Query 010193
Match_columns 515
No_of_seqs 312 out of 1969
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 22:08:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010193.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010193hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02854 3-ketoacyl-CoA syntha 100.0 1E-119 3E-124 964.9 46.6 512 1-514 1-519 (521)
2 PLN02192 3-ketoacyl-CoA syntha 100.0 7E-120 1E-124 965.1 41.2 496 19-514 10-506 (511)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 2E-116 5E-121 940.0 45.7 497 18-514 5-501 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 3E-109 6E-114 880.7 41.8 470 45-514 2-477 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 2.2E-99 5E-104 796.3 40.2 430 84-513 33-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.9E-77 4.2E-82 593.6 24.2 290 103-392 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 9.8E-56 2.1E-60 449.2 24.7 321 109-491 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 1.7E-51 3.7E-56 433.1 30.5 347 109-491 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 2.5E-51 5.3E-56 428.6 30.0 344 111-488 2-361 (361)
10 PLN03168 chalcone synthase; Pr 100.0 1.8E-50 3.9E-55 425.2 30.8 349 109-493 14-388 (389)
11 PLN03169 chalcone synthase fam 100.0 3.6E-50 7.7E-55 423.6 30.3 351 105-491 16-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 2.8E-50 6.1E-55 423.6 29.3 348 109-492 15-388 (391)
13 PLN03171 chalcone synthase-lik 100.0 8.3E-49 1.8E-53 414.1 31.7 350 108-493 20-397 (399)
14 PLN03170 chalcone synthase; Pr 100.0 5.2E-49 1.1E-53 415.5 28.3 349 109-492 19-392 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 7.2E-48 1.6E-52 396.8 31.0 322 110-490 3-326 (326)
16 COG3424 BcsA Predicted naringe 100.0 4.6E-48 1E-52 378.9 24.1 346 111-492 2-354 (356)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 5.2E-47 1.1E-51 394.8 29.6 331 107-492 4-340 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 5.1E-47 1.1E-51 398.7 29.7 332 109-490 46-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 1.2E-45 2.6E-50 380.7 30.5 325 109-490 3-329 (329)
20 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 1.1E-45 2.4E-50 380.9 29.3 321 110-490 2-325 (326)
21 PRK12879 3-oxoacyl-(acyl carri 100.0 2.9E-45 6.2E-50 376.8 31.4 317 109-490 3-324 (325)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 4.3E-45 9.4E-50 377.8 28.2 318 109-490 4-338 (338)
23 PRK06840 hypothetical protein; 100.0 4.4E-44 9.5E-49 370.7 30.8 331 108-491 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 3.4E-44 7.4E-49 367.4 29.1 319 110-488 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 6.5E-44 1.4E-48 365.9 28.9 315 110-490 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 2.8E-42 6.1E-47 353.7 29.9 317 109-491 2-319 (319)
27 PRK04262 hypothetical protein; 100.0 3.1E-42 6.7E-47 358.4 27.2 310 110-495 2-313 (347)
28 PRK06816 3-oxoacyl-(acyl carri 100.0 1E-41 2.3E-46 358.3 30.8 345 110-491 2-378 (378)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 2.9E-41 6.4E-46 350.8 26.0 315 111-504 2-319 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 3.5E-40 7.6E-45 346.0 29.8 346 110-490 2-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 3.3E-39 7.2E-44 331.0 24.9 320 110-488 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1.1E-35 2.4E-40 312.7 28.5 307 111-492 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 8.3E-34 1.8E-38 302.0 26.3 312 107-492 1-372 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 6.8E-32 1.5E-36 276.0 22.8 309 110-495 2-315 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1E-31 2.2E-36 285.7 22.6 311 110-493 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 5.8E-32 1.3E-36 262.3 15.4 203 105-309 9-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 8.2E-28 1.8E-32 237.8 16.8 237 185-488 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 6.9E-25 1.5E-29 225.4 15.1 251 185-488 11-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 2.3E-19 4.9E-24 166.7 13.1 167 107-308 1-172 (174)
40 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 1.4E-19 2.9E-24 152.2 6.9 83 405-490 8-90 (90)
41 PF02797 Chal_sti_synt_C: Chal 99.8 6.1E-19 1.3E-23 162.2 10.0 118 346-491 25-150 (151)
42 KOG1393 Hydroxymethylglutaryl- 99.7 3.4E-16 7.4E-21 158.1 19.3 318 107-496 8-382 (462)
43 PRK06147 3-oxoacyl-(acyl carri 99.7 8.2E-16 1.8E-20 160.4 19.8 310 110-492 4-344 (348)
44 TIGR02845 spore_V_AD stage V s 99.7 1.4E-15 2.9E-20 154.1 18.8 116 185-310 50-173 (327)
45 PRK08304 stage V sporulation p 99.6 1.4E-13 3E-18 139.9 19.2 117 185-310 56-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 6.5E-13 1.4E-17 140.6 18.9 184 109-310 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 1.1E-12 2.4E-17 138.7 20.4 93 185-278 22-115 (386)
48 PF08545 ACP_syn_III: 3-Oxoacy 99.4 2.9E-13 6.4E-18 111.4 6.5 79 240-330 1-79 (80)
49 PRK05656 acetyl-CoA acetyltran 99.4 1.7E-11 3.7E-16 130.0 21.2 94 185-279 26-120 (393)
50 TIGR01930 AcCoA-C-Actrans acet 99.4 9.1E-12 2E-16 131.8 18.7 94 185-279 21-115 (386)
51 PRK09051 beta-ketothiolase; Pr 99.4 2.6E-11 5.6E-16 128.6 21.8 94 185-279 27-122 (394)
52 PRK08313 acetyl-CoA acetyltran 99.4 5.1E-11 1.1E-15 126.1 22.4 92 185-278 24-117 (386)
53 PRK06064 acetyl-CoA acetyltran 99.4 8.2E-11 1.8E-15 124.6 22.3 92 185-278 22-116 (389)
54 cd00829 SCP-x_thiolase Thiolas 99.4 6.4E-11 1.4E-15 124.5 20.9 93 185-279 16-109 (375)
55 PRK09052 acetyl-CoA acetyltran 99.3 1.1E-10 2.4E-15 123.9 21.6 94 185-279 31-127 (399)
56 smart00825 PKS_KS Beta-ketoacy 99.3 6.3E-11 1.4E-15 126.5 18.2 122 184-310 86-247 (424)
57 PRK12578 acetyl-CoA acetyltran 99.3 3E-10 6.5E-15 120.2 23.1 92 185-278 21-113 (385)
58 PRK05790 putative acyltransfer 99.3 5E-10 1.1E-14 118.8 22.1 93 185-278 26-119 (393)
59 PRK06954 acetyl-CoA acetyltran 99.3 3.5E-10 7.7E-15 120.1 20.1 94 185-279 31-125 (397)
60 cd00828 elong_cond_enzymes "el 99.3 2.6E-10 5.6E-15 121.2 19.1 123 184-310 71-243 (407)
61 PRK06501 3-oxoacyl-(acyl carri 99.3 1.2E-09 2.5E-14 117.2 24.1 119 185-310 75-257 (425)
62 PRK12404 stage V sporulation p 99.2 3.6E-10 7.8E-15 114.6 18.6 116 185-309 54-176 (334)
63 PRK06025 acetyl-CoA acetyltran 99.2 5.9E-10 1.3E-14 118.3 21.2 94 185-279 29-124 (417)
64 TIGR03150 fabF beta-ketoacyl-a 99.2 4.4E-10 9.5E-15 119.3 20.3 120 185-309 71-242 (407)
65 PRK06445 acetyl-CoA acetyltran 99.2 6.5E-10 1.4E-14 118.0 20.3 91 185-278 32-126 (394)
66 cd00833 PKS polyketide synthas 99.2 1.5E-09 3.3E-14 115.4 21.3 121 184-310 86-247 (421)
67 PRK07661 acetyl-CoA acetyltran 99.2 1.9E-09 4.1E-14 114.3 21.2 94 185-279 27-122 (391)
68 PRK06158 thiolase; Provisional 99.2 2.8E-09 6E-14 112.9 21.0 87 185-276 28-115 (384)
69 PRK06690 acetyl-CoA acetyltran 99.2 2.6E-09 5.6E-14 112.0 20.4 90 185-279 25-114 (361)
70 PRK07314 3-oxoacyl-(acyl carri 99.1 3.9E-09 8.5E-14 112.4 21.7 184 109-309 2-243 (411)
71 PLN02287 3-ketoacyl-CoA thiola 99.1 4.8E-09 1.1E-13 113.0 21.5 94 185-279 71-166 (452)
72 PRK07108 acetyl-CoA acetyltran 99.1 3.6E-10 7.8E-15 119.8 11.5 94 185-279 27-122 (392)
73 PRK08256 lipid-transfer protei 99.1 8.8E-09 1.9E-13 109.3 21.6 89 185-278 22-111 (391)
74 PLN02644 acetyl-CoA C-acetyltr 99.1 1.2E-08 2.6E-13 108.4 22.1 93 185-278 25-118 (394)
75 PRK07103 polyketide beta-ketoa 99.1 1.1E-08 2.4E-13 109.2 21.0 121 185-310 80-251 (410)
76 PRK06333 3-oxoacyl-(acyl carri 99.1 1.3E-08 2.8E-13 109.0 21.4 122 184-310 81-256 (424)
77 PRK06633 acetyl-CoA acetyltran 99.1 9.7E-09 2.1E-13 108.9 19.3 94 185-279 27-121 (392)
78 PRK06205 acetyl-CoA acetyltran 99.0 7.7E-10 1.7E-14 117.8 10.4 94 185-279 26-120 (404)
79 PRK08235 acetyl-CoA acetyltran 99.0 9.1E-10 2E-14 116.9 10.9 94 185-279 26-120 (393)
80 PRK08242 acetyl-CoA acetyltran 99.0 1.4E-09 3E-14 115.6 11.2 94 185-279 28-123 (402)
81 PRK08722 3-oxoacyl-(acyl carri 99.0 5E-08 1.1E-12 104.3 21.9 121 185-310 74-246 (414)
82 PRK08439 3-oxoacyl-(acyl carri 99.0 1.1E-07 2.4E-12 101.4 24.3 122 184-310 71-244 (406)
83 PRK06059 lipid-transfer protei 99.0 2.3E-09 5E-14 114.0 10.4 93 185-279 23-117 (399)
84 PRK08170 acetyl-CoA acetyltran 99.0 3.2E-09 6.9E-14 113.9 11.1 94 185-279 27-121 (426)
85 PRK07801 acetyl-CoA acetyltran 98.9 7.2E-08 1.6E-12 102.1 19.7 93 185-278 26-120 (382)
86 cd00826 nondecarbox_cond_enzym 98.9 5.3E-09 1.1E-13 111.1 10.8 93 185-279 23-117 (393)
87 PRK09116 3-oxoacyl-(acyl carri 98.9 1.4E-07 3E-12 100.6 20.3 188 109-309 2-244 (405)
88 PRK06065 acetyl-CoA acetyltran 98.8 9.9E-09 2.2E-13 108.9 10.0 91 185-277 29-121 (392)
89 PF00108 Thiolase_N: Thiolase, 98.8 1.1E-08 2.5E-13 102.8 10.0 95 185-280 26-121 (264)
90 PLN02836 3-oxoacyl-[acyl-carri 98.8 4E-07 8.7E-12 98.1 22.1 121 185-310 93-267 (437)
91 PRK05952 3-oxoacyl-(acyl carri 98.8 2.3E-07 4.9E-12 98.2 19.4 243 188-489 59-380 (381)
92 PRK08257 acetyl-CoA acetyltran 98.8 8.1E-07 1.8E-11 97.1 23.2 92 185-278 27-120 (498)
93 PTZ00050 3-oxoacyl-acyl carrie 98.8 5.2E-07 1.1E-11 96.7 21.2 251 185-489 77-419 (421)
94 PRK09185 3-oxoacyl-(acyl carri 98.8 9.6E-07 2.1E-11 93.8 22.9 205 221-490 137-390 (392)
95 cd00832 CLF Chain-length facto 98.8 1E-06 2.2E-11 93.9 23.1 120 185-310 71-241 (399)
96 PLN02787 3-oxoacyl-[acyl-carri 98.8 8.2E-07 1.8E-11 97.7 22.9 120 185-310 199-373 (540)
97 PRK07967 3-oxoacyl-(acyl carri 98.8 9E-07 2E-11 94.5 22.5 187 109-310 2-244 (406)
98 PRK13359 beta-ketoadipyl CoA t 98.7 7.3E-08 1.6E-12 102.5 11.1 94 185-279 26-122 (400)
99 PRK08963 fadI 3-ketoacyl-CoA t 98.7 5E-08 1.1E-12 104.7 9.9 94 185-279 29-123 (428)
100 PRK07910 3-oxoacyl-(acyl carri 98.7 2E-06 4.4E-11 92.1 22.2 186 109-310 12-254 (418)
101 PRK07516 acetyl-CoA acetyltran 98.7 5.3E-08 1.1E-12 103.3 9.9 92 185-278 22-116 (389)
102 PRK07851 acetyl-CoA acetyltran 98.7 7.7E-08 1.7E-12 102.6 10.8 93 185-279 27-122 (406)
103 PRK06289 acetyl-CoA acetyltran 98.7 8.1E-08 1.7E-12 102.4 10.1 90 185-278 26-121 (403)
104 PRK07850 acetyl-CoA acetyltran 98.6 1.2E-07 2.7E-12 100.4 10.8 94 185-279 26-121 (387)
105 PRK09050 beta-ketoadipyl CoA t 98.6 1.3E-07 2.7E-12 100.8 10.4 94 185-279 26-122 (401)
106 PRK08131 acetyl-CoA acetyltran 98.6 1.6E-07 3.4E-12 100.1 11.0 94 185-279 26-121 (401)
107 PRK06366 acetyl-CoA acetyltran 98.6 1.9E-07 4.2E-12 99.0 10.7 94 185-279 26-120 (388)
108 TIGR02430 pcaF beta-ketoadipyl 98.6 1.9E-07 4.1E-12 99.4 10.6 94 185-279 25-121 (400)
109 PF00109 ketoacyl-synt: Beta-k 98.6 1.5E-07 3.3E-12 93.2 9.0 120 184-308 86-251 (254)
110 TIGR02446 FadI fatty oxidation 98.6 1.9E-07 4.1E-12 100.3 9.7 94 185-279 31-125 (430)
111 PRK06504 acetyl-CoA acetyltran 98.5 4E-07 8.7E-12 96.6 10.8 94 185-279 26-121 (390)
112 PRK06157 acetyl-CoA acetyltran 98.5 4E-07 8.7E-12 96.9 10.8 93 185-279 27-120 (398)
113 PRK08947 fadA 3-ketoacyl-CoA t 98.5 3.9E-07 8.5E-12 96.6 9.9 94 185-279 27-123 (387)
114 PRK06066 acetyl-CoA acetyltran 98.5 1.3E-05 2.9E-10 84.9 21.2 89 185-278 25-116 (385)
115 PRK14691 3-oxoacyl-(acyl carri 98.5 4.1E-06 8.9E-11 87.4 16.8 121 185-310 4-174 (342)
116 PRK06519 3-oxoacyl-(acyl carri 98.5 9.1E-06 2E-10 86.6 19.6 183 108-310 5-255 (398)
117 PRK06365 acetyl-CoA acetyltran 98.5 5.9E-07 1.3E-11 96.6 10.3 92 185-278 37-130 (430)
118 PTZ00455 3-ketoacyl-CoA thiola 98.5 7.7E-07 1.7E-11 95.8 11.2 94 185-279 48-152 (438)
119 TIGR02445 fadA fatty oxidation 98.4 6.1E-07 1.3E-11 95.1 8.9 94 185-279 25-121 (385)
120 PRK09268 acetyl-CoA acetyltran 98.4 1.5E-06 3.4E-11 93.2 10.9 94 185-279 31-125 (427)
121 PF07451 SpoVAD: Stage V sporu 98.4 1E-05 2.3E-10 81.3 15.1 117 185-310 51-174 (329)
122 PRK07937 lipid-transfer protei 98.3 8.5E-05 1.8E-09 77.9 20.6 88 186-278 25-114 (352)
123 TIGR02813 omega_3_PfaA polyket 98.3 4.3E-05 9.4E-10 96.8 21.4 252 185-491 93-462 (2582)
124 PRK08142 acetyl-CoA acetyltran 98.1 1.1E-05 2.4E-10 85.6 10.0 88 185-277 25-112 (388)
125 COG0304 FabB 3-oxoacyl-(acyl-c 98.0 0.00031 6.7E-09 75.0 19.0 122 183-311 69-245 (412)
126 PRK07855 lipid-transfer protei 98.0 2.8E-05 6.1E-10 82.5 9.7 85 185-274 24-108 (386)
127 KOG1389 3-oxoacyl CoA thiolase 98.0 0.00015 3.2E-09 73.0 13.6 95 185-280 61-156 (435)
128 COG3321 Polyketide synthase mo 97.6 0.0022 4.7E-08 76.3 18.2 188 109-309 4-250 (1061)
129 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00028 6.1E-09 75.1 9.2 95 185-280 27-125 (392)
130 KOG1390 Acetyl-CoA acetyltrans 97.3 0.00057 1.2E-08 69.1 7.4 94 185-279 30-124 (396)
131 PF08540 HMG_CoA_synt_C: Hydro 97.0 0.00044 9.4E-09 70.2 3.3 60 434-493 143-204 (282)
132 KOG1406 Peroxisomal 3-ketoacyl 96.9 0.0013 2.8E-08 65.1 5.3 89 186-279 30-119 (408)
133 KOG1394 3-oxoacyl-(acyl-carrie 95.6 0.093 2E-06 54.3 10.4 120 184-310 93-269 (440)
134 PF08541 ACP_syn_III_C: 3-Oxoa 94.5 0.038 8.3E-07 45.9 3.5 76 197-276 1-79 (90)
135 KOG1391 Acetyl-CoA acetyltrans 94.5 0.07 1.5E-06 52.9 5.7 92 185-279 28-123 (396)
136 PRK06025 acetyl-CoA acetyltran 94.3 0.13 2.8E-06 55.2 7.7 91 190-307 318-416 (417)
137 PRK06816 3-oxoacyl-(acyl carri 93.6 0.33 7E-06 51.5 9.3 89 184-276 269-365 (378)
138 TIGR00748 HMG_CoA_syn_Arc hydr 93.5 0.26 5.6E-06 51.6 8.1 83 185-273 206-293 (345)
139 PRK05963 3-oxoacyl-(acyl carri 93.0 0.26 5.7E-06 50.8 7.3 87 181-274 221-313 (326)
140 PRK09258 3-oxoacyl-(acyl carri 93.0 0.34 7.4E-06 50.1 8.1 90 180-276 232-327 (338)
141 KOG1392 Acetyl-CoA acetyltrans 92.9 0.084 1.8E-06 53.1 3.2 94 185-279 66-160 (465)
142 PRK12879 3-oxoacyl-(acyl carri 92.2 0.55 1.2E-05 48.2 8.4 85 183-274 221-311 (325)
143 PF13723 Ketoacyl-synt_2: Beta 92.0 3 6.5E-05 40.9 12.7 114 185-310 34-172 (218)
144 PRK07204 3-oxoacyl-(acyl carri 91.9 0.58 1.3E-05 48.3 8.2 84 183-273 226-315 (329)
145 cd00825 decarbox_cond_enzymes 91.9 0.59 1.3E-05 47.9 8.1 78 187-264 205-286 (332)
146 TIGR00747 fabH 3-oxoacyl-(acyl 91.7 0.52 1.1E-05 48.3 7.5 85 183-274 215-305 (318)
147 PRK09352 3-oxoacyl-(acyl carri 91.7 0.44 9.4E-06 48.8 6.9 85 183-274 215-305 (319)
148 PLN02326 3-oxoacyl-[acyl-carri 90.8 0.66 1.4E-05 49.1 7.4 84 183-273 276-365 (379)
149 PRK04262 hypothetical protein; 90.8 0.51 1.1E-05 49.3 6.4 68 187-258 209-281 (347)
150 cd00830 KAS_III Ketoacyl-acyl 90.5 0.84 1.8E-05 46.6 7.6 86 182-274 218-309 (320)
151 PRK13359 beta-ketoadipyl CoA t 90.4 0.96 2.1E-05 48.4 8.2 93 190-307 299-399 (400)
152 PRK06840 hypothetical protein; 90.2 0.85 1.9E-05 47.3 7.5 81 187-274 237-322 (339)
153 cd00327 cond_enzymes Condensin 90.1 1.2 2.6E-05 43.6 8.1 78 187-264 145-226 (254)
154 PRK09050 beta-ketoadipyl CoA t 90.0 1.1 2.4E-05 47.9 8.3 94 189-307 299-400 (401)
155 CHL00203 fabH 3-oxoacyl-acyl-c 89.4 1.3 2.7E-05 45.8 7.9 82 186-274 225-312 (326)
156 PRK07515 3-oxoacyl-(acyl carri 89.0 1.1 2.5E-05 47.1 7.4 87 182-274 266-358 (372)
157 PRK06504 acetyl-CoA acetyltran 88.9 2.9 6.3E-05 44.6 10.4 58 405-463 305-365 (390)
158 TIGR02430 pcaF beta-ketoadipyl 88.9 1.2 2.6E-05 47.7 7.5 77 189-270 298-382 (400)
159 PRK08242 acetyl-CoA acetyltran 88.3 2.8 6.1E-05 44.9 9.8 55 405-460 317-371 (402)
160 PRK07851 acetyl-CoA acetyltran 87.6 2.9 6.3E-05 44.8 9.5 83 406-490 321-404 (406)
161 PRK09052 acetyl-CoA acetyltran 87.3 2 4.2E-05 46.1 7.9 92 189-307 299-398 (399)
162 PRK08235 acetyl-CoA acetyltran 87.1 2.8 6E-05 44.8 8.9 82 406-489 309-391 (393)
163 PRK07850 acetyl-CoA acetyltran 86.6 4.5 9.7E-05 43.1 10.2 83 406-490 303-386 (387)
164 PRK09051 beta-ketothiolase; Pr 86.6 2.7 5.9E-05 44.9 8.5 92 189-307 294-393 (394)
165 PRK06147 3-oxoacyl-(acyl carri 86.4 1.4 3.1E-05 46.1 6.2 87 189-275 236-330 (348)
166 PRK07108 acetyl-CoA acetyltran 86.1 3.3 7.1E-05 44.3 8.8 54 406-460 308-361 (392)
167 PRK06690 acetyl-CoA acetyltran 85.2 3.7 8.1E-05 43.4 8.6 70 188-263 259-336 (361)
168 PRK05656 acetyl-CoA acetyltran 85.0 1.8 3.8E-05 46.2 6.2 50 189-244 293-342 (393)
169 PRK06205 acetyl-CoA acetyltran 84.9 5.7 0.00012 42.5 10.0 84 406-491 316-403 (404)
170 PLN02287 3-ketoacyl-CoA thiola 84.9 3.2 7E-05 45.2 8.2 96 189-310 333-437 (452)
171 PRK07661 acetyl-CoA acetyltran 84.6 2.5 5.4E-05 45.1 7.0 92 189-307 291-390 (391)
172 PRK06445 acetyl-CoA acetyltran 84.2 3 6.4E-05 44.5 7.4 67 189-261 294-368 (394)
173 COG3425 PksG 3-hydroxy-3-methy 83.9 3.9 8.5E-05 43.2 7.9 94 186-307 208-308 (377)
174 PRK06366 acetyl-CoA acetyltran 83.6 6.3 0.00014 42.0 9.5 95 389-491 291-387 (388)
175 PF02803 Thiolase_C: Thiolase, 83.5 2.7 5.9E-05 37.5 5.7 75 189-270 24-106 (123)
176 COG0332 FabH 3-oxoacyl-[acyl-c 83.2 2.1 4.5E-05 44.6 5.5 88 180-273 216-308 (323)
177 PRK06954 acetyl-CoA acetyltran 83.2 1.7 3.6E-05 46.5 5.0 92 189-307 297-396 (397)
178 PRK08947 fadA 3-ketoacyl-CoA t 83.2 9.6 0.00021 40.6 10.8 54 406-460 300-356 (387)
179 cd00831 CHS_like Chalcone and 83.0 2.7 5.8E-05 44.0 6.4 88 183-274 255-350 (361)
180 PRK08963 fadI 3-ketoacyl-CoA t 82.3 8.3 0.00018 41.6 10.0 84 406-490 327-427 (428)
181 PLN03169 chalcone synthase fam 80.3 5.1 0.00011 42.7 7.5 88 184-273 278-374 (391)
182 TIGR02445 fadA fatty oxidation 79.9 21 0.00046 38.0 12.0 81 406-490 298-384 (385)
183 COG1214 Inactive homolog of me 78.5 6.8 0.00015 38.5 7.1 59 186-244 38-97 (220)
184 PRK08257 acetyl-CoA acetyltran 78.5 5.5 0.00012 43.9 7.2 80 189-273 294-382 (498)
185 PRK07516 acetyl-CoA acetyltran 78.4 21 0.00046 37.9 11.4 56 406-462 278-351 (389)
186 cd00827 init_cond_enzymes "ini 76.5 7.1 0.00015 39.8 7.0 92 181-276 217-315 (324)
187 cd00751 thiolase Thiolase are 76.4 8.7 0.00019 40.7 7.8 41 189-234 287-328 (386)
188 PRK07801 acetyl-CoA acetyltran 76.1 5.3 0.00011 42.4 6.0 67 190-262 283-357 (382)
189 TIGR01835 HMG-CoA-S_prok 3-hyd 76.0 6.6 0.00014 41.7 6.7 74 183-257 201-286 (379)
190 PRK08131 acetyl-CoA acetyltran 75.6 16 0.00035 39.1 9.6 55 406-461 314-370 (401)
191 PRK06059 lipid-transfer protei 74.6 31 0.00068 36.7 11.5 67 389-462 279-364 (399)
192 KOG1390 Acetyl-CoA acetyltrans 74.3 4.1 9E-05 42.0 4.3 80 405-489 311-394 (396)
193 PRK06289 acetyl-CoA acetyltran 73.8 24 0.00052 37.7 10.4 86 389-481 282-393 (403)
194 PRK08170 acetyl-CoA acetyltran 73.4 16 0.00036 39.3 9.0 19 292-310 262-280 (426)
195 TIGR01930 AcCoA-C-Actrans acet 72.8 8.5 0.00018 40.9 6.6 48 190-244 289-337 (386)
196 PRK09268 acetyl-CoA acetyltran 72.7 19 0.00042 38.9 9.3 26 188-213 310-335 (427)
197 PRK12880 3-oxoacyl-(acyl carri 72.3 12 0.00025 39.4 7.4 76 183-265 238-317 (353)
198 cd00829 SCP-x_thiolase Thiolas 72.1 12 0.00026 39.2 7.6 44 188-235 252-295 (375)
199 PRK09604 UGMP family protein; 72.0 17 0.00036 37.9 8.4 49 185-233 51-104 (332)
200 PF02801 Ketoacyl-synt_C: Beta 70.7 1 2.2E-05 39.5 -0.8 76 189-264 27-110 (119)
201 PRK05790 putative acyltransfer 70.5 7.6 0.00016 41.3 5.6 68 189-262 293-368 (393)
202 PRK06633 acetyl-CoA acetyltran 70.4 10 0.00022 40.5 6.6 67 189-263 292-368 (392)
203 TIGR03725 bact_YeaZ universal 69.2 8.7 0.00019 37.0 5.2 37 185-221 33-69 (202)
204 TIGR02446 FadI fatty oxidation 68.0 29 0.00062 37.6 9.4 56 406-462 329-401 (430)
205 PRK09185 3-oxoacyl-(acyl carri 67.6 18 0.00039 38.4 7.7 76 189-264 262-340 (392)
206 PRK06064 acetyl-CoA acetyltran 67.2 17 0.00037 38.6 7.4 40 189-233 260-300 (389)
207 cd00826 nondecarbox_cond_enzym 67.0 14 0.00031 39.3 6.8 69 189-262 271-364 (393)
208 cd00834 KAS_I_II Beta-ketoacyl 66.6 9.3 0.0002 40.3 5.3 77 188-264 276-358 (406)
209 PLN02644 acetyl-CoA C-acetyltr 66.3 11 0.00023 40.3 5.7 67 190-262 294-368 (394)
210 PF00814 Peptidase_M22: Glycop 66.0 8.7 0.00019 38.8 4.7 36 186-221 30-65 (268)
211 TIGR00329 gcp_kae1 metallohydr 65.1 20 0.00043 36.8 7.2 36 185-220 48-83 (305)
212 PRK06519 3-oxoacyl-(acyl carri 65.0 18 0.00039 38.8 7.1 44 189-233 282-326 (398)
213 PF02803 Thiolase_C: Thiolase, 64.9 12 0.00026 33.4 4.8 83 405-489 39-122 (123)
214 PRK07314 3-oxoacyl-(acyl carri 64.8 10 0.00022 40.3 5.2 45 189-233 278-323 (411)
215 PRK14878 UGMP family protein; 64.4 13 0.00028 38.6 5.8 52 181-233 41-97 (323)
216 TIGR03150 fabF beta-ketoacyl-a 64.4 11 0.00023 40.0 5.2 45 189-233 277-322 (407)
217 PRK14691 3-oxoacyl-(acyl carri 64.2 16 0.00035 38.2 6.4 46 188-233 207-253 (342)
218 cd00828 elong_cond_enzymes "el 63.6 12 0.00025 39.8 5.3 46 187-232 274-320 (407)
219 PRK08256 lipid-transfer protei 61.5 22 0.00048 37.8 7.0 69 189-261 266-358 (391)
220 PTZ00050 3-oxoacyl-acyl carrie 61.3 22 0.00047 38.2 6.9 46 188-233 284-331 (421)
221 PTZ00455 3-ketoacyl-CoA thiola 60.6 22 0.00047 38.7 6.8 43 189-235 311-353 (438)
222 PRK00768 nadE NAD synthetase; 60.1 1.9E+02 0.004 29.4 12.9 149 129-303 3-179 (268)
223 PLN02787 3-oxoacyl-[acyl-carri 60.1 20 0.00043 40.1 6.5 45 189-233 407-452 (540)
224 smart00825 PKS_KS Beta-ketoacy 60.0 25 0.00053 37.5 7.1 46 188-233 280-326 (424)
225 PRK12578 acetyl-CoA acetyltran 59.9 20 0.00043 38.0 6.3 41 189-234 259-300 (385)
226 KOG2708 Predicted metalloprote 59.4 20 0.00043 35.5 5.5 87 185-277 49-136 (336)
227 COG0533 QRI7 Metal-dependent p 59.3 27 0.0006 36.5 6.9 86 186-276 51-137 (342)
228 TIGR03723 bact_gcp putative gl 58.4 31 0.00068 35.6 7.3 56 185-244 49-109 (314)
229 cd00832 CLF Chain-length facto 58.3 17 0.00037 38.7 5.5 76 188-264 271-351 (399)
230 TIGR01796 CM_mono_aroH monofun 57.7 28 0.00061 30.7 5.7 53 192-248 25-80 (117)
231 TIGR03722 arch_KAE1 universal 56.6 18 0.00039 37.4 5.2 37 181-218 42-78 (322)
232 PRK07937 lipid-transfer protei 56.5 33 0.00072 36.1 7.2 76 191-272 250-333 (352)
233 PRK05952 3-oxoacyl-(acyl carri 56.1 18 0.00039 38.5 5.1 45 188-232 255-300 (381)
234 PRK07855 lipid-transfer protei 55.6 38 0.00081 36.1 7.5 24 190-213 269-292 (386)
235 PRK06501 3-oxoacyl-(acyl carri 55.6 25 0.00055 37.8 6.3 44 189-232 291-335 (425)
236 PRK06158 thiolase; Provisional 54.6 36 0.00078 36.2 7.1 25 189-213 256-280 (384)
237 KOG1202 Animal-type fatty acid 54.1 37 0.00081 41.1 7.4 124 185-311 87-248 (2376)
238 PRK08722 3-oxoacyl-(acyl carri 53.3 25 0.00055 37.7 5.8 44 189-232 280-324 (414)
239 COG0304 FabB 3-oxoacyl-(acyl-c 53.3 23 0.00051 38.1 5.5 73 189-262 278-355 (412)
240 PRK08304 stage V sporulation p 53.3 58 0.0013 34.1 8.1 87 189-277 210-312 (337)
241 PRK08313 acetyl-CoA acetyltran 51.6 58 0.0013 34.6 8.1 42 188-234 256-300 (386)
242 KOG2707 Predicted metalloprote 50.8 37 0.0008 35.7 6.1 51 184-234 81-136 (405)
243 PRK09116 3-oxoacyl-(acyl carri 50.4 24 0.00053 37.7 5.1 44 189-232 277-321 (405)
244 PRK09605 bifunctional UGMP fam 50.3 27 0.00059 38.7 5.6 37 181-218 45-81 (535)
245 PF01135 PCMT: Protein-L-isoas 50.1 24 0.00051 34.4 4.5 42 445-486 49-90 (209)
246 PRK06365 acetyl-CoA acetyltran 49.7 67 0.0015 34.8 8.3 25 189-213 295-321 (430)
247 PLN03170 chalcone synthase; Pr 47.7 67 0.0015 34.4 7.9 71 183-257 277-353 (401)
248 PRK07910 3-oxoacyl-(acyl carri 47.6 35 0.00076 36.7 5.8 45 189-233 288-333 (418)
249 cd00833 PKS polyketide synthas 47.6 41 0.00089 35.6 6.3 78 187-264 279-365 (421)
250 COG4126 Hydantoin racemase [Am 47.5 1.1E+02 0.0024 30.1 8.5 100 144-264 119-218 (230)
251 cd02185 AroH Chorismate mutase 45.9 66 0.0014 28.5 6.1 54 191-247 24-79 (117)
252 PRK06333 3-oxoacyl-(acyl carri 45.8 46 0.001 35.6 6.4 45 188-232 289-334 (424)
253 PLN03173 chalcone synthase; Pr 45.4 71 0.0015 34.1 7.6 52 182-237 272-323 (391)
254 PRK12404 stage V sporulation p 45.4 89 0.0019 32.7 7.9 87 189-277 208-310 (334)
255 PLN02836 3-oxoacyl-[acyl-carri 44.4 91 0.002 33.7 8.4 44 189-232 301-345 (437)
256 PRK06157 acetyl-CoA acetyltran 42.7 1.1E+02 0.0024 32.7 8.6 41 189-234 268-311 (398)
257 PF07451 SpoVAD: Stage V sporu 42.4 27 0.00059 36.0 3.6 87 189-277 205-307 (329)
258 KOG1389 3-oxoacyl CoA thiolase 41.9 78 0.0017 32.9 6.7 70 191-265 324-400 (435)
259 TIGR02845 spore_V_AD stage V s 40.6 1.2E+02 0.0025 31.8 8.0 87 189-277 204-305 (327)
260 PRK06065 acetyl-CoA acetyltran 40.4 3.6E+02 0.0079 28.7 12.1 56 406-462 282-355 (392)
261 PRK09585 anmK anhydro-N-acetyl 40.2 81 0.0017 33.5 6.9 57 178-234 62-126 (365)
262 PF00195 Chal_sti_synt_N: Chal 40.0 1.3E+02 0.0028 29.8 7.9 68 405-478 119-190 (226)
263 KOG1406 Peroxisomal 3-ketoacyl 40.0 26 0.00057 35.3 3.0 29 185-213 270-298 (408)
264 PLN03171 chalcone synthase-lik 39.7 81 0.0018 33.7 7.0 71 183-258 275-360 (399)
265 PRK06066 acetyl-CoA acetyltran 37.8 80 0.0017 33.7 6.6 24 190-213 259-284 (385)
266 PF07736 CM_1: Chorismate muta 37.4 94 0.002 27.6 5.8 52 189-244 22-76 (118)
267 PTZ00340 O-sialoglycoprotein e 37.0 66 0.0014 33.9 5.6 58 186-244 50-109 (345)
268 PRK13410 molecular chaperone D 36.5 1.1E+02 0.0023 35.3 7.7 74 178-255 300-373 (668)
269 TIGR01991 HscA Fe-S protein as 35.6 1.9E+02 0.0041 32.8 9.4 56 178-234 284-339 (599)
270 PRK05183 hscA chaperone protei 35.0 1.8E+02 0.004 33.0 9.2 56 178-234 300-355 (616)
271 PRK07103 polyketide beta-ketoa 32.4 91 0.002 33.3 6.0 24 190-213 284-307 (410)
272 COG1153 FwdD Formylmethanofura 31.5 45 0.00098 29.6 2.8 50 451-507 31-87 (128)
273 PLN03172 chalcone synthase fam 31.5 1.4E+02 0.003 31.9 7.2 70 184-257 274-349 (393)
274 PLN03184 chloroplast Hsp70; Pr 29.7 1.6E+02 0.0035 33.8 7.8 73 178-254 337-409 (673)
275 COG2518 Pcm Protein-L-isoaspar 29.0 54 0.0012 32.0 3.2 39 445-485 51-89 (209)
276 KOG1394 3-oxoacyl-(acyl-carrie 28.4 62 0.0013 34.2 3.6 45 189-233 303-348 (440)
277 TIGR01743 purR_Bsub pur operon 27.8 5.9E+02 0.013 25.8 10.5 50 99-163 9-58 (268)
278 CHL00094 dnaK heat shock prote 27.7 1.7E+02 0.0037 33.2 7.5 49 185-234 307-355 (621)
279 PTZ00186 heat shock 70 kDa pre 27.4 2.2E+02 0.0048 32.7 8.3 65 187-255 334-398 (657)
280 PRK00290 dnaK molecular chaper 26.8 2E+02 0.0042 32.7 7.7 74 178-255 298-371 (627)
281 TIGR02350 prok_dnaK chaperone 26.5 1.6E+02 0.0036 33.0 7.0 73 178-254 296-368 (595)
282 PRK08329 threonine synthase; V 25.3 68 0.0015 33.6 3.4 34 449-482 312-345 (347)
283 COG2377 Predicted molecular ch 25.1 1.4E+02 0.0031 31.6 5.6 58 177-234 63-130 (371)
284 PRK13411 molecular chaperone D 24.6 2E+02 0.0043 33.0 7.2 55 178-233 299-353 (653)
285 cd01453 vWA_transcription_fact 24.5 2E+02 0.0044 26.9 6.3 81 189-276 29-117 (183)
286 COG3053 CitC Citrate lyase syn 24.1 4.9E+02 0.011 27.0 8.9 105 107-231 209-313 (352)
287 PTZ00009 heat shock 70 kDa pro 23.3 2.3E+02 0.0049 32.5 7.4 64 189-255 315-378 (653)
288 PLN02854 3-ketoacyl-CoA syntha 23.3 3.3E+02 0.0071 30.4 8.3 42 189-234 387-434 (521)
289 PF09663 Amido_AtzD_TrzD: Amid 23.1 2.5E+02 0.0053 29.6 6.8 72 185-262 130-204 (365)
290 TIGR03285 methan_mark_14 putat 21.6 1.7E+02 0.0036 31.1 5.2 35 180-214 60-94 (445)
291 PTZ00400 DnaK-type molecular c 21.0 1.8E+02 0.004 33.3 6.1 47 187-234 348-394 (663)
292 TIGR02813 omega_3_PfaA polyket 20.3 1.6E+02 0.0036 39.2 6.0 75 190-264 318-401 (2582)
No 1
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-119 Score=964.86 Aligned_cols=512 Identities=61% Similarity=1.046 Sum_probs=485.7
Q ss_pred CCCCCCCCCCCCCCCCCccccccccCCCCCccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHhhccChHHHHH
Q 010193 1 MEQSGPTYDSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNL---LTLCFIPLIIITSIQVSEMNIDDLRQ 77 (515)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (515)
|+++++++|+.+.+ ...+.+++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++.+++++|++.
T Consensus 1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (521)
T PLN02854 1 MDKERLTAEMAFKD--SSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSE 78 (521)
T ss_pred CchhhhhHHHhccC--CcceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 78899999998644 23677899999999999999999999999999999 66788999888899999999999988
Q ss_pred HHHH--hhhhhHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHH
Q 010193 78 LWIH--LQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILE 155 (515)
Q Consensus 78 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~ 155 (515)
+|.. +++++++++++++++++++++|+|+||++|||+||+||+|+++++++.+.++|+....|.|++++++||+||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 158 (521)
T PLN02854 79 LWSNQALHLDTATRLTGSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRIST 158 (521)
T ss_pred HHHHhhhHHhHHHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 9987 78889999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCceeecCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC
Q 010193 156 RSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (515)
Q Consensus 156 ~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~ 235 (515)
|||+|++||+|+..++.|++.+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++|+++++|+++||+++
T Consensus 159 ~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~ 238 (521)
T PLN02854 159 RSGLGDETYLPRGITSRPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRT 238 (521)
T ss_pred hcCCCCccccCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccc
Q 010193 236 NIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQA 315 (515)
Q Consensus 236 ~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~ 315 (515)
++.+|||+||||+||++||++|+++++++++++||||++|++|.+||.++||++++++++|||||||+||++++.+++++
T Consensus 239 ~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~ 318 (521)
T PLN02854 239 DIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRS 318 (521)
T ss_pred CceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976554567
Q ss_pred cceeeeEEEEEeccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh
Q 010193 316 KYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR 395 (515)
Q Consensus 316 ~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~ 395 (515)
+|+|.+++++++++|++.|+|+++++|+.|..|+++++++|.+++++++.|++++||.|+|++|+++|+...+.+.+.+.
T Consensus 319 k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~ 398 (521)
T PLN02854 319 KYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKA 398 (521)
T ss_pred chheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999888888999999999999999999999999999999999998888777777777
Q ss_pred hccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEE
Q 010193 396 NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQI 475 (515)
Q Consensus 396 ~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vlli 475 (515)
++++|+|+|++||||||+||+|+++++.++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+
T Consensus 399 gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~i 478 (521)
T PLN02854 399 KVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQI 478 (521)
T ss_pred CCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEChhHhhhheeeEeeccCCCC--CCCCcccccccCCCCCC
Q 010193 476 AFGSGFKCNSAVWQALQNVKPS--HHSPWEDCIDNYPVKLI 514 (515)
Q Consensus 476 afGsG~~~~sav~r~~~~~~~~--~~~~w~~~~~~~p~~~~ 514 (515)
|||+||+||+++|||++++++. .+|||+||||+|||++|
T Consensus 479 aFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~~ 519 (521)
T PLN02854 479 AFGSGFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKVP 519 (521)
T ss_pred EEchhhhhhheeeEEeccCCccccCCCCchhhHhhCCCCCC
Confidence 9999999999999999999865 67999999999999986
No 2
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.8e-120 Score=965.07 Aligned_cols=496 Identities=68% Similarity=1.148 Sum_probs=476.5
Q ss_pred cccccccCCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010193 19 GVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVF 98 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (515)
...+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..+++++++++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (511)
T PLN02192 10 LIEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVF 89 (511)
T ss_pred ccccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34457899999999999999999999999999999999999988899999999999988998888899999989888899
Q ss_pred HHHHHHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcH
Q 010193 99 GLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSM 178 (515)
Q Consensus 99 ~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~ 178 (515)
++++|+|+||++|||+||+||+|+++++++.+.++|+....|.|++++++||+||++|||+|++||+|+..++.|++.+|
T Consensus 90 ~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~ 169 (511)
T PLN02192 90 LSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCM 169 (511)
T ss_pred HHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHH
Q 010193 179 AAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAK 258 (515)
Q Consensus 179 ~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~ 258 (515)
+++|+|+++++++|+++||+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+||++||++|+
T Consensus 170 ~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~ 249 (511)
T PLN02192 170 AEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAK 249 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCccccccee
Q 010193 259 DLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVY 338 (515)
Q Consensus 259 ~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~ 338 (515)
++|+++++++||||++|++|.+||.++||+++++|++|||||||+||++++.++++++|++.+.++++.++|++.|+|++
T Consensus 250 ~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~ 329 (511)
T PLN02192 250 HLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVT 329 (511)
T ss_pred HHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhcccee
Confidence 99999999999999999999999999999999999999999999999997655556789999999999999999999999
Q ss_pred eccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCH
Q 010193 339 QEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGR 418 (515)
Q Consensus 339 ~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~ 418 (515)
+++|++|+.|+.|+||+|.++|++++.|++++||.++|.+|+.++++++.++++++.+++.|+|+++.+|||||+||+|+
T Consensus 330 ~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr 409 (511)
T PLN02192 330 QEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGR 409 (511)
T ss_pred cccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCH
Confidence 99999999999999999999999999999999999999999998888899999999889889999999999999999999
Q ss_pred HHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeeccCCCCC
Q 010193 419 AVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSH 498 (515)
Q Consensus 419 ~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~~~~~~~ 498 (515)
+++|.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||||+++++++.
T Consensus 410 ~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~ 489 (511)
T PLN02192 410 AVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAK 489 (511)
T ss_pred HHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred -CCCcccccccCCCCCC
Q 010193 499 -HSPWEDCIDNYPVKLI 514 (515)
Q Consensus 499 -~~~w~~~~~~~p~~~~ 514 (515)
.|||+||||+|||++|
T Consensus 490 ~~~~w~~~i~~yp~~~~ 506 (511)
T PLN02192 490 EKNPWMDEIHEFPVDVP 506 (511)
T ss_pred cCCCchhhHHhCCCCCC
Confidence 4999999999999976
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.3e-116 Score=940.01 Aligned_cols=497 Identities=87% Similarity=1.388 Sum_probs=474.9
Q ss_pred ccccccccCCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHhhhhhHHHHHHHHHHH
Q 010193 18 VGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILV 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (515)
-+++|++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|++.+|..++++++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (502)
T PLN02377 5 GEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLV 84 (502)
T ss_pred ceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999999999999999999999999998889999999999998899888888999988888889
Q ss_pred HHHHHHHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCc
Q 010193 98 FGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPS 177 (515)
Q Consensus 98 ~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~ 177 (515)
+++++|+|+||++|||+||+||+|++++++|.+.++|+....|.|++++++||+||++++||++++|+|+..++.|++.+
T Consensus 85 ~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~ 164 (502)
T PLN02377 85 FGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPS 164 (502)
T ss_pred HHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHH
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLA 257 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA 257 (515)
|+++++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA 244 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLA 244 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccce
Q 010193 258 KDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCV 337 (515)
Q Consensus 258 ~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~ 337 (515)
+++++++++++||||++|++|.+||.++++++++++++|||||||+||++++.++++++|++.++++++.++|++.|+|+
T Consensus 245 ~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i 324 (502)
T PLN02377 245 KDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCV 324 (502)
T ss_pred HHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCcccee
Confidence 99999999999999999999999988888899999999999999999999765555678999899999999999999999
Q ss_pred eeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCC
Q 010193 338 YQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGG 417 (515)
Q Consensus 338 ~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g 417 (515)
++++|+.|+.|+++++++|.++|++++.|++++||.++|++||+.++.....+++++..++++.|++++||||||+||+|
T Consensus 325 ~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqgg 404 (502)
T PLN02377 325 YQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGG 404 (502)
T ss_pred eeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCC
Confidence 99999889899999999999999999999999999999999999887777777888877777888999999999999999
Q ss_pred HHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeeccCCCC
Q 010193 418 RAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPS 497 (515)
Q Consensus 418 ~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~~~~~~ 497 (515)
++++++++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+++++++
T Consensus 405 r~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~ 484 (502)
T PLN02377 405 RAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPS 484 (502)
T ss_pred HHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCcccccccCCCCCC
Q 010193 498 HHSPWEDCIDNYPVKLI 514 (515)
Q Consensus 498 ~~~~w~~~~~~~p~~~~ 514 (515)
.+|||+||||+|||++.
T Consensus 485 ~~~~w~~~i~~yp~~~~ 501 (502)
T PLN02377 485 NNSPWEDCIDKYPVKLV 501 (502)
T ss_pred CCCCchhhHhhCCCccc
Confidence 78999999999999864
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.9e-109 Score=880.70 Aligned_cols=470 Identities=61% Similarity=1.065 Sum_probs=449.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeEecCCCC
Q 010193 45 HYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHN 124 (515)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~ 124 (515)
.|+++|+++++++|++++++.++.+++.+|++.+|..++.++++++.+++++++++++|+|+||++|||+||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998899999999999998899888888889988888888999999999999999999999999999
Q ss_pred ceecHHHHHHHhhhc---CCCChhh---HHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 010193 125 LKASYDKFMEHSKLT---GDFDESS---LEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFS 198 (515)
Q Consensus 125 ~~vs~~~~~e~~~~~---~~~~~~~---~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 198 (515)
+++|.+.++++.... |.|++++ ++||+||++||||++|||+|+..++.|+..+|+++++|+++++++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998665 7898888 9999999999999999999999988899999999999999999999999999
Q ss_pred hCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCc
Q 010193 199 NTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENIT 278 (515)
Q Consensus 199 ~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S 278 (515)
++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999998888999999999999999989999999999999999999999999999999999999999999
Q ss_pred CCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcccccchhHHHH
Q 010193 279 QNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAI 358 (515)
Q Consensus 279 ~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v 358 (515)
.+||.+++|+|++++++|||||||+||++++.++++++|++.++++++.++|++.|+|+++++|++|..|+.|+|++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99998888999999999999999999999775545679999999999999999999999999998898999999999999
Q ss_pred hhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCchhhhhh
Q 010193 359 AGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEAS 438 (515)
Q Consensus 359 ~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S 438 (515)
++++++.||+++||.++|++|+++|++++.++++++.+.+.|.|+++++|||||+||+|++++|.++++||++++++++|
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s 401 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEAS 401 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHH
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeeccCCCCCCCCcccccccCCCCCC
Q 010193 439 RMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLI 514 (515)
Q Consensus 439 ~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~~~~~~~~~~w~~~~~~~p~~~~ 514 (515)
+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++++++++.+|||+||||+|||+++
T Consensus 402 ~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~~yp~~~~ 477 (478)
T PLN02932 402 RMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWEDCLHKYPVEID 477 (478)
T ss_pred HHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCchhhHhhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999988778999999999999875
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.2e-99 Score=796.31 Aligned_cols=430 Identities=56% Similarity=0.991 Sum_probs=408.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCcee
Q 010193 84 FNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET 163 (515)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~ 163 (515)
+.+..+-+.++++++++++|+|+||++||++||+||+|++++++|.+.++++....|.|++++++||+||.++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 45555666666777778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEec
Q 010193 164 YFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLG 243 (515)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~ 243 (515)
|.|+..+..|+..+|+++++|+++.+++|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+||++
T Consensus 113 ~~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 113 YSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eeCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 99999999999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEE
Q 010193 244 GMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIV 323 (515)
Q Consensus 244 g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v 323 (515)
||||+|+++||++|+++++++++++||||++|.+|.++|+++||++++++++|||||||+||++++.++++++|+|.+++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999988899999999999999999999999998766666899999999
Q ss_pred EEEeccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccC
Q 010193 324 RTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPD 403 (515)
Q Consensus 324 ~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~ 403 (515)
+++.+.+++.|.|++|++|++|..|+.|+|++|.+++++++.|+++++|.++|++|+++|....+.+++++...++|+||
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 99998889899999999999999999999999999999999999999999999999999988888888888778889999
Q ss_pred cccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhh
Q 010193 404 FKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKC 483 (515)
Q Consensus 404 ~~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~ 483 (515)
++..++|||+|+||++|+|+++++|||+++++++||++|+|||||||+|+||+|++++++|++++||++||+|||+||+|
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~ 432 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchh
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeEeeccCCCCCC---CCcccccccCCCCC
Q 010193 484 NSAVWQALQNVKPSHH---SPWEDCIDNYPVKL 513 (515)
Q Consensus 484 ~sav~r~~~~~~~~~~---~~w~~~~~~~p~~~ 513 (515)
+++||||+++++++.+ |||+||||+|||++
T Consensus 433 es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 433 NSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred hHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999987543 99999999999975
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.9e-77 Score=593.62 Aligned_cols=290 Identities=68% Similarity=1.150 Sum_probs=284.4
Q ss_pred HHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHH
Q 010193 103 FIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAR 182 (515)
Q Consensus 103 ~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~ 182 (515)
|+|+||++|||+||+||+|++++++|.+++++++...+.|++++++||+||++++||+++||+|+..+..|++.+|++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+|++++++.|++++|+|+|++|+|||+||+|||.|+|+||+++||+|+|||++++.+|||+||||+|++++|++|++||+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccC
Q 010193 263 VNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQD 342 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed 342 (515)
.+|+++||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||++++|++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred CCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHH
Q 010193 343 DQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKL 392 (515)
Q Consensus 343 ~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v 392 (515)
++|..|++|+||+|.++|+++|.||+++||+|||++||++|.++++.||+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999998877653
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=9.8e-56 Score=449.22 Aligned_cols=321 Identities=20% Similarity=0.277 Sum_probs=263.9
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 188 (515)
.+++|.++|+|+|+ +.++|+++.+.... +++ ||.+++||++||++.+++. ..+|
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e~--------------~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDET--------------TSDL 55 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCcc--------------HHHH
Confidence 36899999999999 89999999866554 555 8999999999999988764 7899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~ 267 (515)
+++|+++||+++|++|+|||+||++| +|+++.|++|++||++||+. ++.+||++ .+|+|++.||++|..++++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999997 67899999999999999998 69999999 79999999999999999999999
Q ss_pred eEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCc
Q 010193 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKT 347 (515)
Q Consensus 268 ~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~ 347 (515)
+||||++|++|+ +.+++||. ++.+|||||+|+||++.+.+. ++..+++++|+..+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 67889997 688999999999999987331 46678889999998888766432111
Q ss_pred ccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHHH
Q 010193 348 GVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 427 (515)
Q Consensus 348 g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~ 427 (515)
.+. ......+...|+.| +++.+.++ .+.++..++. ....++|||||++||.|.++++.+++.
T Consensus 201 ----~~~------~~~~~~~~m~Gr~v------fk~av~~~-~~~~~~~L~~-~~l~~~dId~~vpHQan~ri~~~i~~~ 262 (323)
T COG0332 201 ----PKE------ESGGGLLVMDGREV------FKFAVRAM-PKAIEEVLEK-AGLTPEDIDWFVPHQANLRIIEAIAKK 262 (323)
T ss_pred ----ccc------cccccceeeccHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEccccccHHHHHHHHHH
Confidence 000 00011222223221 22222222 1122211111 111248999999999999999999999
Q ss_pred cCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEee
Q 010193 428 LQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQAL 491 (515)
Q Consensus 428 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~ 491 (515)
||++++|+ ..++++|||||++|+|+.|+.+.++|++|+||++++.+||+|++|+++++||.
T Consensus 263 l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 263 LGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred cCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 99999999 68999999999999999999999999999999999999999999999999983
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.7e-51 Score=433.07 Aligned_cols=347 Identities=17% Similarity=0.230 Sum_probs=270.4
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCC-ChhhHHH-HHHHHHHhCCCceeecCC-C---ccCC------C-CC
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDF-DESSLEF-QRKILERSGLGEETYFPE-A---MHAI------P-PK 175 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~-~~~~~~f-~~~i~~~sGI~~r~~~~~-~---~~~~------~-~~ 175 (515)
.+++|.++|++.|+ +.++++++.+.+.....- +....+. +++|++++||++|+..-+ + .+.. | ..
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 899999999987643210 1122332 577999999999997432 1 1110 1 13
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE-EEecCCcchHHHHHH
Q 010193 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-YNLGGMGCSAGVIAV 254 (515)
Q Consensus 176 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-~dl~g~gCsggl~al 254 (515)
.+++.+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 4677889999999999999999999999999999999876655699999999999999978866 4556 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCccCCCCc--cccccccccccccEEEEEecCCccc-ccccceeeeEEEEEe-ccC
Q 010193 255 DLAKDLLQVNWNTYAVVVSTENITQNWYFGNKK--SMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHK-GAD 330 (515)
Q Consensus 255 ~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr--~~lv~~~lfgDGAaA~LLs~~~~~~-~~~~~~L~~~v~t~~-~~d 330 (515)
++|++++++++.++||||++|.+|.++.+++|+ +.++++++|||||+|+||++.+... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 999999999999999999999999766555553 4567889999999999999865421 234577776544433 344
Q ss_pred cccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccC
Q 010193 331 DKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFD 409 (515)
Q Consensus 331 ~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 409 (515)
+.....+.. ++.++.+++++|..+.+.++..+ +++++. .+. ..|++
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~gl~------~~di~ 298 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFAPIGIN------DWNSI 298 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhhhcCCC------ccccc
Confidence 432222221 22456778888887654322211 223321 222 37899
Q ss_pred EEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEEChhHh
Q 010193 410 HFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIE----AKGRMCRG---HRVWQIAFGSGFK 482 (515)
Q Consensus 410 ~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~----~~g~i~~G---D~VlliafGsG~~ 482 (515)
+|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+|++
T Consensus 299 ~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 378 (393)
T PLN03172 299 FWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLT 378 (393)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcce
Confidence 9999999999999999999999999999999999999999999999999987 45788787 8999999999999
Q ss_pred hhheeeEee
Q 010193 483 CNSAVWQAL 491 (515)
Q Consensus 483 ~~sav~r~~ 491 (515)
++++++||.
T Consensus 379 ~~~~ll~~~ 387 (393)
T PLN03172 379 VETVVLHSV 387 (393)
T ss_pred eeeeeeEec
Confidence 999999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=2.5e-51 Score=428.61 Aligned_cols=344 Identities=39% Similarity=0.598 Sum_probs=264.8
Q ss_pred eEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceeecCC--CccC-------CCCCCcHH
Q 010193 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEETYFPE--AMHA-------IPPKPSMA 179 (515)
Q Consensus 111 v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~--~~~~-------~~~~~~~~ 179 (515)
++|.++++|+|+ ++++|+++.+.++.... +.+...++.++|++++||++|+++.+ ++.. .+.+.+.+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998764211 11334566689999999999999865 3321 12346678
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHH
Q 010193 180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 180 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~ 259 (515)
.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 88999999999999999999999999999999998878899999999999999987899999997899999999999999
Q ss_pred HHhcCCCCeEEEEEeccCcCCccCCCC-ccccccccccccccEEEEEecCCcccc--cccceeeeEEEEEeccCcccccc
Q 010193 260 LLQVNWNTYAVVVSTENITQNWYFGNK-KSMLIPNCLFRVGCSAVLLSNKRKDRR--QAKYRLVHIVRTHKGADDKAFRC 336 (515)
Q Consensus 260 lL~sg~~~~aLVVs~E~~S~~~~~~~d-r~~lv~~~lfgDGAaA~LLs~~~~~~~--~~~~~L~~~v~t~~~~d~~~~~~ 336 (515)
++++++.++||||++|..|. ++++.| +.+++++++|||||+|+||++++.... ...+++.+....... +. .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP-DS--EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee-cC--CCc
Confidence 99999999999999999998 667666 766667899999999999998764321 123443332211111 10 011
Q ss_pred eeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcc--cCcccccCEEEec
Q 010193 337 VYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYI--PDFKLAFDHFCIH 414 (515)
Q Consensus 337 ~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~--p~~~~did~~~~H 414 (515)
+....+ +....+.++++++.... .. ..+.++..++. . ....+|||||++|
T Consensus 236 ~~~~~~-~~~~~~~~~~~v~~~~~-------------------------~~-~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 236 MGWHLG-EEGLTFVLSRDVPRLVE-------------------------KN-LERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred eEEEEE-cceEEEEeChhHHHHHH-------------------------HH-HHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 110000 01111222222222111 11 11222222222 2 2235899999999
Q ss_pred cCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheee
Q 010193 415 AGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVW 488 (515)
Q Consensus 415 ~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~ 488 (515)
|+|+++++.+++.||++++++++|+.++++||||+|+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999998999999999999999999999999999999999999999999999999987
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.8e-50 Score=425.22 Aligned_cols=349 Identities=19% Similarity=0.249 Sum_probs=260.3
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceeecC-CCc---cC------CC-CC
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEETYFP-EAM---HA------IP-PK 175 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~-~~~---~~------~~-~~ 175 (515)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+.+++|++++||++|+..- ++. +. .| ..
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 46899999999999 89999999998765321 0122333367899999999998643 211 11 01 13
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCe-eEEEecCCcchHHHHHH
Q 010193 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI-RSYNLGGMGCSAGVIAV 254 (515)
Q Consensus 176 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsggl~al 254 (515)
.+++.+.+++.+|+.+|+++||+++|++|+|||+||++|++.+..|+++++|+++||+++++ +++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 45678899999999999999999999999999999999766567999999999999999766 488888 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCccCCCC--ccccccccccccccEEEEEecCCccc-ccccceeeeEEEEEec-cC
Q 010193 255 DLAKDLLQVNWNTYAVVVSTENITQNWYFGNK--KSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHKG-AD 330 (515)
Q Consensus 255 ~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~d--r~~lv~~~lfgDGAaA~LLs~~~~~~-~~~~~~L~~~v~t~~~-~d 330 (515)
++|++++++++.++||||++|.+|.++....+ .+.++++++|||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 99999999999999999999999986543222 34456889999999999999865321 1123443322222221 22
Q ss_pred cccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCE
Q 010193 331 DKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDH 410 (515)
Q Consensus 331 ~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~ 410 (515)
+. +.+.-++ .+..+.+++++|....+ ++. .++ ++.++. ......|+++
T Consensus 251 ~~----~~~~~~~-~g~~~~l~~~vp~~i~~----~~~-----------------~~l-~~~l~~-----~~~~~~d~~~ 298 (389)
T PLN03168 251 GA----IDGHLTE-AGLIFHLMKDVPGLISK----NIE-----------------KFL-NEARKC-----VGSPDWNEMF 298 (389)
T ss_pred Cc----cCceEec-CceEEEECHHHHHHHHH----HHH-----------------HHH-HHHHHh-----cCCCccccce
Confidence 21 1111111 12345556776665432 111 011 122211 1111257789
Q ss_pred EEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCC--------CEEEEEEEChhHh
Q 010193 411 FCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRG--------HRVWQIAFGSGFK 482 (515)
Q Consensus 411 ~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------D~VlliafGsG~~ 482 (515)
|++||+|+++++.+++.||+++|++..|+.++++||||||+|+++.|+++.++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999999999999999999999999999865 66655 8999999999999
Q ss_pred hhheeeEeecc
Q 010193 483 CNSAVWQALQN 493 (515)
Q Consensus 483 ~~sav~r~~~~ 493 (515)
|+++++||..+
T Consensus 378 ~~~~llr~~~~ 388 (389)
T PLN03168 378 LEVLVLRAAAN 388 (389)
T ss_pred hhhhhheeccc
Confidence 99999999654
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3.6e-50 Score=423.63 Aligned_cols=351 Identities=20% Similarity=0.264 Sum_probs=259.5
Q ss_pred HhCCCCeEEEEeeEecCCCCceecHHHHHHHhhh-cCCCChhh-HHHHHHHHHHhCCCceeecCCCc----c---CCCC-
Q 010193 105 MTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKL-TGDFDESS-LEFQRKILERSGLGEETYFPEAM----H---AIPP- 174 (515)
Q Consensus 105 ~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~-~~~~~~~~-~~f~~~i~~~sGI~~r~~~~~~~----~---~~~~- 174 (515)
.+.|.+++|.++|+++|+ +.++|+++.+.+.. ... ++++ .+.+++|++++||++|+++.+++ + ..+.
T Consensus 16 ~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 16 AANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKC-DDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred cCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcc-cCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 356788999999999999 89999999985443 211 2232 23357899999999999874211 0 0111
Q ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCe-eEEEecCCcchHH
Q 010193 175 ---KPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI-RSYNLGGMGCSAG 250 (515)
Q Consensus 175 ---~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsgg 250 (515)
..++..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ +++|++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 223445788999999999999999999999999999999888999999999999999998776 479999 799999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCC-C-ccccccccccccccEEEEEecCCccc-ccccceeeeEEEEEe
Q 010193 251 VIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGN-K-KSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHK 327 (515)
Q Consensus 251 l~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~-d-r~~lv~~~lfgDGAaA~LLs~~~~~~-~~~~~~L~~~v~t~~ 327 (515)
+.||++|.+++++++.++||||++|.+|.++.... + ....+++++|||||+|+||++++... ....+++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887553211 1 22334678999999999999865321 112233322111111
Q ss_pred ccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCccc
Q 010193 328 GADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKL 406 (515)
Q Consensus 328 ~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~ 406 (515)
. ++. +.+......+| ..+.+++++|+.+.+.++ ...+++++. .+. .+
T Consensus 252 p-~~~--~~~~~~~~~~g-~~~~~g~~v~~~~~~~~~----------------------~~i~~~L~~~gl~------~~ 299 (391)
T PLN03169 252 P-GTE--KTIDGRLTEEG-INFKLGRELPQKIEDNIE----------------------GFCKKLMKKAGLV------EK 299 (391)
T ss_pred C-CCc--cccCceecCCc-eEEEECcHHHHHHHHHHH----------------------HHHHHHHHHcCCC------CC
Confidence 1 110 01100111111 223445566554332111 111334432 222 25
Q ss_pred ccC--EEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCC---CCCEEEEEEEChhH
Q 010193 407 AFD--HFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMC---RGHRVWQIAFGSGF 481 (515)
Q Consensus 407 did--~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~---~GD~VlliafGsG~ 481 (515)
|+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+||
T Consensus 300 did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~ 379 (391)
T PLN03169 300 DYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGI 379 (391)
T ss_pred CCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccH
Confidence 687 9999999999999999999999999998899999999999999999999999888876 69999999999999
Q ss_pred hhhheeeEee
Q 010193 482 KCNSAVWQAL 491 (515)
Q Consensus 482 ~~~sav~r~~ 491 (515)
+|+++++|++
T Consensus 380 s~~~~ll~~~ 389 (391)
T PLN03169 380 TFEGILARNL 389 (391)
T ss_pred hHHHHHHhhh
Confidence 9999999985
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.8e-50 Score=423.60 Aligned_cols=348 Identities=18% Similarity=0.241 Sum_probs=266.5
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceeecCCCc----cC---C----CCC
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEETYFPEAM----HA---I----PPK 175 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~----~~---~----~~~ 175 (515)
.+++|.++|+..|+ +.++++++.+.+..... -.+...+.+++|++++||++|+..-+.+ +. . ...
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 46899999999999 89999999998765321 1222333367899999999998643211 11 1 113
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEE-EecCCcchHHHHHH
Q 010193 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY-NLGGMGCSAGVIAV 254 (515)
Q Consensus 176 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~-dl~g~gCsggl~al 254 (515)
.+++.+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++..+ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 45678899999999999999999999999999999999766555899999999999999777554 555 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCccCCCCc--cccccccccccccEEEEEecCCccc-ccccceeeeEEEEEe-ccC
Q 010193 255 DLAKDLLQVNWNTYAVVVSTENITQNWYFGNKK--SMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHK-GAD 330 (515)
Q Consensus 255 ~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr--~~lv~~~lfgDGAaA~LLs~~~~~~-~~~~~~L~~~v~t~~-~~d 330 (515)
++|++++++++.++||||++|.+|.++++++|+ +.++++++|||||+|+||++++... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999766655553 3556789999999999999754321 123566665443332 344
Q ss_pred cccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccC
Q 010193 331 DKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFD 409 (515)
Q Consensus 331 ~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 409 (515)
+.....+ . . ++.++.+++++|+.+.+.++.. .+++++. .+. ..|+|
T Consensus 252 ~~~~~~i-~---~-~G~~~~l~~~vp~~~~~~~~~~----------------------i~~~L~~~gl~------~~di~ 298 (391)
T PLN03173 252 GAIDGHL-R---E-VGLTFHLLKDVPGLISKNVEKS----------------------LTEAFKPLGIS------DWNSL 298 (391)
T ss_pred cceeeEE-E---c-CceEEEEecHHHHHHHHHHHHH----------------------HHHHHHhcCCC------ccccC
Confidence 3321111 1 1 2245667788887654322211 1334432 222 37999
Q ss_pred EEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHc----CCCCCC---CEEEEEEEChhHh
Q 010193 410 HFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMCRG---HRVWQIAFGSGFK 482 (515)
Q Consensus 410 ~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~----g~i~~G---D~VlliafGsG~~ 482 (515)
+|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+
T Consensus 299 ~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t 378 (391)
T PLN03173 299 FWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLT 378 (391)
T ss_pred eEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHH
Confidence 999999999999999999999999999999999999999999999999999853 444443 8899999999999
Q ss_pred hhheeeEeec
Q 010193 483 CNSAVWQALQ 492 (515)
Q Consensus 483 ~~sav~r~~~ 492 (515)
+++++++|..
T Consensus 379 ~e~~ll~~~~ 388 (391)
T PLN03173 379 VETVVLHSVA 388 (391)
T ss_pred HHHHHHhhcc
Confidence 9999999854
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=8.3e-49 Score=414.07 Aligned_cols=350 Identities=18% Similarity=0.242 Sum_probs=259.4
Q ss_pred CCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChh---hHHHHHHHHHHhCCCceeecCCCc----c------CC-C
Q 010193 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDES---SLEFQRKILERSGLGEETYFPEAM----H------AI-P 173 (515)
Q Consensus 108 ~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~---~~~f~~~i~~~sGI~~r~~~~~~~----~------~~-~ 173 (515)
+.+++|+++|+|+|+ ++++|+++.+.+..... +++ ..+.+++|++++||++|+++.+++ . .. +
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 356999999999999 89999999987532110 111 122357899999999999986542 0 01 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCee-EEEecCCcchHHHH
Q 010193 174 PKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR-SYNLGGMGCSAGVI 252 (515)
Q Consensus 174 ~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~g~gCsggl~ 252 (515)
...+++.+.+.+.+|+.+|++++|+++|++|+|||+||++|++....|+++.+|+++||+++++. .+++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 23456778899999999999999999999999999999997654458999999999999986653 56666 69999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCcc---ccccccccccccEEEEEecCCcccccccceeeeEEEEEecc
Q 010193 253 AVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKS---MLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGA 329 (515)
Q Consensus 253 al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~---~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~ 329 (515)
||++|.+|+++++.++||||++|.+|.. +++.|++ .++++++|||||+|+||+++++...+..+++...... .
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~---~ 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA---I 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE---E
Confidence 9999999999999999999999999984 4444443 3455789999999999998664322234555543322 2
Q ss_pred CcccccceeeccCCCCCcccccc-hhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCc----ccCc
Q 010193 330 DDKAFRCVYQEQDDQGKTGVSLS-KELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPY----IPDF 404 (515)
Q Consensus 330 d~~~~~~~~~~ed~~g~~g~~ls-~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~----~p~~ 404 (515)
+++.++.+.+..+. ++.-..++ +.+|....+.++ ++++..+.+. ...-
T Consensus 252 ~p~~~~~~~~~~~~-~g~~~~~~~~~vp~~i~~~l~--------------------------~~l~~~l~~~~~~~~g~~ 304 (399)
T PLN03171 252 IPESDDAINMHFTE-GGLDGNIGTRQVPGLIGDNIE--------------------------RCLLDAFAPLLGGDGGAE 304 (399)
T ss_pred ecCCchheEEEEEc-CCceEEECchhHHHHHHHHHH--------------------------HHHHHHHHhhcccccCCC
Confidence 33333334332111 21212333 555554433221 1222111100 0001
Q ss_pred ccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCC--CCCC---CEEEEEEECh
Q 010193 405 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGR--MCRG---HRVWQIAFGS 479 (515)
Q Consensus 405 ~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~--i~~G---D~VlliafGs 479 (515)
.+|++|+ +||+|+++++.+++.||++++|+..|++++++||||+|+|+|+.|+++.++++ +++| |++++++||+
T Consensus 305 ~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~ 383 (399)
T PLN03171 305 WNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGP 383 (399)
T ss_pred cccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcc
Confidence 3678765 69999999999999999999999988899999999999999999999988764 6888 9999999999
Q ss_pred hHhhhheeeEeecc
Q 010193 480 GFKCNSAVWQALQN 493 (515)
Q Consensus 480 G~~~~sav~r~~~~ 493 (515)
|++|++++|++.+.
T Consensus 384 Glt~~~~ll~~~~~ 397 (399)
T PLN03171 384 GLTVDAMLLHASGH 397 (399)
T ss_pred cHHHHHHHhhcccC
Confidence 99999999998763
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=5.2e-49 Score=415.47 Aligned_cols=349 Identities=17% Similarity=0.235 Sum_probs=264.4
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCC-C-hhhHHHHHHHHHHhCCCceeecCCCc----cCC------C-CC
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDF-D-ESSLEFQRKILERSGLGEETYFPEAM----HAI------P-PK 175 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~-~-~~~~~f~~~i~~~sGI~~r~~~~~~~----~~~------~-~~ 175 (515)
.+.+|.++|+..|+ +.++++++.+.+.....- + ++..+.+++|++++||++|+..-+++ +.. | ..
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999987753211 1 22233367899999999999744211 110 1 13
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCe-eEEEecCCcchHHHHHH
Q 010193 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI-RSYNLGGMGCSAGVIAV 254 (515)
Q Consensus 176 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsggl~al 254 (515)
.+++.+.+++.+|+.+|+++||+++|++++|||+||++|+++...|+++++|+++||+++++ +++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 45678899999999999999999999999999999998766656999999999999999766 478999 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCccCCCC--ccccccccccccccEEEEEecCCccc-ccccceeeeEEEEEeccCc
Q 010193 255 DLAKDLLQVNWNTYAVVVSTENITQNWYFGNK--KSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHKGADD 331 (515)
Q Consensus 255 ~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~d--r~~lv~~~lfgDGAaA~LLs~~~~~~-~~~~~~L~~~v~t~~~~d~ 331 (515)
++|++++++++.++||||++|.+|.++.++++ .+.++++++|||||+|+||++++... .++.|++....... ..+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~-~p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTI-LPDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceE-ecCC
Confidence 99999999999999999999999986644432 23456788999999999999865421 11234554321111 1111
Q ss_pred ccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCE
Q 010193 332 KAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDH 410 (515)
Q Consensus 332 ~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~ 410 (515)
+.+ +.+.-.+ .+..+.+++++|..+.+.+... .+++++. .+. ..|+++
T Consensus 255 ~~~--~~~~i~~-~G~~~~l~~~vp~~~~~~i~~~----------------------v~~~L~~~gl~------~~di~~ 303 (401)
T PLN03170 255 EGA--IDGHLRE-VGLTFHLLKDVPGLISKNIERS----------------------LEEAFKPLGIT------DYNSIF 303 (401)
T ss_pred ccc--ccceEEc-CCeEEEEehHHHHHHHHHHHHH----------------------HHHHHHhcCCC------ccccCe
Confidence 111 1111011 1234556778776654322111 1234432 222 378999
Q ss_pred EEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEEChhHhh
Q 010193 411 FCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIE----AKGRMCRG---HRVWQIAFGSGFKC 483 (515)
Q Consensus 411 ~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~----~~g~i~~G---D~VlliafGsG~~~ 483 (515)
|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+||+|
T Consensus 304 ~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 383 (401)
T PLN03170 304 WVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTV 383 (401)
T ss_pred EEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhH
Confidence 999999999999999999999999999999999999999999999999997 46888888 89999999999999
Q ss_pred hheeeEeec
Q 010193 484 NSAVWQALQ 492 (515)
Q Consensus 484 ~sav~r~~~ 492 (515)
+++++||..
T Consensus 384 ~~~ll~~~~ 392 (401)
T PLN03170 384 ETVVLHSVP 392 (401)
T ss_pred HhHHheecc
Confidence 999999954
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=7.2e-48 Score=396.81 Aligned_cols=322 Identities=15% Similarity=0.224 Sum_probs=247.1
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
+++|+++|+|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++. +.+|+
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e~--------------~~~la 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDET--------------LSDLA 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCCC--------------HHHHH
Confidence 6899999999999 89999999987652 333 6889999999999877653 78999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999986 56889999999999999997 689999995 9999999999999999987 489
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
||||++|..+. +.+..++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.++..
T Consensus 134 aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~--- 199 (326)
T PRK05963 134 VLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSA--- 199 (326)
T ss_pred EEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999886 44555554 568999999999999866421 22 333445667777776555432110
Q ss_pred cccchhHHHHhhhccccccc-ccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHHH
Q 010193 349 VSLSKELMAIAGGALKTNIT-TLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 427 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~-~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~ 427 (515)
.+.+.+.. .+ ...+. ..|+.+ +.++...+ .+.++..++. ...-.+|||+|++||+|+++++.+.+.
T Consensus 200 ~~~~~~~~---~~--~~~~~~~~~~~~------~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~~ 266 (326)
T PRK05963 200 RPFAPERD---AS--EFLMTMQDGRAV------FTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCET 266 (326)
T ss_pred CCCccccc---cc--ccceEecCCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHHH
Confidence 01110000 00 00010 011111 11111111 1122222221 111248999999999999999999999
Q ss_pred cCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 428 LQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 428 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
||++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 267 l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 267 IGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred cCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999999 6899999999999999999999999999999999999999999999999986
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-48 Score=378.86 Aligned_cols=346 Identities=25% Similarity=0.307 Sum_probs=280.3
Q ss_pred eEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHH-HhCCCceeecCCCccCCCC---CCcHHHHHHHHH
Q 010193 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILE-RSGLGEETYFPEAMHAIPP---KPSMAAAREEAE 186 (515)
Q Consensus 111 v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~-~sGI~~r~~~~~~~~~~~~---~~~~~~~~~ea~ 186 (515)
.+|.++++++|+ +++++.|+...+..... .+ +.+-+.+.+. ..+|.+|+...|.+++..+ ...++-+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~-~~-~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF-QE-GREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc-cc-chHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 89999888877665332 22 2444455666 5678888877666665333 234567899999
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWN 266 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~ 266 (515)
+++++|.++||+++++.|+|||+|+++|+++..+||+.++|+++||+++++..+.+.||||+|+..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCcCCccCCCC-ccccccccccccccEEEEEecCCcc--cccccceeeeEEEEEeccCcccccceeeccCC
Q 010193 267 TYAVVVSTENITQNWYFGNK-KSMLIPNCLFRVGCSAVLLSNKRKD--RRQAKYRLVHIVRTHKGADDKAFRCVYQEQDD 343 (515)
Q Consensus 267 ~~aLVVs~E~~S~~~~~~~d-r~~lv~~~lfgDGAaA~LLs~~~~~--~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~ 343 (515)
.+|||||.|.||.++...++ ++.++...+||||+||++++.+... ....+..+.+..++ ...|+ -+.|-+.-.+
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-L~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-LYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccc-cCCcc--ccccceeecC
Confidence 99999999999997765554 3488999999999999999986542 11123333333222 22222 2334444444
Q ss_pred CCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHH
Q 010193 344 QGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDE 423 (515)
Q Consensus 344 ~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~ 423 (515)
+| ..+.+|+|+|......++.|+++ ++ -...+ ..+||++|+.|+||++++++
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~~-----------------fL----~~~~l------s~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVTT-----------------FL----ATHGL------SIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHHH-----------------HH----HHcCC------chhhhceeeeCCCCchHHHH
Confidence 33 45788999999888777777653 11 11122 24899999999999999999
Q ss_pred HHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeec
Q 010193 424 LEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQ 492 (515)
Q Consensus 424 v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~ 492 (515)
+++.||+++++++.||+.|.+|||+||+++++.|.+.++++ .++|.+.++.+||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 799999999999999999999999975
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.2e-47 Score=394.83 Aligned_cols=331 Identities=16% Similarity=0.195 Sum_probs=245.5
Q ss_pred CCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHH
Q 010193 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (515)
Q Consensus 107 r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~ 186 (515)
|-++++|++++.|+|+ ++++|+++.+.... ++. ...+++.+++||.+|+++.+++. +.
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~--~~~~~i~~~~Gi~~R~~~~~~e~--------------~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDI--KTLKRMKKVIGLNTRYICDENTC--------------VS 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cch--hhhhhhhhccCceEEEeCCCCCC--------------HH
Confidence 3467999999999999 89999976543221 121 12357889999999999876543 79
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCC
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNW 265 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~ 265 (515)
+|+.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999996 56999999999999999998889999998 699999999999999999998
Q ss_pred CCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCC
Q 010193 266 NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQG 345 (515)
Q Consensus 266 ~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g 345 (515)
.+ ||||++|.+|. +.++.|+. ...+|||||+|+||+++++.. . . ....++++.++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~---~~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMN---LAPIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCC---ceeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999998 45556654 467999999999999755321 1 1 234577777777776643211
Q ss_pred Ccccccch-h-HHHHhhhcccccccccCCcccchhhhHHHHHHHH---HHHHHhhhccCcccCcccccCEEEeccCCHHH
Q 010193 346 KTGVSLSK-E-LMAIAGGALKTNITTLGPVVLPVSEQLLFFATLV---IKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAV 420 (515)
Q Consensus 346 ~~g~~ls~-d-l~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~---~~~v~~~~~~~~~p~~~~did~~~~H~~g~~v 420 (515)
..+..... + .+......-...+...|+.+ +.+..... .+++++.. ..-.+|||+|++||+|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~~~~i~~~L~~~-----gl~~~did~~v~HQ~~~~i 274 (353)
T PRK12880 206 IPKADIFNDDSLMQTEEFRQLENLYMDGANI------FNMALECEPKSFKEILEFS-----KVDEKDIAFHLFHQSNAYL 274 (353)
T ss_pred CCccccccccccccccccccCceEEEcCHHH------HHHHHHHHHHHHHHHHHHc-----CCCHHHCCEEEECCCCHHH
Confidence 11111100 0 00000000000111122221 11222211 13333321 1124899999999999999
Q ss_pred HHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeec
Q 010193 421 IDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQ 492 (515)
Q Consensus 421 l~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~ 492 (515)
++.+++.||++++|+. ..++++||||||+|+|+.|+++.++|+++ +++++||+|++|+++++||-+
T Consensus 275 ~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 275 VDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 9999999999999983 35689999999999999999999887764 999999999999999999943
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=5.1e-47 Score=398.67 Aligned_cols=332 Identities=17% Similarity=0.224 Sum_probs=245.3
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 188 (515)
.+++|+++|+|+|+ ++++|+++.+.++. +++ +|.+++||++|+++.+++. +.+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~~--------------~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDET--------------LTSL 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCCC--------------HHHH
Confidence 36899999999999 89999999987652 333 6899999999999876553 7899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
+.+|+++||+++|++|+|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999999754333456789999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
||||++|.+|. +.+++|+. +..+|||||+|+||++++... .+ +..+...+++..++.+.....+....+
T Consensus 178 vLVv~~e~~s~-~~~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~~---i~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRG---TCILFGDGAGAVVLQACDDDE----DG---LLGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccC---ceEEEcceeEEEEEEEcCCCC----Cc---eEEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 55566665 356999999999999865431 12 223345566665554433211100000
Q ss_pred -cccchhHHHH-hhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHH
Q 010193 349 -VSLSKELMAI-AGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEK 426 (515)
Q Consensus 349 -~~ls~dl~~v-~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~ 426 (515)
..-..+.... ....-..++...|+.+ +.+....+ .++++..++. ...-.+|||||++||+|+++++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~-~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~ 318 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKEV------FKFAVRCV-PQVIESALQK-AGLTAESIDWLLLHQANQRIIDAVAQ 318 (379)
T ss_pred cccccccccccccccccccceEecCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 0000000000 0000001233333221 11111111 1222222221 11124899999999999999999999
Q ss_pred HcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 427 NLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 427 ~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
.||++++++ ..++++||||+|+|+|+.|++++++|++++||+|++++||+||+|++++|+|
T Consensus 319 ~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 319 RLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999999 5789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-45 Score=380.73 Aligned_cols=325 Identities=13% Similarity=0.172 Sum_probs=240.6
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 188 (515)
+.++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|+++. ++. +.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~~--------------~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GET--------------SSYM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CCC--------------HHHH
Confidence 45899999999999 89999999887653 333 688899999999987 432 6899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCC-CeeEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRG-NIRSYNLGGMGCSAGVIAVDLAKDLLQVNWN 266 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~-~~~~~dl~g~gCsggl~al~lA~~lL~sg~~ 266 (515)
+.+|++++|+++|++|+|||+||+++ ++++..|+.+.+|+++||+++ ++.++|++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999986 566778999999999999985 47999999 6999999999999999999999
Q ss_pred CeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCC
Q 010193 267 TYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGK 346 (515)
Q Consensus 267 ~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~ 346 (515)
++||||++|.+|. .++..++. +..+|||||+|+||++.+.. .++. .++..++++.++....+...
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~--- 199 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNE---SCILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGG--- 199 (329)
T ss_pred CEEEEEEeccccC-CCCcccCc---ceEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCC---
Confidence 9999999999886 33444443 45799999999999986542 2333 33334444433322221100
Q ss_pred cccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHH
Q 010193 347 TGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEK 426 (515)
Q Consensus 347 ~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~ 426 (515)
....-+.+.. .....+ .+...|+.+ +.+.... ..++++..++. ...-.+|||+|++||+|+.+++.+++
T Consensus 200 ~~~~~~~~~~-~~~~~~--~~~~~~~~~------~~~~~~~-~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~ 268 (329)
T PRK07204 200 TMIHPREYSE-ERKEDF--LFDMNGRAI------FKLSSKY-LMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRK 268 (329)
T ss_pred cCCCCccccc-ccccCc--eEEECCHHH------HHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 0000000000 000000 000011111 0011111 12223222222 12224899999999999999999999
Q ss_pred HcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 427 NLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 427 ~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
.|+++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++++
T Consensus 269 ~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 269 KLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999998 6899999999999999999999999999999999999999999999999985
No 20
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=1.1e-45 Score=380.90 Aligned_cols=321 Identities=16% Similarity=0.248 Sum_probs=241.3
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
.++|.++|.|+|+ ++|+|+|+.+.++. +++ +|.+++||++|+++.+++. +.+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSSTS--------------LTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCCC--------------HHHHH
Confidence 5899999999999 89999999988652 222 6889999999998876642 68999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|++++|+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ +||++++.||++|.++|+++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 35578899999998 78899999 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCC--
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGK-- 346 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~-- 346 (515)
+|||++|.+|. +++++++. +..+|||||+|+||++.+.. .+. .....+|++.++...........
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~---~~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SIL---GFKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------CeE---EEEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 45556654 56899999999999976542 122 23345666555543322110000
Q ss_pred cccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHH
Q 010193 347 TGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEK 426 (515)
Q Consensus 347 ~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~ 426 (515)
.+... .+. .. ...+...|+.+ +.+..... .++++..++. ...-.+|||||++||+|+++++.+++
T Consensus 200 ~~~~~---~~~---~~-~~~~~~~g~~~------~~~~~~~~-~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~ 264 (326)
T CHL00203 200 FGTTK---LPQ---GQ-YQSISMNGKEV------YKFAVFQV-PAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIAN 264 (326)
T ss_pred ccccc---ccc---CC-cceEEECCHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000 000 00 01122222211 11111111 1122222222 11124899999999999999999999
Q ss_pred HcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 427 NLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 427 ~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
.||++++++ ..++++||||+|+|+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 265 ~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 265 RLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 999999999 6799999999999999999999999999999999999999999999999998
No 21
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.9e-45 Score=376.81 Aligned_cols=317 Identities=15% Similarity=0.254 Sum_probs=246.3
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 188 (515)
.+++|.++|+|+|+ ++++++|+.+..+. +++ ++.+++||++|++.++++. +.+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~--------------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY--------------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC--------------HHHH
Confidence 46899999999999 89999999987552 333 5888999999999877653 7899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~ 267 (515)
+.+|++++|+++|++|+|||.||+++ ++++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999986 45788899999999999997 68999999 69999999999999999999999
Q ss_pred eEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCc
Q 010193 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKT 347 (515)
Q Consensus 268 ~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~ 347 (515)
+||||++|.+|. +.+..++. ..++|||||+|+||++++.. .+ +..+...++++.++.++.+..+
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~---- 198 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRT---TCILFGDGAGAVVLEATENE-----PG---FIDYVLGTDGDGGDILYRTGLG---- 198 (325)
T ss_pred EEEEEEehhhcC-cCCccccC---ceEEEeecceEEEEEecCCC-----CC---eEEEEEEEcCCCCCeEEEcCCC----
Confidence 999999999887 34444554 45799999999999987642 12 2334456676666655543211
Q ss_pred ccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHH---HHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHH
Q 010193 348 GVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATL---VIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDE 423 (515)
Q Consensus 348 g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~ 423 (515)
.....+ ... -..++...|. +.+.+.... ..+++++. .+. ++|||+|++||+|+++++.
T Consensus 199 -~~~~~~-~~~----~~~~~~~~~~------~~~~~~~~~~~~~i~~~L~~~g~~------~~did~~~~h~~~~~~~~~ 260 (325)
T PRK12879 199 -TTMDRD-ALS----GDGYIVQNGR------EVFKWAVRTMPKGARQVLEKAGLT------KDDIDWVIPHQANLRIIES 260 (325)
T ss_pred -CCCCcc-ccc----cCccEEEcCH------HHHHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHH
Confidence 000000 000 0001111111 001111111 11333332 222 4899999999999999999
Q ss_pred HHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 424 LEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 424 v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
+++.||++++++ ..++++|||++|+|+|+.|++++++|++++||++++++||+|++++++++||
T Consensus 261 ~~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 261 LCEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HHHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 999999999999 4689999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.3e-45 Score=377.79 Aligned_cols=318 Identities=16% Similarity=0.212 Sum_probs=240.7
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcC---CCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG---DFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEA 185 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~---~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea 185 (515)
.+++|.+++.|+|+ ++++|+++.+.+.... ..++ +++.+++||++|++.++++. .
T Consensus 4 ~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~~--------------~ 61 (338)
T PRK09258 4 SNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGTQ--------------L 61 (338)
T ss_pred cceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCCC--------------H
Confidence 57999999999999 8999999998754311 1122 25778899999999765442 6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
.+|+.+|+++||+++|++++|||.||++| ++++..|+++.+|+++||+++++.++|+++ ||+|++.||++|.++++++
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~g 140 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIELG 140 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999987 468889999999999999987799999994 9999999999999999999
Q ss_pred CCCeEEEEEeccCcCCccCCC------Ccc------ccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcc
Q 010193 265 WNTYAVVVSTENITQNWYFGN------KKS------MLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDK 332 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~~~~~~~------dr~------~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~ 332 (515)
+.++||||++|..+. ++++. +.. ..+...+|||||+|+||++++... ..+++.. ....++++
T Consensus 141 ~~~~~Lvv~~e~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~~ 214 (338)
T PRK09258 141 QIDYALVVSGESARE-IVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAATE 214 (338)
T ss_pred CCCEEEEEEecccch-hccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCCC
Confidence 999999999999886 33211 111 112357899999999999865321 1234433 22234444
Q ss_pred cccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEE
Q 010193 333 AFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHF 411 (515)
Q Consensus 333 ~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~ 411 (515)
.++.+... ...+..+.+.+.... ...... ..+++++. .++ .+|||+|
T Consensus 215 ~~~~~~~~-------~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~L~~~g~~------~~did~~ 262 (338)
T PRK09258 215 HHELCQGG-------RDGMRTDAVGLLKEG------------------VELAVD-TWEAFLAQLGWA------VEQVDRV 262 (338)
T ss_pred cccccccC-------ccceEEcHHHHHHHH------------------HHHHHH-HHHHHHHHcCCC------HHHCCEE
Confidence 33321110 011111222111100 000001 11233322 222 3799999
Q ss_pred EeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 412 CIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 412 ~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
++||+|+++++.+++.||++++|+ ..++.+||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 263 i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 263 ICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999999999 6788999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=4.4e-44 Score=370.73 Aligned_cols=331 Identities=18% Similarity=0.156 Sum_probs=243.5
Q ss_pred CCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHH
Q 010193 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQ 187 (515)
Q Consensus 108 ~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 187 (515)
|++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~--------------~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH--------------TSD 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC--------------HHH
Confidence 568999999999999 89999999887653 333 5778899999999876553 789
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeec--CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc-C
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVNCS--LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV-N 264 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~~s--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s-g 264 (515)
|+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999998743 4778999999999999997 78999999 6999999999999999999 6
Q ss_pred CCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCC
Q 010193 265 WNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQ 344 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~ 344 (515)
..+++|||++|..+. ..+..++..- ....|||||+|+||++++.. .++ +.+...+|++.++.+..+.++
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g- 202 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGG- 202 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCee-eeccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCC-
Confidence 678999999999876 3333333310 01247999999999986542 333 344556777777665544321
Q ss_pred CCcccccchhHHHHhhhcccccccccCCcccchhhhHH-HHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHH
Q 010193 345 GKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLL-FFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDE 423 (515)
Q Consensus 345 g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~-~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~ 423 (515)
...+.+.+.... +. ..+...++..+ ...+. ..... ..++++..++. ...-.+|||+|++||+|+++++.
T Consensus 203 --~~~~~~~~~~~~-~~---~~~~~~~~~~~--~~~~~~~~~~~-~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~~~~ 272 (339)
T PRK06840 203 --TKQPASPETVEN-RQ---HYLDVIDPESM--KERLDEVSIPN-FLKVIREALRK-SGYTPKDIDYLAILHMKRSAHIA 272 (339)
T ss_pred --cCCCCccccccc-cc---ceEEEcCcHHH--HHHhHhhHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCcCHHHHHH
Confidence 111111111000 00 00111111100 00000 00000 01222222221 11124899999999999999999
Q ss_pred HHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEee
Q 010193 424 LEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQAL 491 (515)
Q Consensus 424 v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~ 491 (515)
+++.||++++++ . ++.+||||+|+|++++|++++++|++++||++++++||+|++|+++++||-
T Consensus 273 ~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 273 LLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999998 3 689999999999999999999999999999999999999999999999983
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=3.4e-44 Score=367.36 Aligned_cols=319 Identities=19% Similarity=0.279 Sum_probs=245.1
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
+++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. +.+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~~--------------~~~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGET--------------TSDLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCCC--------------HHHHH
Confidence 4799999999999 89999999988742 332 6788999999999887643 78999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5667899999999999997 79999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
+|||++|.++. +.+.+++. ...+|||||+|+||++.+.. .++. .+...++++.++.+.++..+..
T Consensus 133 vLvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSR-ILDWTDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999887 33334443 46899999999999987642 3333 3455667777776665532111
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHHHc
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNL 428 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~L 428 (515)
.+. +... .-...+...++.+. ..+... .+++++..++. ...-.+|||+|++||+|+++++.+++.|
T Consensus 198 ~~~--~~~~----~~~~~~~~~~~~~~------~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 198 SPF--EDAE----GGDPYLVMDGREVF------KFAVRL-MPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred Ccc--cccc----ccCccEEEcChHHH------HHHHHh-hHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 000 0000 00001111111110 001110 11222222221 1112489999999999999999999999
Q ss_pred CCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheee
Q 010193 429 QLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVW 488 (515)
Q Consensus 429 gl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~ 488 (515)
|++++++ ..++++|||++|+|++++|++++++|++++||+++++++|+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999999 57999999999999999999999999999999999999999999999874
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=6.5e-44 Score=365.88 Aligned_cols=315 Identities=21% Similarity=0.325 Sum_probs=246.2
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
.++|.++++|+|+ ++++++++.+..+. +++ ++.+++|+++|++..+++. +.+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDET--------------SSTMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCCC--------------HHHHH
Confidence 4899999999999 89999999887653 332 5788999999999876653 78999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|++++|+++|++|+|||.+|+++ ++++..|+.+.++++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 46778899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
+|||++|..+. +.++.++. ...+|||||+|+||++++... + +.++...++++.++.++.+.++....
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~---~~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~- 200 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRG---TCVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTS- 200 (318)
T ss_pred EEEEEehhhcC-cCCcCCCC---eEEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCC-
Confidence 99999999876 44445554 356899999999999876431 2 34455566777777666554321100
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHHHHH
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 427 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~ 427 (515)
.+ . ..+...++.+. .+....... ..++.++. .++ .+||+||++||+++++++.+++.
T Consensus 201 ---~~-------~---~~~~~~~~~~~--~~~~~~~~~-~~~~~l~~~g~~------~~di~~~~~h~~~~~~~~~~~~~ 258 (318)
T TIGR00747 201 ---GP-------S---PFITMEGNEVF--KHAVRKMGD-VVEETLEANGLD------PEDIDWFVPHQANLRIIEALAKR 258 (318)
T ss_pred ---CC-------C---CceEECCHHHH--HHHHHHHHH-HHHHHHHHcCCC------HHHCCEEEECCCCHHHHHHHHHH
Confidence 00 0 00011111100 000000011 11233332 222 38999999999999999999999
Q ss_pred cCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEe
Q 010193 428 LQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 428 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~ 490 (515)
||++++|+ ..++++||||+|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 259 lgi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 259 LELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred cCCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999 4789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.8e-42 Score=353.73 Aligned_cols=317 Identities=20% Similarity=0.273 Sum_probs=243.8
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 188 (515)
..|+|.++++|+|+ ++++++++.+..+. +++ +|.+++||++|+++.+++. ..+|
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~--------------~~~l 55 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDET--------------TSDL 55 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCCC--------------HHHH
Confidence 36899999999999 89999999987653 332 6788999999998766543 7899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~ 267 (515)
+.+|++++|+++|++++|||.+|++++ ++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.+++++|+.+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999864 5666899999999999995 78999999 69999999999999999999999
Q ss_pred eEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCc
Q 010193 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKT 347 (515)
Q Consensus 268 ~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~ 347 (515)
+|||+++|.++. +++..++. ...+|||||+|+||++++.. ++ ..++..++++.++.++.+.++...
T Consensus 134 ~vLvv~~e~~s~-~~~~~~~~---~~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~- 199 (319)
T PRK09352 134 NVLVIGAEKLSR-IVDWTDRS---TCVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG- 199 (319)
T ss_pred EEEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC-
Confidence 999999999886 44444544 35799999999999987642 12 234445666666555444321100
Q ss_pred ccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHHHHHHHH
Q 010193 348 GVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 427 (515)
Q Consensus 348 g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~ 427 (515)
..+ ...+...|.. .+.++...+ .++++..++. ...-.+|||||++|++|+++++.+++.
T Consensus 200 --~~~-----------~~~~~~~~~~------~~~~~~~~~-~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~ 258 (319)
T PRK09352 200 --PAS-----------PGYLRMEGRE------VFKFAVREL-AKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAKK 258 (319)
T ss_pred --CCC-----------CCceEECCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 000 0011111110 001111111 1222222221 111148999999999999999999999
Q ss_pred cCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEee
Q 010193 428 LQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQAL 491 (515)
Q Consensus 428 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~ 491 (515)
||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 259 lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 259 LGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred hCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 99999998 57899999999999999999999999999999999999999999999999973
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-42 Score=358.38 Aligned_cols=310 Identities=17% Similarity=0.210 Sum_probs=234.3
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
.++|.+++.|+|+ ++++|+++.+..+. +++ |+.+++||.+|+++++++. +.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~~--------------~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDED--------------TATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCcC--------------HHHHH
Confidence 5899999999999 89999999988753 444 7899999999999877653 78999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|+++||+++|++|+|||.||++| ++++..|+.+.+|+++||+++++.++|++ +||++++.||++|.+++++|+.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 46778899999999999998678999998 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
||||++|.... +..++. ...|||||+|+||++.+. ..++.+... ..+|+ .+.+..+.......+
T Consensus 135 aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~--~d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDT--PDFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeecccc--ccccc--hhhcCCCCCcCCCcC
Confidence 99999998422 223332 246899999999997432 233333211 11221 111111000000000
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHHHHH
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 427 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~ 427 (515)
..++++ + .-+.... ...+++++. .+. .+|||+|++||+|+++++.+++.
T Consensus 199 ~~~~~~-~----------------------~~~~~~~-~~i~~~L~~~gl~------~~dId~~v~Hq~n~~~~~~~~~~ 248 (347)
T PRK04262 199 GRFTGE-P----------------------AYFKHII-SAAKGLMEKLGLK------PSDYDYAVFHQPNGKFPLRVAKM 248 (347)
T ss_pred ceecch-H----------------------HHHHHHH-HHHHHHHHHhCcC------HHHhceeecCCCchHHHHHHHHH
Confidence 000000 0 0000011 111334432 222 48999999999999999999999
Q ss_pred cCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeeccCC
Q 010193 428 LQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVK 495 (515)
Q Consensus 428 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~~~~ 495 (515)
||++++|+..+. ++++||||+|||+|++|+++++ ++++||+|++++||+|+++.+++||+.+.+.
T Consensus 249 Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 249 LGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred cCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999996443 6899999999999999999987 4899999999999999999999999987665
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1e-41 Score=358.29 Aligned_cols=345 Identities=19% Similarity=0.239 Sum_probs=238.4
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
+++|.++|+|+|+ ++|+|+++.+.++......+ ...+||++++||++|+++.++.. .+.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RPTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CCCC-------CHHHHH
Confidence 5899999999999 89999999988764321111 12258999999999998754321 0111 268999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999987 46688899999999999998 58899998 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCC------------cc--c----cccccccccccEEEEEecCCcccccccceeeeEEEEEeccC
Q 010193 269 AVVVSTENITQNWYFGNK------------KS--M----LIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGAD 330 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~d------------r~--~----lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d 330 (515)
||||++|.+|..+ ++++ +. . -..+.+|||||+|+||++.+... +..+ ++...+..++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998732 2111 10 0 00135799999999999865421 1111 1111122233
Q ss_pred cccccceeeccCC---CC-Cccccc-chhHHHHhhh-cccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccC
Q 010193 331 DKAFRCVYQEQDD---QG-KTGVSL-SKELMAIAGG-ALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPD 403 (515)
Q Consensus 331 ~~~~~~~~~~ed~---~g-~~g~~l-s~dl~~v~g~-~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~ 403 (515)
...+..++..... .+ ..+|.. +.+-+...+. .++.+ ++.+ .+.....+....+++++. .++
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~i~~~L~~~gl~----- 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQD----VRLL---NENIVVYTIKPLLELVDKRNLD----- 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhH----HHHH---HHHhHHHHHHHHHHHHHHcCCC-----
Confidence 2222222211000 00 001110 1110100000 00000 0000 000000001111233322 222
Q ss_pred cccccCEEEeccCCHHHHHHHHHHc-----CCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEC
Q 010193 404 FKLAFDHFCIHAGGRAVIDELEKNL-----QLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFG 478 (515)
Q Consensus 404 ~~~did~~~~H~~g~~vl~~v~~~L-----gl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafG 478 (515)
.+|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++||+|++++.|
T Consensus 289 -~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~ 364 (378)
T PRK06816 289 -PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPE 364 (378)
T ss_pred -hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEec
Confidence 489999999999999999999987 8999999 6899999999999999999999999999999999999887
Q ss_pred hh-HhhhheeeEee
Q 010193 479 SG-FKCNSAVWQAL 491 (515)
Q Consensus 479 sG-~~~~sav~r~~ 491 (515)
+| +.++.+++.|+
T Consensus 365 s~~~~~~~~~~~~~ 378 (378)
T PRK06816 365 SGRFSTAFMLLTVV 378 (378)
T ss_pred ccchhheeEEEEEC
Confidence 66 99999999874
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=2.9e-41 Score=350.77 Aligned_cols=315 Identities=16% Similarity=0.192 Sum_probs=235.7
Q ss_pred eEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHHH
Q 010193 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMY 190 (515)
Q Consensus 111 v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 190 (515)
++|.++|+|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++. +.+|+.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~~--------------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDED--------------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCCC--------------HHHHHH
Confidence 679999999999 89999999887653 444 6888999999999887653 789999
Q ss_pred HHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeE
Q 010193 191 GALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYA 269 (515)
Q Consensus 191 ~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~a 269 (515)
+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||+++++.++|++ .||+|++.||++|.+++++|..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999986 46777899999999999997789999999 5999999999999999999999999
Q ss_pred EEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCc-ccccceeeccCCCCCcc
Q 010193 270 VVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADD-KAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 270 LVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~-~~~~~~~~~ed~~g~~g 348 (515)
|||++|..+.. ..++. ...|||||+|+||++.+.. .++.+.. ...+|+ +.++. . + ..
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~----~---~-~~ 192 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRR----E---G-EP 192 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceeccccccccc----C---C-Cc
Confidence 99999997642 23332 3568999999999965421 1222211 111221 11110 0 0 00
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHHHHH
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 427 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~ 427 (515)
+ +...+. ..+ ..+-+.++... .+++++. .+. .+|||+|++||+|.++++.+.+.
T Consensus 193 ~------~~~~~~-------~~~-----~~~~~~~~~~~-~~~~L~~~gl~------~~did~~i~Hq~~~~~~~~~~~~ 247 (345)
T TIGR00748 193 Y------PRHGGR-------FTG-----EPAYFHHVVTA-AKGLMEKLGLT------PEDFDYAVFHQPNGKFYLVAARM 247 (345)
T ss_pred C------CCcCCe-------ecC-----hHHHHHHHHHH-HHHHHHHcCCC------HHHcCEEEeCCCChHHHHHHHHH
Confidence 0 000000 000 00011112211 2344432 222 38999999999999999999999
Q ss_pred cCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeeccCCCCCCCCccc
Q 010193 428 LQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWED 504 (515)
Q Consensus 428 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~~~~~~~~~~w~~ 504 (515)
||++++++..+ ...++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+..... .||.-
T Consensus 248 lgl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~--~~~~~ 319 (345)
T TIGR00748 248 LGFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK--RDLAP 319 (345)
T ss_pred cCCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH--hhhhh
Confidence 99999999421 13489999999999999999986 689999999999999999999999998766532 46853
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.5e-40 Score=346.00 Aligned_cols=346 Identities=14% Similarity=0.176 Sum_probs=235.1
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhc-CCCChhh---H----------HHHHHHHHHhCCCceeecCCCc----cC
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLT-GDFDESS---L----------EFQRKILERSGLGEETYFPEAM----HA 171 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~-~~~~~~~---~----------~f~~~i~~~sGI~~r~~~~~~~----~~ 171 (515)
+++|+++|+|+|+ ++++|+++.+.++.. .+|+++. + ...++|.+++||++|+++.+.. ..
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 5899999999999 899999999875321 1121100 0 0135789999999999975321 00
Q ss_pred CCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcch
Q 010193 172 IPP--KPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCS 248 (515)
Q Consensus 172 ~~~--~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCs 248 (515)
.++ ..+.......+.+|+.+|+++||+++|++++|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 011 01111112346789999999999999999999999999875 5778999999999999996 5789998 6999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEec
Q 010193 249 AGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKG 328 (515)
Q Consensus 249 ggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~ 328 (515)
+++.||.+|.++|++|..++||||++|.++. +.+..|+. +..+|||||+|+||++.+....+.++++.+.. ..
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTR---LF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEE---ee
Confidence 9999999999999999999999999999886 33445665 46899999999999986543222345554432 22
Q ss_pred cCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCccccc
Q 010193 329 ADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAF 408 (515)
Q Consensus 329 ~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~di 408 (515)
++ ..+.+..+. | .+.....+-+.... .++...|..+ +.++.... .+.++..++. ...-.+||
T Consensus 230 ~~--~~~~~~~~~---G-~~~~~~~~~~~~~~----~~~~~~g~~~------~~~~~~~~-~~~i~~~L~~-~gl~~~dI 291 (372)
T PRK07515 230 TQ--FSNNIRNNF---G-FLNRADPEGIGARD----KLFVQEGRKV------FKEVCPMV-AEHIVEHLAE-NGLTPADV 291 (372)
T ss_pred cc--cccceecCC---C-CCCCCCcccccccc----ceEEeccHHH------HHHHHHHH-HHHHHHHHHH-cCCCHHHC
Confidence 21 111111110 1 00000000000000 0111112211 11111111 1222222221 11124899
Q ss_pred CEEEeccCCHHHHHHHHHH-cCCC--chhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhh
Q 010193 409 DHFCIHAGGRAVIDELEKN-LQLL--PVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNS 485 (515)
Q Consensus 409 d~~~~H~~g~~vl~~v~~~-Lgl~--~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~s 485 (515)
|+|++||+|+++++.+.+. ||++ +++. +.++++||||+|+|+++.|+++. +++++||+|++++||+|++|++
T Consensus 292 d~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~ 366 (372)
T PRK07515 292 KRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGS 366 (372)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHH
Confidence 9999999999999999988 5654 4554 68999999999999999999984 5689999999999999999999
Q ss_pred eeeEe
Q 010193 486 AVWQA 490 (515)
Q Consensus 486 av~r~ 490 (515)
+++|.
T Consensus 367 ~ll~~ 371 (372)
T PRK07515 367 VIVRK 371 (372)
T ss_pred HHhcc
Confidence 99873
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=3.3e-39 Score=331.03 Aligned_cols=320 Identities=22% Similarity=0.291 Sum_probs=235.5
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
+++|.++++|+|+ ++++++++.+..+. + ++.+++||++|++..+++. ..+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~~--------------~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDED--------------VPTMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCCC--------------HHHHH
Confidence 4789999999999 89999999887653 1 4667799999999765432 68999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.+++++|..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5566889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
+|||++|.++.... ...+ ..++|||||+|+||++.+.. ..+++. .++..+++..+++.+ +.-+ + +
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~~~-~~~~-~--~ 195 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFSPY-PVMD-G--G 195 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccCcc-ceec-c--C
Confidence 99999999887432 1111 46899999999999987642 123333 334445554432100 0000 0 0
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccC-cccCcccccCEEEeccCCH-HHHHHHHH
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKP-YIPDFKLAFDHFCIHAGGR-AVIDELEK 426 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~-~~p~~~~did~~~~H~~g~-~vl~~v~~ 426 (515)
..-... ......+..+..+ ..+ ....... ..++++..++. .+. +||++|++||+|+ .+++.+++
T Consensus 196 ~~~~~~--~~~~~~~~~~~~~--~~~------~~~~~~~-~~~~~~~~l~~~~~~---~~i~~~~~h~~~~~~~~~~~~~ 261 (324)
T cd00827 196 YPKPCK--LAYAIRLTAEPAG--RAV------FEAAHKL-IAKVVRKALDRAGLS---EDIDYFVPHQPNGKKILEAVAK 261 (324)
T ss_pred CCcchh--hhhhcceeecCCc--cch------HHHHhHH-HHHHHHHHHHHcccc---cccceeeccCchHHHHHHHHHH
Confidence 000000 0000001000000 000 0011111 12233333322 111 6899999999999 99999999
Q ss_pred HcCCCchhhhhhcc-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheee
Q 010193 427 NLQLLPVHVEASRM-TLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVW 488 (515)
Q Consensus 427 ~Lgl~~e~~~~S~~-~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~ 488 (515)
.|+++++++..++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 262 ~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 262 KLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 99999999986654 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=1.1e-35 Score=312.68 Aligned_cols=307 Identities=16% Similarity=0.161 Sum_probs=221.0
Q ss_pred eEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHHH
Q 010193 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMY 190 (515)
Q Consensus 111 v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 190 (515)
|+|.+++.|+|+ ++++++++.+..+. +++ |+.+..|++++++.++++. +.+|+.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~ed--------------~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDED--------------IVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCCC--------------HHHHHH
Confidence 579999999999 99999999987653 554 6788899999998877652 689999
Q ss_pred HHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeE
Q 010193 191 GALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYA 269 (515)
Q Consensus 191 ~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~a 269 (515)
+|++++|+++ +|++||.||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 56777899999999999998889999999 5999999999999999999999999
Q ss_pred EEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEE-EEEeccCcccccceeeccCCCCCcc
Q 010193 270 VVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIV-RTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 270 LVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v-~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
|||++|+... .. .+ . ...+|||||+|+||++.+. +..+. .+...+++. ++. +.+...
T Consensus 132 LVv~~D~a~~--~~-~~-~---~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ES-P---GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CC-C---CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCC-----
Confidence 9999998432 11 11 1 2468999999999997542 11110 011112211 111 111100
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhhccCcccCcccccCEEEeccCCHHHH----HHH
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVI----DEL 424 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~p~~~~did~~~~H~~g~~vl----~~v 424 (515)
+.+.+.+ +. + ...|+..+ .++++..++. .+.-.+|||+||+||++.++. +.+
T Consensus 190 -----~~~~v~g-----------~~----s--~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDG-----------QY----S--NEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECc-----------HH----H--HHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 0011111 10 0 01122211 2222222211 122248999999999977773 345
Q ss_pred HHHcCCCc-hhh----hhhccccccccccccchHHHHHHHHHHcC-CCCCCCEEEEEEEChhHhhhheeeEeec
Q 010193 425 EKNLQLLP-VHV----EASRMTLHRFGNTSSSSIWYELAYIEAKG-RMCRGHRVWQIAFGSGFKCNSAVWQALQ 492 (515)
Q Consensus 425 ~~~Lgl~~-e~~----~~S~~~l~r~GNtsSaSi~~~La~~~~~g-~i~~GD~VlliafGsG~~~~sav~r~~~ 492 (515)
.+.++++. +++ ++|+.+.+++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+...
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 66677773 333 35667899999999999999999999885 7999999999999999877776666543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=8.3e-34 Score=302.04 Aligned_cols=312 Identities=17% Similarity=0.241 Sum_probs=220.9
Q ss_pred CCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeec--CCCccCCCCCCcHHHHHHH
Q 010193 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYF--PEAMHAIPPKPSMAAAREE 184 (515)
Q Consensus 107 r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~--~~~~~~~~~~~~~~~~~~e 184 (515)
+|++++|.++|.|+|+ ++|+++++.++.+. +++ |+ ++||++|+++ ++++ +
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E--------------d 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE--------------D 52 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC--------------C
Confidence 4788999999999999 89999999988763 555 44 5899999974 4444 3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHH---HHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIV---NKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~---~~LGl~~~~~~~dl~g~gCsggl~al~lA~~l 260 (515)
+.+|+++|++++|+++|++|++||+||++| ++++..|+.++.|+ ++||.+ ++.+||++ .+|+||+.||++|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 789999999999999999999999999997 56788999999886 678876 89999999 5999999999999999
Q ss_pred HhcCC--CCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcc-cccce
Q 010193 261 LQVNW--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDK-AFRCV 337 (515)
Q Consensus 261 L~sg~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~-~~~~~ 337 (515)
++++. .++||||++|+.+... .+ . ...+||||+|+||+..+. ..+..... ++... .|+ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~-~~-~------e~t~GdGA~A~lv~~~~~------~~l~~~~~---g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAE-GP-A------RPTGGAGAVAMLVGPNAP------IVFESKYR---GSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccC-CC-C------CCCCCcceEEEEEccCCC------ceeecccc---cccCcccch-h
Confidence 99986 5999999999966421 11 1 235699999999986442 11111111 11111 121 1
Q ss_pred eeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHH---HHHHHhhhccC-cccCcccccCEEEe
Q 010193 338 YQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLV---IKKLFNRNVKP-YIPDFKLAFDHFCI 413 (515)
Q Consensus 338 ~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~---~~~v~~~~~~~-~~p~~~~did~~~~ 413 (515)
+.+... .+.|. ..|+.+ +.+|+..+ .+++.++.-+. -.....+|||++|+
T Consensus 193 ~rP~~~---------~~~~~-----------vdG~~s------~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~~vf 246 (459)
T PLN02577 193 YKPDLA---------SEYPV-----------VDGKLS------QTCYLMALDSCYKRFCEKYEKLEGKQFSISDADYFVF 246 (459)
T ss_pred cccCCC---------CCceE-----------EcchHH------HHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCEEEe
Confidence 112110 00011 112211 11233222 12222211000 00123589999999
Q ss_pred ccCCHHHHHHHHHHcCCC----------------------------------------------chhhhhhccccccccc
Q 010193 414 HAGGRAVIDELEKNLQLL----------------------------------------------PVHVEASRMTLHRFGN 447 (515)
Q Consensus 414 H~~g~~vl~~v~~~Lgl~----------------------------------------------~e~~~~S~~~l~r~GN 447 (515)
||+..++..+..+.|.+. .+|++||...-++.||
T Consensus 247 HqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN 326 (459)
T PLN02577 247 HAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGN 326 (459)
T ss_pred cCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCc
Confidence 999888877755554311 2677888777888999
Q ss_pred cccchHHHHHHHHHHcCC-CCCCCEEEEEEEChhHhhhheeeEeec
Q 010193 448 TSSSSIWYELAYIEAKGR-MCRGHRVWQIAFGSGFKCNSAVWQALQ 492 (515)
Q Consensus 448 tsSaSi~~~La~~~~~g~-i~~GD~VlliafGsG~~~~sav~r~~~ 492 (515)
++++|++..|..+++... ..+|+||.++++|||........++..
T Consensus 327 ~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 327 MYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred ccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 999999999999987643 459999999999999877777776664
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=6.8e-32 Score=275.97 Aligned_cols=309 Identities=18% Similarity=0.245 Sum_probs=238.4
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 189 (515)
.++|++++.|.|. +++..+++.+..+. +++ ++..-.|++++.+.+.+| ++..|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E--------------D~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE--------------DAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch--------------hHHHHH
Confidence 5899999999999 99999999987663 454 788889999999987764 689999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~ 268 (515)
++|++++|++.++||++|+.|+++| |..+...+.+..|++.||+.+++.++|+.+ +|-+++.||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 667888899999999999999999999994 99999999999999999999999
Q ss_pred EEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcc
Q 010193 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348 (515)
Q Consensus 269 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g 348 (515)
+|||++|+. + |...+.. ....|+||+|+|++..+... ..+.... +++..-.++|+--.++
T Consensus 135 ~LvI~sD~a-~--~~~~~~~----E~t~GAGavA~lIg~n~~~~----a~~~~~~-syt~d~~DFwRp~~~~-------- 194 (377)
T COG3425 135 GLVIGADTA-Q--YAPGDAL----EYTAGAGAVAFLIGKNPPIV----AEFEGTG-SYTTDTPDFWRPDGQP-------- 194 (377)
T ss_pred eEEEeehhh-c--cCCCccc----CccCCCceEEEEEccCCCeE----EEecCce-EEecCCCcccccCCCc--------
Confidence 999999983 3 2222222 35789999999999753221 1111111 1111112234322221
Q ss_pred cccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHH---HHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHH
Q 010193 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLV---IKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDEL 424 (515)
Q Consensus 349 ~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~---~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v 424 (515)
.|.+.|+ +|++ .|++.+ .++.+++ .++ .+|||++|+|+++.++-...
T Consensus 195 ------yp~~dg~---------------~s~~--~Y~~~~~~a~~~~~~k~gls------~~dfdy~vfH~P~~k~~~ka 245 (377)
T COG3425 195 ------YPYVDGR---------------FSEP--AYFKHVENAAKGYMEKTGLS------PDDFDYIVFHQPNGKFPKKA 245 (377)
T ss_pred ------ccccCce---------------ecHH--HHHHHHHHHHHHHHHHhCCC------hhhhCeEEecCCCCchHHHH
Confidence 1222221 1111 122221 1233322 222 38999999999999999999
Q ss_pred HHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEeeccCC
Q 010193 425 EKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVK 495 (515)
Q Consensus 425 ~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~~~~~ 495 (515)
++.++.+.+++.++....++.||++|+|+++.|+.++++.+ .+||||++.+||+|......-.+....+.
T Consensus 246 ~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 246 AKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred HHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 99999999999999888889999999999999999998766 79999999999999777766666666654
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1e-31 Score=285.72 Aligned_cols=311 Identities=16% Similarity=0.227 Sum_probs=216.0
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCcee--ecCCCccCCCCCCcHHHHHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET--YFPEAMHAIPPKPSMAAAREEAEQ 187 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~--~~~~~~~~~~~~~~~~~~~~ea~~ 187 (515)
+|+|.+++.|+|+ ++|+++++.++.+. +++ |+ ++||++|+ +.++++ ++.+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~E--------------d~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRE--------------DINS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCC--------------CHHH
Confidence 5899999999999 89999999887653 444 44 59999998 455544 3799
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHc---CCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKY---RLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
|+.+|++++|++++++|++||+||++| ++++..|+.+++|++.| |.+ ++.+||+. .+|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999997 67899999999999955 454 89999999 5999999999999999998
Q ss_pred CC--CCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeecc
Q 010193 264 NW--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQ 341 (515)
Q Consensus 264 g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~e 341 (515)
+. .++||||++|+. . | .+.+ ...++||||+|+||+..+.- .++. ++..++.....++|+-.+..
T Consensus 131 ~~~~~~~aLVV~sDia-~--y--~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~rP~~~~- 196 (454)
T TIGR01833 131 SSWDGRYALVVAGDIA-V--Y--AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYKPDLAS- 196 (454)
T ss_pred CCcCCCeEEEEEeccc-c--c--cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEeecccccCCCCCC-
Confidence 85 599999999992 2 2 2222 23578999999999976531 0111 01112222233344321110
Q ss_pred CCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHH------HHHHhhhccCc---ccCcccccCEEE
Q 010193 342 DDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVI------KKLFNRNVKPY---IPDFKLAFDHFC 412 (515)
Q Consensus 342 d~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~------~~v~~~~~~~~---~p~~~~did~~~ 412 (515)
+.|.+.|+ +|-+ .|+..+. ++....+++.. .....+|||++|
T Consensus 197 ------------~~p~vdg~---------------~S~~--~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~~dfd~~~ 247 (454)
T TIGR01833 197 ------------EYPVVDGK---------------LSIQ--CYLSALDRCYKSYCKKIEKQWGKSGGDRKFTLNDFDYMV 247 (454)
T ss_pred ------------cccccCCc---------------cCHH--HHHHHHHHHHHHHHHHHHHhhhhhccccCCCHhHcCEEe
Confidence 11222211 0000 0111000 11111111110 011248999999
Q ss_pred eccCCHHHHHHH-HHHc---------------------------------------------CCCchhhhhhcccccccc
Q 010193 413 IHAGGRAVIDEL-EKNL---------------------------------------------QLLPVHVEASRMTLHRFG 446 (515)
Q Consensus 413 ~H~~g~~vl~~v-~~~L---------------------------------------------gl~~e~~~~S~~~l~r~G 446 (515)
+|++..++..+. ++.+ +...+|++||...-.+.|
T Consensus 248 fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 327 (454)
T TIGR01833 248 FHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVG 327 (454)
T ss_pred ccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcC
Confidence 999987777654 3222 111267888866677899
Q ss_pred ccccchHHHHHHHHHHcCC--CCCCCEEEEEEEChhHhhhheeeEeecc
Q 010193 447 NTSSSSIWYELAYIEAKGR--MCRGHRVWQIAFGSGFKCNSAVWQALQN 493 (515)
Q Consensus 447 NtsSaSi~~~La~~~~~g~--i~~GD~VlliafGsG~~~~sav~r~~~~ 493 (515)
|+.++|+++.|..+++..+ ...|+||.|.+||||........+....
T Consensus 328 N~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 328 NMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred chhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 9999999999999997543 4579999999999998777777766653
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.98 E-value=5.8e-32 Score=262.29 Aligned_cols=203 Identities=24% Similarity=0.314 Sum_probs=162.6
Q ss_pred HhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCCh--hhHHHHHHHHHHhCCCceeecCCCccC-------CCCC
Q 010193 105 MTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDE--SSLEFQRKILERSGLGEETYFPEAMHA-------IPPK 175 (515)
Q Consensus 105 ~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~--~~~~f~~~i~~~sGI~~r~~~~~~~~~-------~~~~ 175 (515)
.+.+.+.+|+++|+..|+ ++++++++.+.+......+. +..+++++|++++||++|+..-+.++. ....
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456778999999999999 99999999987533222232 445778899999999999975432210 1111
Q ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHH
Q 010193 176 ----PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGV 251 (515)
Q Consensus 176 ----~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl 251 (515)
.+++.+.+++.+|+.+|++++|+++|++++|||+||++|+++...|++..+|+++|||++++..+.+++|||.||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 3567789999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCC--CccccccccccccccEEEEEecCC
Q 010193 252 IAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGN--KKSMLIPNCLFRVGCSAVLLSNKR 309 (515)
Q Consensus 252 ~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~--dr~~lv~~~lfgDGAaA~LLs~~~ 309 (515)
.||.+|+++.+++|..+||||++|.+|.+|..++ +.+.++.++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998776433 366888999999999999999764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=8.2e-28 Score=237.76 Aligned_cols=237 Identities=18% Similarity=0.177 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.+++++. .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 6889999999999999999999999999975 5666899999999999997 79999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCC
Q 010193 264 NWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDD 343 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~ 343 (515)
+..+++||+++|. ++|||||+|+||++.+....+....+..+.......++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC--------
Confidence 9999999999998 579999999999986532211110011111111111111000
Q ss_pred CCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhhh-ccCcccCcccccCEEEeccCCHHHHH
Q 010193 344 QGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRN-VKPYIPDFKLAFDHFCIHAGGRAVID 422 (515)
Q Consensus 344 ~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~-~~~~~p~~~~did~~~~H~~g~~vl~ 422 (515)
.....+ ......++.++.. +. .+|+|+|++|+.+..+++
T Consensus 140 -----~~~~~~-----------------------------~~~~~i~~~l~~ag~~------~~did~~~~h~~~~~~~~ 179 (254)
T cd00327 140 -----PAVSGE-----------------------------GLARAARKALEGAGLT------PSDIDYVEAHGTGTPIGD 179 (254)
T ss_pred -----CCCChH-----------------------------HHHHHHHHHHHHcCCC------HHHCCEEEccCCcCcccc
Confidence 000000 0001123344322 22 389999999999999999
Q ss_pred HHHHHcCCCchhhh--hhccccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEEEEChhHhhhheee
Q 010193 423 ELEKNLQLLPVHVE--ASRMTLHRFGNTSSSSIWYELAYIEAKGRMC-------RGHRVWQIAFGSGFKCNSAVW 488 (515)
Q Consensus 423 ~v~~~Lgl~~e~~~--~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~-------~GD~VlliafGsG~~~~sav~ 488 (515)
.+++.+++++++.. +...+..+|||++++|.++.|..+.+..+.+ +||+++++++|.|++++++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 180 AVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 99999999887774 3457889999999999999999998876665 899999999999999998875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=6.9e-25 Score=225.44 Aligned_cols=251 Identities=16% Similarity=0.154 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHhCCCC----cCCcCEEEEeecC-CCC---------------------CCChHHHHHHHcCCCCCee
Q 010193 185 AEQVMYGALDNLFSNTNVN----PKDIGILVVNCSL-FNP---------------------TPSLSAMIVNKYRLRGNIR 238 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~----p~dID~LI~~~s~-~~~---------------------~Ps~a~~I~~~LGl~~~~~ 238 (515)
..+|+.+|++++|+++|++ +++||.||++++. .+. .|+.+.+|++.||++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 4689999999999999999 9999999998753 332 788899999999994 78
Q ss_pred EEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCC----------C--Cc--cccccccccccccEEEE
Q 010193 239 SYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFG----------N--KK--SMLIPNCLFRVGCSAVL 304 (515)
Q Consensus 239 ~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~----------~--dr--~~lv~~~lfgDGAaA~L 304 (515)
+++++ +||++++.||++|.++|++++.+++||+++|..+..+... + .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 89999 6999999999999999999999999999999876532110 0 00 11224689999999999
Q ss_pred EecCCccccc---ccceeeeEEEEEeccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhH
Q 010193 305 LSNKRKDRRQ---AKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQL 381 (515)
Q Consensus 305 Ls~~~~~~~~---~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~ 381 (515)
|++.+....+ ...++.+ +....++..... +. |..+.
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~~------------~~-------------------------~~~~~- 206 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMGA------------FA-------------------------PSAEG- 206 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCCC------------CC-------------------------cCHHH-
Confidence 9976542111 1112222 111122111000 00 00000
Q ss_pred HHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCchhh--hhhccccccccccccchHHHHHH
Q 010193 382 LFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHV--EASRMTLHRFGNTSSSSIWYELA 458 (515)
Q Consensus 382 ~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~--~~S~~~l~r~GNtsSaSi~~~La 458 (515)
... ..+++++. .+. .+|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||++++|.++.|.
T Consensus 207 --~~~-~i~~al~~agl~------~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~ 277 (332)
T cd00825 207 --LAR-AAKEALAVAGLT------VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVD 277 (332)
T ss_pred --HHH-HHHHHHHHcCCC------HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHH
Confidence 001 12344432 222 3899999999999999999999888776642 12257889999999999999999
Q ss_pred HHHHcCCCC-------------------------CCCEEEEEEEChhHhhhheee
Q 010193 459 YIEAKGRMC-------------------------RGHRVWQIAFGSGFKCNSAVW 488 (515)
Q Consensus 459 ~~~~~g~i~-------------------------~GD~VlliafGsG~~~~sav~ 488 (515)
.+.+..+.+ +||+++++++|.|.+++++|+
T Consensus 278 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 278 EAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 998765555 889999999999999998874
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.81 E-value=2.3e-19 Score=166.71 Aligned_cols=167 Identities=21% Similarity=0.267 Sum_probs=127.6
Q ss_pred CCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHH
Q 010193 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (515)
Q Consensus 107 r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~ 186 (515)
||++|+|.+++.|.|+ +.++.+++.++.+. ++. |+....|.++..+.++.| ++.
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E--------------D~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE--------------DIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS---------------HH
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc--------------cHH
Confidence 7999999999999999 99999999887663 554 554445555556766654 589
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCC--CCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRL--RGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
.|+..|++++|++.+++|++|+.|+++| |......+.+.+|++.||+ ..+++.+|+. ++|.||..||+.|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 5566788899999999999 4578999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecC
Q 010193 264 NW--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNK 308 (515)
Q Consensus 264 g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~ 308 (515)
++ .+++|||++|+- + |.... +...-|-||+|+|++..
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~-----~e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGS-----AEPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-----TGGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEecccc-c--cCCCC-----ccccccceeEEEEecCC
Confidence 74 689999999993 3 32221 23567999999999974
No 40
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.79 E-value=1.4e-19 Score=152.16 Aligned_cols=83 Identities=34% Similarity=0.519 Sum_probs=75.1
Q ss_pred ccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhh
Q 010193 405 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCN 484 (515)
Q Consensus 405 ~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~ 484 (515)
.+|||+|++||.|+++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 3899999999999999999999999999999 6899999999999999999999999999999999999999999999
Q ss_pred heeeEe
Q 010193 485 SAVWQA 490 (515)
Q Consensus 485 sav~r~ 490 (515)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 41
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.78 E-value=6.1e-19 Score=162.15 Aligned_cols=118 Identities=25% Similarity=0.452 Sum_probs=89.7
Q ss_pred CcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHh-hhccCcccCcccccCEEEeccCCHHHHHHH
Q 010193 346 KTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFN-RNVKPYIPDFKLAFDHFCIHAGGRAVIDEL 424 (515)
Q Consensus 346 ~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~-~~~~~~~p~~~~did~~~~H~~g~~vl~~v 424 (515)
++.+.|++++|.++++.++.. -+++++ ..++ + .|+.+|++|+||++|++.+
T Consensus 25 Gf~~~Ls~~vP~~i~~~i~~~----------------------~~~~L~~~g~~----~--~~~~~wavHPGG~~ILd~v 76 (151)
T PF02797_consen 25 GFHFILSKEVPDLISDNIPPF----------------------VEDLLARHGLS----D--WDILFWAVHPGGRKILDAV 76 (151)
T ss_dssp EEEEEE-TTHHHHHHHHHHHH----------------------HHHHHHGGTCC----S--GGGSEEEEE-SSHHHHHHH
T ss_pred eEEEEEhhHhHHHHHHHHHHH----------------------HHHHHhhhccc----c--cccceeeecCChHHHHHHH
Confidence 367899999998876532211 122332 2222 1 3566899999999999999
Q ss_pred HHHcCCCchhhhhhccccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEEEChhHhhhheeeEee
Q 010193 425 EKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEA----KGRMCR---GHRVWQIAFGSGFKCNSAVWQAL 491 (515)
Q Consensus 425 ~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~----~g~i~~---GD~VlliafGsG~~~~sav~r~~ 491 (515)
++.|+|+++++.+||.+|++|||+||+++++.|+++.+ +|.... +++++++|||+|++..++++|.+
T Consensus 77 ~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 77 EEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 99999999999999999999999999999999999987 344333 48999999999999999999976
No 42
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.72 E-value=3.4e-16 Score=158.14 Aligned_cols=318 Identities=20% Similarity=0.279 Sum_probs=215.6
Q ss_pred CCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHH
Q 010193 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (515)
Q Consensus 107 r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~ 186 (515)
+|.+|.|.++.+|.|. ..|+++++..+-+. +.. |. ..|+++....-.+ -||+..
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------Ky--tIGLGq~~Mgfcs------------drEDi~ 61 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------KY--TIGLGQTQMGFCS------------DREDII 61 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------ce--EeccCcceecccC------------chhhhh
Confidence 5779999999999999 78999998765442 211 11 3577766542211 135678
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcC--CCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYR--LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LG--l~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
.++..++.+++++-+|+++.|+-|-|.|. .-.-..|.-..++..++ =..++..+|..+ +|.||..||--|.+|+++
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiES 140 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIES 140 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhh
Confidence 88999999999999999999999999984 34556788888888887 445799999995 999999999999999998
Q ss_pred CC--CCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeee-EEEEEeccCcccccceeec
Q 010193 264 NW--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVH-IVRTHKGADDKAFRCVYQE 340 (515)
Q Consensus 264 g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~-~v~t~~~~d~~~~~~~~~~ 340 (515)
.. +++||||++|+-- +-.|+-| +.-|-||.|+|+++...- .+.. +..+|... .|+. |-+
T Consensus 141 ssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi------~ferglr~thM~h---ayDF-yKP 202 (462)
T KOG1393|consen 141 SSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPI------IFERGLRATHMQH---AYDF-YKP 202 (462)
T ss_pred cccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCce------Eecccchhhhhhh---hhhc-cCC
Confidence 75 7999999999832 2223433 467999999999976532 1111 22233221 2221 111
Q ss_pred cCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHH-------HHHHHHhhhccCcccCcccccCEEEe
Q 010193 341 QDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATL-------VIKKLFNRNVKPYIPDFKLAFDHFCI 413 (515)
Q Consensus 341 ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~-------~~~~v~~~~~~~~~p~~~~did~~~~ 413 (515)
.+..+.|.|.|.- |-| .|++- ..+++-+...+. -++-.++||++++
T Consensus 203 ---------dl~SEyPvVDGkl---------------Si~--cYl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~if 255 (462)
T KOG1393|consen 203 ---------DLLSEYPVVDGKL---------------SIQ--CYLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIF 255 (462)
T ss_pred ---------CCCCcCceecCee---------------hHH--HHHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEEE
Confidence 1233445444421 111 11111 112222222111 1222468999999
Q ss_pred ccCCHHHHHH-HH-----------------------------------------HHcCCCchhhhhhccccccccccccc
Q 010193 414 HAGGRAVIDE-LE-----------------------------------------KNLQLLPVHVEASRMTLHRFGNTSSS 451 (515)
Q Consensus 414 H~~g~~vl~~-v~-----------------------------------------~~Lgl~~e~~~~S~~~l~r~GNtsSa 451 (515)
|.+--++.++ ++ -...+-.+|+.+|.-.-.+.||+.++
T Consensus 256 HsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTa 335 (462)
T KOG1393|consen 256 HSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTA 335 (462)
T ss_pred eCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccH
Confidence 9987766654 11 12223345777776666689999999
Q ss_pred hHHHHHHHHHHcC--CCCCCCEEEEEEEChhHhhhheeeEeeccCCC
Q 010193 452 SIWYELAYIEAKG--RMCRGHRVWQIAFGSGFKCNSAVWQALQNVKP 496 (515)
Q Consensus 452 Si~~~La~~~~~g--~i~~GD~VlliafGsG~~~~sav~r~~~~~~~ 496 (515)
|+...|+.++... .--.|.||.+.++|+|......-+|...+..|
T Consensus 336 Sly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 336 SLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred HHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 9999999998865 33479999999999999888888888775443
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.70 E-value=8.2e-16 Score=160.37 Aligned_cols=310 Identities=12% Similarity=0.065 Sum_probs=192.9
Q ss_pred CeEEEEeeEecCCCCceecHHHHHHHhhhc-CCCChhhHHHH-----HHHHHHhCCCceeecCCCccCCCCCCcHHHHHH
Q 010193 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLT-GDFDESSLEFQ-----RKILERSGLGEETYFPEAMHAIPPKPSMAAARE 183 (515)
Q Consensus 110 ~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~-~~~~~~~~~f~-----~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ 183 (515)
+++|++.|+.-|=- .+.++....++.- .++... .|+ ++|..++|+.+|++.. .+
T Consensus 4 ~v~I~~~g~vs~lG---~~~~~~~aa~ragi~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~---------------~~ 63 (348)
T PRK06147 4 ALAIVGSGMVTAVG---LDAPSSCAAIRARLDNFQET--RFIDPPGGEWLIGAPVPLPPPWRG---------------PE 63 (348)
T ss_pred ceEEEecceeecCc---CCHHHHHHHHHccccccccc--ccccCCCCCceEeecCcCCcccCc---------------hH
Confidence 69999999998873 3334333333210 011100 000 1445555665554421 12
Q ss_pred HHHHHHHHHHHHHHHhCC-CCcCCcCEEEEeec------CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHH
Q 010193 184 EAEQVMYGALDNLFSNTN-VNPKDIGILVVNCS------LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDL 256 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~ag-i~p~dID~LI~~~s------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~l 256 (515)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..++.++|++....+++++ .||++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHH
Confidence 468899999999999999 89999999998643 2233446688999999996557789999 599999999999
Q ss_pred HHHHHhcCCCCeEEEEEeccCcCC----ccC------CCCccccccccccccccEEEEEecCCcccccccceeeeEEEEE
Q 010193 257 AKDLLQVNWNTYAVVVSTENITQN----WYF------GNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTH 326 (515)
Q Consensus 257 A~~lL~sg~~~~aLVVs~E~~S~~----~~~------~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~ 326 (515)
|.++|+.|..+.+||+++|.++.. ++. .+++. ...+|||||+++||++.+....+ +-++.. . .
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a-~--g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG-L--G 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE-E--E
Confidence 999999999999999999987641 111 12222 35789999999999976542211 112222 1 1
Q ss_pred eccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcc
Q 010193 327 KGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFK 405 (515)
Q Consensus 327 ~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~ 405 (515)
.+.+...+. .. .+. | +-.+.+ .. ..++.++. .+. .
T Consensus 216 ~~~~~~~~~---~~----------~~~------------------p---~~g~gl---~~-ai~~AL~~agl~------~ 251 (348)
T PRK06147 216 LGREPAPVG---ES----------EDL------------------P---LRGDGL---TQ-AIRAALAEAGCG------L 251 (348)
T ss_pred EeecCCCcc---cC----------CCC------------------C---CChHHH---HH-HHHHHHHHcCCC------H
Confidence 111111100 00 000 0 000010 00 11233332 232 3
Q ss_pred cccCEEEeccCCHHHHHHH-----HHHcCCCchhhhhhccccccccccccchHHHHHHHHHH--cCCCCCCCEEEEEEEC
Q 010193 406 LAFDHFCIHAGGRAVIDEL-----EKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEA--KGRMCRGHRVWQIAFG 478 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v-----~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~--~g~i~~GD~VlliafG 478 (515)
+|||+++.|..|....+.. .+.++-..+...- +.+-..+||+++++-.+++..... +...-+|+++++++-.
T Consensus 252 ~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 252 EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSD 330 (348)
T ss_pred HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecC
Confidence 7999999999877665443 3344432222211 345667999999999999886443 2345689999999988
Q ss_pred hhHhhhheeeEeec
Q 010193 479 SGFKCNSAVWQALQ 492 (515)
Q Consensus 479 sG~~~~sav~r~~~ 492 (515)
-.-..++++++..+
T Consensus 331 d~g~r~a~~l~~~~ 344 (348)
T PRK06147 331 DDGARAALVLEYRR 344 (348)
T ss_pred CCCceEEEEEeccc
Confidence 77778999988543
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.68 E-value=1.4e-15 Score=154.08 Aligned_cols=116 Identities=16% Similarity=0.239 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
..+|+.+|+++||+++|++++|||.+|+++.++ .+..+..++++||++ .|++++ +|++++.||.+|..++++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999987544 345688999999974 599995 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---Cc-c--CC--CCccccccccccccccEEEEEecCCc
Q 010193 265 WNTYAVVVSTENITQ---NW-Y--FG--NKKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~---~~-~--~~--~dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
..++||||++|..|. .+ + ++ ++|. +..+|+|||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 999999999998872 11 1 22 3455 6789999999999998654
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.57 E-value=1.4e-13 Score=139.92 Aligned_cols=117 Identities=18% Similarity=0.278 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
..+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.||+ +.+++.+ +|+++..||.+|..++++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999875433 4668899999986 5899995 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---CccC----CCCccccccccccccccEEEEEecCCc
Q 010193 265 WNTYAVVVSTENITQ---NWYF----GNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~---~~~~----~~dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
..++||||++|..+. .|.. +..|.. +...+++||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 999999999999875 2322 234442 5678999999999998654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.51 E-value=6.5e-13 Score=140.64 Aligned_cols=184 Identities=14% Similarity=0.226 Sum_probs=118.0
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCcee--ecCCCccCCCCCCcHHHH--H
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEET--YFPEAMHAIPPKPSMAAA--R 182 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~~~~~~~~~~~~~--~ 182 (515)
++|+|+|+|+..|. -.+.+++.+.+.. +. +.+-. +| +..+...+. ..+.... +.....++. .
T Consensus 1 ~~i~I~G~g~~~p~---g~~~~~~~~~l~~-g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~ 68 (406)
T cd00834 1 RRVVITGLGAVTPL---GNGVEEFWEALLA-GRSGIRPIT-RF-----DASGFPSRIAGEVPDFDP--EDYLDRKELRRM 68 (406)
T ss_pred CcEEEECcceeCCC---cCCHHHHHHHHHc-CCCeeEECC-cc-----cccCCCccEEEEcCCCCh--hhcCCHHHhccC
Confidence 37999999999998 3677777776542 11 11000 00 001111111 1111110 000011111 1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeecC-C--------------------------CCCCChHHHHHHHc
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCSL-F--------------------------NPTPSLSAMIVNKY 231 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~----LI~~~s~-~--------------------------~~~Ps~a~~I~~~L 231 (515)
....+|+..|++++|+++|+++++||. ++++++. . ...+..+.+|+..|
T Consensus 69 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 69 DRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 247789999999999999999876654 4444322 1 12355788999999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------------------ccCCCCccc
Q 010193 232 RLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN----------------------WYFGNKKSM 289 (515)
Q Consensus 232 Gl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~----------------------~~~~~dr~~ 289 (515)
|++ ..++.++ .+|++++.||..|.++|++|..++|||+++|..+.. ..+...+.
T Consensus 149 gl~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~- 224 (406)
T cd00834 149 GLR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR- 224 (406)
T ss_pred CCC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC-
Confidence 996 5788999 599999999999999999999999999999987610 00111111
Q ss_pred cccccccccccEEEEEecCCc
Q 010193 290 LIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 290 lv~~~lfgDGAaA~LLs~~~~ 310 (515)
...++||||+|+||++.+.
T Consensus 225 --~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 --DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred --CCEeeeccEEEEEEecHHH
Confidence 2468999999999997653
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.50 E-value=1.1e-12 Score=138.72 Aligned_cols=93 Identities=13% Similarity=0.198 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.||++++ ++...|..+..++.++|+++++++++++ ++|++++.+|.+|..++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998864 4555778888899999998558899999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010193 264 NWNTYAVVVSTENIT 278 (515)
Q Consensus 264 g~~~~aLVVs~E~~S 278 (515)
|..++|||+++|.+|
T Consensus 101 G~~~~vLv~g~e~~s 115 (386)
T cd00751 101 GEADVVVAGGVESMS 115 (386)
T ss_pred CCCCeEEEeeeeccc
Confidence 999999999999865
No 48
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.42 E-value=2.9e-13 Score=111.39 Aligned_cols=79 Identities=20% Similarity=0.403 Sum_probs=60.6
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCccccccccee
Q 010193 240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRL 319 (515)
Q Consensus 240 ~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L 319 (515)
||++ ++|++++.||++|.++++++..++||||++|..+. +.+..++. ...+|||||+|+||++.++. .+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecCCC----CCeE
Confidence 7999 59999999999999999999999999999999988 55555554 45689999999999997432 3554
Q ss_pred eeEEEEEeccC
Q 010193 320 VHIVRTHKGAD 330 (515)
Q Consensus 320 ~~~v~t~~~~d 330 (515)
. .++..+|
T Consensus 72 l---~~~~~td 79 (80)
T PF08545_consen 72 L---DSHLRTD 79 (80)
T ss_dssp E---EEEEEE-
T ss_pred E---EEEEEcC
Confidence 4 3444454
No 49
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=1.7e-11 Score=130.04 Aligned_cols=94 Identities=15% Similarity=0.218 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|+|||.+|++|+ +....|..+..++.++|++..+++++++ .+|++|+.++.+|.+++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999875 3334566788899999998558999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997764
No 50
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.41 E-value=9.1e-12 Score=131.79 Aligned_cols=94 Identities=17% Similarity=0.260 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|+++||+++|++++|||.+|+++. ++...|..+..++.++|++.++++++++ .+|++++.++.+|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998764 4454577788899999998568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+++||+++|.+|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998653
No 51
>PRK09051 beta-ketothiolase; Provisional
Probab=99.40 E-value=2.6e-11 Score=128.59 Aligned_cols=94 Identities=15% Similarity=0.227 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCC-ChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTP-SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++|+|||.+|++|+ ++...+ ..+..+...+|++.++++++++ .+|++|+.|+.+|.++++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 444433 4555566778997679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+++||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998774
No 52
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=5.1e-11 Score=126.12 Aligned_cols=92 Identities=14% Similarity=0.070 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCC--CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNP--TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++++|||.+|++++++.. .+..+..|+++||++ ..++++++ .+|+++..++..|..+|+
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999988754332 122336899999997 68899999 499999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010193 263 VNWNTYAVVVSTENIT 278 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S 278 (515)
+|..++||||++|..+
T Consensus 102 sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 102 SGVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCCEEEEEEEEEcc
Confidence 9999999999999764
No 53
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=8.2e-11 Score=124.62 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCC--CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNP--TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
..+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|++++.+|..|..++
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998764 3332 467788999999997 78899999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCc
Q 010193 262 QVNWNTYAVVVSTENIT 278 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S 278 (515)
++|..+++||+++|..|
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999755
No 54
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.35 E-value=6.4e-11 Score=124.52 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+++.++ +....|..+.+++.++|++ ++.+++++ .+|++++.++..|.+++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999998764 4443577889999999997 78999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 55
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=1.1e-10 Score=123.94 Aligned_cols=94 Identities=18% Similarity=0.242 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhC-CCCcCCcCEEEEeec-CCCCCCChHHHHHH-HcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNT-NVNPKDIGILVVNCS-LFNPTPSLSAMIVN-KYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~~s-~~~~~Ps~a~~I~~-~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
..+|+.+|++++|+++ |++|+|||.+|++++ ++...|...++++. .+|++..+++++++ .+|++|+.|+..|.+++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 6899999999999997 999999999999864 45555666666554 45997458999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+||+++|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998864
No 56
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.31 E-value=6.3e-11 Score=126.46 Aligned_cols=122 Identities=14% Similarity=0.142 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeecC-CCC-------------------CCChHHHHHHHcCCCCCeeE
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIG----ILVVNCSL-FNP-------------------TPSLSAMIVNKYRLRGNIRS 239 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID----~LI~~~s~-~~~-------------------~Ps~a~~I~~~LGl~~~~~~ 239 (515)
....|+..|++++|+++|+++++|| .||++++. ++. .+..+..|+..+|++ .++
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 3567999999999999999999998 77777542 221 345677899999996 478
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------cc------CCCCccccccccccccccEEE
Q 010193 240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN----------WY------FGNKKSMLIPNCLFRVGCSAV 303 (515)
Q Consensus 240 ~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~----------~~------~~~dr~~lv~~~lfgDGAaA~ 303 (515)
+.++ .+|++++.||..|.++|++|..+++||+++|..... +. .+-+.. -...++||||+|+
T Consensus 164 ~~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (424)
T smart00825 164 VTVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVV 240 (424)
T ss_pred cccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEE
Confidence 9999 599999999999999999999999999999974320 10 011111 1356789999999
Q ss_pred EEecCCc
Q 010193 304 LLSNKRK 310 (515)
Q Consensus 304 LLs~~~~ 310 (515)
||++.+.
T Consensus 241 VLe~~e~ 247 (424)
T smart00825 241 VLKRLSD 247 (424)
T ss_pred EEccHHH
Confidence 9997543
No 57
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=3e-10 Score=120.20 Aligned_cols=92 Identities=14% Similarity=0.229 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +..+++++ ++|++++.+|.+|..++++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999988643 222233468899999998 56779999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010193 264 NWNTYAVVVSTENIT 278 (515)
Q Consensus 264 g~~~~aLVVs~E~~S 278 (515)
|..+++|||++|.+|
T Consensus 99 G~~~~vLvvg~e~~s 113 (385)
T PRK12578 99 GLVDMAIAVGVDKMT 113 (385)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999865
No 58
>PRK05790 putative acyltransferase; Provisional
Probab=99.27 E-value=5e-10 Score=118.79 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++ .+|++++.+|..|.+++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999998764 2222344455577788987568899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010193 264 NWNTYAVVVSTENIT 278 (515)
Q Consensus 264 g~~~~aLVVs~E~~S 278 (515)
|..+++||++.|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999999754
No 59
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=3.5e-10 Score=120.13 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|+|||.+|++++. .......+......+|++.++++++++ ++|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999998653 333333444445556777679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||+++|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999883
No 60
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.25 E-value=2.6e-10 Score=121.20 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCC-cC----EEEEeecCC-----------------------CCC--CChHHHHHHHcCC
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKD-IG----ILVVNCSLF-----------------------NPT--PSLSAMIVNKYRL 233 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~d-ID----~LI~~~s~~-----------------------~~~--Ps~a~~I~~~LGl 233 (515)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 46789999999999999998765 33 233333210 111 4567889999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC--------------------ccCCCCccccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN--------------------WYFGNKKSMLIPN 293 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~--------------------~~~~~dr~~lv~~ 293 (515)
+ ..+++.+. .+|++++.||..|.++|++|..+.+||.++|..+.. ...+.|+. -..
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 35789999 599999999999999999999999999999986510 00011111 035
Q ss_pred cccccccEEEEEecCCc
Q 010193 294 CLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 294 ~lfgDGAaA~LLs~~~~ 310 (515)
.++||||+++||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 68999999999998654
No 61
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.25 E-value=1.2e-09 Score=117.19 Aligned_cols=119 Identities=13% Similarity=0.205 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC------------------EEEEeec----------------CCC-------CCCCh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIG------------------ILVVNCS----------------LFN-------PTPSL 223 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID------------------~LI~~~s----------------~~~-------~~Ps~ 223 (515)
...++..|++++|+++|+++.+.+ .++..+. +.. ..|+.
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 466889999999999999654422 1111111 011 34678
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc---------------CcCC--c-----
Q 010193 224 SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN---------------ITQN--W----- 281 (515)
Q Consensus 224 a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~---------------~S~~--~----- 281 (515)
+..|+.+||++ .++++++ .+|++++.||..|.++|++|..+++||+++|. ++.. +
T Consensus 155 a~~i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 89999999996 5789999 59999999999999999999999999999993 2210 0
Q ss_pred cCC-CCccccccccccccccEEEEEecCCc
Q 010193 282 YFG-NKKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 282 ~~~-~dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
.+. .+|+ ..++||||+|+||++.+.
T Consensus 232 rpfd~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 232 KPFSKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCCCCC----CeeeeccEEEEEECcHHH
Confidence 000 2333 478999999999997553
No 62
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.25 E-value=3.6e-10 Score=114.58 Aligned_cols=116 Identities=16% Similarity=0.232 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
-.+|+.+|+++||+++|++++|||.+++.+......|+ ..++++||++ .+++.+ +|+++..||.+|..++++|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcC
Confidence 56799999999999999999999999999877666665 4999999965 599996 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---Ccc-C---CCCccccccccccccccEEEEEecCC
Q 010193 265 WNTYAVVVSTENITQ---NWY-F---GNKKSMLIPNCLFRVGCSAVLLSNKR 309 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~---~~~-~---~~dr~~lv~~~lfgDGAaA~LLs~~~ 309 (515)
..++||++++-.... .|. + ++.|.. +...---||+|+||++..
T Consensus 127 ~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 127 GAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 999999999766542 222 1 234442 333345689999998764
No 63
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=5.9e-10 Score=118.33 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCC-C-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN-P-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~-~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+|+..+++.+|+++|++|++||-||+.|.... . .+.++.+++-+-|++.+++++-++ +.|++++.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 7899999999999999999999999999976432 2 377888899999999899999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+-+|..++|.+|.
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999995
No 64
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.25 E-value=4.4e-10 Score=119.28 Aligned_cols=120 Identities=12% Similarity=0.093 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCE----EEEeecCC------------------CC--------CC-ChHHHHHHHcCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGI----LVVNCSLF------------------NP--------TP-SLSAMIVNKYRL 233 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~----LI~~~s~~------------------~~--------~P-s~a~~I~~~LGl 233 (515)
..+++.+|++++|+++|+++++||. +++.++.. .. .+ ..+..|...||+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 5789999999999999999999886 55554211 00 11 145678889999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----------c--cC--------CCCcccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----------W--YF--------GNKKSMLIP 292 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~-----------~--~~--------~~dr~~lv~ 292 (515)
+ .+++.+. .+|++++.||..|.++|++|..+.+||+++|..... + +. +-|+. -.
T Consensus 151 ~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~--~~ 225 (407)
T TIGR03150 151 K--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD--RD 225 (407)
T ss_pred C--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--CC
Confidence 5 5788888 599999999999999999999999999999963210 0 00 00111 02
Q ss_pred ccccccccEEEEEecCC
Q 010193 293 NCLFRVGCSAVLLSNKR 309 (515)
Q Consensus 293 ~~lfgDGAaA~LLs~~~ 309 (515)
..+.||||+|+||++.+
T Consensus 226 g~~~gEGAaalvL~~~~ 242 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELE 242 (407)
T ss_pred cEEEeceEEEEEEeeHH
Confidence 46789999999999765
No 65
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=6.5e-10 Score=118.01 Aligned_cols=91 Identities=14% Similarity=0.313 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCC---CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNP---TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~---~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~l 260 (515)
..+|+.+|++++|+++|++|+|||.+|++++. +.. .++....+...++ .++++++++ ++|++++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 68899999999999999999999999998743 332 2244445555555 478999999 6999999999999999
Q ss_pred HhcCCCCeEEEEEeccCc
Q 010193 261 LQVNWNTYAVVVSTENIT 278 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S 278 (515)
+++|..+++||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999766
No 66
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.20 E-value=1.5e-09 Score=115.43 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeec-CCC-------------------CCCChHHHHHHHcCCCCCeeE
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCS-LFN-------------------PTPSLSAMIVNKYRLRGNIRS 239 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID~----LI~~~s-~~~-------------------~~Ps~a~~I~~~LGl~~~~~~ 239 (515)
....|+..|++++|+++|++++++|. ++++++ .++ ..+..+..|+..+|++ .++
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 36789999999999999999888774 555543 111 1244677899999996 488
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----------------ccCCCCccccccccccccccEE
Q 010193 240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----------------WYFGNKKSMLIPNCLFRVGCSA 302 (515)
Q Consensus 240 ~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~-----------------~~~~~dr~~lv~~~lfgDGAaA 302 (515)
+.+. .+|++++.||..|.++|++|..+.+||+++|..+.. ..+...+. ...++||||+|
T Consensus 164 ~~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAaa 239 (421)
T cd00833 164 LTVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVGV 239 (421)
T ss_pred eeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEEE
Confidence 9999 599999999999999999999999999999975310 01111111 34679999999
Q ss_pred EEEecCCc
Q 010193 303 VLLSNKRK 310 (515)
Q Consensus 303 ~LLs~~~~ 310 (515)
+||++.+.
T Consensus 240 lvL~~~~~ 247 (421)
T cd00833 240 VVLKRLSD 247 (421)
T ss_pred EEEeeHHH
Confidence 99997654
No 67
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=1.9e-09 Score=114.34 Aligned_cols=94 Identities=10% Similarity=0.147 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCC-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|+.++|||.+|++++ ++.. .+.++.+++..+|++..+++++++ .+|++|+.|+..|...++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 5889999999999999988899999999864 3333 367777899999998569999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+||+++|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998763
No 68
>PRK06158 thiolase; Provisional
Probab=99.16 E-value=2.8e-09 Score=112.85 Aligned_cols=87 Identities=11% Similarity=0.049 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
..+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ ..+.+++. .||+++..++..|..++++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999998763 233443 5799999997 57888998 59999999999999999999
Q ss_pred CCCeEEEE-Eecc
Q 010193 265 WNTYAVVV-STEN 276 (515)
Q Consensus 265 ~~~~aLVV-s~E~ 276 (515)
..++|||+ +.|.
T Consensus 103 ~~d~vLV~~g~~~ 115 (384)
T PRK06158 103 LCDVALICYGSNQ 115 (384)
T ss_pred CCCEEEEeecccc
Confidence 99999998 4443
No 69
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.16 E-value=2.6e-09 Score=112.02 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
+.+|+..|++++++ |++ +|||.+|+.+.... .+..+..+....|++..++++.++ .+|++++.++..|.+++++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 68899999999866 896 89999999865321 244455688999998689999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCcC
Q 010193 265 WNTYAVVVSTENITQ 279 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~ 279 (515)
..+.+|+++.|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999874
No 70
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=3.9e-09 Score=112.40 Aligned_cols=184 Identities=12% Similarity=0.111 Sum_probs=114.7
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCcee--ecCCCc--cCCCCCCcHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEET--YFPEAM--HAIPPKPSMAAAR 182 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~--~~~~~~~~~~~~~ 182 (515)
++|.|+|+||..|- -.+.+++.+.+.. +. +.+-. +| ...+...+. .+++.. ...++. . ....
T Consensus 2 ~~v~ItG~g~~~p~---g~~~~~~w~~l~~-g~~~~~~~~-~~-----~~~~~~~~~~g~i~~f~~~~~~~~~-~-~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPL---GNDVESTWKNLLA-GKSGIGPIT-HF-----DTSDLAVKIAGEVKDFNPDDYMSRK-E-ARRM 69 (411)
T ss_pred CcEEEEcceEECCC---cCCHHHHHHHHHh-CCCcEEECC-cc-----cccCCCccEEEEeCCcChhhcCCHH-H-hhcC
Confidence 46999999999998 3677888776543 11 00000 00 001111110 111000 001110 0 0111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeecCCC--------------------------CCCC-hHHHHHHHc
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIG----ILVVNCSLFN--------------------------PTPS-LSAMIVNKY 231 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID----~LI~~~s~~~--------------------------~~Ps-~a~~I~~~L 231 (515)
.....|+..|++++|+++|++++++| .++++++... ..++ .+..|...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 23568899999999999999998888 4666543110 1112 456789999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCc---------------------cCCCCcccc
Q 010193 232 RLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW---------------------YFGNKKSML 290 (515)
Q Consensus 232 Gl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~---------------------~~~~dr~~l 290 (515)
|++ -+++-+. .+|++++.||..|.++|++|..+.+||.++|..+..+ ..+-|+..
T Consensus 150 gl~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~- 225 (411)
T PRK07314 150 GAK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR- 225 (411)
T ss_pred CCC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC-
Confidence 996 4678888 4999999999999999999999999999999743210 00001110
Q ss_pred ccccccccccEEEEEecCC
Q 010193 291 IPNCLFRVGCSAVLLSNKR 309 (515)
Q Consensus 291 v~~~lfgDGAaA~LLs~~~ 309 (515)
..+++||||+|+||++.+
T Consensus 226 -dG~~~geGAaavvL~~~~ 243 (411)
T PRK07314 226 -DGFVMGEGAGILVLEELE 243 (411)
T ss_pred -CCEeEEceEEEEEEeeHH
Confidence 246889999999999764
No 71
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.13 E-value=4.8e-09 Score=113.01 Aligned_cols=94 Identities=16% Similarity=0.253 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCC-hHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPS-LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|+++.+++++++ .+|++|+.++..|...|+
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~ 149 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 149 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 4444444 334566778998668999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+||++.|.+|.
T Consensus 150 sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 150 AGFYDIGIGAGVESMTT 166 (452)
T ss_pred cCCCCeEEEEeEEecCC
Confidence 99999999999998753
No 72
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=3.6e-10 Score=119.84 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCC-hHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPS-LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+|+.+|++++|+++|++|+|||.+|+++. ++...|+ .+..+..++|++.++++++++ ++|++|+.|+.+|..+++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 4555554 788899999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999985
No 73
>PRK08256 lipid-transfer protein; Provisional
Probab=99.10 E-value=8.8e-09 Score=109.27 Aligned_cols=89 Identities=13% Similarity=0.156 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+++.+.. +... ...+...+|++ ++++++++ .+|++++.+|..|.++|++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999887542 2211 23567789996 67889999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010193 264 NWNTYAVVVSTENIT 278 (515)
Q Consensus 264 g~~~~aLVVs~E~~S 278 (515)
|..+++||+++|..|
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999865
No 74
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.09 E-value=1.2e-08 Score=108.37 Aligned_cols=93 Identities=18% Similarity=0.159 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCC-CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..++..+|++.+++++.++ .+|++++.++..|.+.+++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 588999999999999999999999999876421 21234555688999997668899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010193 264 NWNTYAVVVSTENIT 278 (515)
Q Consensus 264 g~~~~aLVVs~E~~S 278 (515)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988765
No 75
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.07 E-value=1.1e-08 Score=109.17 Aligned_cols=121 Identities=18% Similarity=0.293 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHhCCCC---cCCcCEEEEeec----------------CCCCCC---------ChHHHHHHHcCCCCC
Q 010193 185 AEQVMYGALDNLFSNTNVN---PKDIGILVVNCS----------------LFNPTP---------SLSAMIVNKYRLRGN 236 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~---p~dID~LI~~~s----------------~~~~~P---------s~a~~I~~~LGl~~~ 236 (515)
...++..|++++|+++|++ +++|++++.++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 5689999999999999986 567777765432 111112 2566788999996
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CcCC----c------------------cCCCCccccccc
Q 010193 237 IRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQN----W------------------YFGNKKSMLIPN 293 (515)
Q Consensus 237 ~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~-~S~~----~------------------~~~~dr~~lv~~ 293 (515)
.+++.+++ +|++++.||..|.++|++|..+.+||+++|. .+.. + ..+-|+.. ..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 46788995 9999999999999999999999999999864 2110 0 00011110 24
Q ss_pred cccccccEEEEEecCCc
Q 010193 294 CLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 294 ~lfgDGAaA~LLs~~~~ 310 (515)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 68899999999997553
No 76
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.07 E-value=1.3e-08 Score=109.05 Aligned_cols=122 Identities=13% Similarity=0.137 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCc-C----EEEEeecCC----------------------CCCC-----ChHHHHHHHc
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDI-G----ILVVNCSLF----------------------NPTP-----SLSAMIVNKY 231 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dI-D----~LI~~~s~~----------------------~~~P-----s~a~~I~~~L 231 (515)
....++..|++++|+++|++++++ + .+++.++.. ...| ..+..|...|
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 366789999999999999988776 3 344444311 0011 2356788999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------ccC------------CCCccc
Q 010193 232 RLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN----------WYF------------GNKKSM 289 (515)
Q Consensus 232 Gl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~----------~~~------------~~dr~~ 289 (515)
|++ .+++-+. .+|++++.||..|.++|++|..+.+||+++|..... .+. +-|+..
T Consensus 161 gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 5778888 599999999999999999999999999999973210 000 001110
Q ss_pred cccccccccccEEEEEecCCc
Q 010193 290 LIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 290 lv~~~lfgDGAaA~LLs~~~~ 310 (515)
...+.||||+++||++.+.
T Consensus 238 --~G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 238 --DGFVMGEGAGILVIETLEH 256 (424)
T ss_pred --CCeEEecceEEEEEeeHHH
Confidence 2356799999999997543
No 77
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=9.7e-09 Score=108.86 Aligned_cols=94 Identities=13% Similarity=0.245 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ...-+..+.+++..+|++.+++++.++ .+|++|+.|+..|..++++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999998643 222345677788999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998874
No 78
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=7.7e-10 Score=117.82 Aligned_cols=94 Identities=17% Similarity=0.233 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|+|||.+|++++ +....|.++.+++..+|++.++++++++ .+|++|+.++..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999875 4556688888899999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999999885
No 79
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=9.1e-10 Score=116.86 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999999875 3212344556789999997679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999885
No 80
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.02 E-value=1.4e-09 Score=115.64 Aligned_cols=94 Identities=16% Similarity=0.330 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCC-CChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPT-PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+|+.+|++++|+++|++|+|||.+|++|. +.... +..+.......|++.++++++++ ++|++|+.||.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 7899999999999999999999999999875 43333 34556666888997679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+++|++++|.+|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999986
No 81
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.99 E-value=5e-08 Score=104.35 Aligned_cols=121 Identities=10% Similarity=0.071 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeecC-C-----------------C--------CCC-ChHHHHHHHcCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIG----ILVVNCSL-F-----------------N--------PTP-SLSAMIVNKYRL 233 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID----~LI~~~s~-~-----------------~--------~~P-s~a~~I~~~LGl 233 (515)
...++..|+.++|+++|+++++.+ .+++.++. . . ..| ..+..|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 557889999999999999754433 24444321 0 0 112 367788999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCc----------cC-----------CCCcccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW----------YF-----------GNKKSMLIP 292 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~----------~~-----------~~dr~~lv~ 292 (515)
+ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ .. +-|+.. .
T Consensus 154 ~--Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 228 (414)
T PRK08722 154 R--GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--D 228 (414)
T ss_pred C--CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--C
Confidence 7 5788889 5999999999999999999999999999999853210 00 001110 2
Q ss_pred ccccccccEEEEEecCCc
Q 010193 293 NCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 293 ~~lfgDGAaA~LLs~~~~ 310 (515)
..+.||||+++||++...
T Consensus 229 G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred ceEeeceEEEEEEccHHH
Confidence 467899999999997653
No 82
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.98 E-value=1.1e-07 Score=101.37 Aligned_cols=122 Identities=15% Similarity=0.109 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeecCC--------------------------CCCC-ChHHHHHHHcC
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCSLF--------------------------NPTP-SLSAMIVNKYR 232 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID~----LI~~~s~~--------------------------~~~P-s~a~~I~~~LG 232 (515)
....++..|+.++|+++|+++++++. +++.++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 36789999999999999999877763 44433210 0112 46778999999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-cCC---------c-----------cCCCCccccc
Q 010193 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQN---------W-----------YFGNKKSMLI 291 (515)
Q Consensus 233 l~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~-S~~---------~-----------~~~~dr~~lv 291 (515)
++ -+++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. . ..+-|+..
T Consensus 151 l~--Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 225 (406)
T PRK08439 151 LK--GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR-- 225 (406)
T ss_pred CC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC--
Confidence 97 4678888 599999999999999999999999999999963 210 0 00011110
Q ss_pred cccccccccEEEEEecCCc
Q 010193 292 PNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 292 ~~~lfgDGAaA~LLs~~~~ 310 (515)
...++|+||+++||++.+.
T Consensus 226 ~G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 226 DGFVMGEGAGALVLEEYES 244 (406)
T ss_pred CcEEeeCceEEEEEccHHH
Confidence 2467899999999997543
No 83
>PRK06059 lipid-transfer protein; Provisional
Probab=98.96 E-value=2.3e-09 Score=114.01 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-C-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-L-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++++|||.||++++ + .+..|..+..|+.++|++ ++++++++ .+|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999998764 2 233455678999999997 68899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+++||+++|..|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998763
No 84
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=3.2e-09 Score=113.87 Aligned_cols=94 Identities=13% Similarity=0.293 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+|++|. +....+..+..++..+|++.++++++++ .+|++++.++..|.+++++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998864 3233466778899999997578999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+++||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998775
No 85
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=7.2e-08 Score=102.06 Aligned_cols=93 Identities=13% Similarity=0.233 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCC-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++++|||.+|+++.. ... .+..+..+.-..|++..+.++.++ ++|++++.++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 57899999999999999999999999987542 111 133344344457776568889999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010193 263 VNWNTYAVVVSTENIT 278 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S 278 (515)
+|..+.+||++.|.+|
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999998553
No 86
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.91 E-value=5.3e-09 Score=111.05 Aligned_cols=93 Identities=12% Similarity=0.083 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHH-HHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAM-IVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+++.+|++++|++++++|+|||.+|++++ ++...+..+.. +++.+|+. ++++++++ .+|++|+.++.+|..+++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999875 44434555553 67778886 79999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 87
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.88 E-value=1.4e-07 Score=100.61 Aligned_cols=188 Identities=12% Similarity=0.142 Sum_probs=111.0
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHH--HHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAR--EEAE 186 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~--~ea~ 186 (515)
++|.|.|+|+-.|- -.+.+++.+.+.. |+ + -++...+...-.++..+....-.....+....-+..| ....
T Consensus 2 ~~VvITG~g~vtp~---G~~~~~~~~~L~~-g~-s--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTAL---GEDWQTIAARLKA-GR-N--AVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CC-C--CEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 46999999999998 4677888776542 11 0 0000000000012222211100000000000001111 2356
Q ss_pred HHHHHHHHHHHHhCCCCc------CCcCEEEEeecCC------------------C--------CCCC-hHHHHHHHcCC
Q 010193 187 QVMYGALDNLFSNTNVNP------KDIGILVVNCSLF------------------N--------PTPS-LSAMIVNKYRL 233 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p------~dID~LI~~~s~~------------------~--------~~Ps-~a~~I~~~LGl 233 (515)
.++..|++++|+++|++. ++++++ +.++.. . ..|+ .+..|+..||+
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~-~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRMGIA-YGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcEEEE-EeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 789999999999999832 334444 443210 0 1232 57789999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----c-----c-----------CCCCccccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN----W-----Y-----------FGNKKSMLIPN 293 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~----~-----~-----------~~~dr~~lv~~ 293 (515)
+ -+++-++ .+|++++.||..|.++|+.|..+.+||.++|..+.. + . .+-|+.. ..
T Consensus 154 ~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 K--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred C--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 7 5788899 499999999999999999999999999999975420 0 0 0011110 24
Q ss_pred cccccccEEEEEecCC
Q 010193 294 CLFRVGCSAVLLSNKR 309 (515)
Q Consensus 294 ~lfgDGAaA~LLs~~~ 309 (515)
.+.|+||++++|++.+
T Consensus 229 ~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 229 LVIGEGAGTLVLEELE 244 (405)
T ss_pred EeeeccEEEEEEccHH
Confidence 6789999999999754
No 88
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.85 E-value=9.9e-09 Score=108.85 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCC--CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNP--TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +..++++. .||+++..++..|...++
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHh
Confidence 57899999999999999999999999987644322 566788899999997 58899999 589999999999999999
Q ss_pred cCCCCeEEEEEeccC
Q 010193 263 VNWNTYAVVVSTENI 277 (515)
Q Consensus 263 sg~~~~aLVVs~E~~ 277 (515)
+|..++||||+.|..
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999974
No 89
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.85 E-value=1.1e-08 Score=102.80 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
+.+|+.+|++.+|++++++|++||.+|++|. +....+..+..+.-..|++.+++++.++ +.|++|+.|+.+|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 7899999999999999999999999999985 3344677788888889998889999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcCC
Q 010193 264 NWNTYAVVVSTENITQN 280 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~~ 280 (515)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999873
No 90
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.83 E-value=4e-07 Score=98.07 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcC-----CcCEEEEeecCCC------------------C--------CC-ChHHHHHHHcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPK-----DIGILVVNCSLFN------------------P--------TP-SLSAMIVNKYR 232 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~-----dID~LI~~~s~~~------------------~--------~P-s~a~~I~~~LG 232 (515)
...++..|+.++|+++|+++. +...++++++... . .+ ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 567899999999999998542 3455666643110 0 11 24567999999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----------c-----------cCCCCcccc
Q 010193 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----------W-----------YFGNKKSML 290 (515)
Q Consensus 233 l~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~-----------~-----------~~~~dr~~l 290 (515)
++ -+++-++ .+|++++.||..|.++|++|..+.+||.++|..... + ..+-|+..
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 87 5788889 499999999999999999999999999998863110 0 00001110
Q ss_pred ccccccccccEEEEEecCCc
Q 010193 291 IPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 291 v~~~lfgDGAaA~LLs~~~~ 310 (515)
..++.||||+|+||++.+.
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 2467899999999997653
No 91
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.82 E-value=2.3e-07 Score=98.20 Aligned_cols=243 Identities=14% Similarity=0.162 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHhCCCCc--CCcCEEEEeecCC--------------------C--------CCC-ChHHHHHHHcCCCCC
Q 010193 188 VMYGALDNLFSNTNVNP--KDIGILVVNCSLF--------------------N--------PTP-SLSAMIVNKYRLRGN 236 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p--~dID~LI~~~s~~--------------------~--------~~P-s~a~~I~~~LGl~~~ 236 (515)
++..|++++|+++|+++ +++++++-.+... . ..| ..+..|+..+|++
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~-- 136 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ-- 136 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--
Confidence 55688999999999964 5565555332110 0 112 2466788899997
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CcCC---------------ccCC-CCccccccccccccc
Q 010193 237 IRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQN---------------WYFG-NKKSMLIPNCLFRVG 299 (515)
Q Consensus 237 ~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~-~S~~---------------~~~~-~dr~~lv~~~lfgDG 299 (515)
-+++-+. .+|++++.||..|.++|+.|..+.+||.++|. ++.. ..+. .+|+ ..++|||
T Consensus 137 Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEG 211 (381)
T PRK05952 137 GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEG 211 (381)
T ss_pred Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Ccccccc
Confidence 4788899 49999999999999999999999999999996 4321 0001 1122 4679999
Q ss_pred cEEEEEecCCcccccccceeee-EEEEEeccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchh
Q 010193 300 CSAVLLSNKRKDRRQAKYRLVH-IVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVS 378 (515)
Q Consensus 300 AaA~LLs~~~~~~~~~~~~L~~-~v~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~s 378 (515)
|++++|++.+...++. -++.. +......+|+.. ...+. .+ ++
T Consensus 212 aa~lvLe~~~~A~~rg-~~i~a~I~g~~~~~d~~~---~~~~~-----------~~-----~~----------------- 254 (381)
T PRK05952 212 GAILVLESAELAQKRG-AKIYGQILGFGLTCDAYH---MSAPE-----------PD-----GK----------------- 254 (381)
T ss_pred EEEEEEeeHHHHHhCC-CceEEEEEEEEecCCCCC---CCCCC-----------CC-----HH-----------------
Confidence 9999999764322111 11111 111221222211 00000 00 00
Q ss_pred hhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHH-----HHHcCCCchhhhhhccccccccccccch
Q 010193 379 EQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDEL-----EKNLQLLPVHVEASRMTLHRFGNTSSSS 452 (515)
Q Consensus 379 e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v-----~~~Lgl~~e~~~~S~~~l~r~GNtsSaS 452 (515)
. .....++.++. .+. .+|||++..|..+...-|.. .+.++ +++.- ..+=..+||+.+++
T Consensus 255 -~----~~~ai~~Al~~agi~------p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v-~s~K~~~GH~~~Aa 319 (381)
T PRK05952 255 -S----AIAAIQQCLARSGLT------PEDIDYIHAHGTATRLNDQREANLIQALFP---HRVAV-SSTKGATGHTLGAS 319 (381)
T ss_pred -H----HHHHHHHHHHHhCCC------HHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCee-ecchhhhccChHHH
Confidence 0 00111334432 233 37999999999887665543 44444 12211 12345699999999
Q ss_pred HHHHHHHH---HHcCCCCC---------------------CCEEEEEEEChhHhhhheeeE
Q 010193 453 IWYELAYI---EAKGRMCR---------------------GHRVWQIAFGSGFKCNSAVWQ 489 (515)
Q Consensus 453 i~~~La~~---~~~g~i~~---------------------GD~VlliafGsG~~~~sav~r 489 (515)
-.+++..+ +++|.+-| =++++..+||-|-.-.++|++
T Consensus 320 G~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 320 GALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 88777653 34444322 145677888887766666664
No 92
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.80 E-value=8.1e-07 Score=97.10 Aligned_cols=92 Identities=13% Similarity=0.061 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCC--cCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVN--PKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~--p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|++++|+++|++ ++|||.+++.+............++.++|+.+ ....... .||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999 99999998764321222234578999999974 4444555 689999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010193 263 VNWNTYAVVVSTENIT 278 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S 278 (515)
+|..+.|||+++|..+
T Consensus 105 sG~advVLv~G~E~~~ 120 (498)
T PRK08257 105 AGEADVALVAGAEAQS 120 (498)
T ss_pred CCCCCEEEEeeeeecc
Confidence 9999999999999753
No 93
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.79 E-value=5.2e-07 Score=96.75 Aligned_cols=251 Identities=12% Similarity=0.085 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHhCCCC-cCCcCE----EEEeecCCC------------------C--------CC-ChHHHHHHHcC
Q 010193 185 AEQVMYGALDNLFSNTNVN-PKDIGI----LVVNCSLFN------------------P--------TP-SLSAMIVNKYR 232 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~-p~dID~----LI~~~s~~~------------------~--------~P-s~a~~I~~~LG 232 (515)
..+++..|+.++|+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 5789999999999999998 666653 333322110 0 01 24567888899
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCc----------c------------CCCCcccc
Q 010193 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW----------Y------------FGNKKSML 290 (515)
Q Consensus 233 l~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~----------~------------~~~dr~~l 290 (515)
++ -+++.++ .+|++++.||..|.++|++|..+.+||.++|.....+ . .+-|+..
T Consensus 157 l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 97 5778899 5999999999999999999999999999999732100 0 0001110
Q ss_pred ccccccccccEEEEEecCCcccccccceeeeEE-EEEeccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccc
Q 010193 291 IPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIV-RTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITT 369 (515)
Q Consensus 291 v~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v-~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~ 369 (515)
...+.||||+|+||++.+....+ +-++...+ ......|+.. +..+.
T Consensus 233 -~G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~p~---------------------------- 279 (421)
T PTZ00050 233 -AGFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAHH---ITAPH---------------------------- 279 (421)
T ss_pred -CCEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCCC----------------------------
Confidence 24678999999999976532211 11222211 1111122110 00000
Q ss_pred cCCcccchhhhHHHHHHHHHHHHHhh--hccCcccCcccccCEEEeccCCHHHHH-----HHHHHcCCCc-hhhhhhccc
Q 010193 370 LGPVVLPVSEQLLFFATLVIKKLFNR--NVKPYIPDFKLAFDHFCIHAGGRAVID-----ELEKNLQLLP-VHVEASRMT 441 (515)
Q Consensus 370 lgp~vlp~se~~~~~~~~~~~~v~~~--~~~~~~p~~~~did~~~~H~~g~~vl~-----~v~~~Lgl~~-e~~~~S~~~ 441 (515)
|..+. .....++.++. .+. .+|||++.+|..+...-| .+.+.++-.. +++.- -.+
T Consensus 280 ------~~~~~----~~~ai~~Al~~~Agi~------~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v-~s~ 342 (421)
T PTZ00050 280 ------PDGRG----ARRCMENALKDGANIN------INDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYV-SST 342 (421)
T ss_pred ------CChHH----HHHHHHHHHHhccCCC------hhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceE-ECc
Confidence 00000 00112344443 233 389999999998874443 4445555321 22211 123
Q ss_pred cccccccccchHHHHHHHH---HHcCCCC--------------------------CCCEEEEEEEChhHhhhheeeE
Q 010193 442 LHRFGNTSSSSIWYELAYI---EAKGRMC--------------------------RGHRVWQIAFGSGFKCNSAVWQ 489 (515)
Q Consensus 442 l~r~GNtsSaSi~~~La~~---~~~g~i~--------------------------~GD~VlliafGsG~~~~sav~r 489 (515)
=..+||+.+++-.++|... +++|.+- +=.+++..+||-|-.-.++|++
T Consensus 343 K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 343 KGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred cccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 3458999999888777653 3343321 1146777888888777777776
No 94
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.79 E-value=9.6e-07 Score=93.80 Aligned_cols=205 Identities=15% Similarity=0.093 Sum_probs=124.4
Q ss_pred CChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC--------------c-cCC-
Q 010193 221 PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN--------------W-YFG- 284 (515)
Q Consensus 221 Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~--------------~-~~~- 284 (515)
+..+..|+..||++ -+++.+. .||++++.||..|.++|++|..+.+||+++|..+.. . .+.
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 35778899999997 3788899 599999999999999999999999999999965431 0 001
Q ss_pred CCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCCCCcccccchhHHHHhhhccc
Q 010193 285 NKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALK 364 (515)
Q Consensus 285 ~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~ 364 (515)
.+++ ..++||||+++||++.... .-++.+ .....|... ...+ +
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g---~g~~~d~~~---~~~~-~---------------------- 256 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLG---VGESSDAHH---MSAP-H---------------------- 256 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEE---EEEeCCCCC---CCCC-C----------------------
Confidence 1122 4678999999999987321 122332 211222211 0000 0
Q ss_pred ccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHHH-----HHHHcCCCchhhhhh
Q 010193 365 TNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDE-----LEKNLQLLPVHVEAS 438 (515)
Q Consensus 365 ~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~-----v~~~Lgl~~e~~~~S 438 (515)
|..+. .....++.++. .+. .+|||++..|..+...-|. +.+.++-.. .+
T Consensus 257 -----------~~~~~----~~~a~~~Al~~Agl~------~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv--- 311 (392)
T PRK09185 257 -----------PEGLG----AILAMQQALADAGLA------PADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC--- 311 (392)
T ss_pred -----------CCHHH----HHHHHHHHHHHcCCC------HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce---
Confidence 00000 00112334433 232 3899999999988764443 445554211 12
Q ss_pred ccccccccccccchHHHHHHHHH---HcCCCC------------------------CCCEEEEEEEChhHhhhheeeEe
Q 010193 439 RMTLHRFGNTSSSSIWYELAYIE---AKGRMC------------------------RGHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 439 ~~~l~r~GNtsSaSi~~~La~~~---~~g~i~------------------------~GD~VlliafGsG~~~~sav~r~ 490 (515)
-.+=..+||+.+++-.++|.... ++|.+- +-++++.-+||-|-.-.+++++.
T Consensus 312 ~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 312 SSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred eCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 12334589999998777776532 333211 13567778888887777777763
No 95
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.79 E-value=1e-06 Score=93.92 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeecC-C-----------------CCCC---------ChHHHHHHHcCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIG----ILVVNCSL-F-----------------NPTP---------SLSAMIVNKYRL 233 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID----~LI~~~s~-~-----------------~~~P---------s~a~~I~~~LGl 233 (515)
...++..|+.++|+++|+++++++ .+++.++. . ...| ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 567899999999999999876543 24444321 1 0011 245788999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------ccC----------CCCccccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN----------WYF----------GNKKSMLIPN 293 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~----------~~~----------~~dr~~lv~~ 293 (515)
+ -+++-++ .+|++++.||..|.++|+.|. +.+||.++|..... ... +-|+.. ..
T Consensus 151 ~--Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~--~G 224 (399)
T cd00832 151 R--GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA--AG 224 (399)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--CC
Confidence 7 5778888 599999999999999999999 99999999873210 000 001110 24
Q ss_pred cccccccEEEEEecCCc
Q 010193 294 CLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 294 ~lfgDGAaA~LLs~~~~ 310 (515)
.+.|+||++++|++.+.
T Consensus 225 ~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 225 YVPGEGGAILVLEDAAA 241 (399)
T ss_pred EeeeceEEEEEEeeHHH
Confidence 67899999999997654
No 96
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.79 E-value=8.2e-07 Score=97.73 Aligned_cols=120 Identities=12% Similarity=0.135 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcC--------CcCEEEEeecC-C------------------CC------CC-ChHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPK--------DIGILVVNCSL-F------------------NP------TP-SLSAMIVNK 230 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~--------dID~LI~~~s~-~------------------~~------~P-s~a~~I~~~ 230 (515)
...++..|++++|+++|++++ .++ |++.++. . .+ .+ ..+.+|+..
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 557889999999999998764 233 4444321 0 00 11 235678999
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-cCC----c-----c-----------CCCCccc
Q 010193 231 YRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQN----W-----Y-----------FGNKKSM 289 (515)
Q Consensus 231 LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~-S~~----~-----~-----------~~~dr~~ 289 (515)
+|++ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|.. +.. + . .+-|+..
T Consensus 278 ~gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 5788899 599999999999999999999999999999962 210 0 0 0111110
Q ss_pred cccccccccccEEEEEecCCc
Q 010193 290 LIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 290 lv~~~lfgDGAaA~LLs~~~~ 310 (515)
...++|+||+++||++.+.
T Consensus 355 --dGfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 --DGFVMGEGAGVLLLEELEH 373 (540)
T ss_pred --CCcccccceEEEEEeeHHH
Confidence 2467899999999997543
No 97
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.78 E-value=9e-07 Score=94.46 Aligned_cols=187 Identities=10% Similarity=0.145 Sum_probs=112.0
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceeecCCCccC-CCCCCcHHHHHHHH
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEETYFPEAMHA-IPPKPSMAAAREEA 185 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~-~~~~~~~~~~~~ea 185 (515)
++|.|.|+|+.-|- -.+.+++.+.+.. |. +.+-. -++..+...+.....+... ..............
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~-G~sgi~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLRE-GRSGITFSP------EFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHc-CCCceeECC------cccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 47999999999998 4677888776532 10 00000 0111222222111100000 00000000111235
Q ss_pred HHHHHHHHHHHHHhCCCCcCC-----cCEEEEeecCC------------------C--------CCC-ChHHHHHHHcCC
Q 010193 186 EQVMYGALDNLFSNTNVNPKD-----IGILVVNCSLF------------------N--------PTP-SLSAMIVNKYRL 233 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~d-----ID~LI~~~s~~------------------~--------~~P-s~a~~I~~~LGl 233 (515)
..++..|++++|+++|+++++ +++++-.+... . ..| ..+..|...||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 678899999999999987543 44444332110 0 111 256789999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCcc---------------------CCCCcccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWY---------------------FGNKKSMLIP 292 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~---------------------~~~dr~~lv~ 292 (515)
+ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..++ .+-|+.. .
T Consensus 152 ~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~ 226 (406)
T PRK07967 152 K--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR--D 226 (406)
T ss_pred C--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--C
Confidence 7 4777889 59999999999999999999999999999987543110 0001110 2
Q ss_pred ccccccccEEEEEecCCc
Q 010193 293 NCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 293 ~~lfgDGAaA~LLs~~~~ 310 (515)
..+.|+||+++||++.+.
T Consensus 227 G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred ceeeeceEEEEEEeeHHH
Confidence 457799999999997543
No 98
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.71 E-value=7.3e-08 Score=102.54 Aligned_cols=94 Identities=15% Similarity=0.201 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeecC-C-CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSN-TNVNPKDIGILVVNCSL-F-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~-agi~p~dID~LI~~~s~-~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
+.+|+..|++++|+| +|++|++||.+|+.|.. . ...+..+..+....|++.+++++.++ +.|++++.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 689999999999997 49999999999998753 2 22377888999999999789999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 99
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.70 E-value=5e-08 Score=104.74 Aligned_cols=94 Identities=15% Similarity=0.222 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCC-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|++||.+|+++..... .+.++.+++..+|++..++++.++ ++|++++.|+..|..++++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999999753222 355667799999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999885
No 100
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.70 E-value=2e-06 Score=92.11 Aligned_cols=186 Identities=10% Similarity=0.034 Sum_probs=113.1
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCcee--ecCCCccCCCCCCcHHHHH--
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEET--YFPEAMHAIPPKPSMAAAR-- 182 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~~~~~~~~~~~~~~-- 182 (515)
++|.|+|+|+..|- -.+.++|.+.+.. |+ +.+-.. .-.++.++..+. .++.+ .. +..+-++.+
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~-~d--~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLDD----PFVEEFDLPVRIGGHLLEE-FD--HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCCh----hhhhccCCCcceEEEeccC-cc--ccCCHHHHhhc
Confidence 57999999999998 4678888877643 11 110000 001112222221 11111 10 001112222
Q ss_pred HHHHHHHHHHHHHHHHhCCC---CcCCcCEEEEeecCCC-------------------------CCC-ChHHHHHHHcCC
Q 010193 183 EEAEQVMYGALDNLFSNTNV---NPKDIGILVVNCSLFN-------------------------PTP-SLSAMIVNKYRL 233 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi---~p~dID~LI~~~s~~~-------------------------~~P-s~a~~I~~~LGl 233 (515)
.....++..|+.++|+++|+ +++++++++-.+.... ..| ..+..|...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23566889999999999995 5566666554332110 012 245667888888
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcC-C----c------cC-----CC------Cccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQ-N----W------YF-----GN------KKSMLI 291 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~-~----~------~~-----~~------dr~~lv 291 (515)
+ -.++.+. .+|++++.||..|.++|+.|..+.++|.++|.... . + .. .. |+..
T Consensus 161 ~--G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 K--AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 7 3567778 59999999999999999999999999999997421 0 0 10 00 1110
Q ss_pred cccccccccEEEEEecCCc
Q 010193 292 PNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 292 ~~~lfgDGAaA~LLs~~~~ 310 (515)
...++|+|++++||++.+.
T Consensus 236 ~G~v~gEGaa~vvLe~~~~ 254 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEH 254 (418)
T ss_pred CCEeeeceEEEEEEeeHHH
Confidence 3567899999999997653
No 101
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.70 E-value=5.3e-08 Score=103.31 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CC--CCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FN--PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~--~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
..+|+.+|++++|+++|++++|||.+|++++. .. ..+..+..+...+|++ .+++++++ ++|++++.||.+|..++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987642 21 1111122334456776 78899999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCc
Q 010193 262 QVNWNTYAVVVSTENIT 278 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S 278 (515)
++|..+++||++.|..|
T Consensus 100 ~sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 100 EAGRARIVLVVGAEKMT 116 (389)
T ss_pred HCCCCCEEEEEEehhhc
Confidence 99999999999999865
No 102
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=7.7e-08 Score=102.61 Aligned_cols=93 Identities=10% Similarity=0.193 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhC-CCCcCCcCEEEEeec-CC-CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNT-NVNPKDIGILVVNCS-LF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
..+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++ .+|+++..++..|.+++
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 5889999999999996 999999999998753 22 22356678899999996 68999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999998765
No 103
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=8.1e-08 Score=102.38 Aligned_cols=90 Identities=18% Similarity=0.168 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCC-----CChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPT-----PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAK 258 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~-----Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~ 258 (515)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. ++++++++ .+|++++.+|..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHH
Confidence 5889999999999999999999999998854 33222 22223222 2443 46799999 59999999999999
Q ss_pred HHHhcCCCCeEEEEEeccCc
Q 010193 259 DLLQVNWNTYAVVVSTENIT 278 (515)
Q Consensus 259 ~lL~sg~~~~aLVVs~E~~S 278 (515)
.++++|..++|||+++|..|
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHHcCCCCEEEEEEEEecC
Confidence 99999999999999999865
No 104
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.2e-07 Score=100.43 Aligned_cols=94 Identities=11% Similarity=0.210 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCC-CChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPT-PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+|+.+|++++|+++|++|+|||.+|+.+.. .... ...+..+....|++.+++++.++ ++|++|+.|+.+|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 68999999999999999999999999998753 2222 33556777789998679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 105
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.64 E-value=1.3e-07 Score=100.78 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeecCC--CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSN-TNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~-agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
+.+|+.+|++++|++ +|++|++||.+|+.+... ...+..+..++...|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 689999999999996 699999999999986532 22356677799999998779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999986
No 106
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.63 E-value=1.6e-07 Score=100.07 Aligned_cols=94 Identities=12% Similarity=0.180 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CC-CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+|+.+|++++|+++|++|+|||.+|+++. +. ...+..+..++...|++..++++.++ ++|++|+.|+..|...++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 22 22355677788999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999885
No 107
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=1.9e-07 Score=99.00 Aligned_cols=94 Identities=14% Similarity=0.238 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+..++..+|++.+++.+.++ .+|++++.++..|...+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999987642 122334567789999997568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898774
No 108
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.60 E-value=1.9e-07 Score=99.40 Aligned_cols=94 Identities=12% Similarity=0.188 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeecC--CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSN-TNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~-agi~p~dID~LI~~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
+.+|+.+|++++|++ +|++|+|||.+|+.+.. ....+..+..++..+|++.+++++.++ ++|++|+.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 689999999999996 69999999999998643 222366777899999998779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999985
No 109
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.59 E-value=1.5e-07 Score=93.16 Aligned_cols=120 Identities=19% Similarity=0.300 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCC------cCEEEEeecCCC-----------------C------CC-ChHHHHHHHcCC
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKD------IGILVVNCSLFN-----------------P------TP-SLSAMIVNKYRL 233 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~d------ID~LI~~~s~~~-----------------~------~P-s~a~~I~~~LGl 233 (515)
....++..|+.+||+++|+++++ +.+++-++..++ + .| ..+..|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 47788999999999999999853 444443332210 1 22 247789999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEec-cCcCC---------ccCCC------Cccccccccccc
Q 010193 234 RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTE-NITQN---------WYFGN------KKSMLIPNCLFR 297 (515)
Q Consensus 234 ~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E-~~S~~---------~~~~~------dr~~lv~~~lfg 297 (515)
+ -+++-+++ +|++++.||+.|.++|++|..+.+||.++| .++.. ....+ |+.. ...++|
T Consensus 166 ~--G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 R--GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp ---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred C--Cccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 7 46777884 999999999999999999999999999999 44431 11111 1111 347899
Q ss_pred cccEEEEEecC
Q 010193 298 VGCSAVLLSNK 308 (515)
Q Consensus 298 DGAaA~LLs~~ 308 (515)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999864
No 110
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.58 E-value=1.9e-07 Score=100.32 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++|++||.+|+.+.. ....+.++..++-..|++..++++.++ ++|++|+.|+.+|.+++++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999998653 222344666666668998789999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 111
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.54 E-value=4e-07 Score=96.60 Aligned_cols=94 Identities=14% Similarity=0.244 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecC-CCC-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+.+|+.+|++.+|+++|++|+|||.+|+.+.. ... .+..+..+.-.-|++.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 68999999999999999999999999998653 221 244554444445886689999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010193 263 VNWNTYAVVVSTENITQ 279 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S~ 279 (515)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999885
No 112
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.53 E-value=4e-07 Score=96.93 Aligned_cols=93 Identities=19% Similarity=0.188 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCC-CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+++++... +........+.+.+|++ .++++.+. ++|++++.++..|...+++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 578999999999999999999999999876422 21122235688899997 58899999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||++.|..|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998753
No 113
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.51 E-value=3.9e-07 Score=96.64 Aligned_cols=94 Identities=11% Similarity=0.143 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeecCC-CC-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSN-TNVNPKDIGILVVNCSLF-NP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~-agi~p~dID~LI~~~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
+++|+..+++++|++ +|++|+|||.+|+++... .. .+..+..+....|++.+++++.++ ++|++|+.|+.+|..++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 688999999999997 699999999999987542 22 244566688889998679999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999875
No 114
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=1.3e-05 Score=84.90 Aligned_cols=89 Identities=10% Similarity=0.162 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHhCC-CCc-CCcCEEEEeecC-CCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTN-VNP-KDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~ag-i~p-~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
..+|+.+|++++|+++| +++ +|||.+++++.. +.........++..+|+. ..+.+.+ |+++..++..|...+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 57899999999999999 998 799999875421 111111223466889984 2344444 778999999999999
Q ss_pred hcCCCCeEEEEEeccCc
Q 010193 262 QVNWNTYAVVVSTENIT 278 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S 278 (515)
++|..++|||++.|..+
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999998643
No 115
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.49 E-value=4.1e-06 Score=87.42 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHhCCC--CcCCcCEEEEeecCC-----------------CCCC---------ChHHHHHHHcCCCCC
Q 010193 185 AEQVMYGALDNLFSNTNV--NPKDIGILVVNCSLF-----------------NPTP---------SLSAMIVNKYRLRGN 236 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi--~p~dID~LI~~~s~~-----------------~~~P---------s~a~~I~~~LGl~~~ 236 (515)
...++..|++++++++|+ +++++++++-.+... ...| ..+..|...+|++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~-- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK-- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--
Confidence 567888999999999995 677887777553211 0011 2567788899997
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----c-----c-----C-------CCCcccccccc
Q 010193 237 IRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----W-----Y-----F-------GNKKSMLIPNC 294 (515)
Q Consensus 237 ~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~-----~-----~-----~-------~~dr~~lv~~~ 294 (515)
-+++-++ .+|++++.||..|.++|+.|..+.+||.++|..... | . . +-|+.. ...
T Consensus 82 Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G~ 158 (342)
T PRK14691 82 GPIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DGF 158 (342)
T ss_pred CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CCc
Confidence 5778888 599999999999999999999999999999873210 0 0 0 001110 246
Q ss_pred ccccccEEEEEecCCc
Q 010193 295 LFRVGCSAVLLSNKRK 310 (515)
Q Consensus 295 lfgDGAaA~LLs~~~~ 310 (515)
++||||+++||++...
T Consensus 159 v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 159 VMGEGAGLLIIEELEH 174 (342)
T ss_pred cccceEEEEEEeeHHH
Confidence 7899999999997653
No 116
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.49 E-value=9.1e-06 Score=86.55 Aligned_cols=183 Identities=14% Similarity=0.081 Sum_probs=112.4
Q ss_pred CCCeEEEEeeEecCCCCceecHHHHHHHhhh--cC-CCChhhHHHHHHHHHHhCC-CceeecCCCccCCCCCCcHHHHHH
Q 010193 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKL--TG-DFDESSLEFQRKILERSGL-GEETYFPEAMHAIPPKPSMAAARE 183 (515)
Q Consensus 108 ~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~--~~-~~~~~~~~f~~~i~~~sGI-~~r~~~~~~~~~~~~~~~~~~~~~ 183 (515)
+++|.|.|+|+--|- -.+.+++.+.+.. .+ .++... |- . ...+. ++- ....+ .+..... ....
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~G~sg~~~~~~~--~~--~-~~~~~~~~~---~~~~~-~~~~~~~-r~~~ 71 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSAGRPQPNVDTET--FA--P-YPVHPLPEI---DWSQQ-IPKRGDQ-RQME 71 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHcCCCCCCCCccc--cc--C-cCccccccc---Chhhc-CCchhhh-hccC
Confidence 567999999999988 4777888876642 11 111110 00 0 00000 000 00000 0110000 1112
Q ss_pred HHHHHHHHHHHHHHHhCCCCc-----CCcCEEEEeecCC--C---------------------------CCC--------
Q 010193 184 EAEQVMYGALDNLFSNTNVNP-----KDIGILVVNCSLF--N---------------------------PTP-------- 221 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p-----~dID~LI~~~s~~--~---------------------------~~P-------- 221 (515)
....++..|++++|+++|+++ +++++++-.+... . ..|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 366789999999999999854 3455555443211 0 012
Q ss_pred -ChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CcC---------CccC------C
Q 010193 222 -SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQ---------NWYF------G 284 (515)
Q Consensus 222 -s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~-~S~---------~~~~------~ 284 (515)
..+..|...+|++ -+++-++ .+|++++.||..|.++|+.|..+.+||.++|. ++. .... .
T Consensus 152 n~~a~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 2466788899997 4788899 59999999999999999999999999999986 221 0110 0
Q ss_pred C-----CccccccccccccccEEEEEecCCc
Q 010193 285 N-----KKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 285 ~-----dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
. +|+ ..+.|+||++++|++.+.
T Consensus 229 ~d~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 229 WSRGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred hccCccCCC----CeeeeceEEEEEEeeHHH
Confidence 1 122 467899999999997654
No 117
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.48 E-value=5.9e-07 Score=96.55 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCC-CCCCChHH-HHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSA-MIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~-~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..+|+.+|+++||+++|++++|||.+|+++... ...+.++. .++..+|++ .++++.+. .+|+++..+|..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 478999999999999999999999988776332 22223333 467999998 58999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010193 263 VNWNTYAVVVSTENIT 278 (515)
Q Consensus 263 sg~~~~aLVVs~E~~S 278 (515)
+|..+.|||+++|..|
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999765
No 118
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.47 E-value=7.7e-07 Score=95.78 Aligned_cols=94 Identities=22% Similarity=0.244 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCC--cCEEEEeecC--C-CCCCChHHHHHHHcCCC------CCeeEEEecCCcchHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKD--IGILVVNCSL--F-NPTPSLSAMIVNKYRLR------GNIRSYNLGGMGCSAGVIA 253 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~d--ID~LI~~~s~--~-~~~Ps~a~~I~~~LGl~------~~~~~~dl~g~gCsggl~a 253 (515)
..+|+.+|++++|+++|++|+| ||.+|+++.. . ...+..+..++..+|++ ..++++.++ .+|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 6889999999999999999999 9999987642 1 12355566677565554 378899999 599999999
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccCcC
Q 010193 254 VDLAKDLLQVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 254 l~lA~~lL~sg~~~~aLVVs~E~~S~ 279 (515)
+..|...+++|..+.+||+++|.+|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999998775
No 119
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.43 E-value=6.1e-07 Score=95.10 Aligned_cols=94 Identities=12% Similarity=0.133 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeecCC-CC-CCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSN-TNVNPKDIGILVVNCSLF-NP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~-agi~p~dID~LI~~~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
+.+|+.+|++++|++ +|++|++||.+|+++... .. .+..+..+.-..|++..++++.++ .+|++++.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 689999999999997 599999999999987532 21 234556666678888779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010193 262 QVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~ 279 (515)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999875
No 120
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.39 E-value=1.5e-06 Score=93.23 Aligned_cols=94 Identities=17% Similarity=0.239 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCC-CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..+.-..|++..++++.++ ++|++++.++..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999987432 11244556655566676568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 121
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.36 E-value=1e-05 Score=81.33 Aligned_cols=117 Identities=16% Similarity=0.243 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
-..|..+|++.+|+|++++++|||.++-.--....++ ++..++.|++ +.+.+.| +||.+.-+|.+|.-++..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCC
Confidence 4567889999999999999999999997754444433 5788899886 4999997 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---Ccc-C---CCCccccccccccccccEEEEEecCCc
Q 010193 265 WNTYAVVVSTENITQ---NWY-F---GNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~---~~~-~---~~dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
-.+++|+.++-.... .|. + +..|.. +...---||+|+||++...
T Consensus 124 ~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 124 FADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp S-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--
T ss_pred CcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCC
Confidence 889999888765442 221 1 234431 2334456999999998765
No 122
>PRK07937 lipid-transfer protein; Provisional
Probab=98.28 E-value=8.5e-05 Score=77.93 Aligned_cols=88 Identities=13% Similarity=0.038 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCC--CChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPT--PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~--Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
.+|+.+|++++|+++|++++|||.++.+++ +... ......+...+|+.+......+. +++..++..|...+++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 689999999999999999999998864433 2111 11123455677874344555555 2477799999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010193 264 NWNTYAVVVSTENIT 278 (515)
Q Consensus 264 g~~~~aLVVs~E~~S 278 (515)
|..++|||++.|..+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999654
No 123
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.28 E-value=4.3e-05 Score=96.84 Aligned_cols=252 Identities=15% Similarity=0.167 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHhCCCC----cCCcCEEEEeecCCC------------------------------------------
Q 010193 185 AEQVMYGALDNLFSNTNVN----PKDIGILVVNCSLFN------------------------------------------ 218 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~----p~dID~LI~~~s~~~------------------------------------------ 218 (515)
...++.+++.++|+++|+. .+.+++++-++...+
T Consensus 93 qqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (2582)
T TIGR02813 93 SQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHW 172 (2582)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccccc
Confidence 5568899999999999984 345655554332100
Q ss_pred ---CCC-----ChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-cCCc--------
Q 010193 219 ---PTP-----SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQNW-------- 281 (515)
Q Consensus 219 ---~~P-----s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~-S~~~-------- 281 (515)
..| .++.+|.++||++ -+++-+. .+|++++.||++|.+.|+.|..+.+|+.+++.. +...
T Consensus 173 ~~~~~~g~~~n~~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~ 249 (2582)
T TIGR02813 173 EENSFPGSLGNVISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTP 249 (2582)
T ss_pred CccccccccccHHHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhcc
Confidence 011 2478899999997 4788899 599999999999999999999999999888763 2110
Q ss_pred -cC-------CCCccccccccccccccEEEEEecCCcccccccceeeeEEEE-EeccCcccccceeeccCCCCCcccccc
Q 010193 282 -YF-------GNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRT-HKGADDKAFRCVYQEQDDQGKTGVSLS 352 (515)
Q Consensus 282 -~~-------~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t-~~~~d~~~~~~~~~~ed~~g~~g~~ls 352 (515)
+. .+.+. ...+.|+|+++++|.+-....+ .+=++..+++. ...+|++. ..++.+
T Consensus 250 ~lS~~g~crpFD~~a---dG~v~GEGag~vvLkrL~dA~~-dGd~IyAvI~G~g~~~DG~~-~~itaP------------ 312 (2582)
T TIGR02813 250 AFTTNEDIQPFDIDS---KGMMIGEGIGMMALKRLEDAER-DGDRIYAVIKGVGASSDGKF-KSIYAP------------ 312 (2582)
T ss_pred CcCCCCCccCCCCCC---CcccccceEEEEEeCcHHHHHh-CCCcEEEEEEEEEEcCCCCC-CCCcCC------------
Confidence 00 11111 2467899999999987543211 11123233222 22222211 111110
Q ss_pred hhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCHHHHH-----HHHH
Q 010193 353 KELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVID-----ELEK 426 (515)
Q Consensus 353 ~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~-----~v~~ 426 (515)
...+ | .. ..++.++. ++. .+||+++..|-.|..+-| .+.+
T Consensus 313 ----~~~g-------------------q----~~-~i~~Al~~Agi~------p~~I~yIeaHGTGT~~gD~~E~~Al~~ 358 (2582)
T TIGR02813 313 ----RPEG-------------------Q----AK-ALKRAYDDAGFA------PHTCGLIEAHGTGTAAGDVAEFGGLVS 358 (2582)
T ss_pred ----CHHH-------------------H----HH-HHHHHHHHcCCC------HHHCCEEEecCCCCCCCCHHHHHHHHH
Confidence 0000 1 00 11333332 233 379999999998776544 4455
Q ss_pred HcCCCc---hhhhhhccccccccccccchHHHHHHHH---HHcCCCC--------------------------------C
Q 010193 427 NLQLLP---VHVEASRMTLHRFGNTSSSSIWYELAYI---EAKGRMC--------------------------------R 468 (515)
Q Consensus 427 ~Lgl~~---e~~~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~i~--------------------------------~ 468 (515)
.++-.. ..+.- -.+=..+||+-+++-...|... ++.|.+- .
T Consensus 359 vf~~~~~~~~~~~v-gSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~ 437 (2582)
T TIGR02813 359 VFSQDNDQKQHIAL-GSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQRED 437 (2582)
T ss_pred HhcccccCCCCcee-eccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCC
Confidence 665321 11210 1233468999999888777643 3332210 1
Q ss_pred C--CEEEEEEEChhHhhhheeeEee
Q 010193 469 G--HRVWQIAFGSGFKCNSAVWQAL 491 (515)
Q Consensus 469 G--D~VlliafGsG~~~~sav~r~~ 491 (515)
| .++..-+||-|-+...++++-.
T Consensus 438 ~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 438 GTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred CCccEEEEeCccCCCeeEEEEEeec
Confidence 1 3567788998888888888864
No 124
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.12 E-value=1.1e-05 Score=85.63 Aligned_cols=88 Identities=11% Similarity=0.035 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
..+|+.+|++++|+++|++++|||.++.++.. .+.....++..+|++ ..+..++. .||+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999998753221 111124589999997 57888888 59999999999999999999
Q ss_pred CCCeEEEEEeccC
Q 010193 265 WNTYAVVVSTENI 277 (515)
Q Consensus 265 ~~~~aLVVs~E~~ 277 (515)
..+.||||+.|..
T Consensus 100 ~~d~vLvvg~e~~ 112 (388)
T PRK08142 100 KCSVALITLAGRP 112 (388)
T ss_pred CCCEEEEEeeeec
Confidence 9999999999964
No 125
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.04 E-value=0.00031 Score=74.95 Aligned_cols=122 Identities=14% Similarity=0.191 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-cCCcC--EEE-EeecC---CC------------------------CCC-ChHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVN-PKDIG--ILV-VNCSL---FN------------------------PTP-SLSAMIVNK 230 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~-p~dID--~LI-~~~s~---~~------------------------~~P-s~a~~I~~~ 230 (515)
.....++..|+++|++++|++ ..+++ +-+ +.++. .. ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 447889999999999999997 33443 322 22221 10 122 245678888
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-Cc--------------CC-------ccCC-CCc
Q 010193 231 YRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-IT--------------QN-------WYFG-NKK 287 (515)
Q Consensus 231 LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~-~S--------------~~-------~~~~-~dr 287 (515)
+|++ -+.+.++ .+|+++..||..|.++|+.|..+.+++.++|. ++ .. +.+. .+|
T Consensus 149 ~g~~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLK--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCC--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 9987 5788899 49999999999999999999999999999976 32 11 1111 234
Q ss_pred cccccccccccccEEEEEecCCcc
Q 010193 288 SMLIPNCLFRVGCSAVLLSNKRKD 311 (515)
Q Consensus 288 ~~lv~~~lfgDGAaA~LLs~~~~~ 311 (515)
+ ..++|.||+++||+..+..
T Consensus 226 d----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred C----CEEEecceeEEEecChhhH
Confidence 4 4688999999999987643
No 126
>PRK07855 lipid-transfer protein; Provisional
Probab=97.97 E-value=2.8e-05 Score=82.53 Aligned_cols=85 Identities=13% Similarity=0.086 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
..+|+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++-....++. .||+++..++..|...+++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 47899999999999999999999999874421 1222 4688999997424456888 59999999999999999999
Q ss_pred CCCeEEEEEe
Q 010193 265 WNTYAVVVST 274 (515)
Q Consensus 265 ~~~~aLVVs~ 274 (515)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 127
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.96 E-value=0.00015 Score=73.03 Aligned_cols=95 Identities=18% Similarity=0.283 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHH-HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVN-KYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~-~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
.-+|...+.+..+++++++|+.|+-+++.+...--.-...++++. .-|++..++..-++ -.|++|+.|+.....-+++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhc
Confidence 456788899999999999999999999986432112244455544 45888777777777 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcCC
Q 010193 264 NWNTYAVVVSTENITQN 280 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~~ 280 (515)
|.+.-.|-.+.|.+|.+
T Consensus 140 G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTN 156 (435)
T ss_pred Cceeeecccchhhhccc
Confidence 99889999999998875
No 128
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.59 E-value=0.0022 Score=76.33 Aligned_cols=188 Identities=14% Similarity=0.153 Sum_probs=116.0
Q ss_pred CCeEEEEeeEecCCCCceecHHHHHHHhhhc----CCCChhhHHHHHHHHHHhCCC-----ceeecC------------C
Q 010193 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLT----GDFDESSLEFQRKILERSGLG-----EETYFP------------E 167 (515)
Q Consensus 109 ~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~----~~~~~~~~~f~~~i~~~sGI~-----~r~~~~------------~ 167 (515)
.+|=|+|++|.+|. .-+.++|.+.+..- ..++++. |=.+..+-. .++|.. +
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 34899999999999 45678888776531 1123331 112222221 111111 1
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCE----EEEee-cCCCCCC-------------------Ch
Q 010193 168 AMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGI----LVVNC-SLFNPTP-------------------SL 223 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~~~-s~~~~~P-------------------s~ 223 (515)
..+.++| +.+++.+--..|..+.+-++|+++|+.|+.+.. |..+. ..+|... -.
T Consensus 76 ~fFgisP--rEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~ 153 (1061)
T COG3321 76 LFFGISP--REAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVA 153 (1061)
T ss_pred HHcCCCH--HHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHH
Confidence 1111111 111222223447899999999999999998883 55443 3344322 15
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcC--Ccc--------CCCCc--c--c
Q 010193 224 SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQ--NWY--------FGNKK--S--M 289 (515)
Q Consensus 224 a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~--~~~--------~~~dr--~--~ 289 (515)
+.+|...|+++ -+++.+. .+||+.+.|+++|.+.|+.|....||+=+....-. .++ ..+.+ . .
T Consensus 154 a~Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~ 230 (1061)
T COG3321 154 AGRISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDA 230 (1061)
T ss_pred HHHHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceeccc
Confidence 77899999997 6889999 69999999999999999999988888776655321 111 11100 0 0
Q ss_pred cccccccccccEEEEEecCC
Q 010193 290 LIPNCLFRVGCSAVLLSNKR 309 (515)
Q Consensus 290 lv~~~lfgDGAaA~LLs~~~ 309 (515)
--..++.|.|+++++|.+-.
T Consensus 231 ~adG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 231 DADGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCCCEEEeeeEEEEEEEEhH
Confidence 01245789999999998654
No 129
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.55 E-value=0.00028 Score=75.08 Aligned_cols=95 Identities=17% Similarity=0.298 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhC--CCCcCCcCEEEEeecCC--CCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNT--NVNPKDIGILVVNCSLF--NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (515)
Q Consensus 185 a~~la~~Aa~~aL~~a--gi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~l 260 (515)
.+++.....+..+++. ++++.+||-+|..|... ...+..+..++...|++.+++.+.++ .+|++++.++.+|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 5666666666666544 78888999999987432 34667888999999998779999999 6999999999999999
Q ss_pred HhcCCCCeEEEEEeccCcCC
Q 010193 261 LQVNWNTYAVVVSTENITQN 280 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~ 280 (515)
+++|..+.+|+++.|.+|..
T Consensus 106 I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999873
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.32 E-value=0.00057 Score=69.12 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
+.+|+.-|++.+|+|++++|+|++-+|+.+. +-+.--..+.+.+=--||+-++.+.-++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 7889999999999999999999999998853 3333333355565566788889999999 8999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+-++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 131
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.03 E-value=0.00044 Score=70.18 Aligned_cols=60 Identities=23% Similarity=0.314 Sum_probs=44.5
Q ss_pred hhhhhccccccccccccchHHHHHHHHH--HcCCCCCCCEEEEEEEChhHhhhheeeEeecc
Q 010193 434 HVEASRMTLHRFGNTSSSSIWYELAYIE--AKGRMCRGHRVWQIAFGSGFKCNSAVWQALQN 493 (515)
Q Consensus 434 ~~~~S~~~l~r~GNtsSaSi~~~La~~~--~~g~i~~GD~VlliafGsG~~~~sav~r~~~~ 493 (515)
+++||...-.+.||+.++|++..|+-++ ..+..-.|+||.|.++|||........+....
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TT
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCC
Confidence 6677777778899999999999999988 34444579999999999997666666655543
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.92 E-value=0.0013 Score=65.07 Aligned_cols=89 Identities=15% Similarity=0.248 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
.|++.+|+.++|++++++-++|+--++.-. .+. ....+-.-++||. .++.||+++ .|+.|-.||-+|++++++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 467889999999999999999887655422 111 1123445588997 799999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC
Q 010193 265 WNTYAVVVSTENITQ 279 (515)
Q Consensus 265 ~~~~aLVVs~E~~S~ 279 (515)
....+|..+-|.+++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999875
No 133
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.60 E-value=0.093 Score=54.34 Aligned_cols=120 Identities=13% Similarity=0.180 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcC---Cc-----CEEEEeecC---------------------CCCCC----C-hHHHHHH
Q 010193 184 EAEQVMYGALDNLFSNTNVNPK---DI-----GILVVNCSL---------------------FNPTP----S-LSAMIVN 229 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~---dI-----D~LI~~~s~---------------------~~~~P----s-~a~~I~~ 229 (515)
....++..|++++|+++++-+. +. +++|-.+-. .+..| . -+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4788999999999999997765 22 233322210 01233 2 2578999
Q ss_pred HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----c---------c-CC--------CC
Q 010193 230 KYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----W---------Y-FG--------NK 286 (515)
Q Consensus 230 ~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~-----~---------~-~~--------~d 286 (515)
+||++ .+.+.++ .+|+.+..+|.-|.++|+.|..+..|-=++|.+-.. | . ++ .+
T Consensus 173 ~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 99997 5788899 799999999999999999998777777777764210 0 0 01 12
Q ss_pred ccccccccccccccEEEEEecCCc
Q 010193 287 KSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 287 r~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
|+ ..++|.|++.++|+.-+.
T Consensus 250 Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 250 RD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CC----ceeeccceeEEehHhHHH
Confidence 33 467899999999986553
No 134
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.51 E-value=0.038 Score=45.90 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=47.0
Q ss_pred HHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEE---ecCCcchHHHHHHHHHHHHHhcCCCCeEEEEE
Q 010193 197 FSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVS 273 (515)
Q Consensus 197 L~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~al~lA~~lL~sg~~~~aLVVs 273 (515)
|+++|++++|||.+|.... .......+.+++|++++....+ .++++|++-..+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999998752 2344566899999985544333 34466777777766655422334678888887
Q ss_pred ecc
Q 010193 274 TEN 276 (515)
Q Consensus 274 ~E~ 276 (515)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 543
No 135
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.51 E-value=0.07 Score=52.91 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee----cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNC----SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~----s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~l 260 (515)
+.++..-|++.+|+.+++.++.+|.+|+.. |.+-. -++..|--+.|.+.+.+++.++ -=|.++..++--+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 678899999999999999999999999863 33311 1122233344455678899999 6999999999999998
Q ss_pred HhcCCCCeEEEEEeccCcC
Q 010193 261 LQVNWNTYAVVVSTENITQ 279 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~ 279 (515)
+..+..+-+|--++|++|+
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9898888999999999986
No 136
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=94.25 E-value=0.13 Score=55.20 Aligned_cols=91 Identities=13% Similarity=0.237 Sum_probs=64.7
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHHH
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDLL 261 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~lL 261 (515)
..|++++|+++|++++|||.+.++-. .....-...+++|++. ..+|++|- |++|....+.+..+|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999987621 1233456778889863 45677763 7888888888888887
Q ss_pred hcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 262 QVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
+.+ .++.|+ +.|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 445432 2355666677788775
No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.64 E-value=0.33 Score=51.46 Aligned_cols=89 Identities=16% Similarity=0.152 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHc-----CCCCCee---EEEecCCcchHHHHHHH
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY-----RLRGNIR---SYNLGGMGCSAGVIAVD 255 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~L-----Gl~~~~~---~~dl~g~gCsggl~al~ 255 (515)
...+...++++++|+++|++++|||.++.... .+.+-..++++| |++++-. .-.+++++|++...+|.
T Consensus 269 ~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 269 NIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHH
Confidence 34556688999999999999999999996642 244456777776 7764321 22566677888888887
Q ss_pred HHHHHHhcCCCCeEEEEEecc
Q 010193 256 LAKDLLQVNWNTYAVVVSTEN 276 (515)
Q Consensus 256 lA~~lL~sg~~~~aLVVs~E~ 276 (515)
.|..-=+-.+++++++++.|.
T Consensus 345 ~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 345 ELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHcCCCCCCCEEEEEEecc
Confidence 663311123578898888775
No 138
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.49 E-value=0.26 Score=51.60 Aligned_cols=83 Identities=12% Similarity=0.100 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE-----EEecCCcchHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----YNLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~g~gCsggl~al~lA~~ 259 (515)
....+..+++++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+++++++++...+|.-+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3444568899999999999999999998642 23355668999999743222 26777888888888876654
Q ss_pred HHhcCCCCeEEEEE
Q 010193 260 LLQVNWNTYAVVVS 273 (515)
Q Consensus 260 lL~sg~~~~aLVVs 273 (515)
.+ .+++++|+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 22 2344555544
No 139
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.03 E-value=0.26 Score=50.77 Aligned_cols=87 Identities=14% Similarity=0.183 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHH
Q 010193 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS---YNLGGMGCSAGVIAVDLA 257 (515)
Q Consensus 181 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~al~lA 257 (515)
..+.+.+...++++++|+++|++++|||.++.... .+.+-..+.++||++++-.. -+.+++++++...+|+.+
T Consensus 221 ~~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~ 296 (326)
T PRK05963 221 VFTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH
Confidence 34456667788999999999999999999887532 24556778999999744332 233445555555555433
Q ss_pred HHHHhcC---CCCeEEEEEe
Q 010193 258 KDLLQVN---WNTYAVVVST 274 (515)
Q Consensus 258 ~~lL~sg---~~~~aLVVs~ 274 (515)
++.+ +++++|+++.
T Consensus 297 ---~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 ---NLEQPLREGERLLFAAA 313 (326)
T ss_pred ---HHhCCCCCCCEEEEEEE
Confidence 3332 4577887774
No 140
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.97 E-value=0.34 Score=50.11 Aligned_cols=90 Identities=9% Similarity=0.114 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEE---ecCCcchHHHHHHHH
Q 010193 180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDL 256 (515)
Q Consensus 180 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~al~l 256 (515)
+..++......++++++|+++|++++|||.+++... .+..-..+.++||++++-...+ .+++++++...+|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~ 307 (338)
T PRK09258 232 GLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAM 307 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHH
Confidence 334455666778899999999999999999887642 2345568999999974333222 455555555555554
Q ss_pred HHHHHhcC---CCCeEEEEEecc
Q 010193 257 AKDLLQVN---WNTYAVVVSTEN 276 (515)
Q Consensus 257 A~~lL~sg---~~~~aLVVs~E~ 276 (515)
+ ++.+ +++++|+++...
T Consensus 308 ~---~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 308 A---AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred H---HHhCCCCCCCEEEEEEech
Confidence 4 3332 467888877553
No 141
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=92.91 E-value=0.084 Score=53.05 Aligned_cols=94 Identities=12% Similarity=0.150 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
+.+++.+|...+|+++.++.+.||.||+.+. ...-+-.++..-+-.-|.+..+++.-+. |+|-+.-.|+...-.|+.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 6788999999999999999999999999985 3455555665555556787778888899 9999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010193 264 NWNTYAVVVSTENITQ 279 (515)
Q Consensus 264 g~~~~aLVVs~E~~S~ 279 (515)
|..+.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 8777666667888875
No 142
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.25 E-value=0.55 Score=48.20 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS---YNLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~al~lA~~ 259 (515)
+++.+...++++++|+++|++++|||.++... +.+.+...++++||++.+-.. -++++++|++...+|..+
T Consensus 221 ~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 294 (325)
T PRK12879 221 KWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA-- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH--
Confidence 34455567889999999999999999999774 234556789999999743222 234445566666565433
Q ss_pred HHhcC---CCCeEEEEEe
Q 010193 260 LLQVN---WNTYAVVVST 274 (515)
Q Consensus 260 lL~sg---~~~~aLVVs~ 274 (515)
++.+ +++++|+++.
T Consensus 295 -~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 -LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 4543 3567776664
No 143
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=91.97 E-value=3 Score=40.93 Aligned_cols=114 Identities=11% Similarity=-0.029 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCC----------------CCCC-h--------HHHHHHHcCCCCCeeE
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN----------------PTPS-L--------SAMIVNKYRLRGNIRS 239 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~----------------~~Ps-~--------a~~I~~~LGl~~~~~~ 239 (515)
...|++.++.+++++. +++|.+|++|..+. ..|. + +.++.-..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 6788899999888653 57889999875321 3441 2 2223333333 4567
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCc
Q 010193 240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 240 ~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
.-+. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|.....+ .....--|.|++|+++..
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 7788 47789999999999999999 89999999999766445432111 112233677888886553
No 144
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.94 E-value=0.58 Score=48.26 Aligned_cols=84 Identities=12% Similarity=0.123 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~ 259 (515)
+.+.....++++++|+++|++++|||.++..... ...-..++++||++++.... +.++++|++...+|+.
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---
Confidence 3455667788999999999999999999976421 12356889999997543332 3343444444444443
Q ss_pred HHhcC---CCCeEEEEE
Q 010193 260 LLQVN---WNTYAVVVS 273 (515)
Q Consensus 260 lL~sg---~~~~aLVVs 273 (515)
+++.+ +++++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 34443 356777665
No 145
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.89 E-value=0.59 Score=47.88 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCC---CCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLR---GNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+...++++++|+++|++++|||.++... +......-........++.+ .....-+++++++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 3455789999999999999999999874 33222222233344444431 0112236677788888888888877766
Q ss_pred cC
Q 010193 263 VN 264 (515)
Q Consensus 263 sg 264 (515)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 54
No 146
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=91.74 E-value=0.52 Score=48.30 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEE---ecCCcchHHHHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~al~lA~~ 259 (515)
++..+...++++++|+++|++++|||.+++... .+..-..++++||++.+-...+ +++++|++-+.+|.-+
T Consensus 215 ~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~-- 288 (318)
T TIGR00747 215 KHAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL-- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH--
Confidence 344555777899999999999999999996542 3445678999999974322222 3345555555555443
Q ss_pred HHhcC---CCCeEEEEEe
Q 010193 260 LLQVN---WNTYAVVVST 274 (515)
Q Consensus 260 lL~sg---~~~~aLVVs~ 274 (515)
++.+ +++++|+++.
T Consensus 289 -~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 -LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 3567776663
No 147
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.71 E-value=0.44 Score=48.82 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~ 259 (515)
+.......++++++|+++|++++|||.++.... .+..-.++..++|++.+-... +.++++|+..+..|. +
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~ 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---E 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---H
Confidence 344555778999999999999999999987632 345567789999997433222 234445555555554 3
Q ss_pred HHhcC---CCCeEEEEEe
Q 010193 260 LLQVN---WNTYAVVVST 274 (515)
Q Consensus 260 lL~sg---~~~~aLVVs~ 274 (515)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 33433 3567776664
No 148
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=90.80 E-value=0.66 Score=49.13 Aligned_cols=84 Identities=10% Similarity=0.143 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS---YNLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~al~lA~~ 259 (515)
+.+.....++++++|+++|++++|||.++.... -+.+-..++++||++++-.. -+.+++++++...+|+-+
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~-- 349 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA-- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH--
Confidence 344555667899999999999999999887643 23344668999999754322 245556666666666544
Q ss_pred HHhcC---CCCeEEEEE
Q 010193 260 LLQVN---WNTYAVVVS 273 (515)
Q Consensus 260 lL~sg---~~~~aLVVs 273 (515)
++.+ +++++|+++
T Consensus 350 -~~~g~~~~Gd~vll~~ 365 (379)
T PLN02326 350 -VRSGKVKKGDVIATAG 365 (379)
T ss_pred -HHcCCCCCCCEEEEEE
Confidence 3333 456676665
No 149
>PRK04262 hypothetical protein; Provisional
Probab=90.78 E-value=0.51 Score=49.26 Aligned_cols=68 Identities=10% Similarity=0.178 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE-----EEecCCcchHHHHHHHHHH
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----YNLGGMGCSAGVIAVDLAK 258 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~g~gCsggl~al~lA~ 258 (515)
....++++++|+++|++++|||.+++.. +.+.+-..++++||++++-.. -..+++++++-..+|.-+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 4567789999999999999999988763 223455678999999743222 2556666666666665554
No 150
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=90.45 E-value=0.84 Score=46.57 Aligned_cols=86 Identities=14% Similarity=0.205 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEE---ecCCcchHHHHHHHHHH
Q 010193 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDLAK 258 (515)
Q Consensus 182 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~al~lA~ 258 (515)
.+...+...++++++|+++|++++|||.++.... .+..-..+.+++|++++-...+ .+++++++.+.+|.-+
T Consensus 218 ~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~- 292 (320)
T cd00830 218 FKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA- 292 (320)
T ss_pred HHHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH-
Confidence 3445667788999999999999999999887642 2445567899999974332222 3344555555555443
Q ss_pred HHHhcC---CCCeEEEEEe
Q 010193 259 DLLQVN---WNTYAVVVST 274 (515)
Q Consensus 259 ~lL~sg---~~~~aLVVs~ 274 (515)
++.+ +++++|+++.
T Consensus 293 --~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 --IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred --HHcCCCCCCCEEEEEEE
Confidence 3333 5678888774
No 151
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=90.44 E-value=0.96 Score=48.44 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=58.9
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHHH
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDLL 261 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~lL 261 (515)
..|++++|+++|++|+|||++-.+- ......-...+.||+.++-..+|.+|. |++|...-++++.+|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 6789999999999999999988541 112233455677887433456777652 3445555566666664
Q ss_pred hcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 262 QVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 262 ~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
.. ..++.|+ +.|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 32 2345443 2355566677777764
No 152
>PRK06840 hypothetical protein; Validated
Probab=90.21 E-value=0.85 Score=47.26 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCee--EEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR--SYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
....++++++|+++|++++|||.++.... .+.+-..++++||++++-. .-+.++++|++.+.+|..+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 34568999999999999999999875431 2344567899999974321 1144445555555555433 4443
Q ss_pred ---CCCeEEEEEe
Q 010193 265 ---WNTYAVVVST 274 (515)
Q Consensus 265 ---~~~~aLVVs~ 274 (515)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566666663
No 153
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=90.10 E-value=1.2 Score=43.59 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCC---CCeeEEEecCCcchHHHHHHHHHHHHHh
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLR---GNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+...++++++|+++|++++|||.++... .................+.. .....-.+++++|++++..+..+..-++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 3456789999999999999999988763 33322222222222333331 0112234555666777766666655555
Q ss_pred cC
Q 010193 263 VN 264 (515)
Q Consensus 263 sg 264 (515)
.+
T Consensus 225 ~~ 226 (254)
T cd00327 225 HE 226 (254)
T ss_pred CC
Confidence 44
No 154
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=90.03 E-value=1.1 Score=47.94 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++-++- ..+...-+..+.||+.++-..+|.+|- |++|....++++.+|
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL 374 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL 374 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence 35789999999999999999987541 122333455678888533456777762 334444555666666
Q ss_pred HhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
-.. ..++.|+ +.|.-|-.++|+|+++
T Consensus 375 r~~-~~~~g~~--------------------~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 375 ERT-GGRYALC--------------------TMCIGVGQGIALAIER 400 (401)
T ss_pred Hhc-CCCeEEE--------------------EEcccccceeEEEEEe
Confidence 432 2334333 3355565666677764
No 155
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=89.39 E-value=1.3 Score=45.83 Aligned_cols=82 Identities=12% Similarity=0.121 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHHHh
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~lL~ 262 (515)
......+++++|+++|++++|||.+++.... +.....++++||++++-... +.++++|++...+|+-+ ++
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 3456678899999999999999999877432 34556789999997443222 34445566666666544 34
Q ss_pred cC---CCCeEEEEEe
Q 010193 263 VN---WNTYAVVVST 274 (515)
Q Consensus 263 sg---~~~~aLVVs~ 274 (515)
.+ +++++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 33 4567777663
No 156
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.00 E-value=1.1 Score=47.13 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHH-cCCCC-Cee----EEEecCCcchHHHHHHH
Q 010193 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNK-YRLRG-NIR----SYNLGGMGCSAGVIAVD 255 (515)
Q Consensus 182 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~-LGl~~-~~~----~~dl~g~gCsggl~al~ 255 (515)
.+++.+.+.++++++|+++|++++|||.++..... +.+-..+.++ ||+.. .-+ --..++++|++...+|+
T Consensus 266 ~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~ 341 (372)
T PRK07515 266 FKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFH 341 (372)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHH
Confidence 35667778899999999999999999999877321 1222335566 56431 111 22556677888888887
Q ss_pred HHHHHHhcCCCCeEEEEEe
Q 010193 256 LAKDLLQVNWNTYAVVVST 274 (515)
Q Consensus 256 lA~~lL~sg~~~~aLVVs~ 274 (515)
.+.+-+ .+++++|+++.
T Consensus 342 ~~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 342 KHSDDL--AAGDLGVICSF 358 (372)
T ss_pred HHhccC--CCCCEEEEEEe
Confidence 764432 34567777663
No 157
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=88.92 E-value=2.9 Score=44.60 Aligned_cols=58 Identities=12% Similarity=-0.037 Sum_probs=43.8
Q ss_pred ccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchH---HHHHHHHHHc
Q 010193 405 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSI---WYELAYIEAK 463 (515)
Q Consensus 405 ~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi---~~~La~~~~~ 463 (515)
.+|||.+=+|-.-....-...+.||+.++++.+| --+--+||...++- ...|.+.+++
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 3899999999998888788889999998888654 23344788886666 6666666554
No 158
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=88.90 E-value=1.2 Score=47.69 Aligned_cols=77 Identities=14% Similarity=0.205 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++-++- ..+...-+..+.||+.++-..+|.+|- |++|....++++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 35789999999999999999987441 122334456678898544456777752 344555556666666
Q ss_pred HhcCCCCeEE
Q 010193 261 LQVNWNTYAV 270 (515)
Q Consensus 261 L~sg~~~~aL 270 (515)
-.. ..++.|
T Consensus 374 r~~-~~~~g~ 382 (400)
T TIGR02430 374 ERS-GGRYAL 382 (400)
T ss_pred Hhc-CCCEEE
Confidence 432 234444
No 159
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=88.30 E-value=2.8 Score=44.92 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=39.0
Q ss_pred ccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHH
Q 010193 405 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYI 460 (515)
Q Consensus 405 ~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~ 460 (515)
.+|||.|-+|-.-....-...+.||++++++.++ -..--+||...++-...+.++
T Consensus 317 ~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~~l 371 (402)
T PRK08242 317 VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILGTV 371 (402)
T ss_pred HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHHHH
Confidence 3899999999888777777889999998888653 233346777666555444443
No 160
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=87.57 E-value=2.9 Score=44.81 Aligned_cols=83 Identities=11% Similarity=-0.046 Sum_probs=50.7
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEEChhHhhh
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQ-IAFGSGFKCN 484 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vll-iafGsG~~~~ 484 (515)
+|||.+=+|-......-...+.||+.++.+.+| -..--+||...++-...+.++..+=+-++|-..+. +..|.|. -.
T Consensus 321 ~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~-g~ 398 (406)
T PRK07851 321 DDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQ-GM 398 (406)
T ss_pred HHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccCh-hh
Confidence 789998777665554445568899987766543 33444899988887777776655322234444443 3334443 34
Q ss_pred heeeEe
Q 010193 485 SAVWQA 490 (515)
Q Consensus 485 sav~r~ 490 (515)
+++++.
T Consensus 399 a~~~e~ 404 (406)
T PRK07851 399 AMVLER 404 (406)
T ss_pred EEEEEe
Confidence 566654
No 161
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=87.31 E-value=2 Score=46.06 Aligned_cols=92 Identities=15% Similarity=0.220 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++-.+= ......-...+.||+.. ..+|.+| .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 46899999999999999999987441 11223344557788752 2344443 1455555556666665
Q ss_pred HhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
-+.+ .++.|+ +.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGMV--------------------TMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 4432 234332 3455666777777764
No 162
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=87.06 E-value=2.8 Score=44.80 Aligned_cols=82 Identities=16% Similarity=0.039 Sum_probs=53.0
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEEChhHhhh
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQ-IAFGSGFKCN 484 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vll-iafGsG~~~~ 484 (515)
+|||.+=+|-.-....-...+.||+.++++.++ -..--+||...++-...+.++..+=+-+.|++.+. +..|.|. -.
T Consensus 309 ~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~-g~ 386 (393)
T PRK08235 309 EDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQ-GD 386 (393)
T ss_pred HHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-eE
Confidence 899999888777666667789999988887653 23344788888776666666554322245566443 3444453 34
Q ss_pred heeeE
Q 010193 485 SAVWQ 489 (515)
Q Consensus 485 sav~r 489 (515)
+++|+
T Consensus 387 a~~~e 391 (393)
T PRK08235 387 AVLIE 391 (393)
T ss_pred EEEEE
Confidence 55554
No 163
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=86.61 E-value=4.5 Score=43.12 Aligned_cols=83 Identities=8% Similarity=-0.052 Sum_probs=51.9
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEEChhHhhh
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQ-IAFGSGFKCN 484 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vll-iafGsG~~~~ 484 (515)
+|||.+=+|-.-....-...+.+|++.+.+.++ --+--+||...++-...+.++..+=+-+.|...+. +..|.|.. .
T Consensus 303 ~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g-~ 380 (387)
T PRK07850 303 GDIDLVEINEAFASVVLSWAQVHEPDMDKVNVN-GGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALS-T 380 (387)
T ss_pred HHcCeeeecccchHHHHHHHHHcCCCCCCcCCC-CchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCce-e
Confidence 899999999988777667778999988777653 23444899887776666665544322123333332 34444432 4
Q ss_pred heeeEe
Q 010193 485 SAVWQA 490 (515)
Q Consensus 485 sav~r~ 490 (515)
+++++.
T Consensus 381 a~~~e~ 386 (387)
T PRK07850 381 GTIIER 386 (387)
T ss_pred EEEEEe
Confidence 555553
No 164
>PRK09051 beta-ketothiolase; Provisional
Probab=86.57 E-value=2.7 Score=44.85 Aligned_cols=92 Identities=16% Similarity=0.254 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++=++- ..+...-+..+.||+. ...+|.+|- |++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~--~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLD--PAKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCC--ccccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 36789999999999999999987752 1233445567888985 246666652 233444444555554
Q ss_pred HhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
-+.+ .++.|+ +.|.-|-.++|+||++
T Consensus 368 ~~~~-~~~g~~--------------------~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 368 QRIG-GRYALV--------------------TMCIGGGQGIAAIFER 393 (394)
T ss_pred HhcC-CCEEEE--------------------EEccccChhhEEEEEe
Confidence 4322 233322 3455666677777765
No 165
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=86.38 E-value=1.4 Score=46.14 Aligned_cols=87 Identities=9% Similarity=0.110 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCC-Cee----EEEecCCcchHHHHHHHHHHHHHh
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG-NIR----SYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~-~~~----~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
..++++++|+++|++|+|||.|+.. +...+-....+..+.+-+|-.. ..+ .-.++..+.++|...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999866 4332222222333444454311 111 112332334444444444445555
Q ss_pred cC--CCCeEEEEEec
Q 010193 263 VN--WNTYAVVVSTE 275 (515)
Q Consensus 263 sg--~~~~aLVVs~E 275 (515)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 55 46789988854
No 166
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=86.09 E-value=3.3 Score=44.25 Aligned_cols=54 Identities=7% Similarity=-0.128 Sum_probs=36.5
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYI 460 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~ 460 (515)
+|||.+-+|-......-...+.||+.++++.++ -..--+||...++=...+..+
T Consensus 308 ~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 308 DDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHH
Confidence 899999888665444445578899988888653 334447888777655544444
No 167
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=85.22 E-value=3.7 Score=43.37 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHH
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKD 259 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~ 259 (515)
-...|++++|+++|++|+|||.+..+-. .........+.||+.+ ..+|.+| .|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 3567999999999999999999977521 2233445667888853 2444441 367777777777777
Q ss_pred HHhc
Q 010193 260 LLQV 263 (515)
Q Consensus 260 lL~s 263 (515)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7654
No 168
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=85.04 E-value=1.8 Score=46.25 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG 244 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 244 (515)
...|++++|+++|++|+|||++-++-. .+...-+..+.||+.. ..+|++|
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCCC--ccCCcCC
Confidence 357999999999999999999887521 2233345567788742 2445553
No 169
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=84.91 E-value=5.7 Score=42.55 Aligned_cols=84 Identities=12% Similarity=0.028 Sum_probs=49.5
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCc---hhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEE-EEEEChhH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLP---VHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVW-QIAFGSGF 481 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~---e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vl-liafGsG~ 481 (515)
+|||.+-+|-.-....-...+.||+.+ +++.++ -..--+||...++-...+.++..+=+-+.|.+.+ .+..|.|.
T Consensus 316 ~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg~ 394 (404)
T PRK06205 316 DDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQ 394 (404)
T ss_pred HHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCh
Confidence 899999999887776677788899876 355432 2233478887776555555544321112334433 33444443
Q ss_pred hhhheeeEee
Q 010193 482 KCNSAVWQAL 491 (515)
Q Consensus 482 ~~~sav~r~~ 491 (515)
-.+++++.+
T Consensus 395 -g~a~~~e~~ 403 (404)
T PRK06205 395 -GLAAVFERV 403 (404)
T ss_pred -hhEEEEEec
Confidence 345666554
No 170
>PLN02287 3-ketoacyl-CoA thiolase
Probab=84.90 E-value=3.2 Score=45.17 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++=++ .......-+-.+.||+.+ ..+|++| .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999654 011112223346777642 3455443 2566666666666666
Q ss_pred HhcCC-CCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCc
Q 010193 261 LQVNW-NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 261 L~sg~-~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~ 310 (515)
-+.+. .++.| .+.|.-|--++|+||++.+.
T Consensus 407 ~~~~~~~~~gl--------------------~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGV--------------------VSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeE--------------------EEEccccCceeEEEEEecCc
Confidence 54331 03333 24566777788899998664
No 171
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=84.55 E-value=2.5 Score=45.10 Aligned_cols=92 Identities=18% Similarity=0.342 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++-++-. .+...-+-.+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNEA----FASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCH----HHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 468999999999999999999986521 1222233345777642 2344443 2556666666667676
Q ss_pred HhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
-+.+ .++.|+ +.|.-|..+.|+||++
T Consensus 365 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFGIV--------------------TMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeEEE--------------------EEccccChhhEEEEEe
Confidence 5533 234332 3455666677777764
No 172
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=84.18 E-value=3 Score=44.53 Aligned_cols=67 Identities=19% Similarity=0.275 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++=++- ..+...-+..+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999987663 12333455667788753 2455554 3667777777777777
Q ss_pred H
Q 010193 261 L 261 (515)
Q Consensus 261 L 261 (515)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 173
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=83.88 E-value=3.9 Score=43.19 Aligned_cols=94 Identities=13% Similarity=0.169 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC-----CCeeEE-EecCCcchHHHHHHHHHHH
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR-----GNIRSY-NLGGMGCSAGVIAVDLAKD 259 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~-----~~~~~~-dl~g~gCsggl~al~lA~~ 259 (515)
..-...|+++++++.|.+|+|.|.+++.. |.|-+...++..++.+ +..... .++++.|.+...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 34466789999999999999999999875 4455666677776654 444444 68888898888554 444
Q ss_pred HHhcC-CCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 260 LLQVN-WNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 260 lL~sg-~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
|=++. +++++|+++ ||.||+|-..|-
T Consensus 282 L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~ 308 (377)
T COG3425 282 LDNAKLPGDRILLFS----------------------YGSGAGSEAFSI 308 (377)
T ss_pred HhhcCCCCCEEEEEe----------------------eCCCcceeEEEE
Confidence 44444 566777655 577888866653
No 174
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=83.56 E-value=6.3 Score=41.98 Aligned_cols=95 Identities=9% Similarity=0.015 Sum_probs=53.9
Q ss_pred HHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCC
Q 010193 389 IKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMC 467 (515)
Q Consensus 389 ~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~ 467 (515)
.++++++ .+. .+|||.+=+|-.-....-...|.||++.+++.+|=- +--+||-..+|=...+.++..+=+-+
T Consensus 291 ~~~al~~Agl~------~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG-~la~GHP~GatG~~~~~~l~~qL~~~ 363 (388)
T PRK06366 291 TRKLLEKQNKS------IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGG-AVAIGHPIGNSGSRIIVTLINALKTR 363 (388)
T ss_pred HHHHHHHcCCC------HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCc-hhhhCCCcCCCHHHHHHHHHHHHHhc
Confidence 3556654 343 389999999999888777888999999888876522 22256654444333333332211102
Q ss_pred CCCE-EEEEEEChhHhhhheeeEee
Q 010193 468 RGHR-VWQIAFGSGFKCNSAVWQAL 491 (515)
Q Consensus 468 ~GD~-VlliafGsG~~~~sav~r~~ 491 (515)
.|.. +..+..|.|. -.+++++.+
T Consensus 364 ~~~~g~~~~c~~gg~-g~a~~~e~~ 387 (388)
T PRK06366 364 HMKTGLATLCHGGGG-AHTLTLEMV 387 (388)
T ss_pred CCCeEEEEEecccCh-hhEEEEEec
Confidence 2223 3334444443 346666654
No 175
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=83.53 E-value=2.7 Score=37.49 Aligned_cols=75 Identities=20% Similarity=0.331 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++++|||.+=++=. .-...-...+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 457999999999999999999987721 1122345667778753 4555554 3677778888888887
Q ss_pred HhcCCCCeEE
Q 010193 261 LQVNWNTYAV 270 (515)
Q Consensus 261 L~sg~~~~aL 270 (515)
-+.+ .++.+
T Consensus 98 ~~~~-~~~gl 106 (123)
T PF02803_consen 98 RRRG-GRYGL 106 (123)
T ss_dssp HHHT-TSEEE
T ss_pred HHhc-hhhhh
Confidence 6643 34443
No 176
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=83.24 E-value=2.1 Score=44.56 Aligned_cols=88 Identities=17% Similarity=0.223 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCee--EEEecCCcchHHHHHHHHH
Q 010193 180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR--SYNLGGMGCSAGVIAVDLA 257 (515)
Q Consensus 180 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~g~gCsggl~al~lA 257 (515)
+-.+.+..++.++++++|++++++++|||.+|..- .-..+-..++++||++++-. .++-.| ..++..+-|.+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHH
Confidence 45667999999999999999999999999998653 23445678999999965433 333343 444444444444
Q ss_pred HHHHhcCC---CCeEEEEE
Q 010193 258 KDLLQVNW---NTYAVVVS 273 (515)
Q Consensus 258 ~~lL~sg~---~~~aLVVs 273 (515)
.. ++.++ +.++|+++
T Consensus 291 ~~-~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 EA-LREGRIKPGDLVLLEA 308 (323)
T ss_pred HH-hhhCCCCCCCEEEEEe
Confidence 33 33332 34555443
No 177
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=83.18 E-value=1.7 Score=46.48 Aligned_cols=92 Identities=17% Similarity=0.246 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++=.+-. .....-+-.+.||+.+ ..+|++| .|++|....++++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d~----fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINEA----FAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhhH----HHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 367999999999999999999854310 1111122336678752 3455554 2445555555555555
Q ss_pred HhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEec
Q 010193 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~ 307 (515)
-..+ .++. +.+.|.-|..++|+||++
T Consensus 371 ~~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 371 RARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred HhcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 4322 2232 224566677777777764
No 178
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=83.16 E-value=9.6 Score=40.59 Aligned_cols=54 Identities=19% Similarity=0.011 Sum_probs=36.4
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCc---hhhhhhccccccccccccchHHHHHHHH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLP---VHVEASRMTLHRFGNTSSSSIWYELAYI 460 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~---e~~~~S~~~l~r~GNtsSaSi~~~La~~ 460 (515)
+|||.+=+|-.-....-...+.||+-+ +.+.++ --+--+||...++=...+..+
T Consensus 300 ~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~GhP~GAtG~~~v~~l 356 (387)
T PRK08947 300 SDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGARISTTL 356 (387)
T ss_pred HHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHHHHHHHH
Confidence 899999999998888888889999843 466543 223336776555544433333
No 179
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=83.01 E-value=2.7 Score=44.04 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCe------eEEEecCCcchHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNT--NVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI------RSYNLGGMGCSAGVIAV 254 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~a--gi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~------~~~dl~g~gCsggl~al 254 (515)
+.+.....++++++|+++ |++++|||.+++.... +.+-..+.++||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 445666778899999999 9999999999877531 23445689999997432 12356667777777777
Q ss_pred HHHHHHHhcCCCCeEEEEEe
Q 010193 255 DLAKDLLQVNWNTYAVVVST 274 (515)
Q Consensus 255 ~lA~~lL~sg~~~~aLVVs~ 274 (515)
+-+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76643111124567777663
No 180
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=82.26 E-value=8.3 Score=41.64 Aligned_cols=84 Identities=10% Similarity=-0.095 Sum_probs=47.9
Q ss_pred cccCEEEeccCCHHHHHHHHHHcC-----------------CCchhhhhhccccccccccccchHHHHHHHHHHcCCCCC
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQ-----------------LLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCR 468 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~ 468 (515)
+|||.+-+|-.-....-...+.|+ ++.+.+.++ --+--+||...++-...+.++..+=+-+.
T Consensus 327 ~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~~~qLrg~~ 405 (428)
T PRK08963 327 ADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQTLHELRRRG 405 (428)
T ss_pred HHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHHHHhhcC
Confidence 899999999987655444445552 444455432 12233788776666666665554322246
Q ss_pred CCEEEEEEEChhHhhhheeeEe
Q 010193 469 GHRVWQIAFGSGFKCNSAVWQA 490 (515)
Q Consensus 469 GD~VlliafGsG~~~~sav~r~ 490 (515)
|++.+...-+.|-...+++++.
T Consensus 406 g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 406 GGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCEEEEEEccccChhhEEEEEe
Confidence 6776654444443445666653
No 181
>PLN03169 chalcone synthase family protein; Provisional
Probab=80.32 E-value=5.1 Score=42.72 Aligned_cols=88 Identities=13% Similarity=0.185 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE------EEecCCcchHHHHHHHHH
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS------YNLGGMGCSAGVIAVDLA 257 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gCsggl~al~lA 257 (515)
.+.......++++|+++|++++|||.+.+...+.+ +.+-..++++||++++-.. -+.+++++++...+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 45555667789999999999999994433322222 4566778999999754322 366778888888888765
Q ss_pred HHH--Hh-cCCCCeEEEEE
Q 010193 258 KDL--LQ-VNWNTYAVVVS 273 (515)
Q Consensus 258 ~~l--L~-sg~~~~aLVVs 273 (515)
..- ++ ..+++++|+++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 421 21 11345666655
No 182
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=79.95 E-value=21 Score=37.95 Aligned_cols=81 Identities=15% Similarity=-0.013 Sum_probs=47.5
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCc---hhhhhhccccccccccccc---hHHHHHHHHHHcCCCCCCCEEEEEEECh
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLP---VHVEASRMTLHRFGNTSSS---SIWYELAYIEAKGRMCRGHRVWQIAFGS 479 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~---e~~~~S~~~l~r~GNtsSa---Si~~~La~~~~~g~i~~GD~VlliafGs 479 (515)
+|||.+=+|-.-....-...+.||+-+ +++.+|=- +--+||...+ .+...|.+.+.+ +.+.+.+....|.
T Consensus 298 ~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG-~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~g 373 (385)
T TIGR02445 298 SDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCIG 373 (385)
T ss_pred HHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEecc
Confidence 899999999998877778889999843 56655422 2235665444 444455544433 3344444433333
Q ss_pred hHhhhheeeEe
Q 010193 480 GFKCNSAVWQA 490 (515)
Q Consensus 480 G~~~~sav~r~ 490 (515)
|-.-.+++++.
T Consensus 374 ~g~g~a~~~e~ 384 (385)
T TIGR02445 374 LGQGIATVFER 384 (385)
T ss_pred cChhheEEEEe
Confidence 33335566654
No 183
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=78.50 E-value=6.8 Score=38.46 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC-ChHHHHHHHcCCCCCeeEEEecC
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-SLSAMIVNKYRLRGNIRSYNLGG 244 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g 244 (515)
.+.....++++|+++|++++|+|.|++++.|+..+- -+..-++.-|.+.-+++.+.++.
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 455677889999999999999999999998865543 34444555565555677888884
No 184
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=78.49 E-value=5.5 Score=43.95 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCC-eeEEEecCCcchH--------HHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN-IRSYNLGGMGCSA--------GVIAVDLAKD 259 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~g~gCsg--------gl~al~lA~~ 259 (515)
+..|++++++++|++|+|||++=+..+ .|...-+-.+.||+.++ -..++++| |..+ ++.++--+..
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHH
Confidence 346999999999999999999876532 24444556688998643 23567765 4432 3444443333
Q ss_pred HHhcCCCCeEEEEE
Q 010193 260 LLQVNWNTYAVVVS 273 (515)
Q Consensus 260 lL~sg~~~~aLVVs 273 (515)
-|+..+.+++||.+
T Consensus 369 QLRg~~~~~gLv~~ 382 (498)
T PRK08257 369 RLRANPGRRGLVTA 382 (498)
T ss_pred HHhhcCCCEEEEEC
Confidence 44433445565543
No 185
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=78.44 E-value=21 Score=37.89 Aligned_cols=56 Identities=13% Similarity=-0.085 Sum_probs=42.2
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCch------------------hhhhhccccccccccccchHHHHHHHHHH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLPV------------------HVEASRMTLHRFGNTSSSSIWYELAYIEA 462 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSaSi~~~La~~~~ 462 (515)
+|||.+-+|-......-...+.||+.++ .+.+|=- +--+||...++=...+.++..
T Consensus 278 ~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 278 DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 8999999999998887788899999865 3433211 334899998888877777654
No 186
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=76.49 E-value=7.1 Score=39.80 Aligned_cols=92 Identities=10% Similarity=0.076 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC-Cee------EEEecCCcchHHHHH
Q 010193 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG-NIR------SYNLGGMGCSAGVIA 253 (515)
Q Consensus 181 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~-~~~------~~dl~g~gCsggl~a 253 (515)
..+.+.....++++++|++.|++ +|||.++...... +..-..+.++++++. .+. .-++++++|+....+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 44567778889999999999999 9999887664221 156678889998741 111 224455566666666
Q ss_pred HHHHHHHHhcCCCCeEEEEEecc
Q 010193 254 VDLAKDLLQVNWNTYAVVVSTEN 276 (515)
Q Consensus 254 l~lA~~lL~sg~~~~aLVVs~E~ 276 (515)
|.-+-.--+-.+++++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 65442211112467888877543
No 187
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=76.36 E-value=8.7 Score=40.74 Aligned_cols=41 Identities=12% Similarity=0.200 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
...|++++++++|++|+|||++-.. +. +...-+..+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d~f-----~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINEAF-----AAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeechh-----HHHHHHHHHHhCCC
Confidence 3589999999999999999998754 21 12234456778875
No 188
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=76.05 E-value=5.3 Score=42.38 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHHH
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~lL 261 (515)
..|++++++++|+.|+|||++=.+= ......-+..+.||+.+ ..+|.+| .|++|...-++++.+|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999985541 11233344567788753 3566665 13344445555555554
Q ss_pred h
Q 010193 262 Q 262 (515)
Q Consensus 262 ~ 262 (515)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 4
No 189
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=76.03 E-value=6.6 Score=41.67 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeec-CCCCCCChHHHHHHHcCCCCC-----------eeEEEecCCcchHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGN-----------IRSYNLGGMGCSAG 250 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~-----------~~~~dl~g~gCsgg 250 (515)
+...+...++.+++|+++|++++|||.+++..- .-....+. ..+.++++++.+ ...=.+++++|++.
T Consensus 201 ~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~ 279 (379)
T TIGR01835 201 EQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSL 279 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHH
Confidence 345556678899999999999999999988752 11111222 235566665421 11225666677777
Q ss_pred HHHHHHH
Q 010193 251 VIAVDLA 257 (515)
Q Consensus 251 l~al~lA 257 (515)
..+|.-+
T Consensus 280 ~l~L~~~ 286 (379)
T TIGR01835 280 YLGLASL 286 (379)
T ss_pred HHHHHHH
Confidence 6666544
No 190
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=75.64 E-value=16 Score=39.11 Aligned_cols=55 Identities=13% Similarity=-0.103 Sum_probs=34.7
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCC--chhhhhhccccccccccccchHHHHHHHHH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLL--PVHVEASRMTLHRFGNTSSSSIWYELAYIE 461 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~--~e~~~~S~~~l~r~GNtsSaSi~~~La~~~ 461 (515)
+|||.+=+|-.-....-...+.||+. ..++.+| --+--+||...++-...+.++.
T Consensus 314 ~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el~ 370 (401)
T PRK08131 314 DDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTAA 370 (401)
T ss_pred HHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHHH
Confidence 89999999887765555577899985 3345432 1122378887666554444443
No 191
>PRK06059 lipid-transfer protein; Provisional
Probab=74.58 E-value=31 Score=36.70 Aligned_cols=67 Identities=13% Similarity=0.101 Sum_probs=42.7
Q ss_pred HHHHHhhh-ccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCch------------------hhhhhccccccccccc
Q 010193 389 IKKLFNRN-VKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPV------------------HVEASRMTLHRFGNTS 449 (515)
Q Consensus 389 ~~~v~~~~-~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e------------------~~~~S~~~l~r~GNts 449 (515)
.+++++.+ ++ .+|||.+-+|-.-....-...+.||+.+. .+.+| --+--+||..
T Consensus 279 ~~~a~~~agl~------~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~Ghp~ 351 (399)
T PRK06059 279 LDAAYAEAGIG------PEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPS-GGLACFGEAI 351 (399)
T ss_pred HHHHHHHcCCC------HHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCccC
Confidence 45566542 33 38999999999965555555699999853 33322 1233378888
Q ss_pred cchHHHHHHHHHH
Q 010193 450 SSSIWYELAYIEA 462 (515)
Q Consensus 450 SaSi~~~La~~~~ 462 (515)
.++-...+.++..
T Consensus 352 gatG~~~~~e~~~ 364 (399)
T PRK06059 352 PAQAIAQVCELTW 364 (399)
T ss_pred CccHHHHHHHHHH
Confidence 7777766666544
No 192
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=74.30 E-value=4.1 Score=41.96 Aligned_cols=80 Identities=23% Similarity=0.159 Sum_probs=53.5
Q ss_pred ccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccc---cccchHHHHHHHHHHcCCCCCCCE-EEEEEEChh
Q 010193 405 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGN---TSSSSIWYELAYIEAKGRMCRGHR-VWQIAFGSG 480 (515)
Q Consensus 405 ~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GN---tsSaSi~~~La~~~~~g~i~~GD~-VlliafGsG 480 (515)
.+|+|+|=++-.-..+--...|.||++|+++..- --.--.|| +|.+.+...|.+.+++ +.|.+ |--+.-|.|
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~-GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGG 386 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNVH-GGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGG 386 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCC-CceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEecCCC
Confidence 4899999888888788888899999999999531 11112455 6778899999998885 23443 333445555
Q ss_pred HhhhheeeE
Q 010193 481 FKCNSAVWQ 489 (515)
Q Consensus 481 ~~~~sav~r 489 (515)
.. .+++++
T Consensus 387 ga-sa~vie 394 (396)
T KOG1390|consen 387 GA-SAMVIE 394 (396)
T ss_pred ce-eeEEEe
Confidence 32 344444
No 193
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=73.81 E-value=24 Score=37.67 Aligned_cols=86 Identities=15% Similarity=0.054 Sum_probs=53.2
Q ss_pred HHHHHhh-hccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCch------------------hhhhhccccccccccc
Q 010193 389 IKKLFNR-NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPV------------------HVEASRMTLHRFGNTS 449 (515)
Q Consensus 389 ~~~v~~~-~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e------------------~~~~S~~~l~r~GNts 449 (515)
.++.++. +++ .+|||.+-+|-.-....-...|.||+.+. .+.+| --+--+||..
T Consensus 282 a~~a~~~Agi~------~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~-GG~la~Ghp~ 354 (403)
T PRK06289 282 VLDAYRRAGVG------LDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPS-GGLIGGGHPV 354 (403)
T ss_pred HHHHHHHcCCC------HHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCC-CCccccCCCc
Confidence 3556653 343 38999999999988888888899999763 33322 1122389988
Q ss_pred cchHHHHHHHHHHc--CC-----CCCCCEEEEEEEChhH
Q 010193 450 SSSIWYELAYIEAK--GR-----MCRGHRVWQIAFGSGF 481 (515)
Q Consensus 450 SaSi~~~La~~~~~--g~-----i~~GD~VlliafGsG~ 481 (515)
.++=...+.++..+ |+ ++..+..+..+.|.|.
T Consensus 355 gatG~~~~~e~~~QLrg~ag~~Qv~~~~~~l~~~~gg~~ 393 (403)
T PRK06289 355 GASGVRMLLDAAKQVTGTAGDYQVEGAKTFGTLNIGGST 393 (403)
T ss_pred cchHHHHHHHHHHHHhccccCccCCchheEEEEecCccc
Confidence 77766666665543 21 2222345556666543
No 194
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=73.37 E-value=16 Score=39.32 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=15.8
Q ss_pred cccccccccEEEEEecCCc
Q 010193 292 PNCLFRVGCSAVLLSNKRK 310 (515)
Q Consensus 292 ~~~lfgDGAaA~LLs~~~~ 310 (515)
.+|..+|||+|+||.+.+.
T Consensus 262 ~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 262 NSSQITDGACWLLLASEEA 280 (426)
T ss_pred ccCCCCCceEEEEEecHHH
Confidence 4688999999999997653
No 195
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=72.77 E-value=8.5 Score=40.90 Aligned_cols=48 Identities=15% Similarity=0.281 Sum_probs=32.8
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCCCeeEEEecC
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG 244 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 244 (515)
..|++++|+++|++|+|||++-+. |. +...-+..+.||+. ...+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d~f-----a~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINEAF-----AAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcchh-----HHHHHHHHHHhCCC--hhhcCCCC
Confidence 489999999999999999998544 21 22233345778874 23456654
No 196
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=72.69 E-value=19 Score=38.88 Aligned_cols=26 Identities=12% Similarity=0.185 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN 213 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~ 213 (515)
....|++++++++|++|+|||++=++
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 34569999999999999999999877
No 197
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=72.33 E-value=12 Score=39.43 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE---EE-ecCCcchHHHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS---YN-LGGMGCSAGVIAVDLAK 258 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~d-l~g~gCsggl~al~lA~ 258 (515)
+.+....-.+++++|+++|++++|||.+++... .+.+-..+.++||++++-.. ++ .++++.++...+|+-+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~- 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL- 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH-
Confidence 345566677899999999999999999998742 23456789999999853322 12 3445555555555533
Q ss_pred HHHhcCC
Q 010193 259 DLLQVNW 265 (515)
Q Consensus 259 ~lL~sg~ 265 (515)
++.++
T Consensus 313 --~~~~~ 317 (353)
T PRK12880 313 --DTPKE 317 (353)
T ss_pred --HHcCC
Confidence 44444
No 198
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=72.14 E-value=12 Score=39.20 Aligned_cols=44 Identities=9% Similarity=0.094 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~ 235 (515)
-...|++++|+++|++++|||++=++-. .+...-+..+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 3457999999999999999999877632 2333455667777754
No 199
>PRK09604 UGMP family protein; Validated
Probab=72.00 E-value=17 Score=37.91 Aligned_cols=49 Identities=8% Similarity=0.072 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC-----ChHHHHHHHcCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-----SLSAMIVNKYRL 233 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl 233 (515)
-.+.....++++|+++|++++|||.+.+++.|+..+. +.+.-++..+++
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 4566778899999999999999999999988765333 234445555554
No 200
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=70.74 E-value=1 Score=39.45 Aligned_cols=76 Identities=13% Similarity=0.202 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCC---CeeEE----EecCCcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG---NIRSY----NLGGMGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~---~~~~~----dl~g~gCsggl~al~lA~~l 260 (515)
..++++++|+++|++|+|||.|... +.+....+.-+.-+.+-|+-.. .+..- .++....++++.++-.+--.
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 4678999999999999999999876 4332222334445555555321 13322 23334667777777666666
Q ss_pred HhcC
Q 010193 261 LQVN 264 (515)
Q Consensus 261 L~sg 264 (515)
++.+
T Consensus 107 l~~~ 110 (119)
T PF02801_consen 107 LEHG 110 (119)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6654
No 201
>PRK05790 putative acyltransferase; Provisional
Probab=70.48 E-value=7.6 Score=41.31 Aligned_cols=68 Identities=16% Similarity=0.265 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 260 (515)
...|++++|+++|++|+|||++-.+-. .....-+..+.||+.. ..+|.+| .|++|....++++++|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d~----f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINEA----FAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 357899999999999999999875411 1222334567777641 2334443 2555666666777666
Q ss_pred Hh
Q 010193 261 LQ 262 (515)
Q Consensus 261 L~ 262 (515)
-.
T Consensus 367 ~~ 368 (393)
T PRK05790 367 KR 368 (393)
T ss_pred Hh
Confidence 54
No 202
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=70.41 E-value=10 Score=40.49 Aligned_cols=67 Identities=18% Similarity=0.334 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHH-HHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAM-IVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAK 258 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~ 258 (515)
...|++++|+++|++|+|||++=.+ +. +.... -.+.||++ ...+|++| .|++|....+.++.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~daf------a~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~ 363 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVNEAF------AAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIH 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhHH------HHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHH
Confidence 4678999999999999999998854 11 11111 13344543 22344443 35666677777777
Q ss_pred HHHhc
Q 010193 259 DLLQV 263 (515)
Q Consensus 259 ~lL~s 263 (515)
+|-+.
T Consensus 364 qL~~~ 368 (392)
T PRK06633 364 GLRRA 368 (392)
T ss_pred HHHhc
Confidence 77654
No 203
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=69.16 E-value=8.7 Score=36.95 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP 221 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P 221 (515)
..+.....++++|+++|++++|||.++++..|+..+.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 4556777899999999999999999999998865554
No 204
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=68.03 E-value=29 Score=37.61 Aligned_cols=56 Identities=5% Similarity=-0.123 Sum_probs=33.9
Q ss_pred cccCEEEeccCCHHHHHHHHHHcC-----------------CCchhhhhhccccccccccccchHHHHHHHHHH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQ-----------------LLPVHVEASRMTLHRFGNTSSSSIWYELAYIEA 462 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~ 462 (515)
+|||.+=+|-.-....-...+.|| ++.+++.+|= -+--+||...++-...+.++..
T Consensus 329 ~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~G-G~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 329 SDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLG-GSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCC-CHHhcCCCccccHHHHHHHHHH
Confidence 899999999987655555556664 4444554431 1223788876665555554433
No 205
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=67.64 E-value=18 Score=38.43 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCCCeeE--EEecCCcchHHHHHHHHHHHHHhcC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRGNIRS--YNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~--~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
..++++++|+++|++|+|||.+... +.+..-.+.-...|.+.+|-+..+-+ -.++...+++|+..+..+...|+.+
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 3478999999999999999998765 43322224444556666663211111 1123334455554554444445543
No 206
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=67.19 E-value=17 Score=38.57 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
...|++++|+++|++|+|||++-.. +.+ ...-+..+.||+
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl 300 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGF 300 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCC
Confidence 3478999999999999999998765 322 234456677776
No 207
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=67.01 E-value=14 Score=39.33 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCCC----------------eeEEEecC-------
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG------- 244 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g------- 244 (515)
...|++++|+++|++|+|||++=++ +- +...-+..+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d~F-----a~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Gh 345 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHDAF-----AANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGH 345 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhhh-----HHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCC
Confidence 4689999999999999999998776 31 2223344566665421 13555554
Q ss_pred -CcchHHHHHHHHHHHHHh
Q 010193 245 -MGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 245 -~gCsggl~al~lA~~lL~ 262 (515)
.||+|....++++.+|-.
T Consensus 346 P~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 346 PIGASGAAICAELCFELKG 364 (393)
T ss_pred CccccHHHHHHHHHHHHhh
Confidence 256666777777777754
No 208
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=66.55 E-value=9.3 Score=40.34 Aligned_cols=77 Identities=14% Similarity=0.093 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCC-CCeeE----EEecCCcchHHHHHHHHHHHHH
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR-GNIRS----YNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~-~~~~~----~dl~g~gCsggl~al~lA~~lL 261 (515)
-..++++++|+++|++++|||.+... +++..-.+.-+..+.+-++-+ ..+.. -.++...+++|+.++-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 35578999999999999999999876 444333344444566656542 11211 1223345666777776666667
Q ss_pred hcC
Q 010193 262 QVN 264 (515)
Q Consensus 262 ~sg 264 (515)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 665
No 209
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=66.34 E-value=11 Score=40.29 Aligned_cols=67 Identities=18% Similarity=0.221 Sum_probs=41.9
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHHH
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~lL 261 (515)
..+++++|+++|++|+|||.+=.+-. .+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEA----FSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 35999999999999999999886421 1222334556777642 2334443 25555556666666664
Q ss_pred h
Q 010193 262 Q 262 (515)
Q Consensus 262 ~ 262 (515)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 210
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=66.04 E-value=8.7 Score=38.76 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP 221 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P 221 (515)
.+.....++++|++++++++|||.+.++..|+..++
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftg 65 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTG 65 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccc
Confidence 344568899999999999999999999998865443
No 211
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=65.14 E-value=20 Score=36.83 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPT 220 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~ 220 (515)
-.+.....++++|+++|++++|||.+.++..|+..+
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~t 83 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGG 83 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchh
Confidence 445567788999999999999999999999886443
No 212
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.00 E-value=18 Score=38.76 Aligned_cols=44 Identities=9% Similarity=0.030 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
..++++++|+++|+ |+|||.|... |++..-...-+..|.+.++.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 46799999999999 8999998865 54433334445567777774
No 213
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=64.86 E-value=12 Score=33.37 Aligned_cols=83 Identities=18% Similarity=0.107 Sum_probs=49.9
Q ss_pred ccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEE-EEEEChhHhh
Q 010193 405 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVW-QIAFGSGFKC 483 (515)
Q Consensus 405 ~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vl-liafGsG~~~ 483 (515)
.+|+|.|=+|-.--...-...+.||++++++.++=-.+. +||-..+|=...+.++..+=+-+.|++.+ .+..|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g- 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG- 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE-
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhcccceee-
Confidence 389999999999998888999999999999976433333 78876666544444433321113466644 344555543
Q ss_pred hheeeE
Q 010193 484 NSAVWQ 489 (515)
Q Consensus 484 ~sav~r 489 (515)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 344443
No 214
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.84 E-value=10 Score=40.34 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
...|++++|+++|++|+|||.+-.. +.+..-.+.-...+.+-||-
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 3578999999999999999999755 44433334444456666663
No 215
>PRK14878 UGMP family protein; Provisional
Probab=64.42 E-value=13 Score=38.57 Aligned_cols=52 Identities=17% Similarity=0.159 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC-----ChHHHHHHHcCC
Q 010193 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-----SLSAMIVNKYRL 233 (515)
Q Consensus 181 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl 233 (515)
.+...+.+. .+++++|+++|++++|||.|.++..|...+. +.+..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 344555544 8999999999999999999999988764432 123344555554
No 216
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=64.40 E-value=11 Score=40.03 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
...|++++|+++|++|+|||.+... |.+..-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4578999999999999999998765 54433334445556666664
No 217
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=64.21 E-value=16 Score=38.25 Aligned_cols=46 Identities=13% Similarity=0.091 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
-...|++++|+++|++|+|||.+-.. |++..-.+.-...|.+-||-
T Consensus 207 ~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 207 GAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 36678999999999999999987754 54433345556667777773
No 218
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=63.59 E-value=12 Score=39.80 Aligned_cols=46 Identities=11% Similarity=0.105 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
+-..+|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 345678999999999999999998865 5443333444445555554
No 219
>PRK08256 lipid-transfer protein; Provisional
Probab=61.55 E-value=22 Score=37.75 Aligned_cols=69 Identities=14% Similarity=0.224 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCC----------------eeEEEecC--------
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG-------- 244 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g-------- 244 (515)
...|++++++++|++++|||++-+.-. .+...-+..+.||+.+. -..+|.+|
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d~----f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp 341 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHDC----FSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHP 341 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeeccC----CcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCC
Confidence 457999999999999999999876621 12233444566666532 12566655
Q ss_pred CcchHHHHHHHHHHHHH
Q 010193 245 MGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 245 ~gCsggl~al~lA~~lL 261 (515)
.||+|.....+++++|-
T Consensus 342 ~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 342 LGATGLAQCAELTWQLR 358 (391)
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 24455555566666654
No 220
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=61.26 E-value=22 Score=38.23 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHh-CCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 188 VMYGALDNLFSN-TNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 188 la~~Aa~~aL~~-agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
-...|++++|++ +|++|+|||.+-.. |.+..-.+.-...+.+-+|-
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 356789999999 99999999999866 54322223333456677764
No 221
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=60.60 E-value=22 Score=38.66 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~ 235 (515)
+..|++++|+++|++|+|||++=++-. .+...-+..+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~da----Fa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHDC----FTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeeccc----ChHHHHHHHHHcCCCC
Confidence 468999999999999999999877621 1233344556677653
No 222
>PRK00768 nadE NAD synthetase; Reviewed
Probab=60.13 E-value=1.9e+02 Score=29.41 Aligned_cols=149 Identities=13% Similarity=0.146 Sum_probs=75.9
Q ss_pred HHHHHHHhhhcCCCChh-----hHHHHHHHHHHhCCCceeec-CCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCC
Q 010193 129 YDKFMEHSKLTGDFDES-----SLEFQRKILERSGLGEETYF-PEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNV 202 (515)
Q Consensus 129 ~~~~~e~~~~~~~~~~~-----~~~f~~~i~~~sGI~~r~~~-~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi 202 (515)
++++++.++....++.+ -.+|++.-++++|.+.--+- ..+. +.++ +..| +.+++..-+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGGI-----DSav------~a~L----~~~A~~~~~~ 67 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGGQ-----DSTL------AGRL----AQLAVEELRA 67 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCH-----HHHH------HHHH----HHHHHHHhcc
Confidence 46677666654444543 24677777788886654331 2221 0011 2222 2334433232
Q ss_pred CcCCcCEEEEe-ecCCC--CCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHH--------HHH-----------H
Q 010193 203 NPKDIGILVVN-CSLFN--PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDL--------AKD-----------L 260 (515)
Q Consensus 203 ~p~dID~LI~~-~s~~~--~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~l--------A~~-----------l 260 (515)
+-...+..+++ +.|.. .....+..+++.+|+. +...+||. .-..++...+.- |.. +
T Consensus 68 ~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly 145 (268)
T PRK00768 68 ETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIK-PAVDASVAALEAAGIELSDFVKGNIKARERMIAQY 145 (268)
T ss_pred cccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 11112222222 44432 2245677899999984 47888988 466666554432 111 1
Q ss_pred HhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEE
Q 010193 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAV 303 (515)
Q Consensus 261 L~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~ 303 (515)
.-++ ....||++|.+.|.. +-| -.+.+|||++.+
T Consensus 146 ~~An-~~~~lvlgT~N~sE~-~~G-------y~TkyGD~~~d~ 179 (268)
T PRK00768 146 AIAG-ATGGLVVGTDHAAEA-VTG-------FFTKFGDGGADI 179 (268)
T ss_pred HHHc-cCCCEEEcCCcccHH-HhC-------ceeccCCccccc
Confidence 1122 245688887776651 111 135678888775
No 223
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=60.10 E-value=20 Score=40.07 Aligned_cols=45 Identities=7% Similarity=0.105 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
...|.+++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 4578999999999999999998754 54432233345566777763
No 224
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=59.97 E-value=25 Score=37.49 Aligned_cols=46 Identities=9% Similarity=0.142 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
....|++++|+++|++|+|||.+... +++..-...-...+.+-||.
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 34678999999999999999999876 44322122223445555653
No 225
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=59.89 E-value=20 Score=37.97 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
...|++++|+++|++|+|||++-+. +. +...-+..+.||+.
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d~f-----t~~~l~~le~lGl~ 300 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHDAF-----TIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCcC-----hHHHHHHHHHcCCC
Confidence 4579999999999999999997655 32 23344556677764
No 226
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=59.40 E-value=20 Score=35.48 Aligned_cols=87 Identities=15% Similarity=0.208 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCC-hHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPS-LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
-.+....-++.+|++++++++|||.+.+.-.|+.-.|- ..+.+++-+.+=-+.+-..++ -|-|-+ .+.+. +..
T Consensus 49 Hr~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR~-iTg 122 (336)
T KOG2708|consen 49 HRAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGRE-ITG 122 (336)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcce-ecc
Confidence 34455666788999999999999999988777766663 334455555432245566666 565533 22222 222
Q ss_pred CCCCeEEEEEeccC
Q 010193 264 NWNTYAVVVSTENI 277 (515)
Q Consensus 264 g~~~~aLVVs~E~~ 277 (515)
-.+-.+|-||+-+.
T Consensus 123 A~nPvvLYvSGGNT 136 (336)
T KOG2708|consen 123 AQNPVVLYVSGGNT 136 (336)
T ss_pred CCCCEEEEEeCCce
Confidence 23567888887763
No 227
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=59.32 E-value=27 Score=36.50 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC-ChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
.+-....++++|+++|++.+|||+|-+...|+-.-+ ......++.|-+.-+.+-+.++ -|-|=+.+-.+.... .
T Consensus 51 ~e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~~---~ 125 (342)
T COG0533 51 VENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETGL---A 125 (342)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccCC---C
Confidence 344667889999999999999999999887764222 1123334444333345677777 455544433332221 1
Q ss_pred CCCeEEEEEecc
Q 010193 265 WNTYAVVVSTEN 276 (515)
Q Consensus 265 ~~~~aLVVs~E~ 276 (515)
..--+|+||+=.
T Consensus 126 ~p~v~LlVSGGH 137 (342)
T COG0533 126 FPPVALLVSGGH 137 (342)
T ss_pred CCcEEEEEecCc
Confidence 134567777555
No 228
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=58.44 E-value=31 Score=35.64 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC-----ChHHHHHHHcCCCCCeeEEEecC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-----SLSAMIVNKYRLRGNIRSYNLGG 244 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g 244 (515)
-.+.....++++|+++|++++|||.+.++..|+..+. +.|.-++..++ ++.+.++.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 4555778899999999999999999999998875433 22333444444 44555554
No 229
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=58.33 E-value=17 Score=38.75 Aligned_cols=76 Identities=12% Similarity=0.168 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCCCeeEE----EecCCcchHHHHHHHHHHHHHh
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRGNIRSY----NLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~----dl~g~gCsggl~al~lA~~lL~ 262 (515)
-..+|++++|+++|++|+|||.|... |++..-.+.-+..|.+-||-. .++.. .++...+++++..+..+...|+
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHh
Confidence 35678999999999999999988765 544433455555677777743 22221 2232334455555544444555
Q ss_pred cC
Q 010193 263 VN 264 (515)
Q Consensus 263 sg 264 (515)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 43
No 230
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=57.67 E-value=28 Score=30.74 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=38.8
Q ss_pred HHHHHHHhCCCCcCCcCEEEEeecCC--CCCCChHHHHHHHc-CCCCCeeEEEecCCcch
Q 010193 192 ALDNLFSNTNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKY-RLRGNIRSYNLGGMGCS 248 (515)
Q Consensus 192 Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g~gCs 248 (515)
-.++.+++.+++++||--+++..++| ...| +..++++ |+. +++-++...|.=-
T Consensus 25 Ll~~ii~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~Gw~-~Vplmc~qEm~V~ 80 (117)
T TIGR01796 25 LLTELMERNELTPEDLISVIFTVTEDLHADFP---AAAARGLPGWT-DVPVMCAQEIPVE 80 (117)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEecCcccccCh---HHHHHhccCCC-CcceeccCcCCCC
Confidence 34566788999999999999987764 4456 5566677 987 7887777764433
No 231
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=56.65 E-value=18 Score=37.42 Aligned_cols=37 Identities=16% Similarity=0.112 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCC
Q 010193 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN 218 (515)
Q Consensus 181 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~ 218 (515)
.|++++.+. .+++++|+++|++++|||.|.++..|..
T Consensus 42 ~~~H~~~l~-~~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAP-KLIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 344555544 4499999999999999999999987653
No 232
>PRK07937 lipid-transfer protein; Provisional
Probab=56.45 E-value=33 Score=36.06 Aligned_cols=76 Identities=8% Similarity=-0.030 Sum_probs=45.2
Q ss_pred HHHHHHHHh-CCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCC-------cchHHHHHHHHHHHHHh
Q 010193 191 GALDNLFSN-TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM-------GCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 191 ~Aa~~aL~~-agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~-------gCsggl~al~lA~~lL~ 262 (515)
.++++++++ +|++|+|||++=+.-. .+...-+..+.||+.++ ..+|.+|- ||+|...-++++.+|..
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~D~----F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g 324 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELHAP----FTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIWD 324 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEeCC----ChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHhc
Confidence 334455555 5999999999876521 23344556788998532 35666653 45555555566666643
Q ss_pred cCCCCeEEEE
Q 010193 263 VNWNTYAVVV 272 (515)
Q Consensus 263 sg~~~~aLVV 272 (515)
. ..+++|+.
T Consensus 325 ~-~a~~~l~~ 333 (352)
T PRK07937 325 G-SARRALAH 333 (352)
T ss_pred c-CCCEEEEe
Confidence 3 24555554
No 233
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.09 E-value=18 Score=38.50 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
...+|++++|+++|++|+|||.+... |++..-.+.-...|.+-+|
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 46789999999999999999998865 5443323333445666666
No 234
>PRK07855 lipid-transfer protein; Provisional
Probab=55.63 E-value=38 Score=36.09 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=21.7
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVN 213 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~ 213 (515)
..|++++++++|++|+|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998765
No 235
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.61 E-value=25 Score=37.81 Aligned_cols=44 Identities=11% Similarity=0.163 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
..++++++|+++|++|+|||.+... |++....+.-...|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5678999999999999999999876 4433323333444555565
No 236
>PRK06158 thiolase; Provisional
Probab=54.59 E-value=36 Score=36.15 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN 213 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~ 213 (515)
...|++++++++|++|+|||++=+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~Ely 280 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELY 280 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEec
Confidence 4579999999999999999998665
No 237
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=54.11 E-value=37 Score=41.13 Aligned_cols=124 Identities=19% Similarity=0.221 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC-----EEEEeecCC-----C----------CCCChHHHHHHHcCC--CCCeeEEEe
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIG-----ILVVNCSLF-----N----------PTPSLSAMIVNKYRL--RGNIRSYNL 242 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID-----~LI~~~s~~-----~----------~~Ps~a~~I~~~LGl--~~~~~~~dl 242 (515)
-..|..+|--+++-++||+|.+.. .-|-++.+. . .+-..-+|.+|++.. .=.-++|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~ 166 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence 456788888999999999997753 333332111 1 111234677777542 112467777
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcC-----CccC-------CC----CccccccccccccccEEEEEe
Q 010193 243 GGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQ-----NWYF-------GN----KKSMLIPNCLFRVGCSAVLLS 306 (515)
Q Consensus 243 ~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~-----~~~~-------~~----dr~~lv~~~lfgDGAaA~LLs 306 (515)
. .+|++.+.+++.|.+-+++++..+|+|-+.-.+-. .|.+ |. |.+- ...-=.||.+|++|.
T Consensus 167 D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 167 D-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAVLLQ 243 (2376)
T ss_pred h-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEEEEe
Confidence 7 69999999999999999999999999988766422 1111 11 1110 123347999999999
Q ss_pred cCCcc
Q 010193 307 NKRKD 311 (515)
Q Consensus 307 ~~~~~ 311 (515)
++...
T Consensus 244 rk~~A 248 (2376)
T KOG1202|consen 244 RKSLA 248 (2376)
T ss_pred hhHHH
Confidence 87653
No 238
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.32 E-value=25 Score=37.72 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
...|++++|+++|++|+|||.+-.. |.+..-.+.-+..|.+-||
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 5678899999999999999998755 5544334555566777776
No 239
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=53.30 E-value=23 Score=38.12 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCC-C--e-eEEEecCCcchHHHHHHHHHHHHHh
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG-N--I-RSYNLGGMGCSAGVIAVDLAKDLLQ 262 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~-~--~-~~~dl~g~gCsggl~al~lA~~lL~ 262 (515)
+..|.+.||+++|++|+|||.|-.. |++..-...-+..|.+-+|=.. + + -.-.+.| -|-|..-+++.+..++.
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tG-H~lGAaGaveai~~~l~ 355 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTG-HTLGAAGAVEAIISLLA 355 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccc-cChhhHHHHHHHHHHHH
Confidence 5689999999999999999999865 6665444555555666666211 1 1 1222333 44444445555555443
No 240
>PRK08304 stage V sporulation protein AD; Validated
Probab=53.25 E-value=58 Score=34.10 Aligned_cols=87 Identities=21% Similarity=0.231 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC-------CCeeEEEec---------CCcchHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR-------GNIRSYNLG---------GMGCSAGVI 252 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~-------~~~~~~dl~---------g~gCsggl~ 252 (515)
|+..+.+=|+++|.+|+|-|+||..=-. ..--.+...+..+-|+. ..+.-||.. |-|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDlg-~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDLG-RVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcchH-HHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 4555666788999999999999976311 01112233333333431 124566632 347777776
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC
Q 010193 253 AVDLAKDLLQVNWNTYAVVVSTENI 277 (515)
Q Consensus 253 al~lA~~lL~sg~~~~aLVVs~E~~ 277 (515)
.=.+-+.| +.+..+++|+|+|=.+
T Consensus 289 ~~~~~~~~-~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 289 YGYLLKEL-QKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHHH-hcCCceEEEEEEchhh
Confidence 65555554 4567899999998763
No 241
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=51.60 E-value=58 Score=34.61 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhCCCC--cCCcCEEEEe-ecCCCCCCChHHHHHHHcCCC
Q 010193 188 VMYGALDNLFSNTNVN--PKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 188 la~~Aa~~aL~~agi~--p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
....|++++++++|++ ++|||++=+. |. +...-+..+.||+.
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~ 300 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCC
Confidence 3457999999999997 6999987664 32 22233444556654
No 242
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=50.84 E-value=37 Score=35.68 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC-----ChHHHHHHHcCCC
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-----SLSAMIVNKYRLR 234 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~ 234 (515)
+-.+-.-.+++++|+++|..|+|+|+|-+...|+.+.+ +.|-.++.++..+
T Consensus 81 ~Hr~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 81 LHRENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 34455677889999999999999999999888765544 3455556665543
No 243
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.39 E-value=24 Score=37.72 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
..++++++|+++|++|+|||.+... |++..--+.-+..|.+-||
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 4588999999999999999999755 5544334555667777887
No 244
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=50.30 E-value=27 Score=38.66 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCC
Q 010193 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN 218 (515)
Q Consensus 181 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~ 218 (515)
.+.+++.+. .+++++|+++|++++|||.|.++..|+.
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~ 81 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL 81 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc
Confidence 455556555 9999999999999999999999988764
No 245
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=50.10 E-value=24 Score=34.38 Aligned_cols=42 Identities=24% Similarity=0.244 Sum_probs=28.3
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhhe
Q 010193 445 FGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSA 486 (515)
Q Consensus 445 ~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sa 486 (515)
.|+-.+.|.|...+.+++.=.++|||+|+=+|-|+|+..+.+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 344466677888888877667999999999999999876543
No 246
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=49.69 E-value=67 Score=34.75 Aligned_cols=25 Identities=8% Similarity=0.177 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCCC--cCCcCEEEEe
Q 010193 189 MYGALDNLFSNTNVN--PKDIGILVVN 213 (515)
Q Consensus 189 a~~Aa~~aL~~agi~--p~dID~LI~~ 213 (515)
...|++++++++|++ ++|||++=+.
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~ 321 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELH 321 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEee
Confidence 457999999999997 7999998776
No 247
>PLN03170 chalcone synthase; Provisional
Probab=47.70 E-value=67 Score=34.43 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE-----E-EecCCcchHHHHHHHH
Q 010193 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----Y-NLGGMGCSAGVIAVDL 256 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~al~l 256 (515)
+-+.+.....++++|+++|++++|||..++.-. -+.+-..+.++||++++-.. + +.++|+.++.+.+|+-
T Consensus 277 ~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~ 352 (401)
T PLN03170 277 GLISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDE 352 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence 346666777889999999999999998776532 24556678999999754321 2 3444555555556655
Q ss_pred H
Q 010193 257 A 257 (515)
Q Consensus 257 A 257 (515)
+
T Consensus 353 ~ 353 (401)
T PLN03170 353 M 353 (401)
T ss_pred H
Confidence 4
No 248
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.63 E-value=35 Score=36.71 Aligned_cols=45 Identities=13% Similarity=0.012 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 233 (515)
..++++++|+++|++|+|||.+-.. |++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 5678999999999999999999754 54433345556677777774
No 249
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=47.60 E-value=41 Score=35.56 Aligned_cols=78 Identities=13% Similarity=0.150 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCC----CCeeEE----EecCCcchHHHHHHHHH
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR----GNIRSY----NLGGMGCSAGVIAVDLA 257 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~----~~~~~~----dl~g~gCsggl~al~lA 257 (515)
+-...|++++|+++|++|+|||.+... +++..-.+.-...|.+-|+-. ..+... .++....++++..+-.+
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~ 358 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKV 358 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHH
Confidence 345689999999999999999999876 433222222233445444422 112211 13333344555555555
Q ss_pred HHHHhcC
Q 010193 258 KDLLQVN 264 (515)
Q Consensus 258 ~~lL~sg 264 (515)
...++.+
T Consensus 359 ~~~l~~~ 365 (421)
T cd00833 359 VLALEHG 365 (421)
T ss_pred HHHHhcC
Confidence 5555544
No 250
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=47.52 E-value=1.1e+02 Score=30.10 Aligned_cols=100 Identities=18% Similarity=0.295 Sum_probs=64.1
Q ss_pred hhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCCh
Q 010193 144 ESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSL 223 (515)
Q Consensus 144 ~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~ 223 (515)
+++..-.+.+.++.|+.+.+..-... .. +-..++.-.++++.+....+++++++- ..|++|..|.. +-.+
T Consensus 119 ~rs~~il~~lv~~~g~s~~~~~vrst-dl-~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAG---ms~l 188 (230)
T COG4126 119 ERSRPILEELVRSYGLSRHCRSVRST-DL-PVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAG---MSDL 188 (230)
T ss_pred cccHHHHHHHHHhcCccccccceeeC-CC-CcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCcc---HHHH
Confidence 44555556677778887766521110 00 112233334667888888888888764 47899999864 3356
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193 224 SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (515)
Q Consensus 224 a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg 264 (515)
+.+++..+|++ . +.| -..++.+|..|++.+
T Consensus 189 a~~Lq~~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 189 ADQLQKAFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 89999999975 2 333 556788888888765
No 251
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=45.91 E-value=66 Score=28.46 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=37.9
Q ss_pred HHHHHHHHhCCCCcCCcCEEEEeecCC--CCCCChHHHHHHHcCCCCCeeEEEecCCcc
Q 010193 191 GALDNLFSNTNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKYRLRGNIRSYNLGGMGC 247 (515)
Q Consensus 191 ~Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gC 247 (515)
+-.++.+++.+++++||--+++..++| ...| +..++++|.-.+++-++...|.=
T Consensus 24 eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V 79 (117)
T cd02185 24 ELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDV 79 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCC
Confidence 334566788999999999999987764 4456 56667774434787777765443
No 252
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.83 E-value=46 Score=35.57 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 188 la~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
-..+|++++|+++|++|+|||.+-.. |.+..-.+.-...+.+.||
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 35688999999999999999998755 5433223344556777776
No 253
>PLN03173 chalcone synthase; Provisional
Probab=45.44 E-value=71 Score=34.14 Aligned_cols=52 Identities=10% Similarity=0.094 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCe
Q 010193 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI 237 (515)
Q Consensus 182 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~ 237 (515)
.+-+.......++++|+++|++++|||..++.-. -+.+-..++++||++++-
T Consensus 272 p~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ek 323 (391)
T PLN03173 272 PGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEK 323 (391)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHH
Confidence 3446667777889999999999999999776532 245667799999997543
No 254
>PRK12404 stage V sporulation protein AD; Provisional
Probab=45.36 E-value=89 Score=32.67 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC--------CeeEEEe--------cCCcchHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG--------NIRSYNL--------GGMGCSAGVI 252 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~--------~~~~~dl--------~g~gCsggl~ 252 (515)
|+..+.+=|+++|.+|+|-|+||..=-. ..--.+...+..+-|+.- .+.-||- +|-|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGDLg-~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGDLG-HVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcchH-HHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 5556667789999999999999976210 111122333333334321 1234443 3446777666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC
Q 010193 253 AVDLAKDLLQVNWNTYAVVVSTENI 277 (515)
Q Consensus 253 al~lA~~lL~sg~~~~aLVVs~E~~ 277 (515)
.=.+-+.| +.+..+++|+|+|=.+
T Consensus 287 ~g~~~~~~-~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 287 YGHLLNRM-KRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHHH-hcCCceEEEEEEchhh
Confidence 55555554 4567899999998763
No 255
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=44.41 E-value=91 Score=33.68 Aligned_cols=44 Identities=9% Similarity=0.100 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 232 (515)
...|++++|+++|++|+|||.+-.. +.+..-.+.-...+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 5678999999999999999998765 4332222333334444444
No 256
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=42.75 E-value=1.1e+02 Score=32.66 Aligned_cols=41 Identities=10% Similarity=0.213 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCC--cCCcCEEEEe-ecCCCCCCChHHHHHHHcCCC
Q 010193 189 MYGALDNLFSNTNVN--PKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 189 a~~Aa~~aL~~agi~--p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
...|++++++++|++ ++|||++=+. +- ....-+..+.||+.
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~ 311 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLS 311 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCC
Confidence 457899999999997 7999998665 31 22234455666664
No 257
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=42.35 E-value=27 Score=36.00 Aligned_cols=87 Identities=18% Similarity=0.229 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCC-------eeEEEec---------CCcchHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN-------IRSYNLG---------GMGCSAGVI 252 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~---------g~gCsggl~ 252 (515)
|+..+.+=|+++|.+|+|-|+||..=-. ..--.+...+.++-|+.-. +.-||.. |-|||+.+.
T Consensus 205 A~dTI~~h~~D~g~~p~dYDlIvTGDLg-~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~ 283 (329)
T PF07451_consen 205 AADTIEQHFKDTGRSPDDYDLIVTGDLG-KVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHHCT--GGG-SEEEESS-H-HHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhcCeEEecchH-HHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHH
Confidence 4455566788999999999999976210 0011233444445454210 1223322 456776666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC
Q 010193 253 AVDLAKDLLQVNWNTYAVVVSTENI 277 (515)
Q Consensus 253 al~lA~~lL~sg~~~~aLVVs~E~~ 277 (515)
.=.+-+.| +.|..+++|+|+|=.+
T Consensus 284 ~g~ll~~l-~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 284 CGYLLPKL-RKGELKRVLFVATGAL 307 (329)
T ss_dssp HHCHHHHH-HTTS-SEEEEEEEEE-
T ss_pred HHHHHHHH-HcCCceEEEEEEchhh
Confidence 55555554 4577899999998763
No 258
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=41.86 E-value=78 Score=32.87 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=45.5
Q ss_pred HHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC-------CeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 191 GALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG-------NIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 191 ~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~-------~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
-|+.++|+++|+..+|||+.=.|-- .-|-+.+-.++||+.+ .+.++.-- .||+|.=.-.-+-+.|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 4788999999999999998766521 1223345678888853 23444445 5788776666666555544
Q ss_pred CC
Q 010193 264 NW 265 (515)
Q Consensus 264 g~ 265 (515)
+.
T Consensus 399 gk 400 (435)
T KOG1389|consen 399 GK 400 (435)
T ss_pred cc
Confidence 43
No 259
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=40.60 E-value=1.2e+02 Score=31.76 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC-------CCeeEEEe--------cCCcchHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR-------GNIRSYNL--------GGMGCSAGVIA 253 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~-------~~~~~~dl--------~g~gCsggl~a 253 (515)
|+..+.+=|+++|.+|+|-|+||..=-. ..--.+...+..+-|+. ....-||- +|-|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgdlg-~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGDLA-RVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecchH-HHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 5555667789999999999999976310 01112223333333331 11334433 33467776666
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccC
Q 010193 254 VDLAKDLLQVNWNTYAVVVSTENI 277 (515)
Q Consensus 254 l~lA~~lL~sg~~~~aLVVs~E~~ 277 (515)
=.+-+.| +.+..+++|+|+|=.+
T Consensus 283 ~~~~~~~-~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 283 GHILKEM-LRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHHH-hcCcceEEEEEEchhh
Confidence 5555554 4567899999998763
No 260
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=40.40 E-value=3.6e+02 Score=28.73 Aligned_cols=56 Identities=16% Similarity=-0.119 Sum_probs=36.2
Q ss_pred cccCEEEeccCCHHHHHHHHHHcCCCch------------------hhhhhccccccccccccchHHHHHHHHHH
Q 010193 406 LAFDHFCIHAGGRAVIDELEKNLQLLPV------------------HVEASRMTLHRFGNTSSSSIWYELAYIEA 462 (515)
Q Consensus 406 ~did~~~~H~~g~~vl~~v~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSaSi~~~La~~~~ 462 (515)
+|||.+-+|-.-..+.-...+.||+-+. .+.+| --+--+||...++-...+.++..
T Consensus 282 ~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~~e~~~ 355 (392)
T PRK06065 282 KEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPS-GGLLGVGNPIAAAGLMKVISIYW 355 (392)
T ss_pred hhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCCCccHHHHHHHHHHHH
Confidence 6899999999876665566688886442 12111 11223789887777777776654
No 261
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=40.19 E-value=81 Score=33.50 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC--------ChHHHHHHHcCCC
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP--------SLSAMIVNKYRLR 234 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P--------s~a~~I~~~LGl~ 234 (515)
+.+...+-..+-.+|++++++++++++++||+|=....+-+..| ...+.|+++.|++
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~ 126 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT 126 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC
Confidence 44555667778889999999999999999999987743322223 2477899999986
No 262
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=40.04 E-value=1.3e+02 Score=29.78 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=42.3
Q ss_pred ccccCEEEe----ccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEC
Q 010193 405 KLAFDHFCI----HAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFG 478 (515)
Q Consensus 405 ~~did~~~~----H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafG 478 (515)
.+||+|++. -...+.+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.=
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 489999996 2334556668999999987544 5566666766666655443444433 589999988754
No 263
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=39.99 E-value=26 Score=35.35 Aligned_cols=29 Identities=17% Similarity=0.387 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEe
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVN 213 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~ 213 (515)
--||...|++++++++|+.|.||+++=..
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 45788899999999999999999998765
No 264
>PLN03171 chalcone synthase-like protein; Provisional
Probab=39.73 E-value=81 Score=33.72 Aligned_cols=71 Identities=10% Similarity=0.069 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHh---------CCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE-----E-EecCCcc
Q 010193 183 EEAEQVMYGALDNLFSN---------TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----Y-NLGGMGC 247 (515)
Q Consensus 183 ~ea~~la~~Aa~~aL~~---------agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gC 247 (515)
++...++.++++++|++ .|++++|||.+++ +. -+.+-..+.++||++++-.. + +.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---PG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---CC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 34555665566666655 5888899987642 21 23566778999999754322 2 4555566
Q ss_pred hHHHHHHHHHH
Q 010193 248 SAGVIAVDLAK 258 (515)
Q Consensus 248 sggl~al~lA~ 258 (515)
++...+|+-+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66666666543
No 265
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=37.80 E-value=80 Score=33.68 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCCC--cCCcCEEEEe
Q 010193 190 YGALDNLFSNTNVN--PKDIGILVVN 213 (515)
Q Consensus 190 ~~Aa~~aL~~agi~--p~dID~LI~~ 213 (515)
..|++++++++|++ ++|||++-++
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~ 284 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD 284 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe
Confidence 36999999999997 6999999876
No 266
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=37.39 E-value=94 Score=27.57 Aligned_cols=52 Identities=10% Similarity=0.191 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCC--CCCCChHHHHHHHc-CCCCCeeEEEecC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKY-RLRGNIRSYNLGG 244 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g 244 (515)
..+-.++.+++.+++|+||--+++.+++| ...|+.+ ++++ |+. +++-+...-
T Consensus 22 t~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 22 TRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 33445667788999999999999998765 4567543 4455 775 676666553
No 267
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=37.02 E-value=66 Score=33.89 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCCh--HHHHHHHcCCCCCeeEEEecC
Q 010193 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSL--SAMIVNKYRLRGNIRSYNLGG 244 (515)
Q Consensus 186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~--a~~I~~~LGl~~~~~~~dl~g 244 (515)
.+.....++++|+++|++++|||.|.++..|+.. +++ ....++-|...-+++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~-~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGMG-APLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcH-hhHHHHHHHHHHHHHHcCCCEeecch
Confidence 3445677899999999999999999999887632 221 222233332222345666663
No 268
>PRK13410 molecular chaperone DnaK; Provisional
Probab=36.51 E-value=1.1e+02 Score=35.27 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHH
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVD 255 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 255 (515)
+++-.++..+-....++++|+++|+++++||.|+..... .-.|.+-.+|.+.+|.. ...+++..-|.+.=.|+.
T Consensus 300 FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 300 FESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 344444445556677899999999999999998877422 34798999999999854 233444334444433433
No 269
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=35.57 E-value=1.9e+02 Score=32.77 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
+++..++..+=..+.++++|+++|+++++||.|+..... .-.|.+-.+|.+.+|..
T Consensus 284 fe~l~~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 284 FEALIQPLVQKTLSICRRALRDAGLSVEEIKGVVLVGGS-TRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCc-CCChHHHHHHHHHhCCC
Confidence 334444444446677899999999999999999876421 34799999999999864
No 270
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=34.97 E-value=1.8e+02 Score=32.99 Aligned_cols=56 Identities=9% Similarity=0.055 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
+++..++..+=....++++|+++|+.++|||.|+..... .-.|.+..+|.+.+|..
T Consensus 300 fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (616)
T PRK05183 300 FNALIAPLVKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccC
Confidence 333333444446667889999999999999999987422 24788999999999865
No 271
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=32.38 E-value=91 Score=33.32 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEe
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVN 213 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~ 213 (515)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 578999999999999999988755
No 272
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=31.54 E-value=45 Score=29.57 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=33.9
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEE-EChhHhhhheeeEeeccCC-CCC-----CCCcccccc
Q 010193 451 SSIWYELAYIEAKGRMCRGHRVWQIA-FGSGFKCNSAVWQALQNVK-PSH-----HSPWEDCID 507 (515)
Q Consensus 451 aSi~~~La~~~~~g~i~~GD~Vllia-fGsG~~~~sav~r~~~~~~-~~~-----~~~w~~~~~ 507 (515)
|.++++=+++.+-| ++.||+|.+-+ || .+|+++-..-. ++. .+||+.++-
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi 87 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVI 87 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceee
Confidence 44555666666654 68999999887 77 67777765532 112 589999864
No 273
>PLN03172 chalcone synthase family protein; Provisional
Probab=31.52 E-value=1.4e+02 Score=31.94 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeE-----E-EecCCcchHHHHHHHHH
Q 010193 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----Y-NLGGMGCSAGVIAVDLA 257 (515)
Q Consensus 184 ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~al~lA 257 (515)
.+.......++++|+++|++..|||..++.-. -+.+-..|+++||++++-.. + +.++|+.++.+.+|+-+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 45666667788999999999999999765432 24566779999999754332 2 33445555555666543
No 274
>PLN03184 chloroplast Hsp70; Provisional
Probab=29.70 E-value=1.6e+02 Score=33.82 Aligned_cols=73 Identities=11% Similarity=0.075 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHH
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAV 254 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al 254 (515)
+++..++..+-....++++|++++++++|||.|+..... .-+|.+-.+|.+.+|.. ....++..-|.+.=.|+
T Consensus 337 fe~l~~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi 409 (673)
T PLN03184 337 FEELCSDLLDRCKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAV 409 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCC---cccccCcchHHHHHHHH
Confidence 333333444445667889999999999999999987422 24799999999999864 23445543444333333
No 275
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=29.05 E-value=54 Score=32.00 Aligned_cols=39 Identities=28% Similarity=0.291 Sum_probs=28.7
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhh
Q 010193 445 FGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNS 485 (515)
Q Consensus 445 ~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~s 485 (515)
+|-|-| .|...+.+.+.=.+++||+|+=||-|+||..+.
T Consensus 51 ~gqtis--~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAv 89 (209)
T COG2518 51 CGQTIS--APHMVARMLQLLELKPGDRVLEIGTGSGYQAAV 89 (209)
T ss_pred CCceec--CcHHHHHHHHHhCCCCCCeEEEECCCchHHHHH
Confidence 444443 466666666665789999999999999987543
No 276
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.38 E-value=62 Score=34.23 Aligned_cols=45 Identities=13% Similarity=0.122 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEE-EeecCCCCCCChHHHHHHHcCC
Q 010193 189 MYGALDNLFSNTNVNPKDIGILV-VNCSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI-~~~s~~~~~Ps~a~~I~~~LGl 233 (515)
+..|.+++|+++|+.|+|||.|= ++||+..---.-+..|.+-|+-
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 67789999999999999999987 4466432222223445555553
No 277
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=27.84 E-value=5.9e+02 Score=25.85 Aligned_cols=50 Identities=18% Similarity=0.288 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCcee
Q 010193 99 GLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET 163 (515)
Q Consensus 99 ~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~ 163 (515)
..+-|++.+|+ .-++...|.+.++....==.|.+...++.++..|+|.-.
T Consensus 9 ~~t~~l~~~p~---------------~~~~l~~f~~~~~~aks~ised~~i~~~~~~~~~~g~~~ 58 (268)
T TIGR01743 9 DLTNYLITNPN---------------KLIPLNFFSERYESAKSSISEDIVIIKETFEKFGIGKLL 58 (268)
T ss_pred HHHHHHHhCCC---------------ceEcHHHHHHHhccccchhhhhHHHHHHHHHhcCCceEE
Confidence 34667777765 346666666666542210123366667778888877653
No 278
>CHL00094 dnaK heat shock protein 70
Probab=27.74 E-value=1.7e+02 Score=33.17 Aligned_cols=49 Identities=10% Similarity=0.169 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC
Q 010193 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
..+-....++++|+++++++++||.|+..... .-.|.+-.+|.+.+|..
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 307 LINRCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 33345566789999999999999999987432 35799999999999854
No 279
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=27.36 E-value=2.2e+02 Score=32.68 Aligned_cols=65 Identities=11% Similarity=0.060 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHH
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVD 255 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 255 (515)
+=....++++|+++|++++|||.||..... .-+|.+-.+|.+.+|..+ . .+++-.-|.+.=.|+.
T Consensus 334 ~r~~~~v~~~L~~a~~~~~dId~VvLVGGs-sriP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 334 ERSIAPCKQCMKDAGVELKEINDVVLVGGM-TRMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCc-ccChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHH
Confidence 335567889999999999999999877421 357999999999998642 2 3444334444433433
No 280
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=26.81 E-value=2e+02 Score=32.74 Aligned_cols=74 Identities=8% Similarity=0.098 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHH
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVD 255 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 255 (515)
++...++..+=..+.++++|+++++++++||.|+..... .-.|.+-.+|.+.+|.. ...+++-.-|.+.=.|+.
T Consensus 298 fe~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~---~~~~~npdeava~GAa~~ 371 (627)
T PRK00290 298 FEELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKE---PNKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCC---CCcCcCChHHHHHhHHHH
Confidence 333344444446677899999999999999999977422 24799999999999864 223344344554444443
No 281
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=26.46 E-value=1.6e+02 Score=33.03 Aligned_cols=73 Identities=7% Similarity=0.101 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHH
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAV 254 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al 254 (515)
+++..++..+=..+.++++|+++|+++++||.|++.... .-.|.+-.+|.+.+|.. ...+++-.-|.+.=.|+
T Consensus 296 fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~ 368 (595)
T TIGR02350 296 FEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAI 368 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHH
Confidence 344444444446677899999999999999999987422 24799999999999843 22334433444433344
No 282
>PRK08329 threonine synthase; Validated
Probab=25.26 E-value=68 Score=33.56 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=29.8
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHh
Q 010193 449 SSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFK 482 (515)
Q Consensus 449 sSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~ 482 (515)
+|+..+..+..+.++|.+++|++|+++--|+|+|
T Consensus 312 ssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 312 TSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred cHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 4677788888888999999999999999999976
No 283
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=25.11 E-value=1.4e+02 Score=31.59 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCC----------ChHHHHHHHcCCC
Q 010193 177 SMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP----------SLSAMIVNKYRLR 234 (515)
Q Consensus 177 ~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P----------s~a~~I~~~LGl~ 234 (515)
.+.+.+++-..+-++|+..+|++.++.|+||+.|.+..-+-...| ....+|+++.|++
T Consensus 63 ~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~ 130 (371)
T COG2377 63 ELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGIT 130 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCc
Confidence 345566677778889999999999999999997766532222111 3568999999986
No 284
>PRK13411 molecular chaperone DnaK; Provisional
Probab=24.58 E-value=2e+02 Score=32.98 Aligned_cols=55 Identities=9% Similarity=0.225 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCC
Q 010193 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRL 233 (515)
Q Consensus 178 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl 233 (515)
+++..++..+=..+.++++|+++++++++||.|+..... .-.|.+-.+|.+.+|-
T Consensus 299 fe~l~~~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~ 353 (653)
T PRK13411 299 FEELTKDLVEATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCC
Confidence 333333344446677899999999999999988876421 3479999999999974
No 285
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=24.55 E-value=2e+02 Score=26.94 Aligned_cols=81 Identities=10% Similarity=0.057 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhC--CCCcCCcCEEEE-eecCCCCCC--ChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Q 010193 189 MYGALDNLFSNT--NVNPKDIGILVV-NCSLFNPTP--SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (515)
Q Consensus 189 a~~Aa~~aL~~a--gi~p~dID~LI~-~~s~~~~~P--s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~s 263 (515)
+..++++.+++- .-.-+.|+++++ +.+.....| +....+...|.- . ... .|=++.-.||.+|.++++.
T Consensus 29 ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~---~--~~~--~G~t~l~~aL~~A~~~l~~ 101 (183)
T cd01453 29 VLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT---A--REC--SGEPSLQNGLEMALESLKH 101 (183)
T ss_pred HHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc---c--cCC--CCchhHHHHHHHHHHHHhc
Confidence 344444444431 122356999999 555443333 223345555531 2 112 2447888999999999975
Q ss_pred CC---CCeEEEEEecc
Q 010193 264 NW---NTYAVVVSTEN 276 (515)
Q Consensus 264 g~---~~~aLVVs~E~ 276 (515)
.+ .++++|+.++.
T Consensus 102 ~~~~~~~~iiil~sd~ 117 (183)
T cd01453 102 MPSHGSREVLIIFSSL 117 (183)
T ss_pred CCccCceEEEEEEcCC
Confidence 32 45688887663
No 286
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=24.11 E-value=4.9e+02 Score=27.03 Aligned_cols=105 Identities=10% Similarity=0.192 Sum_probs=58.9
Q ss_pred CCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHHH
Q 010193 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (515)
Q Consensus 107 r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~ 186 (515)
....-||++.++| |. +-+..+........ ..|- .=|-++|....||..|.+-.+... + ..
T Consensus 209 HsgsdYiISrATF-P~--YFiKeq~vv~~s~t--~iDl--~iFr~~iA~aLgIThRfVG~EP~c-----~--------vT 268 (352)
T COG3053 209 HSGSDYIISRATF-PA--YFIKEQSVVNDSQT--EIDL--KIFRKYIAPALGITHRFVGTEPFC-----R--------VT 268 (352)
T ss_pred ecCCCeEEEeccc-ch--hhhhhHHHHHHHHH--HHHH--HHHHHHHHHHhCcceeeecCCCCc-----H--------HH
Confidence 3456799999888 66 44443333332221 0111 124445888899999977433221 1 11
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHc
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY 231 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~L 231 (515)
..=-+..++-|.+++++.--|++++.--......|=-|+.|-..|
T Consensus 269 ~~YNq~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l 313 (352)
T COG3053 269 AIYNQQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLL 313 (352)
T ss_pred HHHHHHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHH
Confidence 122334567888888888889988887433334454455554444
No 287
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=23.28 E-value=2.3e+02 Score=32.46 Aligned_cols=64 Identities=9% Similarity=0.161 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHH
Q 010193 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVD 255 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 255 (515)
....++++|+++++++++||.|+..... .-.|.+-.+|.+.+|-+. ...+++..-|.+.=.|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGS-TRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCC-CCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 4567899999999999999999877421 357999999999997431 233344334444333443
No 288
>PLN02854 3-ketoacyl-CoA synthase
Probab=23.27 E-value=3.3e+02 Score=30.43 Aligned_cols=42 Identities=7% Similarity=0.155 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCc------CCcCEEEEeecCCCCCCChHHHHHHHcCCC
Q 010193 189 MYGALDNLFSNTNVNP------KDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 189 a~~Aa~~aL~~agi~p------~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
+...+++.|.++|+++ +|||..+..-. -..+-..|+++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5678899999999987 58888776532 234456789999996
No 289
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=23.13 E-value=2.5e+02 Score=29.59 Aligned_cols=72 Identities=18% Similarity=0.265 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhCCC-CcCCcCEEEEeecCCCCCCChHHHHHHHc--CCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193 185 AEQVMYGALDNLFSNTNV-NPKDIGILVVNCSLFNPTPSLSAMIVNKY--RLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (515)
Q Consensus 185 a~~la~~Aa~~aL~~agi-~p~dID~LI~~~s~~~~~Ps~a~~I~~~L--Gl~~~~~~~dl~g~gCsggl~al~lA~~lL 261 (515)
..+....|++++++++|| +|.|+-.+=+=| |.++. ..|.... |-+ -+..--...|+=|-+..||.+|-.|=
T Consensus 130 qV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc----PLLT~-~~i~~A~~RG~~-~~t~dt~~SM~~SrgASALGvAvALG 203 (365)
T PF09663_consen 130 QVEEVAAAVRAAMADAGITDPADVHFVQVKC----PLLTS-ERIADAKARGKT-VATEDTYESMAYSRGASALGVAVALG 203 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCChhheeeEEecC----CcCCH-HHHHHHHhCCCc-eeecccccccccccchhHHHHHHHhc
Confidence 456677899999999999 899987766555 23332 3343322 222 11112233366666777777777763
Q ss_pred h
Q 010193 262 Q 262 (515)
Q Consensus 262 ~ 262 (515)
+
T Consensus 204 E 204 (365)
T PF09663_consen 204 E 204 (365)
T ss_pred c
Confidence 3
No 290
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.59 E-value=1.7e+02 Score=31.13 Aligned_cols=35 Identities=14% Similarity=0.316 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEee
Q 010193 180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNC 214 (515)
Q Consensus 180 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~ 214 (515)
-.+|...+|......+++++++++.+|+|.+|=+|
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 35677899999999999999999999999999765
No 291
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=21.01 E-value=1.8e+02 Score=33.31 Aligned_cols=47 Identities=6% Similarity=0.195 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCC
Q 010193 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (515)
Q Consensus 187 ~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~ 234 (515)
+=....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|..
T Consensus 348 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 348 KKTIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 334667789999999999999999977421 34789999999999864
No 292
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=20.31 E-value=1.6e+02 Score=39.21 Aligned_cols=75 Identities=15% Similarity=0.176 Sum_probs=50.3
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEe-ecCCCCCCChHHHHHHHcCCCC----Cee----EEEecCCcchHHHHHHHHHHHH
Q 010193 190 YGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG----NIR----SYNLGGMGCSAGVIAVDLAKDL 260 (515)
Q Consensus 190 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~----~~~----~~dl~g~gCsggl~al~lA~~l 260 (515)
.++++++|+++|++|+|||.|-.. |.+..--|.-...|.+-||-.. .+. --+++...+++|+.++.-+.-.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 578999999999999999988754 5443334544566666665321 111 1256666778888887777666
Q ss_pred HhcC
Q 010193 261 LQVN 264 (515)
Q Consensus 261 L~sg 264 (515)
|+.+
T Consensus 398 l~~~ 401 (2582)
T TIGR02813 398 LHHK 401 (2582)
T ss_pred HhcC
Confidence 6654
Done!