~~~ 373 (515)
...+-.++..+-| ..++||||+++
T Consensus 117 ~~~~p~i~~mN~lgyDa~tlGNHEFdy 143 (780)
T PRK09418 117 SYTHPLYRLMNLMKYDVISLGNHEFNY 143 (780)
T ss_pred ccchHHHHHHhccCCCEEecccccccc
Confidence 0112223333444 57899999975
No 103
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=96.16 E-value=0.13 Score=50.52 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=49.7
Q ss_pred EEEEEeCC--EEEEEEcCCCCcC---C-------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCC
Q 010191 408 WYSTDYGM--FRFCIADTEQDWR---E-------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (515)
Q Consensus 408 ~Ysfd~G~--v~fi~Ldt~~~~~---~-------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~ 475 (515)
+..++.++ |-|+.+.+..... . .....+-+++.++++. ++...+|+..|-..-|.. ..
T Consensus 123 ~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p 192 (239)
T cd07381 123 PAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAK-KKADIVIVSLHWGVEYSY---------YP 192 (239)
T ss_pred cEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHh-hcCCEEEEEecCcccCCC---------CC
Confidence 45567777 4555555443110 0 0111234555665553 237889999996541211 11
Q ss_pred chhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 476 ~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
... ...+...+.+.++|+++.||.|..+-
T Consensus 193 ~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 193 TPE-QRELARALIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred CHH-HHHHHHHHHHCCCCEEEcCCCCcCCC
Confidence 122 34566666678999999999998763
No 104
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.13 E-value=0.015 Score=46.52 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=43.4
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCC--CCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGI--NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+|..+++... ..+++.|+|...... .-..-.|+|....+... ..... .++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-----~~~~~---------------~~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD-----WQEVT---------------VPGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE-----EEEEE---------------EETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee-----eeeee---------------eeeeeeeeee
Confidence 3555555332 679999999987411 11233666655433320 01110 0112336789
Q ss_pred cCCCCCCEEEEEeceec
Q 010191 246 RELWPNAMYTYKLGHRL 262 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (515)
+||+|++.|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999999763
No 105
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.00 E-value=0.086 Score=59.37 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccCcHHHHHHHHHhc--C-CCCEEEEcCccccCCCchhHHHHHH-------HHHh
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQDL--K-NIDIVFHIGDICYANGYISQWDQFT-------AQIE 354 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~--~~~~~~~~~~l~~~~--~-~pDfVl~~GDi~y~~g~~~~wd~f~-------~~i~ 354 (515)
++++..+|+|..-.+ ...|..- ...-+..+..++++. + .--+++..||+...... ..|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~-~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMD-YDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccC-CcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 799999999975321 1001100 111223344444432 1 23488899999954322 2121110 1111
Q ss_pred hhhcCCCE-EEccCCCCCCC
Q 010191 355 PIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 355 ~l~~~vP~-~~v~GNHE~~~ 373 (515)
.++..+.| ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 22333443 57899999975
No 106
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=95.84 E-value=0.19 Score=49.47 Aligned_cols=64 Identities=20% Similarity=0.177 Sum_probs=38.9
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccccCC
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQW 512 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~ 512 (515)
+++.++++. .+...+|++.|--.-|.. ...+. ...+..-+.+.+||+++.||.|..+.. .+|++
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~-e~~~~ 225 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY---------EPTDE-QRELAHALIDAGADVVIGHHPHVLQPI-EIYKG 225 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC---------CCCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce-EEECC
Confidence 445555543 357889999997642211 01122 335555555678999999999998733 34443
No 107
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.67 E-value=0.22 Score=56.37 Aligned_cols=87 Identities=17% Similarity=0.239 Sum_probs=43.0
Q ss_pred CceEEEEEeecCCCCCCCCCcccc--cccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHH-------HH
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFT-------AQ 352 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~--~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~-------~~ 352 (515)
..++|+..+|+|..-.+ ...|.. -...-+..+..++++. +.+ -+++..||++..... ..|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~-~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMD-FDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccC-CccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcch
Confidence 35999999999975321 101110 0111223334444432 223 478899999954322 2221110 01
Q ss_pred HhhhhcCCCE-EEccCCCCCCC
Q 010191 353 IEPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 353 i~~l~~~vP~-~~v~GNHE~~~ 373 (515)
+-.+...+-| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 67899999975
No 108
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.66 E-value=0.024 Score=57.09 Aligned_cols=64 Identities=14% Similarity=0.283 Sum_probs=41.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC---CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+..++||+|- ....++++++++. ..|-++++||+++.+.... +-++.+..+. -.+..
T Consensus 2 ~~YvIGDIHG---------------c~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHG---------------CYDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccC---------------CHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEE
Confidence 4679999964 3456777777643 5789999999995443321 2223333321 13568
Q ss_pred ccCCCCC
Q 010191 365 ASGNHER 371 (515)
Q Consensus 365 v~GNHE~ 371 (515)
+.||||.
T Consensus 62 VlGNHD~ 68 (279)
T TIGR00668 62 VLGNHDL 68 (279)
T ss_pred EEChhHH
Confidence 9999996
No 109
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=95.31 E-value=0.045 Score=56.39 Aligned_cols=67 Identities=21% Similarity=0.167 Sum_probs=41.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCC---CCEEEEcCccccCCCchhHHHHHHHHHhhhhc--CCCE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~---pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~--~vP~ 362 (515)
+++++||+|- ....+.++++...- -+-.+++||+++ +|..+ - +-+..+-.+.- .--+
T Consensus 52 ~~~vvGDiHG---------------~~~dL~~il~~~g~~~~~~~~lFLGDyVD-RG~~s-~-Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHG---------------KLDDLFLIFYKNGLPSPENPYVFNGDFVD-RGKRS-I-EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCC---------------CHHHHHHHHHHcCCCCccceEEEeccccC-CCCCc-H-HHHHHHHHHhhcCCCcE
Confidence 5899999963 34567777765422 267999999995 44322 1 11222221111 2237
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
No 110
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=95.00 E-value=0.54 Score=55.17 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=73.6
Q ss_pred cceEEEEEEeeccc--ceEEEEEecCCCCceEEEecCcccc----CCCCCCCc-ceeeecCCCCeEEEEEEeCCCCCCCc
Q 010191 125 GKGSLKLQLINQRS--DFSFVLFTNGLLNPKVVAVSNKVTF----TNPNAPVY-PRLAQGKVWNEMTVTWTSGYGINEAE 197 (515)
Q Consensus 125 g~~s~~~~l~n~r~--~~~f~~~~~~~~~~~~~a~s~~i~~----~~~~~P~~-~~La~~~~~~~m~V~W~t~~~~~~~~ 197 (515)
-......+|-+++. +|.|.+-..+..-+ --.|..|++ .-|.+|-+ +.| .-.++++++|.|..........
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~--g~sS~~i~V~Tlsd~PsaPP~Nl~l-ev~sStsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGS--GVSSADITVRTLSDVPSAPPQNLSL-EVVSSTSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCC--CCCCCceEEEeccCCCCCCCcceEE-EecCCCeEEEEccCCCcccccc
Confidence 34455566666664 78887765422110 001222322 24555655 666 4456899999999875433222
Q ss_pred c----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccccceE
Q 010191 198 P----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY 273 (515)
Q Consensus 198 ~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~ 273 (515)
. .++|+..+... ....++. +|.-..-.+.+|+|+|.|.+||.....+|+.-.|++.
T Consensus 647 ~itgYkIRy~~~~~~~----~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~ 706 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSRED----EVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWV 706 (1381)
T ss_pred eEEEEEEEecccCccc----ccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccce
Confidence 2 34444332211 1111111 1111222468899999999999877667776678888
Q ss_pred EEEcC
Q 010191 274 QFKAS 278 (515)
Q Consensus 274 ~F~T~ 278 (515)
.+.|+
T Consensus 707 ~aeT~ 711 (1381)
T KOG4221|consen 707 SAETP 711 (1381)
T ss_pred eccCc
Confidence 88886
No 111
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.83 E-value=0.17 Score=51.99 Aligned_cols=181 Identities=19% Similarity=0.281 Sum_probs=93.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCc--------hhHHH---HHHHHH-
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY--------ISQWD---QFTAQI- 353 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~--------~~~wd---~f~~~i- 353 (515)
.|+++-|.+|..- ....+++..+-+. ..++|++++.||+---+.. ...+. .|++..
T Consensus 1 MrIaVqGCcHG~L-----------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-----------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhH-----------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 3678888886421 0112333333221 2479999999998743321 12222 233322
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEE-----EEEeCCEEEEEEcCC---C
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWY-----STDYGMFRFCIADTE---Q 425 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y-----sfd~G~v~fi~Ldt~---~ 425 (515)
..+.+.+|.+++=||||... +......||= . ..|.|| ...+|+||+-.|+.- +
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL~eLpyGGw---V-----------ApNIyYlG~agVv~~~gvRIggiSGI~k~~ 130 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YLQELPYGGW---V-----------APNIYYLGYAGVVNFGGVRIGGISGIYKEH 130 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HHHhcccCce---e-----------ccceEEeeecceEEECCEEEeeccchhhhh
Confidence 23456789999999999741 1110011110 0 123333 467899999888753 3
Q ss_pred CcCCC--------HH-------HHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCC------CC------Cchh
Q 010191 426 DWREG--------TE-------QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG------SF------AEPM 478 (515)
Q Consensus 426 ~~~~g--------~~-------Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~------~~------~~~~ 478 (515)
++..| .. -.+.=...|.+. +.|--|+++|-=+ -.- -.|++.. .| ...+
T Consensus 131 dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP-~GI-~~yGd~~~LLr~KPFFrqeie~~~L 205 (456)
T KOG2863|consen 131 DYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQL---KHPIDIFLSHDWP-RGI-YYYGDKKQLLRLKPFFRQEIEEGKL 205 (456)
T ss_pred hcccCCCCCCCccchhhhhhhhhhhhhhHHHHhh---cCcceEEeecCCC-cch-hhcCCHHHHHhcCcHHHHHHhcCCc
Confidence 33321 00 001111233442 3455688888632 111 0112110 00 0123
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
|...++.||++-+....|+.|.|.
T Consensus 206 GSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 206 GSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred CChHHHHHHHHhCcchhhhhhHhh
Confidence 456888999999999999999996
No 112
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.81 E-value=0.08 Score=51.80 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=49.8
Q ss_pred eEEEEEeecCCCCCC-----CCCcccccccC-cHHHHHHHHHhcCCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhhc
Q 010191 287 QQVIIFGDMGKDEAD-----GSNEYNNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS 358 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~-----g~~~y~~~~~~-~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~ 358 (515)
-+.++++|+|.+-.. |.+ .-.+|.. ....+.++++. .+|+-++..||+-.+-+. ..+|+.....++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~-lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGIN-LPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcc-cCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 468999999986421 110 0011111 12344445554 689999999999976543 3445443333343333
Q ss_pred CCCEEEccCCCCCCC
Q 010191 359 TVPYMIASGNHERDW 373 (515)
Q Consensus 359 ~vP~~~v~GNHE~~~ 373 (515)
+ -+..+.||||-+-
T Consensus 98 ~-evi~i~GNHD~~i 111 (235)
T COG1407 98 R-EVIIIRGNHDNGI 111 (235)
T ss_pred C-cEEEEeccCCCcc
Confidence 3 5999999999763
No 113
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=94.57 E-value=0.1 Score=53.42 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCC--CEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v--P~~ 363 (515)
+++++||+|- ....+.++++... ..+-++++||+++ +|... -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG---------------~~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHG---------------QFYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCC---------------CHHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 4899999974 2345666666533 3488999999995 45322 12222222222223 478
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.++||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 999999974
No 114
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=94.57 E-value=0.59 Score=46.24 Aligned_cols=147 Identities=15% Similarity=0.109 Sum_probs=75.2
Q ss_pred CCCCEEEEcCccccCCCc---hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCC
Q 010191 325 KNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPT 401 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~ 401 (515)
.++|||+..|..+ +.|. ....+++++. .+- .++.|||=++..+--.+.+.. . ....-.++|.
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~~------GvD-viT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~ 90 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFKA------GVD-VITMGNHIWDKKEIFDFIDKE---P----RILRPANYPP 90 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHHH------T-S-EEE--TTTTSSTTHHHHHHH----S----SEE--TTS-T
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHhc------CCC-EEecCcccccCcHHHHHHhcC---C----CcEECCCCCC
Confidence 4799999999999 5554 2233333322 232 478899987643211111000 0 0001123455
Q ss_pred CCCCceEEEEEeCCEEEEEEcCC--CCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhh
Q 010191 402 ENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479 (515)
Q Consensus 402 ~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (515)
...+.-|..++.++.++.++|-. ....+...=..-+++.|++. +.+++.+||=+|.=. -.
T Consensus 91 ~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa-----------------TS 152 (253)
T PF13277_consen 91 GTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA-----------------TS 152 (253)
T ss_dssp T-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S------------------HH
T ss_pred CCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc-----------------HH
Confidence 55677799999999888777743 22222223344455555554 256788888888532 00
Q ss_pred HHHHHHHHHhcCCeEEEeCcccccc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
-+.-+-.+.+-+|.+|+-=|+|.--
T Consensus 153 EK~A~g~~lDGrvsaV~GTHTHVqT 177 (253)
T PF13277_consen 153 EKQAMGWYLDGRVSAVVGTHTHVQT 177 (253)
T ss_dssp HHHHHHHHHBTTBSEEEEESSSS-B
T ss_pred HHHHHHHHhCCcEEEEEeCCCCccC
Confidence 2244556677899999999999854
No 115
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=94.53 E-value=0.26 Score=48.90 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=44.1
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 433 QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
+.+.++++++++. ++..++||+.|--.-|.. ...+. ...+...+.+.++|+|+.+|.|..+-.
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPV 231 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccce
Confidence 4477888888875 568899999996431211 11223 446666666689999999999998743
No 116
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=93.80 E-value=0.22 Score=50.17 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=41.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (515)
+++++||+|. ....+.++++.. ...+-++++||+++ +|... .+-+..+..+. ..--++
T Consensus 29 ~i~vvGDiHG---------------~~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s--~e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHG---------------QFDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFS--IEVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcC---------------CHHHHHHHHHHcCCCCCceEEEeCCccC-CCCCh--HHHHHHHHHHHhcCCCCEE
Confidence 5899999963 345566666543 34678999999995 44322 11222222221 123478
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999975
No 117
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=93.79 E-value=0.16 Score=53.34 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CC-CEEEEcCccccCCCchhHHHHHHHHHhhhhcC--CCE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPY 362 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~--vP~ 362 (515)
++.++||+|. ....+.++++... .. +.++++||+++ +|... -+.+..+..+.-. --+
T Consensus 67 ~i~VvGDIHG---------------~~~dL~~ll~~~g~~~~~~~ylFLGDyVD-RGp~S--lEvl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHG---------------QLHDVLFLLEDAGFPDQNRFYVFNGDYVD-RGAWG--LETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCC---------------CHHHHHHHHHHhCCCCCCceEEEeccccC-CCCCh--HHHHHHHHHHhhccCCeE
Confidence 5899999974 3456677776532 22 35899999994 45322 1222222222212 237
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8999999975
No 118
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=93.69 E-value=0.18 Score=51.13 Aligned_cols=67 Identities=19% Similarity=0.219 Sum_probs=40.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (515)
.+.++||+|. ....+.++++.. +..+-++++||+++ +|.... +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG---------------~~~dL~~ll~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHG---------------QFYDLLELFRVGGDPPDTNYLFLGDYVD-RGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCC---------------CHHHHHHHHHHcCCCCCCeEEEEeEECC-CCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 3889999963 234566666542 34567889999995 454321 2222222222 133589
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
No 119
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.59 E-value=0.64 Score=52.57 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=58.5
Q ss_pred CCCCCCc-ceeeec-CCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVY-PRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~-~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
|..+|.. .+|-+. ...+++++.|.-.+..+. ..-.|+|-+++.... +|.. . ..-.
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~-------~~~~----------~----~t~~ 497 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDER-------SYST----------L----KTKT 497 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccccc-------ceeE----------E----eccc
Confidence 3344444 333333 358999999987653111 123455655543211 1110 0 0123
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
.+++++||+|||.|.+||......|-..+|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5678999999999999999876556667899999999885
No 120
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=93.25 E-value=0.23 Score=50.61 Aligned_cols=25 Identities=20% Similarity=0.361 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcccc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+.++..+++++.++++=||.-.
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccc
Confidence 3578999999999999999999855
No 121
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.22 E-value=0.27 Score=52.58 Aligned_cols=83 Identities=17% Similarity=0.313 Sum_probs=53.0
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh---cCCCCEEEEcCccccCCC-c------------hhHHH
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANG-Y------------ISQWD 347 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~---~~~pDfVl~~GDi~y~~g-~------------~~~wd 347 (515)
...++++.++|.|.+. .++.. ......++++.-. ..+...++.+||+++.-| + ..|++
T Consensus 223 ~e~v~v~~isDih~GS----k~F~~--~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~ 296 (481)
T COG1311 223 DERVYVALISDIHRGS----KEFLE--DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYE 296 (481)
T ss_pred CcceEEEEEeeeeccc----HHHHH--HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHH
Confidence 3458899999999864 23210 1112223333211 123578999999997432 1 24566
Q ss_pred HHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 348 QFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 348 ~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
++.+.+..+-..+-+++.|||||.-
T Consensus 297 ~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 297 ELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHhhCCCCceEEEecCCCCcc
Confidence 6666777777788899999999975
No 122
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=93.19 E-value=0.26 Score=50.61 Aligned_cols=23 Identities=9% Similarity=0.403 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHV 500 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~ 500 (515)
.+.+++...++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 35789999999999999999998
No 123
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=92.95 E-value=0.14 Score=55.09 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=36.6
Q ss_pred CceEEEEEeecCCCCCCCCCcccc-cccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNN-FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG 341 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~-~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g 341 (515)
..+||++..|.|.+.. +-+. ....+..++.+|+.- .++.|+|+.+|||...+.
T Consensus 12 ntirILVaTD~HlGY~----EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYG----EKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccc----cCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 4599999999998642 2111 123456677776542 368999999999997653
No 124
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=92.95 E-value=0.74 Score=35.89 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=24.3
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEE
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F 275 (515)
.....+.+|.|+++|.++|.....++...|+....|
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~ 91 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV 91 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence 456778999999999999987532333344443444
No 125
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=92.73 E-value=6.5 Score=46.29 Aligned_cols=194 Identities=16% Similarity=0.103 Sum_probs=107.3
Q ss_pred EcccccccCCCcccEEEEEEecC-----CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCcCCCceeEEcccCCCcccc
Q 010191 49 ASPSILGMKGQNSDWLTVEYNSP-----NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKS 123 (515)
Q Consensus 49 ~~p~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 123 (515)
.+|+=|.-.|.....++|+|... +-..-.++=.|.|..... .+...-+....==+|.|.+.+-.+|
T Consensus 718 ~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~-- 788 (1051)
T KOG3513|consen 718 VNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF-- 788 (1051)
T ss_pred cCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc--
Confidence 34555555566668899999984 334556677788875541 1110001011113567777553334
Q ss_pred ccceEEEEEEeecccceEEEEEecCCCCceEEEecCccccCCCCCCCcceeeecCCCCeEEEEEEeCCC--CCCCccEEE
Q 010191 124 TGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVE 201 (515)
Q Consensus 124 ~g~~s~~~~l~n~r~~~~f~~~~~~~~~~~~~a~s~~i~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~ 201 (515)
=.-.++++.+|.+-+=. ..++.+..|..= .-+.+|....+ ...+.++|.|.|....- .....-.|+
T Consensus 789 -tpyevKVqa~N~~GeGp--------~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~ 856 (1051)
T KOG3513|consen 789 -TPYEVKVQAINDQGEGP--------ESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVK 856 (1051)
T ss_pred -ceeEEEEEEecCCCCCC--------CCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEE
Confidence 24568888888775422 223344444221 12455666665 66678999999944321 123345788
Q ss_pred EccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 202 WGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 202 yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
|....+.. ..+... +-.+..-.+.|+||+|+|.|++.|..-..-|...-|...+-.|.+.+
T Consensus 857 Y~~~~~~~--~~~~~~-----------------~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 857 YWKINEKE--GSLSRV-----------------QIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred EEEcCCCc--ccccce-----------------eecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCC
Confidence 87654432 001111 01234566789999999999999987643343333444444555544
Q ss_pred C
Q 010191 282 G 282 (515)
Q Consensus 282 ~ 282 (515)
.
T Consensus 918 P 918 (1051)
T KOG3513|consen 918 P 918 (1051)
T ss_pred C
Confidence 3
No 126
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=92.67 E-value=0.33 Score=50.03 Aligned_cols=25 Identities=8% Similarity=0.291 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcccc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+.+...+++++.++++=||.=.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCccc
Confidence 3578999999999999999999854
No 127
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=92.66 E-value=0.35 Score=49.53 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=40.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCC--CEEE
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYMI 364 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v--P~~~ 364 (515)
+.++||+|. ....+.++++... ..+-++++||+++ +|.... +.+..+..+.-.. -++.
T Consensus 45 i~vvGDIHG---------------~~~~L~~l~~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHG---------------QFYDLQALFKEGGDIPNANYIFIGDFVD-RGYNSV--ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCC---------------CHHHHHHHHHhcCCCCCceEEEeeeEcC-CCCCHH--HHHHHHHHhhhcCCCcEEE
Confidence 889999963 3455666666432 3467899999995 453221 1122222222222 3789
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
No 128
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=92.61 E-value=2.7 Score=41.33 Aligned_cols=181 Identities=17% Similarity=0.142 Sum_probs=97.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|++++||+=-.. |. ....+.+..+.++ -++|||+..|-.+ ++|.---|+.+...++. .+- +++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEec
Confidence 4899999982211 10 0112233344333 4799999999999 66665555665555543 222 5789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC--CcCC-CHHHHHHHHHHHhc
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ--DWRE-GTEQYRFIEHCLAS 443 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~--~~~~-g~~Q~~WL~~~La~ 443 (515)
|||=.+.++--.|-+..+ . ...-.++|....+.-|.-|...+..+.+.+-.- .... -..-.+=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999876432211110000 0 001123444444566777888777666665332 1111 11223335566666
Q ss_pred ccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccc
Q 010191 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (515)
Q Consensus 444 ~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 507 (515)
.+ .+++.+||-+|.-- +| |. .-.-++-+-+|.+|+-=|+|.-.--+
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------EK----~a~g~yldGrvsavvGTHTHV~TaD~ 184 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------EK----NAFGWYLDGRVSAVVGTHTHVPTADE 184 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------hh----hhhheEEcCeEEEEEeccCccccccc
Confidence 44 45677888888642 11 11 11223345568999999999865433
No 129
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=92.25 E-value=0.37 Score=49.61 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcccc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999855
No 130
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=92.02 E-value=0.36 Score=49.16 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=21.5
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
+.++++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 478999999999999999999854
No 131
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=89.23 E-value=3.2 Score=45.51 Aligned_cols=99 Identities=22% Similarity=0.371 Sum_probs=63.2
Q ss_pred EEEEEec---CCCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCcCCCceeEEcccCCCccccccc---eEEEEE---Ee
Q 010191 64 LTVEYNS---PNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGK---GSLKLQ---LI 134 (515)
Q Consensus 64 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~s~~~~---l~ 134 (515)
|+..|+- ..|+..||||||=-.-+.. .-...|.|+... .+| ..|+ ..+.|. |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543222 334778888643 345 3443 467785 55
Q ss_pred ec-ccceEEEEEecCCCCceEEEecCccccCCCCCCCcceeeecCC--CCeEE
Q 010191 135 NQ-RSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV--WNEMT 184 (515)
Q Consensus 135 n~-r~~~~f~~~~~~~~~~~~~a~s~~i~~~~~~~P~~~~La~~~~--~~~m~ 184 (515)
+. =..|.|.+.... -.+.+.|.++.|..|+ |+..-+++..+ ...|-
T Consensus 84 k~~~e~YqfcYv~~~---g~V~G~S~pFqf~~~~-p~eeLvtle~e~~~~DmL 132 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQK---GEVRGASTPFQFRAPK-PLEELVTLEDEDGNSDML 132 (546)
T ss_pred CCCCCeEEEEEECCC---ccEEEecCCcccCCCC-ccccceeecccCCCcceE
Confidence 43 235788776542 2488999999998764 66655666542 34553
No 132
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=88.13 E-value=2.8 Score=46.09 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHH-HHHHHhc-CCeE-EEeCccccc
Q 010191 431 TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL-QKLWQKY-KVDI-AVFGHVHNY 503 (515)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l-~~Ll~k~-~Vdl-vlsGH~H~Y 503 (515)
-.|.+|-.+.++. .+..-+|+++|.|. .. +. . ++.+ ..+...+ ++++ +|-||.|..
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~------~~-----e-~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RD------DD-----E-WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--cc------ch-----h-hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 3566787777766 45666899999996 21 10 1 2223 3333333 6778 999999984
No 133
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=86.17 E-value=4.9 Score=30.00 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCCEEEEEecee
Q 010191 240 IHTGFLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (515)
-+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4677899999999999999764
No 134
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=85.72 E-value=1.3 Score=42.36 Aligned_cols=74 Identities=15% Similarity=0.267 Sum_probs=42.7
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCch---------hHH-HHH----HH
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYI---------SQW-DQF----TA 351 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~---------~~w-d~f----~~ 351 (515)
|++++|.+.+.. ....+.+.++++.. .+|+.+|++|+++...... ... ..+ .+
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888877632 11345666666532 4699999999999753221 111 112 23
Q ss_pred HHhhhhcCCCEEEccCCCCCC
Q 010191 352 QIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 352 ~i~~l~~~vP~~~v~GNHE~~ 372 (515)
.++.+...+++..++|+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 334555688999999999975
No 135
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=84.16 E-value=2.6 Score=42.11 Aligned_cols=64 Identities=22% Similarity=0.420 Sum_probs=42.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE---
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY--- 362 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~--- 362 (515)
-.||+.++|.|.-..+ + ++.++-|+++|+||.. +.|...+-..|-+. ..+.|+
T Consensus 61 ~~r~VcisdtH~~~~~------------------i-~~~p~gDvlihagdfT-~~g~~~ev~~fn~~----~gslph~yK 116 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD------------------I-NDIPDGDVLIHAGDFT-NLGLPEEVIKFNEW----LGSLPHEYK 116 (305)
T ss_pred ceEEEEecCcccccCc------------------c-ccCCCCceEEeccCCc-cccCHHHHHhhhHH----hccCcceee
Confidence 4799999999854321 1 1357889999999999 44444333344333 334554
Q ss_pred EEccCCCCCCC
Q 010191 363 MIASGNHERDW 373 (515)
Q Consensus 363 ~~v~GNHE~~~ 373 (515)
+++.||||...
T Consensus 117 IVIaGNHELtF 127 (305)
T KOG3947|consen 117 IVIAGNHELTF 127 (305)
T ss_pred EEEeeccceee
Confidence 78899999853
No 136
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=78.11 E-value=10 Score=38.47 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=49.0
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC-------CCCEEEEcCccccCC-----CchhHHHHHHHHH
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-------NIDIVFHIGDICYAN-----GYISQWDQFTAQI 353 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~-------~pDfVl~~GDi~y~~-----g~~~~wd~f~~~i 353 (515)
..+|+++||.+.+. +..++.++.+.+..+ -|-.+++.|+.+... +....+.+.|+.+
T Consensus 27 ~~~~VilSDV~LD~-----------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~L 95 (291)
T PTZ00235 27 RHNWIIMHDVYLDS-----------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKL 95 (291)
T ss_pred ceEEEEEEeeccCC-----------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHH
Confidence 37899999999875 334555565555442 278999999988642 1122344444433
Q ss_pred h--------hhhcCCCEEEccCCCCC
Q 010191 354 E--------PIASTVPYMIASGNHER 371 (515)
Q Consensus 354 ~--------~l~~~vP~~~v~GNHE~ 371 (515)
. .+..+.-++.|||-.|-
T Consensus 96 a~llls~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 96 SVMLISKFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred HHHHHHhChHHHhcCeEEEECCCCCC
Confidence 3 24456779999999996
No 137
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=74.77 E-value=50 Score=39.71 Aligned_cols=126 Identities=14% Similarity=0.143 Sum_probs=71.6
Q ss_pred ccceEEEEEEeecc--cceEEEEEecCCCCceEEEecCcccc-CCCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEE
Q 010191 124 TGKGSLKLQLINQR--SDFSFVLFTNGLLNPKVVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFV 200 (515)
Q Consensus 124 ~g~~s~~~~l~n~r--~~~~f~~~~~~~~~~~~~a~s~~i~~-~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V 200 (515)
++.| +.+.+.|.- ..|.|+.-.-+..- --..|.++.. +.|..|.+ .=+.+-.+.++.|+|....- ...+..
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g--~g~sS~pLkV~t~pEgp~~-~~a~ats~~ti~v~WepP~~--~n~~I~ 552 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAG--SGESSAPLKVTTQPEGPVQ-LQAYATSPTTILVTWEPPPF--GNGPIT 552 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCccc--CCccCCceEEecCCCCCcc-ccccccCcceEEEEecCCCC--CCCCce
Confidence 4555 666666654 35666655432110 0011222222 24445666 33344568999999998752 223444
Q ss_pred EEc----cCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEE
Q 010191 201 EWG----PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFK 276 (515)
Q Consensus 201 ~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~ 276 (515)
.|. .++.. .-..++ ..-++.+|.||+|.|.|.|||......|...-|...+|+
T Consensus 553 ~yk~~ys~~~~~------~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~ 609 (1381)
T KOG4221|consen 553 GYKLFYSEDDTG------KELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVR 609 (1381)
T ss_pred EEEEEEEcCCCC------ceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEE
Confidence 443 22111 011111 124667889999999999999988666766667888888
Q ss_pred cC
Q 010191 277 AS 278 (515)
Q Consensus 277 T~ 278 (515)
|.
T Consensus 610 Tl 611 (1381)
T KOG4221|consen 610 TL 611 (1381)
T ss_pred ec
Confidence 85
No 138
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=72.23 E-value=76 Score=32.49 Aligned_cols=20 Identities=15% Similarity=0.235 Sum_probs=17.3
Q ss_pred EEecCCCCCCEEEEEeceec
Q 010191 243 GFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
.+|.||+||+.|-..|....
T Consensus 262 etI~~L~PG~~Yl~dV~~~~ 281 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVNG 281 (300)
T ss_pred eecccCCCCcEEEEEEEEec
Confidence 37999999999999998763
No 139
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=58.67 E-value=1.2e+02 Score=36.25 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=73.4
Q ss_pred eEEEEEEeeccc--ceEEEEEecCCCCceEEEecCccccCCCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEcc
Q 010191 127 GSLKLQLINQRS--DFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204 (515)
Q Consensus 127 ~s~~~~l~n~r~--~~~f~~~~~~~~~~~~~a~s~~i~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 204 (515)
|-|+++=+.++. .|.++.=+. ++. +-+.++.+.-.-|.+|..+++ -+-..+.++|.|.-+.+ .-.|...|-.
T Consensus 577 g~L~i~nv~l~~~G~Y~C~aqT~-~Ds--~s~~A~l~V~gpPgpP~~v~~-~~i~~t~~~lsW~~g~d--n~SpI~~Y~i 650 (1051)
T KOG3513|consen 577 GRLTIANVSLEDSGKYTCVAQTA-LDS--ASARADLLVRGPPGPPPDVHV-DDISDTTARLSWSPGSD--NNSPIEKYTI 650 (1051)
T ss_pred cceEEEeeccccCceEEEEEEEe-ecc--hhcccceEEecCCCCCCceeE-eeeccceEEEEeecCCC--CCCCceEEeE
Confidence 446666666665 344443331 111 223334444456778887777 33357899999998865 2245777754
Q ss_pred CCC----CcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCccccc-ceEEEEcCC
Q 010191 205 KGG----DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWS-SEYQFKASP 279 (515)
Q Consensus 205 ~~~----~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS-~~~~F~T~p 279 (515)
... ..|..+. +. |. .+.|- +.+++.+|.|-..|.|||..-..-|...=| +.-..+|.+
T Consensus 651 q~rt~~~~~W~~v~-~v----------p~-----~~~~~-~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~e 713 (1051)
T KOG3513|consen 651 QFRTPFPGKWKAVT-TV----------PG-----NITGD-ESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPE 713 (1051)
T ss_pred EecCCCCCcceEee-EC----------CC-----cccCc-cceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCC
Confidence 322 2233222 11 11 12344 679999999999999999875322222112 223456765
Q ss_pred CC
Q 010191 280 YP 281 (515)
Q Consensus 280 ~~ 281 (515)
+.
T Consensus 714 a~ 715 (1051)
T KOG3513|consen 714 AA 715 (1051)
T ss_pred CC
Confidence 43
No 140
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=56.53 E-value=20 Score=33.54 Aligned_cols=40 Identities=33% Similarity=0.493 Sum_probs=27.9
Q ss_pred EEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 452 LIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 452 iIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
+|++.|--. |.... + ...++-+-++.++|++++||+|.-.
T Consensus 83 ki~l~HGh~-~~~~~---------~---~~~l~~la~~~~~Dvli~GHTH~p~ 122 (172)
T COG0622 83 KIFLTHGHL-YFVKT---------D---LSLLEYLAKELGADVLIFGHTHKPV 122 (172)
T ss_pred EEEEECCCc-ccccc---------C---HHHHHHHHHhcCCCEEEECCCCccc
Confidence 688888654 32110 1 4466667778899999999999854
No 141
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.39 E-value=16 Score=39.18 Aligned_cols=70 Identities=9% Similarity=0.255 Sum_probs=45.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|+++.||....- ...++.++.+-++....|+++.+|++...+....+|..+.+-...+ .+|.|+.-
T Consensus 6 ~kILv~Gd~~Gr~-----------~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~v--PiptY~~g 72 (528)
T KOG2476|consen 6 AKILVCGDVEGRF-----------DELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKV--PIPTYFLG 72 (528)
T ss_pred ceEEEEcCccccH-----------HHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccC--ceeEEEec
Confidence 6899999983211 1123444555555566999999999996555566666665444433 67888877
Q ss_pred CCC
Q 010191 367 GNH 369 (515)
Q Consensus 367 GNH 369 (515)
+|-
T Consensus 73 ~~~ 75 (528)
T KOG2476|consen 73 DNA 75 (528)
T ss_pred CCC
Confidence 775
No 142
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=53.37 E-value=40 Score=33.40 Aligned_cols=66 Identities=23% Similarity=0.352 Sum_probs=36.6
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCC--CCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCC--EEE
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YMI 364 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~--pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP--~~~ 364 (515)
+.+.||+|.. ..-+.++.+--.. -.=-++.||.+ ++|+.+. +.|+=. --+..+.| +..
T Consensus 45 vtvcGDIHGQ---------------f~Dllelf~igG~~~~t~YLFLGDyV-DRG~~Sv-Et~lLL-l~lK~rYP~ritL 106 (303)
T KOG0372|consen 45 VTVCGDIHGQ---------------FYDLLELFRIGGDVPETNYLFLGDYV-DRGYYSV-ETFLLL-LALKVRYPDRITL 106 (303)
T ss_pred cEEeecccch---------------HHHHHHHHHhCCCCCCCceEeecchh-ccccchH-HHHHHH-HHHhhcCcceeEE
Confidence 6789999742 2334455543111 12467889999 5565331 233211 11222333 688
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 107 iRGNHEsR 114 (303)
T KOG0372|consen 107 IRGNHESR 114 (303)
T ss_pred eeccchhh
Confidence 99999975
No 143
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=52.94 E-value=45 Score=32.47 Aligned_cols=65 Identities=22% Similarity=0.432 Sum_probs=37.5
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh---cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCC--EE
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YM 363 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~---~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP--~~ 363 (515)
+-+.||+|.. .--+.++.+. .++.. -++.||.+ ++|+.+ .+. +..+--+.++.| +-
T Consensus 48 VTvCGDIHGQ---------------FyDL~eLFrtgG~vP~tn-YiFmGDfV-DRGyyS-LEt-fT~l~~LkaryP~~IT 108 (306)
T KOG0373|consen 48 VTVCGDIHGQ---------------FYDLLELFRTGGQVPDTN-YIFMGDFV-DRGYYS-LET-FTLLLLLKARYPAKIT 108 (306)
T ss_pred eeEeeccchh---------------HHHHHHHHHhcCCCCCcc-eEEecccc-cccccc-HHH-HHHHHHHhhcCCceeE
Confidence 5688999642 2345555554 23333 45679999 556533 122 233333444444 56
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
...||||.+
T Consensus 109 LlRGNHEsR 117 (306)
T KOG0373|consen 109 LLRGNHESR 117 (306)
T ss_pred Eeeccchhh
Confidence 789999975
No 144
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.31 E-value=19 Score=32.82 Aligned_cols=26 Identities=42% Similarity=0.622 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcCCeEEEeCccccccc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
.+.|.-|-++..||+.++||+|.+|-
T Consensus 96 ~~sL~~LaRqldvDILl~G~Th~f~A 121 (183)
T KOG3325|consen 96 PESLALLARQLDVDILLTGHTHKFEA 121 (183)
T ss_pred HHHHHHHHHhcCCcEEEeCCceeEEE
Confidence 34666667789999999999999874
No 145
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=45.22 E-value=27 Score=36.27 Aligned_cols=23 Identities=22% Similarity=0.387 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhcCCeEEEeCccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVH 501 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H 501 (515)
+.+.+++++.+.++|+++-||.=
T Consensus 232 g~~~v~~f~~~~~ldlivRaHqv 254 (331)
T KOG0374|consen 232 GPAVVEDFCKKLDLDLIVRAHQV 254 (331)
T ss_pred cHHHHHHHHHHhCcceEEEcCcc
Confidence 36788999999999999999963
No 146
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=42.77 E-value=38 Score=34.03 Aligned_cols=50 Identities=20% Similarity=0.363 Sum_probs=34.1
Q ss_pred HHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCe-EEEeCcccc
Q 010191 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVD-IAVFGHVHN 502 (515)
Q Consensus 435 ~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vd-lvlsGH~H~ 502 (515)
+.|+.+|+...+-.-| +.-.|.|= ..+ -+.+.+|+++|+.| |||.||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~E---------------~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCKE---------------KEM-PEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEecc---------------hhc-hHHHHHHHHHhCCCEEEEeCchhh
Confidence 4689999886544444 33333331 122 67899999999999 899999843
No 147
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=39.70 E-value=73 Score=31.86 Aligned_cols=66 Identities=23% Similarity=0.293 Sum_probs=36.0
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc-CCCC-EEEEcCccccCCCchhHHHHHHHHHhhhhcC--CCEEE
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-KNID-IVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYMI 364 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~-~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~--vP~~~ 364 (515)
+.+.||.|-. ..-+-++.+.- ..|| -.++.||.+ +.|+.+ ++-...+-.+.-+ --+-.
T Consensus 62 vtvcGDvHGq---------------f~dl~ELfkiGG~~pdtnylfmGDyv-drGy~S--vetVS~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQ---------------FHDLIELFKIGGLAPDTNYLFMGDYV-DRGYYS--VETVSLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchh---------------HHHHHHHHHccCCCCCcceeeeeeec-ccccch--HHHHHHHHHhhccccceeEE
Confidence 6789999642 23344555421 1244 356789999 555543 2222222222212 23678
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
++||||..
T Consensus 124 lrGNHEsr 131 (319)
T KOG0371|consen 124 LRGNHESR 131 (319)
T ss_pred ecCchHHH
Confidence 99999964
No 148
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=38.50 E-value=89 Score=31.25 Aligned_cols=72 Identities=14% Similarity=0.156 Sum_probs=51.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch-hHH--HHHHHHHhhhhcCCCE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI-SQW--DQFTAQIEPIASTVPY 362 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~-~~w--d~f~~~i~~l~~~vP~ 362 (515)
..+|++.+|.+... .-..++.+++ .+|+++++.|=.+|--|+. .+| +.-.+.++.+.+..+-
T Consensus 176 ~~~i~faSDvqGp~-------------~~~~l~~i~e--~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~ 240 (304)
T COG2248 176 KSSIVFASDVQGPI-------------NDEALEFILE--KRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNA 240 (304)
T ss_pred CeEEEEcccccCCC-------------ccHHHHHHHh--cCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcc
Confidence 46888899986432 2256788887 5899999999999866653 223 3345667777777777
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
-.++.-|=..
T Consensus 241 ~lViDHHllR 250 (304)
T COG2248 241 TLVIDHHLLR 250 (304)
T ss_pred eEEEeehhhc
Confidence 7777777654
No 149
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=38.11 E-value=43 Score=27.87 Aligned_cols=19 Identities=21% Similarity=0.277 Sum_probs=15.1
Q ss_pred EEEecCCCCCCEEEEEece
Q 010191 242 TGFLRELWPNAMYTYKLGH 260 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~ 260 (515)
.++|.+|+|++.|..+|..
T Consensus 68 ~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEES--TTSEEEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEE
Confidence 4579999999999999987
No 150
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=37.15 E-value=57 Score=32.99 Aligned_cols=50 Identities=20% Similarity=0.387 Sum_probs=33.9
Q ss_pred HHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCe-EEEeCcccc
Q 010191 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVD-IAVFGHVHN 502 (515)
Q Consensus 435 ~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vd-lvlsGH~H~ 502 (515)
+.|+.+|+....-.-| ..-.|.|= ..+ -+.+..|+.+++.| |||.||+=.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~E---------------~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVPE---------------KEQ-PEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEech---------------HHh-hHHHHHHHHHcCCCEEEEeCchhh
Confidence 4689999876433333 33333331 122 67899999999999 899999864
No 151
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=36.44 E-value=1e+02 Score=31.49 Aligned_cols=20 Identities=20% Similarity=0.247 Sum_probs=16.5
Q ss_pred EEEecCCCCCCEEEEEecee
Q 010191 242 TGFLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~ 261 (515)
.-+|.+|+|+|+||+-|..-
T Consensus 16 ~~t~~~L~p~t~YyfdVF~v 35 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVFVV 35 (300)
T ss_pred eEEeccCCCCCeEEEEEEEE
Confidence 34678999999999999754
No 152
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=35.05 E-value=52 Score=27.60 Aligned_cols=24 Identities=21% Similarity=0.404 Sum_probs=20.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEece
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGH 260 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~ 260 (515)
.+-+.++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 355788899999999999999964
No 153
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=34.14 E-value=27 Score=38.95 Aligned_cols=50 Identities=28% Similarity=0.431 Sum_probs=31.2
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCC
Q 010191 317 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDW 373 (515)
Q Consensus 317 ~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~ 373 (515)
+..++++ -.+|-+-++|||.+ +|... |.. |+.+...--+=+-|||||.-|
T Consensus 176 l~~lIqr-L~VDhLHIvGDIyD-RGp~p--d~I---mD~Lm~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 176 LSELIQR-LAVDHLHIVGDIYD-RGPRP--DKI---MDRLMNYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHH-HhhhheeecccccC-CCCCh--hHH---HHHHhcCCCccccccchHHHH
Confidence 3344443 35788999999984 45322 333 334444455678899999765
No 154
>TIGR02039 CysD sulfate adenylyltransferase, small subunit. In Escherichia coli, ATP sulfurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulfur-containing amino acids. Homologous to this E.coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulfurase and APS kinase activity, yet are involved in Nod factor sulfation, and sulfation of other macromolecules.
Probab=31.85 E-value=1.6e+02 Score=30.03 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=42.0
Q ss_pred EEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEE
Q 010191 416 FRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495 (515)
Q Consensus 416 v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdlv 495 (515)
+.++.+||...| .+.+++.++.-+.. +.+.+++.......+....+..........+-++.|...+.++++|++
T Consensus 50 ~~vl~IDTG~~F---~Et~efrd~~a~~~---gl~l~v~~~~~~~~~g~~~~~~~~~~~c~vlK~~pL~~al~e~g~da~ 123 (294)
T TIGR02039 50 FPLLHVDTGWKF---REMIAFRDHMVAKY---GLRLIVHSNEEGIADGINPFTEGSALHTDIMKTEALRQALDKNQFDAA 123 (294)
T ss_pred eEEEEEecCCCC---HHHHHHHHHHHHHh---CCCEEEEechhhhhcCccccccChHHHhhHHHHHHHHHHHHHcCCCEE
Confidence 567889998765 36777776655543 344233221111111111111000001111224678888899999999
Q ss_pred EeCcc
Q 010191 496 VFGHV 500 (515)
Q Consensus 496 lsGH~ 500 (515)
|.||.
T Consensus 124 itG~R 128 (294)
T TIGR02039 124 FGGAR 128 (294)
T ss_pred EecCC
Confidence 99985
No 155
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.12 E-value=69 Score=25.78 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=18.3
Q ss_pred CeEEEEEecCCCCCCEEEEEec
Q 010191 238 GYIHTGFLRELWPNAMYTYKLG 259 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~ 259 (515)
+-++++.+.++ +|..|.|+|.
T Consensus 39 ~G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 39 DGWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred CcEEEEEeCCC-CCCeEEEEEC
Confidence 34778899999 9999999997
No 156
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=29.19 E-value=71 Score=26.53 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=20.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEece
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGH 260 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~ 260 (515)
.+-++++.+.++.+|..|.|+|..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 345788999999999999999964
No 157
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=29.18 E-value=66 Score=27.67 Aligned_cols=23 Identities=26% Similarity=0.576 Sum_probs=20.2
Q ss_pred CeEEEEEecCCCCCCEEEEEece
Q 010191 238 GYIHTGFLRELWPNAMYTYKLGH 260 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~ 260 (515)
+-++++.+.++.+|+.|.|+|..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45788999999999999999973
No 158
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=29.06 E-value=64 Score=29.75 Aligned_cols=19 Identities=16% Similarity=0.057 Sum_probs=15.5
Q ss_pred EEecCCCCCCEEEEEecee
Q 010191 243 GFLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~ 261 (515)
-.+++|.|||+|+.+.-..
T Consensus 104 YqVtNL~pGTkY~isY~Vt 122 (184)
T PF07353_consen 104 YQVTNLQPGTKYYISYLVT 122 (184)
T ss_pred EEeeccCCCcEEEEEEEEe
Confidence 3579999999998777654
No 159
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=28.92 E-value=3e+02 Score=23.05 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=19.2
Q ss_pred HHHHHHHHHhcCCeEEEeCcccc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+....+++++|+++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 56788888999999998888765
No 160
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional
Probab=23.55 E-value=2.7e+02 Score=28.47 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=43.3
Q ss_pred EEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEE
Q 010191 416 FRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495 (515)
Q Consensus 416 v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdlv 495 (515)
+.++.+||...+ .+-++++++..+.. +.+.+++.....+......+..........+-+..|...+.+++++.+
T Consensus 58 ~~vl~iDTG~~F---pEt~ef~d~~a~~~---gl~l~v~~~~~~i~~g~~~~~~~~~~cC~~lK~~pL~~al~e~g~da~ 131 (301)
T PRK05253 58 FPLLHVDTGWKF---PEMIEFRDRRAKEL---GLELIVHSNPEGIARGINPFRHGSAKHTNAMKTEGLKQALEKYGFDAA 131 (301)
T ss_pred eeEEEEeCCCCC---HHHHHHHHHHHHHh---CCCEEEEeChHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 567889998765 35566766665553 455333322211100000000000001111224677788888999999
Q ss_pred EeCccccc
Q 010191 496 VFGHVHNY 503 (515)
Q Consensus 496 lsGH~H~Y 503 (515)
+.||...=
T Consensus 132 ~~G~RrDE 139 (301)
T PRK05253 132 FGGARRDE 139 (301)
T ss_pred Eeccccch
Confidence 99997653
No 161
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=23.43 E-value=46 Score=30.54 Aligned_cols=19 Identities=16% Similarity=0.190 Sum_probs=15.3
Q ss_pred cCCeEEEeCcccccccccc
Q 010191 490 YKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 490 ~~VdlvlsGH~H~YeRt~p 508 (515)
.+.+++++||+|......+
T Consensus 124 ~~~d~vi~GHtH~~~~~~~ 142 (168)
T cd07390 124 DRGSWNLHGHIHSNSPDIG 142 (168)
T ss_pred CCCeEEEEeeeCCCCCCCC
Confidence 4568999999999876644
No 162
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=20.92 E-value=3.8e+02 Score=31.48 Aligned_cols=120 Identities=10% Similarity=0.011 Sum_probs=64.4
Q ss_pred CCcceeeecC-CCCeEEEEEEeCCCCC--CCc-cEEEEccCCCCcceecCcceEEeccccCCCCCccc-------cccCC
Q 010191 169 PVYPRLAQGK-VWNEMTVTWTSGYGIN--EAE-PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTV-------GWRDP 237 (515)
Q Consensus 169 P~~~~La~~~-~~~~m~V~W~t~~~~~--~~~-~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~-------g~~~~ 237 (515)
++..+++.+. +.+++.+.|..-.... .-. -.+.|.+.+.. ..+.++..+-||.---.. +--..
T Consensus 489 ~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~q------NvT~~dg~~aCg~~~W~~~~v~~~~~~p~~ 562 (1025)
T KOG4258|consen 489 DLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQ------NVTEEDGRDACGSNSWNVVDVDPPDLIPND 562 (1025)
T ss_pred cceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCcc------ccceecCccccccCcceEEeccCCcCCCcc
Confidence 4445555544 4788888986643210 011 13344444311 123366666676311000 00001
Q ss_pred CeEEEEEecCCCCCCEEEEEeceec----CCCcccccceEEEEcCCCCCCCCceEEEEEeec
Q 010191 238 GYIHTGFLRELWPNAMYTYKLGHRL----FNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDM 295 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~----~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~ 295 (515)
++.-...|.||+|.|+|.|-|.... .+.-...|++..++|.|... ..++.++.-++.
T Consensus 563 ~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~P-spPl~~ls~sns 623 (1025)
T KOG4258|consen 563 GTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIP-SPPLDVLSKSNS 623 (1025)
T ss_pred ccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCC-CCcchhhhccCc
Confidence 2333678999999999999997651 11112568999999987543 334555555554
Done!