Query 010200
Match_columns 515
No_of_seqs 237 out of 2918
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 22:04:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010200.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010200hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa1_A PGAE, polyketide oxygen 100.0 1.3E-43 4.4E-48 371.4 42.3 374 50-506 6-384 (500)
2 2qa2_A CABE, polyketide oxygen 100.0 1.6E-43 5.4E-48 370.6 42.0 371 53-506 10-385 (499)
3 3fmw_A Oxygenase; mithramycin, 100.0 1.8E-44 6.2E-49 382.6 30.5 376 54-507 48-431 (570)
4 3rp8_A Flavoprotein monooxygen 100.0 1.9E-43 6.6E-48 362.1 34.9 374 51-499 19-399 (407)
5 2x3n_A Probable FAD-dependent 100.0 5.9E-44 2E-48 365.0 29.9 375 54-499 5-388 (399)
6 1k0i_A P-hydroxybenzoate hydro 100.0 2E-41 6.8E-46 345.6 28.3 377 55-504 2-388 (394)
7 1pn0_A Phenol 2-monooxygenase; 100.0 8.9E-41 3E-45 360.5 32.7 354 55-472 8-426 (665)
8 4hb9_A Similarities with proba 100.0 8.3E-41 2.8E-45 342.6 26.0 364 56-485 2-401 (412)
9 3ihg_A RDME; flavoenzyme, anth 100.0 9.2E-40 3.1E-44 346.3 31.5 344 54-470 4-374 (535)
10 2dkh_A 3-hydroxybenzoate hydro 100.0 2.5E-38 8.6E-43 341.0 36.5 352 53-472 30-417 (639)
11 2r0c_A REBC; flavin adenine di 100.0 1.6E-38 5.4E-43 337.0 30.9 353 54-488 25-409 (549)
12 2vou_A 2,6-dihydroxypyridine h 100.0 5.9E-38 2E-42 320.2 33.1 335 54-472 4-371 (397)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.5E-38 8.5E-43 321.0 28.4 324 54-462 10-343 (379)
14 3c96_A Flavin-containing monoo 100.0 2.5E-37 8.7E-42 316.9 28.5 338 53-463 2-366 (410)
15 3i3l_A Alkylhalidase CMLS; fla 100.0 1.2E-36 4.1E-41 323.1 33.7 353 52-472 20-386 (591)
16 3e1t_A Halogenase; flavoprotei 100.0 4.8E-36 1.7E-40 315.7 36.2 385 54-507 6-403 (512)
17 3oz2_A Digeranylgeranylglycero 100.0 7.9E-36 2.7E-40 303.7 35.4 338 54-469 3-350 (397)
18 2xdo_A TETX2 protein; tetracyc 100.0 9.1E-37 3.1E-41 311.5 27.8 351 53-476 24-393 (398)
19 3nix_A Flavoprotein/dehydrogen 100.0 2.6E-35 8.7E-40 303.1 33.7 338 54-461 4-351 (421)
20 3cgv_A Geranylgeranyl reductas 100.0 3.4E-34 1.2E-38 292.2 34.7 340 54-471 3-352 (397)
21 3atr_A Conserved archaeal prot 100.0 1.7E-34 5.7E-39 299.6 29.6 335 54-471 5-357 (453)
22 3c4a_A Probable tryptophan hyd 100.0 5.3E-35 1.8E-39 296.7 15.1 337 56-486 1-353 (381)
23 2weu_A Tryptophan 5-halogenase 100.0 7.2E-31 2.5E-35 276.6 36.6 363 55-508 2-442 (511)
24 2pyx_A Tryptophan halogenase; 100.0 2.3E-31 7.9E-36 280.9 32.3 336 54-471 6-417 (526)
25 2gmh_A Electron transfer flavo 100.0 6.1E-31 2.1E-35 280.1 32.6 346 53-471 33-427 (584)
26 2aqj_A Tryptophan halogenase, 100.0 6.6E-30 2.2E-34 270.7 34.7 330 54-470 4-400 (538)
27 2e4g_A Tryptophan halogenase; 100.0 1.5E-29 5.1E-34 268.3 36.6 360 54-504 24-461 (550)
28 3ihm_A Styrene monooxygenase A 100.0 1.5E-28 5.2E-33 252.9 19.7 369 54-502 21-407 (430)
29 2bry_A NEDD9 interacting prote 99.9 1.4E-22 4.8E-27 211.8 23.7 314 53-457 90-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.9 2.3E-20 7.9E-25 185.4 22.7 307 55-434 2-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.7 1.3E-15 4.4E-20 153.8 16.0 193 166-430 159-361 (382)
32 2gag_B Heterotetrameric sarcos 99.6 4.9E-14 1.7E-18 143.3 23.1 117 167-307 170-287 (405)
33 2oln_A NIKD protein; flavoprot 99.6 8.5E-14 2.9E-18 141.3 21.6 69 166-256 148-217 (397)
34 1y56_B Sarcosine oxidase; dehy 99.6 9.6E-14 3.3E-18 140.1 21.3 69 167-257 145-215 (382)
35 2gf3_A MSOX, monomeric sarcosi 99.6 2.2E-13 7.6E-18 137.6 21.7 115 166-304 145-267 (389)
36 3ps9_A TRNA 5-methylaminomethy 99.5 1.5E-13 5.2E-18 149.0 19.7 63 166-249 412-474 (676)
37 3nyc_A D-arginine dehydrogenas 99.5 4.7E-14 1.6E-18 142.1 14.5 70 166-257 149-219 (381)
38 3kkj_A Amine oxidase, flavin-c 99.5 4.4E-13 1.5E-17 128.0 20.1 37 55-95 2-38 (336)
39 2qcu_A Aerobic glycerol-3-phos 99.5 5.2E-13 1.8E-17 139.7 22.0 116 166-302 144-267 (501)
40 3pvc_A TRNA 5-methylaminomethy 99.5 4.4E-13 1.5E-17 145.6 21.7 63 166-249 407-470 (689)
41 2uzz_A N-methyl-L-tryptophan o 99.5 1E-11 3.5E-16 124.6 24.4 62 166-249 144-205 (372)
42 3v76_A Flavoprotein; structura 99.5 1.2E-13 4.1E-18 140.5 10.2 156 51-248 23-187 (417)
43 3da1_A Glycerol-3-phosphate de 99.4 1.2E-12 4.2E-17 138.4 15.9 113 166-300 165-287 (561)
44 3i6d_A Protoporphyrinogen oxid 99.4 5.5E-12 1.9E-16 130.7 20.3 72 55-130 5-87 (470)
45 2i0z_A NAD(FAD)-utilizing dehy 99.4 1.7E-13 6E-18 141.2 7.8 170 54-258 25-212 (447)
46 3nlc_A Uncharacterized protein 99.4 3.3E-13 1.1E-17 141.2 9.7 147 52-249 104-278 (549)
47 3dme_A Conserved exported prot 99.4 5.2E-12 1.8E-16 126.4 17.9 72 166-257 145-220 (369)
48 3dje_A Fructosyl amine: oxygen 99.4 1.5E-12 5.3E-17 133.8 13.4 63 166-249 156-222 (438)
49 2gqf_A Hypothetical protein HI 99.4 9E-13 3.1E-17 133.6 10.7 154 54-248 3-168 (401)
50 1rp0_A ARA6, thiazole biosynth 99.4 8.2E-12 2.8E-16 120.5 16.0 145 54-254 38-197 (284)
51 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 3E-11 1E-15 119.9 20.5 146 56-246 2-163 (342)
52 3jsk_A Cypbp37 protein; octame 99.4 4E-12 1.4E-16 124.2 13.2 164 54-254 78-257 (344)
53 3c4n_A Uncharacterized protein 99.4 1.2E-12 3.9E-17 133.3 9.8 70 166-257 167-247 (405)
54 1qo8_A Flavocytochrome C3 fuma 99.3 9.3E-13 3.2E-17 139.8 8.0 160 52-254 118-318 (566)
55 1c0p_A D-amino acid oxidase; a 99.3 5E-11 1.7E-15 119.3 18.8 39 52-94 3-41 (363)
56 3lov_A Protoporphyrinogen oxid 99.3 7.1E-11 2.4E-15 122.6 20.4 73 55-131 4-83 (475)
57 2ywl_A Thioredoxin reductase r 99.3 1.5E-11 5.2E-16 110.1 13.1 118 56-257 2-119 (180)
58 3axb_A Putative oxidoreductase 99.3 9.8E-12 3.4E-16 128.1 12.2 85 166-257 176-264 (448)
59 1y0p_A Fumarate reductase flav 99.3 3.5E-12 1.2E-16 135.6 8.4 157 53-252 124-321 (571)
60 2cul_A Glucose-inhibited divis 99.3 1.2E-11 4.2E-16 115.6 10.7 132 54-257 2-134 (232)
61 4dgk_A Phytoene dehydrogenase; 99.3 9.4E-11 3.2E-15 122.6 18.6 64 171-255 221-285 (501)
62 3ab1_A Ferredoxin--NADP reduct 99.3 1.4E-11 4.7E-16 123.2 11.4 126 53-254 12-137 (360)
63 2zbw_A Thioredoxin reductase; 99.3 1.1E-11 3.9E-16 122.4 10.6 125 53-254 3-127 (335)
64 3nks_A Protoporphyrinogen oxid 99.3 1.5E-10 5.2E-15 120.2 19.2 56 172-249 235-291 (477)
65 3ces_A MNMG, tRNA uridine 5-ca 99.3 3.9E-11 1.3E-15 126.5 14.5 157 54-255 27-188 (651)
66 4a9w_A Monooxygenase; baeyer-v 99.3 2.4E-11 8.1E-16 120.9 11.9 130 55-249 3-133 (357)
67 3cp8_A TRNA uridine 5-carboxym 99.2 7.7E-11 2.6E-15 124.2 15.9 158 52-253 18-179 (641)
68 3ka7_A Oxidoreductase; structu 99.2 8.3E-11 2.8E-15 120.2 15.8 59 171-251 196-255 (425)
69 2gjc_A Thiazole biosynthetic e 99.2 8E-11 2.7E-15 114.4 14.5 155 54-255 64-246 (326)
70 3nrn_A Uncharacterized protein 99.2 3.4E-10 1.2E-14 115.6 19.9 61 171-255 189-249 (421)
71 2zxi_A TRNA uridine 5-carboxym 99.2 9.3E-11 3.2E-15 123.2 14.5 156 54-254 26-186 (637)
72 2ivd_A PPO, PPOX, protoporphyr 99.2 1.2E-09 4.1E-14 113.4 21.8 74 54-131 15-93 (478)
73 2rgh_A Alpha-glycerophosphate 99.2 6.3E-11 2.2E-15 125.5 11.5 110 167-297 184-305 (571)
74 4fk1_A Putative thioredoxin re 99.2 1.2E-10 4.2E-15 113.4 12.3 115 52-248 3-117 (304)
75 3gwf_A Cyclohexanone monooxyge 99.2 1E-10 3.5E-15 122.9 11.7 139 54-250 7-149 (540)
76 2gv8_A Monooxygenase; FMO, FAD 99.1 1.8E-10 6.1E-15 118.7 12.2 165 54-250 5-179 (447)
77 4at0_A 3-ketosteroid-delta4-5a 99.1 2.9E-10 1E-14 119.0 13.8 40 53-96 39-78 (510)
78 3g3e_A D-amino-acid oxidase; F 99.1 1.7E-10 5.8E-15 114.8 11.3 52 165-249 136-187 (351)
79 2q0l_A TRXR, thioredoxin reduc 99.1 1.3E-10 4.3E-15 113.6 10.1 115 56-251 2-117 (311)
80 1w4x_A Phenylacetone monooxyge 99.1 1.6E-10 5.6E-15 121.8 11.1 142 53-250 14-156 (542)
81 3k7m_X 6-hydroxy-L-nicotine ox 99.1 5.7E-10 1.9E-14 114.2 14.8 36 56-95 2-37 (431)
82 1vdc_A NTR, NADPH dependent th 99.1 8.8E-11 3E-15 115.8 8.3 120 54-250 7-126 (333)
83 2q7v_A Thioredoxin reductase; 99.1 2.2E-10 7.4E-15 112.7 10.8 119 53-250 6-125 (325)
84 3itj_A Thioredoxin reductase 1 99.1 1.9E-10 6.3E-15 113.6 10.4 123 52-250 19-144 (338)
85 4ap3_A Steroid monooxygenase; 99.1 9E-11 3.1E-15 123.6 8.5 140 53-249 19-160 (549)
86 3fbs_A Oxidoreductase; structu 99.1 3.5E-10 1.2E-14 109.3 11.7 114 55-251 2-115 (297)
87 3f8d_A Thioredoxin reductase ( 99.1 5.7E-10 1.9E-14 109.2 13.3 113 54-249 14-126 (323)
88 1d4d_A Flavocytochrome C fumar 99.1 4.4E-10 1.5E-14 119.2 13.2 68 169-253 253-322 (572)
89 3uox_A Otemo; baeyer-villiger 99.1 2.5E-10 8.5E-15 120.1 10.4 141 53-250 7-149 (545)
90 1pj5_A N,N-dimethylglycine oxi 99.1 3.2E-10 1.1E-14 125.7 11.2 69 166-256 146-216 (830)
91 3lzw_A Ferredoxin--NADP reduct 99.1 4.3E-10 1.5E-14 110.6 10.6 118 55-249 7-124 (332)
92 3cty_A Thioredoxin reductase; 99.1 7.1E-10 2.4E-14 108.7 11.6 116 52-250 13-128 (319)
93 3d1c_A Flavin-containing putat 99.0 6.3E-10 2.1E-14 111.3 11.2 141 54-249 3-144 (369)
94 2a87_A TRXR, TR, thioredoxin r 99.0 5.4E-10 1.9E-14 110.4 10.6 117 52-250 11-128 (335)
95 1kf6_A Fumarate reductase flav 99.0 8.4E-10 2.9E-14 117.4 12.2 66 170-254 133-203 (602)
96 1fl2_A Alkyl hydroperoxide red 99.0 7.3E-10 2.5E-14 108.0 10.2 117 55-250 1-117 (310)
97 1trb_A Thioredoxin reductase; 99.0 4.6E-10 1.6E-14 110.0 8.8 115 54-250 4-118 (320)
98 1chu_A Protein (L-aspartate ox 99.0 1.1E-09 3.6E-14 115.3 11.6 38 53-95 6-43 (540)
99 2xve_A Flavin-containing monoo 99.0 5.2E-10 1.8E-14 115.6 8.9 151 56-251 3-169 (464)
100 4a5l_A Thioredoxin reductase; 99.0 2.1E-09 7.1E-14 104.9 11.5 119 54-248 3-121 (314)
101 2wdq_A Succinate dehydrogenase 99.0 2.2E-09 7.6E-14 113.9 11.6 63 171-250 143-208 (588)
102 3s5w_A L-ornithine 5-monooxyge 98.9 1.3E-09 4.4E-14 112.8 9.2 155 54-250 29-194 (463)
103 2e5v_A L-aspartate oxidase; ar 98.9 3.3E-09 1.1E-13 109.7 12.3 62 169-253 117-181 (472)
104 2vvm_A Monoamine oxidase N; FA 98.9 9.4E-09 3.2E-13 107.1 15.8 59 171-249 255-313 (495)
105 4gde_A UDP-galactopyranose mut 98.9 1E-09 3.5E-14 114.9 7.6 42 53-97 8-49 (513)
106 2h88_A Succinate dehydrogenase 98.9 5.3E-09 1.8E-13 111.3 12.8 63 170-250 154-219 (621)
107 1hyu_A AHPF, alkyl hydroperoxi 98.9 4E-09 1.4E-13 110.6 10.6 118 53-249 210-327 (521)
108 2bs2_A Quinol-fumarate reducta 98.9 7.2E-09 2.5E-13 111.0 12.1 62 171-250 158-222 (660)
109 4gcm_A TRXR, thioredoxin reduc 98.9 1.1E-08 3.9E-13 99.7 12.0 35 54-92 5-39 (312)
110 1s3e_A Amine oxidase [flavin-c 98.9 1.9E-08 6.4E-13 105.6 14.3 70 54-127 3-78 (520)
111 4gut_A Lysine-specific histone 98.8 6E-08 2E-12 105.7 18.2 39 54-96 335-373 (776)
112 2a8x_A Dihydrolipoyl dehydroge 98.8 3.4E-09 1.2E-13 109.6 7.6 143 55-252 3-150 (464)
113 3o0h_A Glutathione reductase; 98.8 9.3E-09 3.2E-13 106.9 10.6 59 171-250 232-290 (484)
114 1jnr_A Adenylylsulfate reducta 98.8 3.1E-08 1.1E-12 106.3 14.8 37 54-94 21-61 (643)
115 1v59_A Dihydrolipoamide dehydr 98.8 4.9E-09 1.7E-13 108.8 7.9 37 54-94 4-40 (478)
116 3gyx_A Adenylylsulfate reducta 98.8 4.1E-08 1.4E-12 105.1 13.4 68 168-250 163-235 (662)
117 1q1r_A Putidaredoxin reductase 98.8 7.6E-09 2.6E-13 105.9 7.0 37 54-94 3-41 (431)
118 3r9u_A Thioredoxin reductase; 98.8 2.1E-08 7E-13 97.7 9.7 112 54-248 3-118 (315)
119 1dxl_A Dihydrolipoamide dehydr 98.7 1.3E-08 4.3E-13 105.5 8.3 37 54-94 5-41 (470)
120 3l8k_A Dihydrolipoyl dehydroge 98.7 1.4E-08 4.9E-13 104.9 8.2 37 54-94 3-39 (466)
121 3qfa_A Thioredoxin reductase 1 98.7 6.9E-08 2.3E-12 101.1 12.8 37 52-92 29-65 (519)
122 3p1w_A Rabgdi protein; GDI RAB 98.7 8.1E-08 2.8E-12 98.3 12.3 58 171-247 256-313 (475)
123 1ojt_A Surface protein; redox- 98.7 1.2E-08 4.2E-13 105.9 6.0 38 53-94 4-41 (482)
124 2yg5_A Putrescine oxidase; oxi 98.7 3.4E-07 1.2E-11 94.1 16.3 70 54-127 4-78 (453)
125 1rsg_A FMS1 protein; FAD bindi 98.7 1.4E-07 4.6E-12 98.9 12.9 41 54-98 7-48 (516)
126 3lxd_A FAD-dependent pyridine 98.7 1.9E-08 6.4E-13 102.4 6.0 37 54-94 8-46 (415)
127 1ebd_A E3BD, dihydrolipoamide 98.6 2.4E-08 8.3E-13 102.9 6.1 33 55-91 3-35 (455)
128 3kd9_A Coenzyme A disulfide re 98.6 6.6E-08 2.2E-12 99.4 9.3 38 55-94 3-40 (449)
129 4b63_A L-ornithine N5 monooxyg 98.6 2.3E-07 7.8E-12 96.6 13.4 68 167-247 141-213 (501)
130 3oc4_A Oxidoreductase, pyridin 98.6 3.9E-08 1.3E-12 101.2 7.5 37 56-94 3-39 (452)
131 4dna_A Probable glutathione re 98.6 1.5E-07 5.2E-12 97.1 11.3 59 171-250 211-270 (463)
132 3klj_A NAD(FAD)-dependent dehy 98.6 8.1E-08 2.8E-12 96.6 8.8 37 54-94 8-44 (385)
133 3sx6_A Sulfide-quinone reducta 98.6 3E-08 1E-12 101.6 5.3 35 56-94 5-42 (437)
134 2bc0_A NADH oxidase; flavoprot 98.6 1.3E-08 4.3E-13 106.0 2.5 37 54-94 34-73 (490)
135 2jae_A L-amino acid oxidase; o 98.6 3.2E-07 1.1E-11 95.4 12.9 41 53-97 9-49 (489)
136 2gqw_A Ferredoxin reductase; f 98.6 4E-08 1.4E-12 99.7 5.6 37 54-94 6-44 (408)
137 3urh_A Dihydrolipoyl dehydroge 98.6 1.2E-07 4.1E-12 98.6 9.1 39 52-94 22-60 (491)
138 2qae_A Lipoamide, dihydrolipoy 98.5 1.1E-07 3.7E-12 98.3 8.5 36 55-94 2-37 (468)
139 1zmd_A Dihydrolipoyl dehydroge 98.5 7.2E-08 2.5E-12 99.9 6.9 37 54-94 5-41 (474)
140 1d5t_A Guanine nucleotide diss 98.5 4.1E-07 1.4E-11 93.0 12.3 58 171-249 234-291 (433)
141 2yqu_A 2-oxoglutarate dehydrog 98.5 1.5E-07 5E-12 97.0 8.6 36 55-94 1-36 (455)
142 3iwa_A FAD-dependent pyridine 98.5 1.3E-07 4.5E-12 97.8 8.2 38 55-94 3-40 (472)
143 3cgb_A Pyridine nucleotide-dis 98.5 3.9E-08 1.3E-12 102.1 4.1 38 55-94 36-73 (480)
144 3h28_A Sulfide-quinone reducta 98.5 2.4E-07 8.2E-12 94.6 9.3 37 56-94 3-39 (430)
145 3h8l_A NADH oxidase; membrane 98.5 6.4E-08 2.2E-12 98.2 4.8 35 56-94 2-39 (409)
146 2v3a_A Rubredoxin reductase; a 98.5 4.8E-07 1.7E-11 90.9 11.2 101 55-250 145-245 (384)
147 3lad_A Dihydrolipoamide dehydr 98.5 1.6E-07 5.4E-12 97.4 7.8 37 54-94 2-38 (476)
148 3ics_A Coenzyme A-disulfide re 98.5 1.8E-07 6.1E-12 99.6 8.3 40 53-94 34-73 (588)
149 4b1b_A TRXR, thioredoxin reduc 98.5 9.9E-07 3.4E-11 92.2 13.5 59 171-250 263-321 (542)
150 3fg2_P Putative rubredoxin red 98.5 9.3E-08 3.2E-12 96.9 5.4 35 56-94 2-38 (404)
151 1xhc_A NADH oxidase /nitrite r 98.5 3E-07 1E-11 91.8 8.8 35 55-94 8-42 (367)
152 1nhp_A NADH peroxidase; oxidor 98.5 5.4E-08 1.8E-12 100.0 3.2 37 56-94 1-37 (447)
153 1zk7_A HGII, reductase, mercur 98.5 2E-07 7E-12 96.2 7.6 35 54-92 3-37 (467)
154 3hyw_A Sulfide-quinone reducta 98.4 3.4E-07 1.2E-11 93.5 8.9 35 57-93 4-38 (430)
155 2cdu_A NADPH oxidase; flavoenz 98.4 5.3E-08 1.8E-12 100.2 2.8 37 56-94 1-37 (452)
156 2yqu_A 2-oxoglutarate dehydrog 98.4 5E-07 1.7E-11 93.0 10.1 100 55-250 167-266 (455)
157 3dgz_A Thioredoxin reductase 2 98.4 5.3E-07 1.8E-11 93.7 9.9 35 54-92 5-39 (488)
158 3ef6_A Toluene 1,2-dioxygenase 98.4 3.1E-07 1E-11 93.2 7.9 35 56-94 3-39 (410)
159 3dk9_A Grase, GR, glutathione 98.4 2.3E-07 7.8E-12 96.2 6.9 36 53-92 18-53 (478)
160 3fpz_A Thiazole biosynthetic e 98.4 3.5E-07 1.2E-11 89.8 7.8 68 54-126 64-131 (326)
161 1mo9_A ORF3; nucleotide bindin 98.4 3.9E-07 1.3E-11 95.5 8.3 40 51-94 39-78 (523)
162 2hqm_A GR, grase, glutathione 98.4 3.7E-07 1.3E-11 94.6 8.0 36 53-92 9-44 (479)
163 2eq6_A Pyruvate dehydrogenase 98.4 1.2E-06 4E-11 90.4 11.6 100 55-250 169-273 (464)
164 3g5s_A Methylenetetrahydrofola 98.4 1.7E-06 5.7E-11 85.1 11.6 115 56-198 2-124 (443)
165 3k30_A Histamine dehydrogenase 98.4 3.1E-07 1.1E-11 99.5 7.0 41 51-95 387-427 (690)
166 1ges_A Glutathione reductase; 98.4 8.7E-07 3E-11 91.0 9.6 101 55-250 167-267 (450)
167 1m6i_A Programmed cell death p 98.4 9.1E-08 3.1E-12 99.5 2.2 41 52-94 8-48 (493)
168 2v3a_A Rubredoxin reductase; a 98.4 2.5E-07 8.4E-12 93.1 5.2 37 54-92 3-39 (384)
169 3dgh_A TRXR-1, thioredoxin red 98.4 1.8E-06 6E-11 89.6 11.7 35 53-91 7-41 (483)
170 1xdi_A RV3303C-LPDA; reductase 98.4 7.2E-07 2.5E-11 92.9 8.8 36 55-92 2-38 (499)
171 2eq6_A Pyruvate dehydrogenase 98.3 4.7E-07 1.6E-11 93.4 7.2 34 55-92 6-39 (464)
172 2r9z_A Glutathione amide reduc 98.3 1.3E-06 4.4E-11 90.1 10.1 35 54-92 3-37 (463)
173 1b37_A Protein (polyamine oxid 98.3 8.4E-07 2.9E-11 91.7 8.6 40 54-97 3-43 (472)
174 1ges_A Glutathione reductase; 98.3 1.5E-06 5E-11 89.4 10.2 35 54-92 3-37 (450)
175 1y56_A Hypothetical protein PH 98.3 9.5E-07 3.2E-11 91.8 8.6 36 54-94 107-142 (493)
176 3vrd_B FCCB subunit, flavocyto 98.3 1.6E-06 5.5E-11 87.5 10.0 35 57-93 4-38 (401)
177 3ic9_A Dihydrolipoamide dehydr 98.3 1.4E-07 4.8E-12 98.1 2.1 34 55-92 8-41 (492)
178 1fec_A Trypanothione reductase 98.3 2E-06 6.7E-11 89.3 10.7 33 54-90 2-35 (490)
179 3ntd_A FAD-dependent pyridine 98.3 8.4E-07 2.9E-11 93.9 8.0 37 56-94 2-38 (565)
180 2r9z_A Glutathione amide reduc 98.3 2E-06 6.9E-11 88.6 10.2 100 55-250 166-266 (463)
181 1onf_A GR, grase, glutathione 98.2 5.2E-07 1.8E-11 94.0 4.8 34 55-92 2-35 (500)
182 1nhp_A NADH peroxidase; oxidor 98.2 7.5E-06 2.6E-10 83.9 13.1 101 54-250 148-248 (447)
183 2wpf_A Trypanothione reductase 98.2 1.2E-06 4.1E-11 91.1 7.0 33 54-90 6-39 (495)
184 1lvl_A Dihydrolipoamide dehydr 98.2 2.5E-06 8.5E-11 87.8 8.1 34 54-91 4-37 (458)
185 3ef6_A Toluene 1,2-dioxygenase 98.2 8.5E-06 2.9E-10 82.5 11.4 108 55-257 143-252 (410)
186 3lxd_A FAD-dependent pyridine 98.1 1.1E-05 3.8E-10 81.8 11.5 101 55-249 152-252 (415)
187 2x8g_A Thioredoxin glutathione 98.1 8.2E-06 2.8E-10 86.9 10.9 35 53-91 105-139 (598)
188 1ebd_A E3BD, dihydrolipoamide 98.1 6.3E-06 2.2E-10 84.7 9.6 100 55-250 170-272 (455)
189 2bcg_G Secretory pathway GDP d 98.1 1.8E-06 6.2E-11 88.7 5.5 42 52-97 8-49 (453)
190 2hqm_A GR, grase, glutathione 98.1 8.3E-06 2.8E-10 84.4 10.4 102 55-250 185-287 (479)
191 1onf_A GR, grase, glutathione 98.1 1.5E-05 5.2E-10 82.9 12.2 101 55-250 176-277 (500)
192 1xdi_A RV3303C-LPDA; reductase 98.1 1E-05 3.5E-10 84.2 10.8 100 55-250 182-281 (499)
193 3fg2_P Putative rubredoxin red 98.1 2.2E-05 7.5E-10 79.3 12.9 108 56-257 143-252 (404)
194 2gag_A Heterotetrameric sarcos 98.1 6.2E-06 2.1E-10 92.4 9.6 36 55-94 128-163 (965)
195 1v59_A Dihydrolipoamide dehydr 98.1 9E-06 3.1E-10 84.1 10.1 102 55-250 183-289 (478)
196 1mo9_A ORF3; nucleotide bindin 98.1 9E-06 3.1E-10 85.1 10.2 100 56-250 215-318 (523)
197 1sez_A Protoporphyrinogen oxid 98.1 6.7E-06 2.3E-10 85.6 8.9 73 53-129 11-88 (504)
198 4eqs_A Coenzyme A disulfide re 98.1 7.3E-06 2.5E-10 83.7 8.8 36 57-94 2-37 (437)
199 2qae_A Lipoamide, dihydrolipoy 98.1 1.8E-05 6E-10 81.6 11.7 100 55-250 174-278 (468)
200 2e1m_A L-glutamate oxidase; L- 98.1 3.4E-06 1.2E-10 83.8 5.8 40 52-95 41-81 (376)
201 1ojt_A Surface protein; redox- 98.1 8.2E-06 2.8E-10 84.5 9.0 100 55-250 185-288 (482)
202 1zmd_A Dihydrolipoyl dehydroge 98.0 2.8E-05 9.5E-10 80.3 12.8 101 55-250 178-284 (474)
203 1fec_A Trypanothione reductase 98.0 3.3E-05 1.1E-09 80.1 12.3 104 55-250 187-290 (490)
204 2b9w_A Putative aminooxidase; 98.0 4.8E-06 1.6E-10 84.7 5.7 40 54-97 5-45 (424)
205 1xhc_A NADH oxidase /nitrite r 98.0 1.3E-05 4.3E-10 80.0 8.6 93 56-250 144-236 (367)
206 2gqw_A Ferredoxin reductase; f 98.0 2.9E-05 1E-09 78.4 11.4 96 55-249 145-240 (408)
207 2a8x_A Dihydrolipoyl dehydroge 98.0 2.2E-05 7.5E-10 80.9 10.6 100 55-250 171-273 (464)
208 1lvl_A Dihydrolipoamide dehydr 98.0 1.2E-05 4.2E-10 82.6 8.6 98 55-250 171-270 (458)
209 3iwa_A FAD-dependent pyridine 98.0 3.4E-05 1.2E-09 79.6 11.9 101 55-249 159-259 (472)
210 1dxl_A Dihydrolipoamide dehydr 98.0 1.1E-05 3.8E-10 83.2 8.3 100 55-250 177-281 (470)
211 3oc4_A Oxidoreductase, pyridin 98.0 4.5E-05 1.5E-09 78.2 12.8 99 55-249 147-245 (452)
212 4g6h_A Rotenone-insensitive NA 98.0 4.4E-05 1.5E-09 79.3 12.7 38 52-93 39-76 (502)
213 2cdu_A NADPH oxidase; flavoenz 98.0 5.9E-05 2E-09 77.3 13.6 100 55-250 149-249 (452)
214 2wpf_A Trypanothione reductase 98.0 2.6E-05 8.9E-10 80.9 10.8 104 55-250 191-294 (495)
215 1trb_A Thioredoxin reductase; 98.0 6.9E-05 2.4E-09 72.7 13.3 98 55-249 145-248 (320)
216 1q1r_A Putidaredoxin reductase 98.0 3.7E-05 1.3E-09 78.3 11.5 103 55-249 149-251 (431)
217 1zk7_A HGII, reductase, mercur 98.0 2.7E-05 9.1E-10 80.3 10.5 98 55-250 176-273 (467)
218 1v0j_A UDP-galactopyranose mut 97.9 4.9E-06 1.7E-10 84.0 4.7 42 53-97 5-46 (399)
219 3hdq_A UDP-galactopyranose mut 97.9 6.3E-06 2.2E-10 82.6 5.4 40 52-95 26-65 (397)
220 3ntd_A FAD-dependent pyridine 97.9 3.6E-05 1.2E-09 81.3 11.4 117 56-249 152-268 (565)
221 3cgb_A Pyridine nucleotide-dis 97.9 4.6E-05 1.6E-09 78.8 11.7 99 54-249 185-283 (480)
222 3ic9_A Dihydrolipoamide dehydr 97.9 4.2E-05 1.4E-09 79.3 11.4 98 55-249 174-275 (492)
223 2bc0_A NADH oxidase; flavoprot 97.9 6.8E-05 2.3E-09 77.7 12.8 99 55-249 194-292 (490)
224 3urh_A Dihydrolipoyl dehydroge 97.9 2.9E-05 1E-09 80.5 9.8 100 55-250 198-302 (491)
225 1m6i_A Programmed cell death p 97.9 7.9E-05 2.7E-09 77.3 12.8 103 56-249 181-283 (493)
226 3lad_A Dihydrolipoamide dehydr 97.9 5.4E-05 1.8E-09 78.2 10.8 100 55-250 180-282 (476)
227 2zbw_A Thioredoxin reductase; 97.8 0.00012 4E-09 71.6 12.4 36 55-94 152-187 (335)
228 2bi7_A UDP-galactopyranose mut 97.8 1.7E-05 5.8E-10 79.5 5.7 37 55-95 3-39 (384)
229 1i8t_A UDP-galactopyranose mut 97.8 1.4E-05 4.6E-10 79.7 4.8 37 56-96 2-38 (367)
230 3pl8_A Pyranose 2-oxidase; sub 97.8 1.5E-05 5E-10 85.0 5.0 39 53-95 44-82 (623)
231 4eqs_A Coenzyme A disulfide re 97.8 7.5E-05 2.6E-09 76.2 9.9 93 56-248 148-240 (437)
232 3ics_A Coenzyme A-disulfide re 97.7 8.6E-05 3E-09 78.8 10.4 97 55-249 187-283 (588)
233 3dk9_A Grase, GR, glutathione 97.7 0.00011 3.8E-09 75.8 10.9 101 55-249 187-294 (478)
234 4dsg_A UDP-galactopyranose mut 97.7 1.9E-05 6.4E-10 81.8 5.1 40 53-96 7-47 (484)
235 2iid_A L-amino-acid oxidase; f 97.7 1.9E-05 6.6E-10 82.0 5.1 40 53-96 31-70 (498)
236 3itj_A Thioredoxin reductase 1 97.7 0.00011 3.9E-09 71.7 10.2 36 55-94 173-208 (338)
237 2vdc_G Glutamate synthase [NAD 97.7 2.2E-05 7.7E-10 80.4 5.1 38 53-94 120-157 (456)
238 3dgh_A TRXR-1, thioredoxin red 97.7 0.00018 6.2E-09 74.4 11.7 99 55-249 187-290 (483)
239 3s5w_A L-ornithine 5-monooxyge 97.7 0.00012 4.3E-09 75.1 10.1 38 55-94 227-264 (463)
240 3d1c_A Flavin-containing putat 97.7 0.00023 7.9E-09 70.5 11.5 106 56-249 167-273 (369)
241 3ab1_A Ferredoxin--NADP reduct 97.7 0.00016 5.4E-09 71.6 10.1 36 55-94 163-198 (360)
242 2q0l_A TRXR, thioredoxin reduc 97.6 0.00046 1.6E-08 66.5 12.5 36 55-94 143-178 (311)
243 2q7v_A Thioredoxin reductase; 97.6 0.00061 2.1E-08 66.2 12.8 35 56-94 153-187 (325)
244 3t37_A Probable dehydrogenase; 97.6 4.6E-05 1.6E-09 79.7 4.9 38 54-94 16-53 (526)
245 1kdg_A CDH, cellobiose dehydro 97.5 5.1E-05 1.7E-09 79.8 4.8 37 53-93 5-41 (546)
246 3kd9_A Coenzyme A disulfide re 97.5 0.0004 1.4E-08 71.0 11.3 97 56-249 149-245 (449)
247 3cty_A Thioredoxin reductase; 97.5 0.00053 1.8E-08 66.4 11.4 35 56-94 156-190 (319)
248 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00012 4E-09 79.0 7.3 38 53-94 371-408 (671)
249 1o94_A Tmadh, trimethylamine d 97.5 8.1E-05 2.8E-09 81.0 5.8 38 53-94 387-424 (729)
250 4g6h_A Rotenone-insensitive NA 97.5 0.00024 8.2E-09 73.7 8.9 55 172-247 273-331 (502)
251 2z3y_A Lysine-specific histone 97.5 9.4E-05 3.2E-09 79.6 5.9 40 53-96 105-144 (662)
252 3dgz_A Thioredoxin reductase 2 97.5 0.00033 1.1E-08 72.5 9.9 99 55-249 185-288 (488)
253 1fl2_A Alkyl hydroperoxide red 97.5 0.00059 2E-08 65.7 11.0 35 56-94 145-179 (310)
254 3l8k_A Dihydrolipoyl dehydroge 97.4 0.00043 1.5E-08 71.1 10.2 98 55-250 172-274 (466)
255 2xag_A Lysine-specific histone 97.4 0.00012 4.1E-09 80.3 6.3 40 53-96 276-315 (852)
256 3qvp_A Glucose oxidase; oxidor 97.4 8.9E-05 3E-09 78.1 5.0 37 53-92 17-53 (583)
257 3r9u_A Thioredoxin reductase; 97.4 0.00097 3.3E-08 64.2 11.5 36 55-94 147-182 (315)
258 3q9t_A Choline dehydrogenase a 97.4 0.00014 4.7E-09 76.6 5.3 37 54-93 5-41 (577)
259 1vdc_A NTR, NADPH dependent th 97.4 0.00089 3E-08 65.2 10.9 36 55-94 159-194 (333)
260 3f8d_A Thioredoxin reductase ( 97.3 0.00097 3.3E-08 64.4 10.4 36 55-94 154-189 (323)
261 1cjc_A Protein (adrenodoxin re 97.3 0.00015 5.2E-09 74.4 4.5 39 54-94 5-43 (460)
262 3uox_A Otemo; baeyer-villiger 97.3 0.00099 3.4E-08 69.8 10.7 35 55-93 185-219 (545)
263 3fbs_A Oxidoreductase; structu 97.3 0.00069 2.4E-08 64.6 8.7 33 55-92 141-173 (297)
264 1lqt_A FPRA; NADP+ derivative, 97.2 0.00012 3.9E-09 75.1 3.1 39 54-94 2-45 (456)
265 1ju2_A HydroxynitrIle lyase; f 97.2 0.00013 4.3E-09 76.5 3.4 37 53-94 24-60 (536)
266 3lzw_A Ferredoxin--NADP reduct 97.2 0.0011 3.8E-08 64.3 10.0 36 55-94 154-189 (332)
267 3gwf_A Cyclohexanone monooxyge 97.2 0.0017 5.7E-08 67.9 11.8 35 55-93 178-212 (540)
268 2a87_A TRXR, TR, thioredoxin r 97.2 0.0013 4.3E-08 64.3 10.1 36 55-94 155-190 (335)
269 3qfa_A Thioredoxin reductase 1 97.2 0.0011 3.7E-08 69.1 9.9 32 56-91 211-242 (519)
270 3fim_B ARYL-alcohol oxidase; A 97.2 0.00017 5.7E-09 75.8 3.6 37 55-94 2-38 (566)
271 2x8g_A Thioredoxin glutathione 97.2 0.0013 4.5E-08 69.8 10.5 32 56-91 287-318 (598)
272 1gte_A Dihydropyrimidine dehyd 97.2 0.00022 7.7E-09 80.4 4.7 37 54-94 186-223 (1025)
273 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00021 7E-09 76.5 3.5 36 55-94 56-100 (721)
274 1gpe_A Protein (glucose oxidas 97.1 0.00052 1.8E-08 72.6 6.1 39 53-94 22-60 (587)
275 2jbv_A Choline oxidase; alcoho 97.0 0.00052 1.8E-08 72.0 5.4 38 54-94 12-49 (546)
276 1n4w_A CHOD, cholesterol oxida 97.0 0.00037 1.3E-08 72.4 4.1 36 54-93 4-39 (504)
277 1coy_A Cholesterol oxidase; ox 97.0 0.00044 1.5E-08 71.8 4.6 37 53-93 9-45 (507)
278 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.0032 1.1E-07 65.5 10.5 36 55-94 355-390 (521)
279 3klj_A NAD(FAD)-dependent dehy 96.9 0.00074 2.5E-08 67.5 4.8 35 56-94 147-181 (385)
280 1cjc_A Protein (adrenodoxin re 96.8 0.0045 1.5E-07 63.3 10.2 36 55-94 145-201 (460)
281 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0026 9E-08 64.8 7.0 34 55-92 212-246 (447)
282 1ps9_A 2,4-dienoyl-COA reducta 96.6 0.0063 2.1E-07 65.5 10.2 50 175-248 577-628 (671)
283 4ap3_A Steroid monooxygenase; 96.6 0.0038 1.3E-07 65.3 8.2 35 55-93 191-225 (549)
284 2xve_A Flavin-containing monoo 96.6 0.005 1.7E-07 63.1 8.6 36 55-94 197-232 (464)
285 1o94_A Tmadh, trimethylamine d 96.5 0.0048 1.6E-07 67.0 8.7 35 55-94 528-564 (729)
286 1lqt_A FPRA; NADP+ derivative, 96.5 0.005 1.7E-07 62.9 8.4 40 55-94 147-203 (456)
287 1vg0_A RAB proteins geranylger 96.5 0.0021 7.1E-08 67.9 5.5 41 52-96 5-45 (650)
288 2gag_A Heterotetrameric sarcos 96.3 0.0057 2E-07 68.5 7.4 35 56-94 285-319 (965)
289 2vdc_G Glutamate synthase [NAD 95.9 0.013 4.3E-07 59.9 7.3 36 55-94 264-300 (456)
290 3fwz_A Inner membrane protein 95.8 0.0084 2.9E-07 50.3 4.7 36 54-93 6-41 (140)
291 4a9w_A Monooxygenase; baeyer-v 95.7 0.016 5.5E-07 56.4 7.2 33 55-92 163-195 (357)
292 3h8l_A NADH oxidase; membrane 95.7 0.029 1E-06 56.2 9.2 51 173-248 220-270 (409)
293 2g1u_A Hypothetical protein TM 95.7 0.011 3.7E-07 50.6 4.9 36 54-93 18-53 (155)
294 1gte_A Dihydropyrimidine dehyd 95.5 0.056 1.9E-06 60.9 11.1 33 56-92 333-366 (1025)
295 4gcm_A TRXR, thioredoxin reduc 95.2 0.019 6.4E-07 55.1 5.3 35 56-94 146-180 (312)
296 1lss_A TRK system potassium up 95.2 0.018 6.3E-07 47.7 4.6 33 56-92 5-37 (140)
297 3sx6_A Sulfide-quinone reducta 94.9 0.041 1.4E-06 55.6 7.1 50 175-247 212-268 (437)
298 1id1_A Putative potassium chan 94.9 0.027 9.2E-07 47.9 4.9 34 55-92 3-36 (153)
299 3ic5_A Putative saccharopine d 94.9 0.03 1E-06 44.8 4.9 33 56-92 6-39 (118)
300 3h28_A Sulfide-quinone reducta 94.8 0.048 1.6E-06 55.1 7.4 51 175-248 204-256 (430)
301 1w4x_A Phenylacetone monooxyge 94.6 0.015 5.2E-07 60.7 3.1 36 55-94 186-221 (542)
302 3llv_A Exopolyphosphatase-rela 94.5 0.024 8.3E-07 47.3 3.6 34 56-93 7-40 (141)
303 4a5l_A Thioredoxin reductase; 94.4 0.044 1.5E-06 52.4 5.6 36 55-94 152-187 (314)
304 4b63_A L-ornithine N5 monooxyg 94.2 0.11 3.7E-06 53.6 8.6 37 55-93 246-282 (501)
305 3k96_A Glycerol-3-phosphate de 94.2 0.042 1.4E-06 53.9 5.1 38 51-92 25-62 (356)
306 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.052 1.8E-06 51.9 5.3 34 56-93 16-49 (302)
307 1pzg_A LDH, lactate dehydrogen 93.8 0.057 1.9E-06 52.4 5.1 36 54-93 8-44 (331)
308 4g65_A TRK system potassium up 93.6 0.047 1.6E-06 55.6 4.2 36 54-93 2-37 (461)
309 3l4b_C TRKA K+ channel protien 93.4 0.042 1.4E-06 49.7 3.2 34 56-93 1-34 (218)
310 4fk1_A Putative thioredoxin re 93.3 0.25 8.7E-06 46.9 8.8 33 56-92 147-180 (304)
311 4dio_A NAD(P) transhydrogenase 93.3 0.077 2.6E-06 52.6 5.1 36 54-93 189-224 (405)
312 2hmt_A YUAA protein; RCK, KTN, 93.3 0.058 2E-06 44.8 3.6 33 56-92 7-39 (144)
313 3c85_A Putative glutathione-re 93.2 0.07 2.4E-06 46.7 4.3 35 55-93 39-74 (183)
314 3i83_A 2-dehydropantoate 2-red 92.9 0.083 2.8E-06 51.0 4.7 33 56-92 3-35 (320)
315 4e12_A Diketoreductase; oxidor 92.9 0.1 3.5E-06 49.3 5.1 34 56-93 5-38 (283)
316 3dfz_A SIRC, precorrin-2 dehyd 92.6 0.11 3.8E-06 47.1 4.7 35 54-92 30-64 (223)
317 2ewd_A Lactate dehydrogenase,; 92.4 0.11 3.8E-06 50.0 4.7 35 55-93 4-39 (317)
318 1sez_A Protoporphyrinogen oxid 92.3 0.79 2.7E-05 46.9 11.5 34 394-433 461-494 (504)
319 3ado_A Lambda-crystallin; L-gu 92.3 0.084 2.9E-06 50.7 3.7 34 56-93 7-40 (319)
320 3p2y_A Alanine dehydrogenase/p 92.2 0.094 3.2E-06 51.5 4.0 36 54-93 183-218 (381)
321 2y0c_A BCEC, UDP-glucose dehyd 92.1 0.12 4E-06 52.9 4.8 35 54-92 7-41 (478)
322 1bg6_A N-(1-D-carboxylethyl)-L 92.1 0.13 4.3E-06 50.4 4.8 34 55-92 4-37 (359)
323 3k6j_A Protein F01G10.3, confi 92.0 0.27 9.2E-06 49.7 7.2 34 56-93 55-88 (460)
324 1ks9_A KPA reductase;, 2-dehyd 92.0 0.14 4.7E-06 48.3 4.9 33 57-93 2-34 (291)
325 1kyq_A Met8P, siroheme biosynt 92.0 0.093 3.2E-06 49.1 3.5 34 55-92 13-46 (274)
326 3qha_A Putative oxidoreductase 92.0 0.13 4.3E-06 49.1 4.5 36 55-94 15-50 (296)
327 2x5o_A UDP-N-acetylmuramoylala 91.9 0.11 3.6E-06 52.7 4.2 35 56-94 6-40 (439)
328 2raf_A Putative dinucleotide-b 91.9 0.16 5.5E-06 45.5 4.9 36 54-93 18-53 (209)
329 3hn2_A 2-dehydropantoate 2-red 91.8 0.1 3.6E-06 50.1 3.8 33 56-92 3-35 (312)
330 3tl2_A Malate dehydrogenase; c 91.8 0.16 5.4E-06 48.8 5.0 36 53-92 6-42 (315)
331 1lld_A L-lactate dehydrogenase 91.8 0.14 4.8E-06 49.3 4.8 34 55-92 7-42 (319)
332 3lk7_A UDP-N-acetylmuramoylala 91.8 0.14 4.7E-06 52.0 4.8 34 55-92 9-42 (451)
333 2hjr_A Malate dehydrogenase; m 91.7 0.17 5.8E-06 49.0 5.1 34 56-93 15-49 (328)
334 1t2d_A LDH-P, L-lactate dehydr 91.6 0.18 6.2E-06 48.6 5.3 35 55-93 4-39 (322)
335 3gg2_A Sugar dehydrogenase, UD 91.5 0.16 5.3E-06 51.5 4.8 34 56-93 3-36 (450)
336 3ghy_A Ketopantoate reductase 91.5 0.14 4.9E-06 49.7 4.4 32 56-91 4-35 (335)
337 3oj0_A Glutr, glutamyl-tRNA re 91.4 0.12 4E-06 43.3 3.2 34 55-92 21-54 (144)
338 2dpo_A L-gulonate 3-dehydrogen 91.3 0.13 4.4E-06 49.6 3.8 34 56-93 7-40 (319)
339 3vtf_A UDP-glucose 6-dehydroge 91.3 0.19 6.4E-06 50.5 5.0 36 54-93 20-55 (444)
340 2ew2_A 2-dehydropantoate 2-red 91.3 0.17 5.9E-06 48.3 4.7 33 56-92 4-36 (316)
341 3eag_A UDP-N-acetylmuramate:L- 91.2 0.29 9.9E-06 47.2 6.3 34 56-93 5-39 (326)
342 3doj_A AT3G25530, dehydrogenas 91.2 0.19 6.6E-06 48.1 5.0 35 55-93 21-55 (310)
343 4a7p_A UDP-glucose dehydrogena 91.1 0.19 6.5E-06 50.7 5.0 37 54-94 7-43 (446)
344 3pid_A UDP-glucose 6-dehydroge 91.1 0.21 7.1E-06 50.1 5.2 35 54-93 35-69 (432)
345 1x13_A NAD(P) transhydrogenase 91.0 0.19 6.4E-06 50.1 4.8 35 55-93 172-206 (401)
346 1l7d_A Nicotinamide nucleotide 90.8 0.23 7.8E-06 49.2 5.2 36 54-93 171-206 (384)
347 3g0o_A 3-hydroxyisobutyrate de 90.8 0.21 7.3E-06 47.6 4.8 34 55-92 7-40 (303)
348 3gvi_A Malate dehydrogenase; N 90.7 0.25 8.4E-06 47.6 5.1 36 54-93 6-42 (324)
349 2v6b_A L-LDH, L-lactate dehydr 90.7 0.21 7.1E-06 47.7 4.6 32 57-92 2-35 (304)
350 4e21_A 6-phosphogluconate dehy 90.7 0.22 7.4E-06 48.8 4.8 38 52-93 19-56 (358)
351 2qyt_A 2-dehydropantoate 2-red 90.5 0.17 5.7E-06 48.5 3.8 32 55-90 8-45 (317)
352 1guz_A Malate dehydrogenase; o 90.5 0.24 8.4E-06 47.4 4.9 35 57-93 2-36 (310)
353 3ego_A Probable 2-dehydropanto 90.5 0.26 8.8E-06 47.2 5.1 32 56-92 3-34 (307)
354 4b1b_A TRXR, thioredoxin reduc 90.4 0.2 6.8E-06 52.0 4.4 36 55-94 223-258 (542)
355 1zej_A HBD-9, 3-hydroxyacyl-CO 90.2 0.24 8.1E-06 47.0 4.5 35 54-93 11-45 (293)
356 1evy_A Glycerol-3-phosphate de 90.2 0.28 9.7E-06 48.1 5.2 32 57-92 17-48 (366)
357 1pjc_A Protein (L-alanine dehy 90.2 0.23 8E-06 48.7 4.6 33 56-92 168-200 (361)
358 3l9w_A Glutathione-regulated p 90.2 0.18 6.3E-06 50.4 3.8 35 55-93 4-38 (413)
359 2uyy_A N-PAC protein; long-cha 90.1 0.27 9.2E-06 47.1 4.9 35 55-93 30-64 (316)
360 3g17_A Similar to 2-dehydropan 90.1 0.14 4.8E-06 48.7 2.9 33 56-92 3-35 (294)
361 3pef_A 6-phosphogluconate dehy 90.1 0.24 8.3E-06 46.8 4.5 34 56-93 2-35 (287)
362 2bcg_G Secretory pathway GDP d 90.1 0.32 1.1E-05 49.3 5.6 57 171-249 242-301 (453)
363 1y6j_A L-lactate dehydrogenase 90.0 0.27 9.3E-06 47.2 4.8 36 54-93 6-43 (318)
364 1jw9_B Molybdopterin biosynthe 90.0 0.21 7.3E-06 46.2 3.9 33 56-92 32-65 (249)
365 3g79_A NDP-N-acetyl-D-galactos 89.9 0.26 8.9E-06 50.1 4.7 36 55-93 18-54 (478)
366 1zcj_A Peroxisomal bifunctiona 89.7 0.38 1.3E-05 48.9 5.8 33 56-92 38-70 (463)
367 3p7m_A Malate dehydrogenase; p 89.7 0.35 1.2E-05 46.5 5.3 35 55-93 5-40 (321)
368 3l6d_A Putative oxidoreductase 89.7 0.36 1.2E-05 46.0 5.4 35 54-92 8-42 (306)
369 2a9f_A Putative malic enzyme ( 89.6 0.25 8.6E-06 48.4 4.1 37 53-93 186-223 (398)
370 1z82_A Glycerol-3-phosphate de 89.5 0.3 1E-05 47.3 4.8 35 54-92 13-47 (335)
371 4dll_A 2-hydroxy-3-oxopropiona 89.5 0.28 9.7E-06 47.2 4.5 36 54-93 30-65 (320)
372 3pqe_A L-LDH, L-lactate dehydr 89.5 0.29 9.9E-06 47.1 4.5 35 54-92 4-40 (326)
373 1mv8_A GMD, GDP-mannose 6-dehy 89.5 0.24 8.3E-06 49.9 4.1 32 57-92 2-33 (436)
374 3dtt_A NADP oxidoreductase; st 89.4 0.33 1.1E-05 44.6 4.7 36 54-93 18-53 (245)
375 3hwr_A 2-dehydropantoate 2-red 89.1 0.32 1.1E-05 46.8 4.6 33 55-92 19-51 (318)
376 1ur5_A Malate dehydrogenase; o 89.1 0.37 1.3E-05 46.1 5.0 33 56-92 3-36 (309)
377 2izz_A Pyrroline-5-carboxylate 89.0 0.32 1.1E-05 46.9 4.4 37 53-93 20-60 (322)
378 2aef_A Calcium-gated potassium 88.8 0.24 8.1E-06 45.2 3.3 34 55-93 9-42 (234)
379 2vns_A Metalloreductase steap3 88.8 0.34 1.2E-05 43.6 4.3 33 56-92 29-61 (215)
380 2eez_A Alanine dehydrogenase; 88.8 0.38 1.3E-05 47.3 4.9 34 55-92 166-199 (369)
381 4ezb_A Uncharacterized conserv 88.7 0.37 1.3E-05 46.3 4.7 34 56-93 25-59 (317)
382 3dfu_A Uncharacterized protein 88.6 0.13 4.6E-06 46.8 1.4 32 55-90 6-37 (232)
383 3o0h_A Glutathione reductase; 88.3 0.41 1.4E-05 48.9 4.9 36 55-94 191-226 (484)
384 3ggo_A Prephenate dehydrogenas 88.2 0.52 1.8E-05 45.2 5.3 34 55-92 33-68 (314)
385 2vhw_A Alanine dehydrogenase; 88.1 0.44 1.5E-05 47.0 4.9 34 55-92 168-201 (377)
386 1vpd_A Tartronate semialdehyde 88.0 0.37 1.3E-05 45.7 4.1 33 56-92 6-38 (299)
387 4dna_A Probable glutathione re 88.0 0.44 1.5E-05 48.4 4.9 36 55-94 170-205 (463)
388 1oju_A MDH, malate dehydrogena 88.0 0.35 1.2E-05 45.8 3.9 33 56-92 1-35 (294)
389 3cky_A 2-hydroxymethyl glutara 88.0 0.38 1.3E-05 45.6 4.2 34 55-92 4-37 (301)
390 1jay_A Coenzyme F420H2:NADP+ o 88.0 0.52 1.8E-05 42.0 4.9 32 57-92 2-34 (212)
391 1txg_A Glycerol-3-phosphate de 87.8 0.33 1.1E-05 46.8 3.8 30 57-90 2-31 (335)
392 1vl6_A Malate oxidoreductase; 87.7 0.4 1.4E-05 46.9 4.1 36 53-92 190-226 (388)
393 3c7a_A Octopine dehydrogenase; 87.6 0.46 1.6E-05 47.3 4.7 32 56-90 3-34 (404)
394 3phh_A Shikimate dehydrogenase 87.5 0.55 1.9E-05 43.8 4.8 35 55-93 118-152 (269)
395 2rcy_A Pyrroline carboxylate r 87.4 0.43 1.5E-05 44.2 4.1 35 55-93 4-42 (262)
396 1a5z_A L-lactate dehydrogenase 87.4 0.39 1.3E-05 46.1 3.9 32 57-92 2-35 (319)
397 3d0o_A L-LDH 1, L-lactate dehy 87.4 0.47 1.6E-05 45.6 4.4 35 54-92 5-41 (317)
398 4huj_A Uncharacterized protein 87.4 0.26 8.8E-06 44.6 2.5 34 56-93 24-58 (220)
399 1dlj_A UDP-glucose dehydrogena 87.3 0.54 1.9E-05 46.8 5.0 31 57-92 2-32 (402)
400 2f1k_A Prephenate dehydrogenas 87.2 0.53 1.8E-05 44.1 4.7 32 57-92 2-33 (279)
401 3abi_A Putative uncharacterize 87.2 0.56 1.9E-05 46.0 5.0 38 50-92 11-48 (365)
402 1x0v_A GPD-C, GPDH-C, glycerol 87.2 0.35 1.2E-05 47.1 3.5 35 55-93 8-49 (354)
403 3mog_A Probable 3-hydroxybutyr 87.2 0.48 1.7E-05 48.3 4.6 34 56-93 6-39 (483)
404 2pv7_A T-protein [includes: ch 87.1 0.74 2.5E-05 43.7 5.7 33 56-92 22-55 (298)
405 1nyt_A Shikimate 5-dehydrogena 87.0 0.6 2.1E-05 43.6 4.9 34 55-92 119-152 (271)
406 3ktd_A Prephenate dehydrogenas 86.9 0.58 2E-05 45.4 4.8 34 55-92 8-41 (341)
407 2i6t_A Ubiquitin-conjugating e 86.9 0.46 1.6E-05 45.2 4.1 34 56-93 15-50 (303)
408 3qsg_A NAD-binding phosphogluc 86.9 0.43 1.5E-05 45.7 3.9 34 55-92 24-58 (312)
409 3nep_X Malate dehydrogenase; h 86.9 0.48 1.6E-05 45.3 4.2 34 56-93 1-36 (314)
410 3e8x_A Putative NAD-dependent 86.8 0.56 1.9E-05 42.5 4.5 36 54-93 20-56 (236)
411 3pdu_A 3-hydroxyisobutyrate de 86.8 0.31 1.1E-05 46.0 2.8 33 57-93 3-35 (287)
412 2egg_A AROE, shikimate 5-dehyd 86.8 0.7 2.4E-05 43.8 5.2 34 55-92 141-175 (297)
413 2q3e_A UDP-glucose 6-dehydroge 86.7 0.43 1.5E-05 48.5 4.0 36 56-93 6-41 (467)
414 2h78_A Hibadh, 3-hydroxyisobut 86.7 0.5 1.7E-05 44.9 4.2 33 56-92 4-36 (302)
415 1pjq_A CYSG, siroheme synthase 86.7 0.54 1.8E-05 47.7 4.6 34 55-92 12-45 (457)
416 4ffl_A PYLC; amino acid, biosy 86.5 0.62 2.1E-05 45.5 4.9 34 57-94 3-36 (363)
417 1ez4_A Lactate dehydrogenase; 86.5 0.53 1.8E-05 45.2 4.3 35 54-92 4-40 (318)
418 4gwg_A 6-phosphogluconate dehy 86.5 0.58 2E-05 47.6 4.7 35 55-93 4-38 (484)
419 2zyd_A 6-phosphogluconate dehy 86.4 0.6 2E-05 47.6 4.8 36 54-93 14-49 (480)
420 2o3j_A UDP-glucose 6-dehydroge 86.3 0.52 1.8E-05 48.1 4.3 36 56-93 10-45 (481)
421 1yqg_A Pyrroline-5-carboxylate 86.2 0.52 1.8E-05 43.7 4.0 32 57-92 2-34 (263)
422 3ond_A Adenosylhomocysteinase; 86.0 0.51 1.8E-05 47.7 4.0 35 54-92 264-298 (488)
423 2z3y_A Lysine-specific histone 86.0 11 0.00037 40.0 14.6 37 394-433 623-659 (662)
424 3orq_A N5-carboxyaminoimidazol 86.0 0.99 3.4E-05 44.4 6.1 36 54-93 11-46 (377)
425 3ius_A Uncharacterized conserv 85.9 0.66 2.3E-05 43.4 4.6 34 56-93 6-39 (286)
426 3vku_A L-LDH, L-lactate dehydr 85.9 0.63 2.1E-05 44.8 4.4 35 54-92 8-44 (326)
427 1ldn_A L-lactate dehydrogenase 85.8 0.66 2.3E-05 44.5 4.6 36 55-92 6-41 (316)
428 1hyh_A L-hicdh, L-2-hydroxyiso 85.8 0.54 1.9E-05 44.9 3.9 33 56-92 2-36 (309)
429 3gvp_A Adenosylhomocysteinase 85.8 0.56 1.9E-05 46.6 4.0 35 54-92 219-253 (435)
430 3q2o_A Phosphoribosylaminoimid 85.8 0.91 3.1E-05 44.8 5.7 36 54-93 13-48 (389)
431 3c24_A Putative oxidoreductase 85.7 0.84 2.9E-05 42.9 5.2 33 56-92 12-45 (286)
432 3ldh_A Lactate dehydrogenase; 85.7 0.8 2.7E-05 44.0 5.0 34 55-92 21-56 (330)
433 2p4q_A 6-phosphogluconate dehy 85.5 0.67 2.3E-05 47.5 4.7 36 54-93 9-44 (497)
434 2gf2_A Hibadh, 3-hydroxyisobut 85.4 0.57 1.9E-05 44.3 3.9 33 57-93 2-34 (296)
435 4aj2_A L-lactate dehydrogenase 85.4 0.93 3.2E-05 43.7 5.3 35 54-92 18-54 (331)
436 2g5c_A Prephenate dehydrogenas 85.3 0.75 2.5E-05 43.1 4.6 32 57-92 3-36 (281)
437 3tri_A Pyrroline-5-carboxylate 85.3 0.71 2.4E-05 43.4 4.4 34 55-92 3-39 (280)
438 3ce6_A Adenosylhomocysteinase; 85.2 0.59 2E-05 47.6 4.0 35 54-92 273-307 (494)
439 2we8_A Xanthine dehydrogenase; 85.2 0.89 3E-05 44.8 5.2 37 54-94 203-239 (386)
440 2rir_A Dipicolinate synthase, 85.1 0.83 2.8E-05 43.4 4.8 35 54-92 156-190 (300)
441 2ahr_A Putative pyrroline carb 85.0 0.94 3.2E-05 41.8 5.1 33 56-92 4-36 (259)
442 3d4o_A Dipicolinate synthase s 84.9 0.85 2.9E-05 43.1 4.8 35 54-92 154-188 (293)
443 2pgd_A 6-phosphogluconate dehy 84.8 0.73 2.5E-05 47.1 4.6 34 56-93 3-36 (482)
444 3ew7_A LMO0794 protein; Q8Y8U8 84.6 0.91 3.1E-05 40.4 4.7 32 57-92 2-34 (221)
445 1yj8_A Glycerol-3-phosphate de 84.5 0.51 1.7E-05 46.4 3.2 34 56-93 22-62 (375)
446 3gpi_A NAD-dependent epimerase 84.4 0.91 3.1E-05 42.4 4.8 34 56-93 4-37 (286)
447 1zud_1 Adenylyltransferase THI 84.4 0.79 2.7E-05 42.3 4.2 35 55-93 28-63 (251)
448 3don_A Shikimate dehydrogenase 84.3 0.71 2.4E-05 43.3 3.8 35 55-93 117-152 (277)
449 1pgj_A 6PGDH, 6-PGDH, 6-phosph 84.2 0.77 2.6E-05 46.8 4.4 33 56-92 2-34 (478)
450 3two_A Mannitol dehydrogenase; 84.2 1.4 4.6E-05 42.8 6.1 35 55-93 177-211 (348)
451 1p77_A Shikimate 5-dehydrogena 84.2 0.69 2.4E-05 43.2 3.8 34 55-92 119-152 (272)
452 2wtb_A MFP2, fatty acid multif 83.7 1.1 3.7E-05 48.2 5.5 34 56-93 313-346 (725)
453 4gbj_A 6-phosphogluconate dehy 83.6 0.68 2.3E-05 43.9 3.5 35 56-94 6-40 (297)
454 3gt0_A Pyrroline-5-carboxylate 83.5 0.97 3.3E-05 41.4 4.5 33 56-92 3-39 (247)
455 4e4t_A Phosphoribosylaminoimid 83.5 1.4 4.7E-05 44.1 5.9 36 54-93 34-69 (419)
456 1mld_A Malate dehydrogenase; o 83.4 0.97 3.3E-05 43.3 4.5 33 56-92 1-36 (314)
457 3rui_A Ubiquitin-like modifier 83.4 1.1 3.7E-05 43.2 4.8 35 55-93 34-69 (340)
458 3h8v_A Ubiquitin-like modifier 83.4 0.77 2.6E-05 43.3 3.7 37 54-93 35-71 (292)
459 3fi9_A Malate dehydrogenase; s 83.4 1 3.5E-05 43.6 4.7 36 55-92 8-44 (343)
460 2hk9_A Shikimate dehydrogenase 83.3 0.81 2.8E-05 42.8 3.8 34 55-92 129-162 (275)
461 4gx0_A TRKA domain protein; me 83.3 0.86 2.9E-05 47.6 4.4 35 56-94 349-383 (565)
462 1nvt_A Shikimate 5'-dehydrogen 83.3 1.3 4.3E-05 41.8 5.2 33 55-92 128-160 (287)
463 4g65_A TRK system potassium up 83.2 1 3.5E-05 45.6 4.8 34 55-93 235-268 (461)
464 3k5i_A Phosphoribosyl-aminoimi 83.2 0.98 3.3E-05 44.9 4.6 36 52-92 21-56 (403)
465 1hdo_A Biliverdin IX beta redu 83.1 1.2 4.1E-05 39.0 4.8 34 56-93 4-38 (206)
466 2zqz_A L-LDH, L-lactate dehydr 83.1 1 3.5E-05 43.3 4.5 37 54-92 8-44 (326)
467 3h2s_A Putative NADH-flavin re 83.1 1.1 3.8E-05 39.9 4.6 32 57-92 2-34 (224)
468 2iz1_A 6-phosphogluconate dehy 83.0 1 3.5E-05 45.9 4.7 34 55-92 5-38 (474)
469 3dhn_A NAD-dependent epimerase 82.9 1.1 3.9E-05 40.0 4.6 35 56-94 5-40 (227)
470 1np3_A Ketol-acid reductoisome 82.9 1 3.5E-05 43.5 4.6 33 56-92 17-49 (338)
471 1edz_A 5,10-methylenetetrahydr 82.9 1.1 3.9E-05 42.7 4.7 34 54-91 176-210 (320)
472 3d1l_A Putative NADP oxidoredu 82.6 0.75 2.6E-05 42.7 3.3 33 56-92 11-44 (266)
473 3u62_A Shikimate dehydrogenase 82.6 1 3.5E-05 41.5 4.2 33 57-93 110-143 (253)
474 1b8p_A Protein (malate dehydro 82.6 1 3.5E-05 43.4 4.4 34 54-91 4-45 (329)
475 3on5_A BH1974 protein; structu 82.5 0.73 2.5E-05 44.8 3.2 36 55-94 199-234 (362)
476 2qrj_A Saccharopine dehydrogen 82.5 0.97 3.3E-05 44.4 4.1 35 54-92 213-251 (394)
477 3jyo_A Quinate/shikimate dehyd 82.4 1.3 4.5E-05 41.6 4.9 35 54-92 126-161 (283)
478 2pzm_A Putative nucleotide sug 82.4 1.6 5.6E-05 41.7 5.7 36 54-93 19-55 (330)
479 3o8q_A Shikimate 5-dehydrogena 82.2 1.5 5.1E-05 41.2 5.2 35 54-92 125-160 (281)
480 1i36_A Conserved hypothetical 82.2 0.96 3.3E-05 41.8 3.9 30 57-90 2-31 (264)
481 1y7t_A Malate dehydrogenase; N 81.9 1.1 3.9E-05 43.0 4.4 34 55-92 4-45 (327)
482 3tnl_A Shikimate dehydrogenase 81.8 1.4 4.6E-05 42.2 4.8 35 54-92 153-188 (315)
483 4b4o_A Epimerase family protei 81.8 1.4 4.8E-05 41.5 4.9 35 56-94 1-36 (298)
484 3ojo_A CAP5O; rossmann fold, c 81.7 1 3.5E-05 45.1 4.1 34 56-93 12-45 (431)
485 1smk_A Malate dehydrogenase, g 81.6 1.1 3.6E-05 43.2 4.0 34 55-92 8-44 (326)
486 3h9u_A Adenosylhomocysteinase; 81.5 1.1 3.6E-05 44.7 4.0 35 54-92 210-244 (436)
487 1y56_A Hypothetical protein PH 81.4 1.1 3.8E-05 45.8 4.4 50 179-249 265-314 (493)
488 1e3i_A Alcohol dehydrogenase, 81.2 1.8 6.1E-05 42.4 5.7 33 56-92 197-230 (376)
489 1kjq_A GART 2, phosphoribosylg 81.2 1.9 6.6E-05 42.3 6.0 36 54-93 10-45 (391)
490 3n58_A Adenosylhomocysteinase; 81.1 1.1 3.8E-05 44.7 4.0 35 54-92 246-280 (464)
491 3pwz_A Shikimate dehydrogenase 81.1 1.6 5.5E-05 40.7 5.0 35 54-92 119-154 (272)
492 2d4a_B Malate dehydrogenase; a 81.0 1.1 3.7E-05 42.8 3.8 32 57-92 1-33 (308)
493 2d5c_A AROE, shikimate 5-dehyd 81.0 1.3 4.3E-05 41.1 4.2 32 57-92 118-149 (263)
494 1yb4_A Tartronic semialdehyde 80.8 0.84 2.9E-05 43.0 3.0 32 56-92 4-35 (295)
495 1gpj_A Glutamyl-tRNA reductase 80.8 1 3.6E-05 44.7 3.8 34 55-92 167-201 (404)
496 3fbt_A Chorismate mutase and s 80.8 1.4 4.7E-05 41.4 4.4 35 54-92 121-156 (282)
497 3b1f_A Putative prephenate deh 80.8 1.3 4.4E-05 41.6 4.3 35 56-92 7-41 (290)
498 1wdk_A Fatty oxidation complex 80.6 1.2 4.2E-05 47.7 4.5 34 56-93 315-348 (715)
499 2dbq_A Glyoxylate reductase; D 80.4 1.8 6E-05 41.8 5.1 35 54-92 149-183 (334)
500 1p0f_A NADP-dependent alcohol 79.9 1.7 5.8E-05 42.6 4.9 33 56-92 193-226 (373)
No 1
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.3e-43 Score=371.39 Aligned_cols=374 Identities=18% Similarity=0.201 Sum_probs=285.9
Q ss_pred CCCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchh
Q 010200 50 TNNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY 129 (515)
Q Consensus 50 ~~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~ 129 (515)
..+++.+||+||||||+||++|+.|++. |++|+||||.+.+. ..+++..++++++++|+.+|+++.
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~----G~~v~vlE~~~~~~----------~~~r~~~l~~~~~~~l~~lGl~~~ 71 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLA----GVEVVVLERLVERT----------GESRGLGFTARTMEVFDQRGILPR 71 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCCC-C----------CCCCSEEECHHHHHHHHTTTCGGG
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCC----------CCCCcceECHHHHHHHHHCCCHHH
Confidence 3455679999999999999999999996 99999999998763 335689999999999999999988
Q ss_pred hhhhhccccceEEEEeCCCccceeeecccCC-CCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcc
Q 010200 130 VQQHRHAYFDKMQVWDYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (515)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~ 208 (515)
+.+. . ...... +. + ..+...... ..+..+.+++..+.+.|.+.+.+.| ++|+++++|++++.
T Consensus 72 ~~~~-~-~~~~~~-~~--~---~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~-------- 134 (500)
T 2qa1_A 72 FGEV-E-TSTQGH-FG--G---LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLG-ADIRRGHEVLSLTD-------- 134 (500)
T ss_dssp GCSC-C-BCCEEE-ET--T---EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTT-CEEEETCEEEEEEE--------
T ss_pred HHhc-c-cccccc-cc--c---eecccccCCCCCCceeecCHHHHHHHHHHHHHHCC-CEEECCcEEEEEEE--------
Confidence 8765 2 222221 11 1 122222221 2234688999999999999999987 99999999999987
Q ss_pred cCCCCCcccccccCCeeEEEcCCCc---EEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecCCceEEEEe
Q 010200 209 VDSTPSATTLFTKGHLAKLDLSDGT---SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRF 285 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~g~---~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (515)
+++.+++++.++. ++++|+||+|||.+|.||+.+|.......+...++.+.+............+
T Consensus 135 ------------~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (500)
T 2qa1_A 135 ------------DGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGET 202 (500)
T ss_dssp ------------ETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCCCCEEEEEE
T ss_pred ------------cCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCCCCceEEEE
Confidence 3456788887764 7999999999999999999999887777777778887777654333344556
Q ss_pred cCCCcEEEEecCCCceEEEEEcCCCC-hHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCcccccccc
Q 010200 286 LPAGPIALLPIGDNFSNIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 364 (515)
Q Consensus 286 ~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (515)
.++++++++|++++.+++++...... .......+.+++.+.+.+.+.....
T Consensus 203 ~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------------------------- 254 (500)
T 2qa1_A 203 LPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIA---------------------------- 254 (500)
T ss_dssp ETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCT----------------------------
T ss_pred CCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCC----------------------------
Confidence 78899999999998877777653322 2223446778888888775541000
Q ss_pred ccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHH
Q 010200 365 FEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLL 444 (515)
Q Consensus 365 ~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al 444 (515)
+ ... .....|+...+.+++|..|||+|+|||||.++|+.|||+|+||+||.+|+++|...++.. ....+|
T Consensus 255 --~----~~~-~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~---~~~~~L 324 (500)
T 2qa1_A 255 --H----AEP-VWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT---ATEELL 324 (500)
T ss_dssp --T----SEE-EEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCHHHH
T ss_pred --c----cce-eEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHH
Confidence 0 000 011236666667888999999999999999999999999999999999999999987532 237899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHHHhhcCCC
Q 010200 445 KKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQR 506 (515)
Q Consensus 445 ~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~ 506 (515)
+.|+++|++++..++..++.+..++.. ++....+|+.++.++ ..|.+++.+.+..+|.+.
T Consensus 325 ~~Y~~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~g~~~ 384 (500)
T 2qa1_A 325 DSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTELI-QYGEVARHLAGMVSGLEI 384 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS-CGGGHHHHHHHHHHH-TSHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHHHHhhhhccCCC
Confidence 999999999999999999999998874 566778999888777 578899999988887653
No 2
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.6e-43 Score=370.64 Aligned_cols=371 Identities=20% Similarity=0.230 Sum_probs=286.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
...+||+||||||+||++|+.|++. |++|+||||.+.+. ..+++..++++++++|+.+|+++.+.+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~----G~~v~vlE~~~~~~----------~~~r~~~l~~~~~~~l~~lGl~~~~~~ 75 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG----GVDVMVLEQLPQRT----------GESRGLGFTARTMEVFDQRGILPAFGP 75 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCSSCC----------CCCCSEEECHHHHHHHHHTTCGGGGCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCC----------CCCceeEECHHHHHHHHHCCCHHHHHh
Confidence 3569999999999999999999996 99999999998763 345689999999999999999988876
Q ss_pred hhccccceEEEEeCCCccceeeecccCC-CCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
. . ...... +. + ..+...... ..+..+.+++..+.+.|.+.+.+.| ++|+++++|++++.
T Consensus 76 ~-~-~~~~~~-~~--~---~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~----------- 135 (499)
T 2qa2_A 76 V-E-TSTQGH-FG--G---RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRG-AELLRGHTVRALTD----------- 135 (499)
T ss_dssp C-C-EESEEE-ET--T---EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEE-----------
T ss_pred c-c-ccccce-ec--c---eecccccCCCCCCceEecCHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE-----------
Confidence 4 2 222211 11 1 122222222 2234688999999999999999987 99999999999987
Q ss_pred CCCcccccccCCeeEEEcCCCc---EEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecCCceEEEEecCC
Q 010200 212 TPSATTLFTKGHLAKLDLSDGT---SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPA 288 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~---~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (515)
+++.+++++.++. ++++|+||+|||.+|.||+.+|.......+...++.+.+............+.++
T Consensus 136 ---------~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 206 (499)
T 2qa2_A 136 ---------EGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPL 206 (499)
T ss_dssp ---------CSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCCCCEEEEEEETT
T ss_pred ---------eCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCCCcceEEEECCC
Confidence 3345778887764 7999999999999999999999887777777777888777654333344556788
Q ss_pred CcEEEEecCCCceEEEEEcCCCC-hHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccC
Q 010200 289 GPIALLPIGDNFSNIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEV 367 (515)
Q Consensus 289 g~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 367 (515)
++++++|++++.+++++...... .......+.+++.+.+.+.+..... +
T Consensus 207 g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------~ 256 (499)
T 2qa2_A 207 GMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDIS------------------------------H 256 (499)
T ss_dssp EEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCT------------------------------T
T ss_pred eEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCC------------------------------c
Confidence 99999999988877777653321 1122346778888888775531000 0
Q ss_pred CcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHH
Q 010200 368 PPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKY 447 (515)
Q Consensus 368 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y 447 (515)
... .....|++..+.+++|..|||+|+|||||.++|+.|||+|+||+||.+|++.|...++.. ....+|+.|
T Consensus 257 ----~~~-~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~---~~~~~L~~Y 328 (499)
T 2qa2_A 257 ----GEP-VWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGR---APAGLLDTY 328 (499)
T ss_dssp ----CEE-EEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCTHHHHHH
T ss_pred ----cce-eEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHHHHH
Confidence 000 011236666667888999999999999999999999999999999999999999987532 237899999
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHHHhhcCCC
Q 010200 448 EAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQR 506 (515)
Q Consensus 448 ~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~ 506 (515)
+++|++++..++..++.+..++.. ++....+|+.++.++ ..|.+++.+....+|.+.
T Consensus 329 e~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~~~~~ 385 (499)
T 2qa2_A 329 HEERHPVGRRLLMNTQAQGMLFLS-GDEMQPLRDVLSELI-RYDEVSRHLAGMVSGLDI 385 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-CGGGHHHHHHHHHHH-TSSHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHHHHHHHHhCCCC
Confidence 999999999999999999998874 567778999888777 578899999888887654
No 3
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=1.8e-44 Score=382.64 Aligned_cols=376 Identities=21% Similarity=0.223 Sum_probs=284.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
+++||+||||||+||++|+.|++. |++|+||||.+.+. ..+++..++++++++|+.+|+++.+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~----G~~V~VlEr~~~~~----------~~~r~~~l~~~s~~~l~~lGl~~~l~~~ 113 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG----GVGALVLEKLVEPV----------GHDRAGALHIRTVETLDLRGLLDRFLEG 113 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT----TCCEEEEBSCSSCC----------CSSSCCCBCHHHHHHHHTTTCHHHHTTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEcCCCCCC----------CCceEEEECHHHHHHHHHcCChHHHHhc
Confidence 468999999999999999999996 99999999998763 3455889999999999999999998876
Q ss_pred hccccceEEEEeCCCccceeeecccCC-CCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
....... .+. +.....+...... ....++.+++..+.+.|.+.+.+.| ++|+++++|++++.
T Consensus 114 ~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~l~~------------ 176 (570)
T 3fmw_A 114 TQVAKGL--PFA--GIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAG-AEIPRGHEVTRLRQ------------ 176 (570)
T ss_dssp CCBCSBC--CBT--TBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHT-EECCBSCEEEECCB------------
T ss_pred CcccCCc--eeC--CcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE------------
Confidence 5532211 011 1100012211111 2234577999999999999999887 99999999999976
Q ss_pred CCcccccccCCeeEEEc--CCC-cEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecCCceEEE-EecCC
Q 010200 213 PSATTLFTKGHLAKLDL--SDG-TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQ-RFLPA 288 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~--~~g-~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 288 (515)
+++.++|++ .+| .+++||+||+|||.+|.||+.+|+......+...++.+.+....+. ..+. .+.+.
T Consensus 177 --------~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~ 247 (570)
T 3fmw_A 177 --------DAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE-VPRRWERTPD 247 (570)
T ss_dssp --------CSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS-SCCCCCCCCS
T ss_pred --------cCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC-cceEEEecCC
Confidence 334577776 678 6899999999999999999999988888888888888877766544 1222 35577
Q ss_pred CcEEE-EecCCCce-EEEEEcCCCC-hHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccc
Q 010200 289 GPIAL-LPIGDNFS-NIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECF 365 (515)
Q Consensus 289 g~~~~-~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (515)
|++++ +|++++.. +++|...... .......+.+++.+.+.+.+. .. ++
T Consensus 248 G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~---------------~~---------- 298 (570)
T 3fmw_A 248 GILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRG----TP---------------LT---------- 298 (570)
T ss_dssp SCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSS----CC---------------CC----------
T ss_pred EEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhh----cc---------------cc----------
Confidence 88887 89998887 7777765333 223345667777776655332 00 00
Q ss_pred cCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHH
Q 010200 366 EVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLK 445 (515)
Q Consensus 366 ~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~ 445 (515)
..........|++..+..++|..++|+|+|||||.++|+.|||+|+||+||.+|+++|...++.. ....+|+
T Consensus 299 -----~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~---~~~~lL~ 370 (570)
T 3fmw_A 299 -----LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGW---GSEELLD 370 (570)
T ss_dssp -----CCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSC---CCHHHHH
T ss_pred -----cceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCC---CcHHHHH
Confidence 00111123357887778899999999999999999999999999999999999999999987642 3488999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHHHhhcCCCC
Q 010200 446 KYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQRL 507 (515)
Q Consensus 446 ~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~ 507 (515)
.|+++|++++..++..++.+..+|+....+...+|+.++.++ .+|.+++.+++..+|+...
T Consensus 371 ~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~l~-~~~~~~~~~~~~~~g~~~~ 431 (570)
T 3fmw_A 371 TYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELL-GTDEVNRYFTGMITGTDVR 431 (570)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHHHT-TSHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh-cCHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999999987666899999999999 7899999999999987643
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=1.9e-43 Score=362.09 Aligned_cols=374 Identities=17% Similarity=0.217 Sum_probs=276.8
Q ss_pred CCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhh
Q 010200 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYV 130 (515)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~ 130 (515)
...+++||+||||||+||++|+.|++. |++|+||||.+.+. ..++++.++++++++|+.+|+++.+
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~----G~~V~v~E~~~~~~----------~~~~~~~l~~~~~~~l~~lg~~~~~ 84 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQS----GIDCDVYEAVKEIK----------PVGAAISVWPNGVKCMAHLGMGDIM 84 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSCC--------------CEEEECHHHHHHHHHTTCHHHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC----------CcCeeEEECHHHHHHHHHCCCHHHH
Confidence 344679999999999999999999996 99999999998763 3456899999999999999999999
Q ss_pred hhhhccccceEEEEeCC-CccceeeecccC--CCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCc
Q 010200 131 QQHRHAYFDKMQVWDYT-GLGYTKYNARDV--NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSI 207 (515)
Q Consensus 131 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~ 207 (515)
.+... +...+.+++.. +.....++.... .....++.++|..|.+.|.+.+.+ ++|+++++|++++.
T Consensus 85 ~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~------- 153 (407)
T 3rp8_A 85 ETFGG-PLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEE------- 153 (407)
T ss_dssp HHHSC-CCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEE-------
T ss_pred HhhcC-CCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEe-------
Confidence 88766 67788888766 444444442211 112445889999999999999976 68999999999987
Q ss_pred ccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhc-CCccccccCCceEEEEEEEeecC--CceEE-E
Q 010200 208 SVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELA-GFKTTGWSYSQNAIICTVEHNKE--NYCAW-Q 283 (515)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 283 (515)
.++.+++++.+|+++.+|+||+|||.+|.+|+.+ +........+...+.+.++.... ....+ .
T Consensus 154 -------------~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (407)
T 3rp8_A 154 -------------DADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTT 220 (407)
T ss_dssp -------------ETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEE
T ss_pred -------------cCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEE
Confidence 4467899999999999999999999999999999 65544444455555566554422 22333 3
Q ss_pred EecCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccc
Q 010200 284 RFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKE 363 (515)
Q Consensus 284 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (515)
.+.++++++++|++++...+++....+.. ...+.+.+.+.+.+.+. .|.+. ..+.+.. ...
T Consensus 221 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~-~~~~~-------~~~~~~~----~~~---- 281 (407)
T 3rp8_A 221 FVGEGKQVSLMPVSAGRFYFFFDVPLPAG---LAEDRDTLRADLSRYFA-GWAPP-------VQKLIAA----LDP---- 281 (407)
T ss_dssp EEETTEEEEEEEETTTEEEEEEEEECCTT---CSCCTTTHHHHHHHHTT-TCCHH-------HHHHHHH----SCG----
T ss_pred EECCCcEEEEEEcCCCeEEEEEEeCCCcC---CCCCchhHHHHHHHHhc-CCChH-------HHHHHHc----CCc----
Confidence 44788999999999998888777653321 12344566677777665 33322 1111111 000
Q ss_pred cccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHH
Q 010200 364 CFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 443 (515)
Q Consensus 364 ~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~a 443 (515)
..+ .....+++. ..++|..++|+|||||||.++|++|||+|+||+||..|+++|... + ....+
T Consensus 282 -----~~~----~~~~~~~~~--~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~---~~~~~ 344 (407)
T 3rp8_A 282 -----QTT----NRIEIHDIE--PFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---R---DIAAA 344 (407)
T ss_dssp -----GGC----EEEEEEECC--CCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---C---CHHHH
T ss_pred -----cce----eEEeeEecC--CCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---C---CHHHH
Confidence 000 001123332 237888999999999999999999999999999999999999853 2 34889
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHH
Q 010200 444 LKKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIIS 499 (515)
Q Consensus 444 l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 499 (515)
|+.|+++|++++..++..++.+.++++..+++..+.|+..++.... +.+.+.+..
T Consensus 345 l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~R~~~l~~~~~-~~~~~~~~~ 399 (407)
T 3rp8_A 345 LREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQELREETG-ERIINGMCD 399 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHSCCS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHHHHHHHHHHHhhccH-HHHHHhhhh
Confidence 9999999999999999999999999999999999999999987764 334444433
No 5
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-44 Score=364.98 Aligned_cols=375 Identities=19% Similarity=0.220 Sum_probs=267.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+||||||+|+++|+.|++. |++|+||||.+.+. ..+++..+.+++.++|+.+|+++.+...
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~----G~~V~viE~~~~~~----------~~~~~~~l~~~~~~~l~~~g~~~~~~~~ 70 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ----GHRVVVVEQARRER----------AINGADLLKPAGIRVVEAAGLLAEVTRR 70 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCCC-------------CCCCEECHHHHHHHHHTTCHHHHHHT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCCCCC----------ccCceeeECchHHHHHHHcCcHHHHHHh
Confidence 358999999999999999999996 99999999997652 3345789999999999999999988765
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
.. ....+.+++..+.....++.........++.++|..|.+.|.+.+.+.++++|+++++|++++.
T Consensus 71 ~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~------------- 136 (399)
T 2x3n_A 71 GG-RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR------------- 136 (399)
T ss_dssp TC-EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE-------------
T ss_pred CC-CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE-------------
Confidence 44 5566666665554344444333333455788999999999999999983399999999999986
Q ss_pred CcccccccCCee--EEEcCCCcEEEeeEEEEecCCCchhhhhcCCccccc--cCCc--eEEEEEEEeecCCceEEEEecC
Q 010200 214 SATTLFTKGHLA--KLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGW--SYSQ--NAIICTVEHNKENYCAWQRFLP 287 (515)
Q Consensus 214 ~~~~~~~~~~~~--~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~ 287 (515)
+++.+ .+++.+|+++.+|+||+|||.+|.+|+.++...... .++. .++.+.++...+.. . ..+.+
T Consensus 137 -------~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 207 (399)
T 2x3n_A 137 -------DERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN-R-LYVDS 207 (399)
T ss_dssp -------CTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE-E-EEECT
T ss_pred -------cCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc-c-EEEcC
Confidence 33456 788889989999999999999999999998765555 5666 66666555432222 3 66778
Q ss_pred -CCcEEEEecCCCceEEEEEcCCCChHHhhc-CCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccc
Q 010200 288 -AGPIALLPIGDNFSNIVWTMNPKDASDCKS-MNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECF 365 (515)
Q Consensus 288 -~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (515)
+++++++|++++...+....+.+....... .+.+.+.+.+. .|.+... ...++.
T Consensus 208 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~------~~~~~~------------- 263 (399)
T 2x3n_A 208 QGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQ-----RFVGDES------AEAIAA------------- 263 (399)
T ss_dssp TSCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHH-----TTCCGGG------HHHHHT-------------
T ss_pred CCcEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHh-----hcCCcch------hhHHhc-------------
Confidence 899999999885544444334332222211 34455555443 2222100 000100
Q ss_pred cCCcceEEeccceeeecccc-ccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHH
Q 010200 366 EVPPRVVKLASERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLL 444 (515)
Q Consensus 366 ~i~~~~~~~~~~~~~~p~~~-~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al 444 (515)
+ . ......+|+.. ...++|..++|+|+|||||.++|++|||+|+||+||..|++.|...++.+.++ ..+|
T Consensus 264 -~-----~-~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~--~~~l 334 (399)
T 2x3n_A 264 -V-----T-GTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--EDAL 334 (399)
T ss_dssp -C-----C-CSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCH--HHHH
T ss_pred -C-----C-ccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchH--HHHH
Confidence 0 0 00223467766 56788999999999999999999999999999999999999999987644444 7899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHH
Q 010200 445 KKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIIS 499 (515)
Q Consensus 445 ~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 499 (515)
+.|+++|++++..++..++.+.++++..+++..++ +.+++++...|.+......
T Consensus 335 ~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 388 (399)
T 2x3n_A 335 AGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVF-DTALQGSSRTPEALGGERS 388 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HC-----------------
T ss_pred HHHHHHhccHHHHHHHHHHHhhhhhcccCchHHHH-HHHHhhhcCCCcccCCccc
Confidence 99999999999999999999999999988888889 9999988887765444333
No 6
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2e-41 Score=345.64 Aligned_cols=377 Identities=15% Similarity=0.119 Sum_probs=268.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
++||+||||||+||++|+.|++. |++|+||||.+.+.. ....++..++++++++|+.+|+++.+.+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~~--------~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA----GIDNVILERQTPDYV--------LGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH----TCCEEEECSSCHHHH--------HTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred CccEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCCcc--------cCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 47999999999999999999996 999999999875200 001123358999999999999999988765
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. +...+.++..... ..++.........++.+.+..+.+.|.+.+.+.| ++|+++++|++++.
T Consensus 70 ~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~i~~~~~v~~i~~-------------- 131 (394)
T 1k0i_A 70 L-VHEGVEIAFAGQR--RRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACG-ATTVYQAAEVRLHD-------------- 131 (394)
T ss_dssp E-EESCEEEEETTEE--EEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEC--------------
T ss_pred C-ccceEEEEECCce--EEeccccccCCCceEEechHHHHHHHHHHHHhcC-CeEEeceeEEEEEE--------------
Confidence 5 5566666654322 2222111111334677899999999999998887 99999999999975
Q ss_pred cccccccCCeeEEEc-CCCc--EEEeeEEEEecCCCchhhhhcCCccccccCCc---eEEEEEEEe-ecCCceEEEEecC
Q 010200 215 ATTLFTKGHLAKLDL-SDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQ---NAIICTVEH-NKENYCAWQRFLP 287 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~-~~g~--~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~ 287 (515)
++++.+.|++ .+|+ ++++|+||+|||.+|.+|+.++..... .+.. ..+...+.. .......+....+
T Consensus 132 -----~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (394)
T 1k0i_A 132 -----LQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERLK-VFERVYPFGWLGLLADTPPVSHELIYANHP 205 (394)
T ss_dssp -----TTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGCE-EEEEEEEEEEEEEEESSCCSCSSCEEECCT
T ss_pred -----ecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCccccc-cccccccceeEEEecCCCCCccceEEEEcC
Confidence 0123466776 6786 799999999999999999999654221 1111 112222221 1111222223346
Q ss_pred CCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccC
Q 010200 288 AGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEV 367 (515)
Q Consensus 288 ~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 367 (515)
.+++++.|..++..++++...... .....+.+.+.+.+.+.|. .| ..+.+..
T Consensus 206 ~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~-~~--------------~~~~~~~----------- 257 (394)
T 1k0i_A 206 RGFALCSQRSATRSQYYVQVPLSE--KVEDWSDERFWTELKARLP-SE--------------VAEKLVT----------- 257 (394)
T ss_dssp TCCEEEEEEETTEEEEEEEECTTC--CGGGCCHHHHHHHHHHTSC-HH--------------HHHHCCC-----------
T ss_pred CceEEEEecCCCcEEEEEEeCCCC--CccccCHHHHHHHHHHhhC-cc--------------ccccccc-----------
Confidence 677777676667777777665432 1233566777777776543 00 0010000
Q ss_pred CcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHH
Q 010200 368 PPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKY 447 (515)
Q Consensus 368 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y 447 (515)
.... ....+|+.....++|..+||+|||||||.++|+.|||+|+||+||..|++.|...++.+. ..+|+.|
T Consensus 258 -~~~~----~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~----~~~L~~Y 328 (394)
T 1k0i_A 258 -GPSL----EKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGR----GELLERY 328 (394)
T ss_dssp -CCEE----EEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCC----GGGGGGH
T ss_pred -Ccce----eeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCc----hHHHHHH
Confidence 0000 112356555566778899999999999999999999999999999999999998765432 5689999
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhc---CCCChHHHHHHHHHHhcccChhHHHHHHHHhhcC
Q 010200 448 EAERKPANIVMMAVLDGFQKAYS---VDFGPLNILRAAAFHGAQYISPLKRNIISYASGE 504 (515)
Q Consensus 448 ~~~r~~~~~~~~~~s~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~ 504 (515)
+++|++++..++..++.+..+++ ..++++.++|+..|..+...|.+++.+++.++|.
T Consensus 329 ~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~ 388 (394)
T 1k0i_A 329 SAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVGL 388 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHhcCC
Confidence 99999999999999998887765 3457888999999999999999999999999997
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=8.9e-41 Score=360.55 Aligned_cols=354 Identities=19% Similarity=0.262 Sum_probs=258.1
Q ss_pred CccEEEECCCHHHHHHHHHHhc-----CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchh
Q 010200 55 QYDVAVVGGGMVGMALACSLAS-----MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY 129 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~-----~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~ 129 (515)
++||+||||||+||++|+.|++ . |++|+||||.+.+ ...+++..++++++++|+.+|+++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~----Gi~v~viE~~~~~----------~~~gra~~l~~~tle~l~~lGl~~~ 73 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP----DLKVRIIDKRSTK----------VYNGQADGLQCRTLESLKNLGLADK 73 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST----TCCEEEECSSSSC----------CCSCSCCEECHHHHHHHHTTTCHHH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC----CCCEEEEeCCCCC----------CCCCceeEEChHHHHHHHHCCCHHH
Confidence 5899999999999999999999 8 8999999998765 2346688999999999999999999
Q ss_pred hhhhhccccceEEEEeCCCcccee----eeccc-CCCCcceEEechHHHHHHHHHHHhcCC--CceEEcCCeeEEEEeCC
Q 010200 130 VQQHRHAYFDKMQVWDYTGLGYTK----YNARD-VNKEILGCVVENKVLHSSLLSCMQNTE--FQKTIYPSRLTSMALLP 202 (515)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~g--~v~i~~~~~v~~i~~~~ 202 (515)
+.+... +...+.+|+......+. ++... .......+.++|..+++.|.+.+.+.| +++|+++++|++++.+.
T Consensus 74 l~~~~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 74 ILSEAN-DMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHTTCB-CCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHhcc-ccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 987665 67778888754322221 21111 112334477999999999999998875 58999999999998721
Q ss_pred CCCCcccCCCCCcccccccCCeeEEEcC------------------------------------------CC--cEEEee
Q 010200 203 SSSSISVDSTPSATTLFTKGHLAKLDLS------------------------------------------DG--TSLYAK 238 (515)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~------------------------------------------~g--~~~~ad 238 (515)
. ...+. +...+++++. +| ++++||
T Consensus 153 ~-----~~~~~-------~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~ 220 (665)
T 1pn0_A 153 S-----KAEDP-------EAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCK 220 (665)
T ss_dssp G-----GTTCT-------TCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEE
T ss_pred c-----ccccC-------CCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeC
Confidence 0 00000 1123555442 45 479999
Q ss_pred EEEEecCCCchhhhhcCCccccccCCceEEEEEEEee--cCC-ceEEEEe-cCCCcEEEEecCCCceEEEEEcCCCCh--
Q 010200 239 LVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN--KEN-YCAWQRF-LPAGPIALLPIGDNFSNIVWTMNPKDA-- 312 (515)
Q Consensus 239 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~g~~~~~p~~~~~~~~~~~~~~~~~-- 312 (515)
+||+|||++|.||++++....+..+...+....+... .+. ......+ .+.++++++|.+++.+++++.......
T Consensus 221 ~VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~ 300 (665)
T 1pn0_A 221 YVIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKG 300 (665)
T ss_dssp EEEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC-----
T ss_pred EEEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccc
Confidence 9999999999999999887766655544333333222 121 1122222 368999999999998888887765431
Q ss_pred --HHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEeccceeeeccccccccc
Q 010200 313 --SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANN 390 (515)
Q Consensus 313 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~ 390 (515)
......+.+.+.+.+++.+. .|.. .+ .....+..|++..+.+++
T Consensus 301 ~~~~~~~~t~e~~~~~~~~~~~-~~~~--------------------------------~~-~~~~~~~~~~~~~r~a~~ 346 (665)
T 1pn0_A 301 GRVDRTKFTPEVVIANAKKIFH-PYTF--------------------------------DV-QQLDWFTAYHIGQRVTEK 346 (665)
T ss_dssp -----CCCCHHHHHHHHHHHHT-TSCC--------------------------------EE-EEEEEEEEEEEEEEECSC
T ss_pred cccCcCCCCHHHHHHHHHHHhC-cccC--------------------------------ce-eeEEEEEeeeccceehhh
Confidence 12344677888888877553 1100 01 111223357777777889
Q ss_pred cc-cCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 010200 391 YV-SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAY 469 (515)
Q Consensus 391 ~~-~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~ 469 (515)
|. .+||+|+|||||.++|+.|||+|+||+||.+|++.|...++.. ....+|+.|+++|++++..++..++.+.++|
T Consensus 347 ~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~---a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~ 423 (665)
T 1pn0_A 347 FSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR---AKRDILKTYEEERQPFAQALIDFDHQFSRLF 423 (665)
T ss_dssp SEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC---BCGGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98 7999999999999999999999999999999999999988632 3367999999999999999999999999998
Q ss_pred cCC
Q 010200 470 SVD 472 (515)
Q Consensus 470 ~~~ 472 (515)
+..
T Consensus 424 ~~~ 426 (665)
T 1pn0_A 424 SGR 426 (665)
T ss_dssp HSC
T ss_pred cCC
Confidence 764
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=8.3e-41 Score=342.58 Aligned_cols=364 Identities=15% Similarity=0.179 Sum_probs=231.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh-
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR- 134 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~- 134 (515)
++|+||||||+||++|+.|+++ |++|+||||.+.+... ..+.++.++++++++|+++|+.+.+....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~----G~~v~v~Er~~~~~~~--------~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~ 69 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH----GIKVTIYERNSAASSI--------LPGYGIHINSFGKQALQECLPAENWLAFEE 69 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCSSCSS--------CCCCEEEECHHHHHHHHHHSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCCEEEEecCCCCCcC--------CCceEEeeCHHHHHHHHHcCChHHHHHhhh
Confidence 6899999999999999999996 9999999999877322 23568899999999999999977664421
Q ss_pred --ccccceEEEEeCCCccceeee----cccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcc
Q 010200 135 --HAYFDKMQVWDYTGLGYTKYN----ARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (515)
Q Consensus 135 --~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~ 208 (515)
........+++.......... ..........+.++|..|.+.|.+.+ + .+|+++++|++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~-~~v~~~~~v~~~~~-------- 137 (412)
T 4hb9_A 70 ASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---A-NTIQWNKTFVRYEH-------- 137 (412)
T ss_dssp HCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---T-TTEECSCCEEEEEE--------
T ss_pred hhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---c-ceEEEEEEEEeeeE--------
Confidence 111122223322221111100 00011122336789999999998765 3 56899999999976
Q ss_pred cCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecCC---------c
Q 010200 209 VDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN---------Y 279 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~ 279 (515)
.++..++++++||+++++|+||+|||.+|.||+.++.......++..++.+........ .
T Consensus 138 -----------~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (412)
T 4hb9_A 138 -----------IENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRD 206 (412)
T ss_dssp -----------CTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTS
T ss_pred -----------cCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhcc
Confidence 12356899999999999999999999999999999877776667777777766654211 1
Q ss_pred eEEEEecCCCc--E----EEEe--------cCCCceEEEEEc---CCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCC
Q 010200 280 CAWQRFLPAGP--I----ALLP--------IGDNFSNIVWTM---NPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSI 342 (515)
Q Consensus 280 ~~~~~~~~~g~--~----~~~p--------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (515)
.....+.+... . +..| .......+.|.. ...........+.+.+.+.+.+.+. +|.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~---- 281 (412)
T 4hb9_A 207 GTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPS---- 281 (412)
T ss_dssp SCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHH----
T ss_pred CCcceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChH----
Confidence 11111112111 0 1111 111111222221 1222223345667778888887776 55433
Q ss_pred CCCcccchhccccCccccccccccCCcceEEeccceeeecccc-ccccccccCcEEEEcccccccCCccccchhhcHHHH
Q 010200 343 SSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDA 421 (515)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~-~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da 421 (515)
..+.+.. .+. .....+++.. ....+|..|+|+|||||||+|+|+.|||+|+||+||
T Consensus 282 ---~~~li~~----~~~----------------~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA 338 (412)
T 4hb9_A 282 ---LHTLVQQ----SDM----------------ENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDA 338 (412)
T ss_dssp ---HHHHHHT----SCT----------------TCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHH
T ss_pred ---HHHHHHh----ccc----------------ceeccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHH
Confidence 1111111 000 0000122211 135678999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHH--hhcCCCChHHHHHHHHHH
Q 010200 422 STLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQK--AYSVDFGPLNILRAAAFH 485 (515)
Q Consensus 422 ~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~--~~~~~~~~~~~~r~~~~~ 485 (515)
.+|+++|........++ ..+|+.|+++|++++..++..+..... +++...+.. ..|+..++
T Consensus 339 ~~La~~L~~~~~~~~~~--~~aL~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~r~~~~~ 401 (412)
T 4hb9_A 339 LLLTQKLASVASGHEEL--VKAISDYEQQMRAYANEIVGISLRSAQNAVIHFSIPPL-KQRHLSIR 401 (412)
T ss_dssp HHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------------
T ss_pred HHHHHHHHHHhcCCcCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH-HHHHHHHh
Confidence 99999999988765544 789999999999999999999887654 344444333 34554443
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=9.2e-40 Score=346.34 Aligned_cols=344 Identities=22% Similarity=0.258 Sum_probs=256.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+||||||+||++|+.|++. |++|+||||.+.+. ..+++..++++++++|+++|+++.+.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~----G~~v~viEr~~~~~----------~~~~~~~l~~~~~~~l~~lGl~~~~~~~ 69 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ----GVRVLVVERRPGLS----------PYPRAAGQNPRTMELLRIGGVADEVVRA 69 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSSSCC----------CCCCSCCBCHHHHHHHHHTTCHHHHHHS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCC----------CCCccceECHHHHHHHHHcCCHHHHHhh
Confidence 568999999999999999999996 99999999998763 3455778999999999999999999886
Q ss_pred hccccc--eEE--EE-eCCCccce----eeecc----cCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEe
Q 010200 134 RHAYFD--KMQ--VW-DYTGLGYT----KYNAR----DVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMAL 200 (515)
Q Consensus 134 ~~~~~~--~~~--~~-~~~~~~~~----~~~~~----~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~ 200 (515)
...... .+. .. ...+.... .++.. ....+...+.+++..|...|.+.+.+.| ++|+++++|++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~ 148 (535)
T 3ihg_A 70 DDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHG-GAIRFGTRLLSFRQ 148 (535)
T ss_dssp CCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE
T ss_pred CCCcccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE
Confidence 652211 111 21 11221111 11100 0011223567899999999999999987 99999999999987
Q ss_pred CCCCCCcccCCCCCcccccccCC----eeEEEcCCC---cEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEE
Q 010200 201 LPSSSSISVDSTPSATTLFTKGH----LAKLDLSDG---TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVE 273 (515)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~g---~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~ 273 (515)
+++ .+++++.++ .+++||+||+|||.+|.+|+.+|+......+....+...+.
T Consensus 149 --------------------~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~ 208 (535)
T 3ihg_A 149 --------------------HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFD 208 (535)
T ss_dssp --------------------ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEE
T ss_pred --------------------CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEe
Confidence 223 688887776 68999999999999999999998877666654444444444
Q ss_pred eecCC------ceEEEEecCCCcEEEEecCC-CceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 010200 274 HNKEN------YCAWQRFLPAGPIALLPIGD-NFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGS 346 (515)
Q Consensus 274 ~~~~~------~~~~~~~~~~g~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (515)
...+. ...+..+.++++.+++|..+ +.+.+.|...++........+.+.+.+.+++.+.. ..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~-~~---------- 277 (535)
T 3ihg_A 209 ADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDA-PE---------- 277 (535)
T ss_dssp CCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTC-SS----------
T ss_pred ccChhhccCCceEEEEEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCC-CC----------
Confidence 33211 12344456888889999987 56677776665543444567788888888886641 00
Q ss_pred ccchhccccCccccccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHH
Q 010200 347 VDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSR 426 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~ 426 (515)
.+.++. ....|++.....++|..+||+|+|||||.++|+.|||+|+||+||.+|++
T Consensus 278 --------------------~~~~~~----~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~ 333 (535)
T 3ihg_A 278 --------------------VKPELV----DIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAW 333 (535)
T ss_dssp --------------------CCCEEE----EEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHH
T ss_pred --------------------CceeEE----EeeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHH
Confidence 000111 12347777777899999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhc
Q 010200 427 IIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYS 470 (515)
Q Consensus 427 ~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~ 470 (515)
+|...++.. ....+|+.|+++|++++..++..+......+.
T Consensus 334 ~La~~l~g~---~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~ 374 (535)
T 3ihg_A 334 KLAAVLQGQ---AGAGLLDTYEDERKVAAELVVAEALAIYAQRM 374 (535)
T ss_dssp HHHHHHTTS---SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCC---CcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhc
Confidence 999987643 23678999999999999999999988876654
No 10
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=2.5e-38 Score=340.96 Aligned_cols=352 Identities=21% Similarity=0.299 Sum_probs=248.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhc-CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLAS-MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~-~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
+.++||+||||||+||++|+.|++ . |++|+||||.+.+. ..+++..++++++++|+.+|+.+.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~----G~~V~viEr~~~~~----------~~g~a~~l~~~t~e~l~~lGl~~~~~ 95 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP----DIRTCIVEQKEGPM----------ELGQADGIACRTMEMFEAFEFADSIL 95 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT----TSCEEEECSSSSCC----------SSCSCCEECHHHHHHHHHTTCHHHHH
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC----CCCEEEEeCCCCCC----------CCCceeeeCHHHHHHHHHcCcHHHHH
Confidence 356899999999999999999999 8 99999999998763 34568899999999999999999988
Q ss_pred hhhccccceEEEEeCCC--ccce----eeeccc-CCCCcceEEechHHHHHHHHHHHhcCC-CceEEcCCeeEEEEeCCC
Q 010200 132 QHRHAYFDKMQVWDYTG--LGYT----KYNARD-VNKEILGCVVENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPS 203 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~--~~~~----~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~g-~v~i~~~~~v~~i~~~~~ 203 (515)
+... ....+.+|.... ...+ .++... .......+.+++..+.+.|.+.+.+.| +++|+++++|++++.
T Consensus 96 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~--- 171 (639)
T 2dkh_A 96 KEAC-WINDVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKV--- 171 (639)
T ss_dssp HHSE-EECEEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEE---
T ss_pred Hhcc-cccceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEE---
Confidence 7665 556677776321 1111 111111 112334578999999999999999998 349999999999987
Q ss_pred CCCcccCCCCCcccccccCCeeEEEcC------CC--cEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEe-
Q 010200 204 SSSISVDSTPSATTLFTKGHLAKLDLS------DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEH- 274 (515)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~v~~~------~g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~- 274 (515)
+++. .+..+++++. +| .+++||+||+|||.+|.||+.+|....+..+...+....+..
T Consensus 172 ------~~~~-------~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~ 238 (639)
T 2dkh_A 172 ------DHGA-------ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAV 238 (639)
T ss_dssp ------CTTC-------SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEE
T ss_pred ------CCCC-------CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEc
Confidence 1110 1134666654 45 479999999999999999999988776655554433333221
Q ss_pred -ecCC-ceEEEEecCCCcEEEEecCCC-ceEEEEEcCC--CC-hHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 010200 275 -NKEN-YCAWQRFLPAGPIALLPIGDN-FSNIVWTMNP--KD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVD 348 (515)
Q Consensus 275 -~~~~-~~~~~~~~~~g~~~~~p~~~~-~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (515)
..+. ........+.++++++|.+++ ..++++.... +. .......+.+.+.+.+++.+. .|..
T Consensus 239 ~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~----------- 306 (639)
T 2dkh_A 239 TDFPDVRYKVAIQSEQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLH-PYKL----------- 306 (639)
T ss_dssp ECCTTTTSEEEEEETTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHT-TSCE-----------
T ss_pred cCCCccceeEEEEcCCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhC-cccC-----------
Confidence 1121 111211227889999999888 7777777654 11 112334667778777766543 1100
Q ss_pred chhccccCccccccccccCCcceEEeccceeeeccccccccccc------------cCcEEEEcccccccCCccccchhh
Q 010200 349 MFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYV------------SKRVVLIGDAAHTVHPLAGQGVNL 416 (515)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~------------~~~v~lvGDAAh~~~P~~G~G~n~ 416 (515)
.+ .....+..|++..+.+++|. .+||+|+|||||.++|+.|||+|+
T Consensus 307 ---------------------~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ 364 (639)
T 2dkh_A 307 ---------------------EV-KNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNF 364 (639)
T ss_dssp ---------------------EE-EEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHH
T ss_pred ---------------------cc-eeeeEEEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchh
Confidence 00 11112223555555566676 899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCC
Q 010200 417 GFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 472 (515)
Q Consensus 417 al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 472 (515)
||+||.+|++.|...++.. ....+|+.|+++|++++..++..++.+.++++..
T Consensus 365 ai~DA~nLawkLa~vl~g~---a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 365 SMQDSFNLGWKLAAVLRKQ---CAPELLHTYSSERQVVAQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp HHHHHHHHHHHHHHHHTTS---BCGGGGHHHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred hHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999988632 2367899999999999999999999998888664
No 11
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.6e-38 Score=336.98 Aligned_cols=353 Identities=22% Similarity=0.256 Sum_probs=244.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
..+||+||||||+||++|+.|++. |++|+||||.+.+. ..+++..++++++++|+.+|+.+.+.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~----G~~V~vlEr~~~~~----------~~~~~~~l~~~~~~~l~~lGl~~~~~~~ 90 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR----QVGHLVVEQTDGTI----------THPRVGTIGPRSMELFRRWGVAKQIRTA 90 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCSCC----------SSCCCCEECHHHHHHHHHTTCHHHHHTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCC----------CCCceeeeCHHHHHHHHHcCChHHHHhh
Confidence 458999999999999999999996 99999999998763 3345789999999999999999998876
Q ss_pred hccccc--eEEEEe-CCCccceeeecccC-------CCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCC
Q 010200 134 RHAYFD--KMQVWD-YTGLGYTKYNARDV-------NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPS 203 (515)
Q Consensus 134 ~~~~~~--~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~ 203 (515)
...... ...++. ..+.....++.... ......+.+++..+.+.|.+.+.+. |+++++|++++.
T Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~--- 163 (549)
T 2r0c_A 91 GWPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQ--- 163 (549)
T ss_dssp SCCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEE---
T ss_pred cCCcccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEE---
Confidence 552211 122222 12221122221110 1223457899999999999999865 899999999987
Q ss_pred CCCcccCCCCCcccccccCCeeEEEcCC---C--cEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecC-
Q 010200 204 SSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKE- 277 (515)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~- 277 (515)
+++.+++++.+ | .+++||+||+|||.+|.||+.+|.......+...++...++.+..
T Consensus 164 -----------------~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~ 226 (549)
T 2r0c_A 164 -----------------RDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELR 226 (549)
T ss_dssp -----------------CSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHH
T ss_pred -----------------eCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchH
Confidence 33457777654 6 379999999999999999999988777766666666666664311
Q ss_pred -----Cc-eEEEEecCC-CcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccch
Q 010200 278 -----NY-CAWQRFLPA-GPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMF 350 (515)
Q Consensus 278 -----~~-~~~~~~~~~-g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (515)
.. ..+..+.++ ++++++|++++. .+.+..+. ... ..+.+.+.+.+++.+.. +
T Consensus 227 ~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~~~~~~~~-~~~---~~~~~~~~~~l~~~~~~---~------------- 285 (549)
T 2r0c_A 227 SLLGERAALFFFLMLSSSLRFPLRALDGRG-LYRLTVGV-DDA---SKSTMDSFELVRRAVAF---D------------- 285 (549)
T ss_dssp HHHGGGCCSEEEEEEETTEEEEEEESSSSS-EEEEEEEC-STT---CCSCCCHHHHHHHHBCS---C-------------
T ss_pred HhcCCCCceEEEEECCCCcEEEEEEECCCc-EEEEEecC-CCC---CCCHHHHHHHHHHHhCC---C-------------
Confidence 11 223334566 678899986643 22333221 111 14556666666665431 0
Q ss_pred hccccCccccccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHH
Q 010200 351 SWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAE 430 (515)
Q Consensus 351 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~ 430 (515)
++-++.. ...|++..+.+++|..|||+|+|||||.++|+.|||+|+||+||.+|+++|..
T Consensus 286 ----------------~~~~~~~----~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~ 345 (549)
T 2r0c_A 286 ----------------TEIEVLS----DSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAA 345 (549)
T ss_dssp ----------------CCCEEEE----EEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------CceeEEE----EecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHH
Confidence 0001111 12366666678899999999999999999999999999999999999999999
Q ss_pred hHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCC---------CChHHHHHHHHHHhcc
Q 010200 431 GIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD---------FGPLNILRAAAFHGAQ 488 (515)
Q Consensus 431 ~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~~---------~~~~~~~r~~~~~~~~ 488 (515)
.++.. ....+|+.|+++|++++..++..+..+..++... ++....+|+.+...+.
T Consensus 346 ~l~g~---a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~ 409 (549)
T 2r0c_A 346 TLRGW---AGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVAEKLE 409 (549)
T ss_dssp HHHTC---SCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHHHHHHHH
T ss_pred HHcCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHHHHHHHH
Confidence 87643 2367899999999999999999999988877642 4556678887776664
No 12
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=5.9e-38 Score=320.20 Aligned_cols=335 Identities=21% Similarity=0.226 Sum_probs=234.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+||||||+||++|+.|++. |++|+||||.+.+. ...++++.+++++.++|+.+|+++ ...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~---------~~~~~g~~l~~~~~~~l~~~g~~~--~~~ 68 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA----GVDVDVYERSPQPL---------SGFGTGIVVQPELVHYLLEQGVEL--DSI 68 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC---------CCCSCEEECCHHHHHHHHHTTCCG--GGT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC----CCCEEEEecCCCCC---------CccccccccChhHHHHHHHcCCcc--ccc
Confidence 468999999999999999999996 99999999987641 123568899999999999999987 333
Q ss_pred hccccceEEEEeC-CCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 134 RHAYFDKMQVWDY-TGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 134 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
.. +...+.+++. .+......+. . ...+.+..+.+.|.+.+. + ++|+++++|++++.
T Consensus 69 ~~-~~~~~~~~~~~~g~~~~~~~~-----~--~~~~~~~~l~~~L~~~~~--~-~~i~~~~~v~~i~~------------ 125 (397)
T 2vou_A 69 SV-PSSSMEYVDALTGERVGSVPA-----D--WRFTSYDSIYGGLYELFG--P-ERYHTSKCLVGLSQ------------ 125 (397)
T ss_dssp CB-CCCEEEEEETTTCCEEEEEEC-----C--CCEEEHHHHHHHHHHHHC--S-TTEETTCCEEEEEE------------
T ss_pred cc-cccceEEEecCCCCccccccC-----c--ccccCHHHHHHHHHHhCC--C-cEEEcCCEEEEEEe------------
Confidence 33 5666777665 4432222221 1 124778899999998873 4 89999999999986
Q ss_pred CCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecCC--------ceEEEE
Q 010200 213 PSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN--------YCAWQR 284 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 284 (515)
.++.+++++.+|+++.+|+||+|||.+|.+|+.++ .......+...+.+.++..... ......
T Consensus 126 --------~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (397)
T 2vou_A 126 --------DSETVQMRFSDGTKAEANWVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYG 196 (397)
T ss_dssp --------CSSCEEEEETTSCEEEESEEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEE
T ss_pred --------cCCEEEEEECCCCEEECCEEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEE
Confidence 34568899999989999999999999999999997 4322222233344444422111 112223
Q ss_pred ecCCCcEEEEecCCC------ceEEEEEcCCCChHHhhc------------------CCHHHHHHHHHHhhcCCCCCCCC
Q 010200 285 FLPAGPIALLPIGDN------FSNIVWTMNPKDASDCKS------------------MNEDDFVKILNHALDYGYGPHPK 340 (515)
Q Consensus 285 ~~~~g~~~~~p~~~~------~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 340 (515)
+.+++++.++|++++ ..+++|+.+.+....... .+.+. ...+.+.+...|.+
T Consensus 197 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--- 272 (397)
T 2vou_A 197 LLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHN-LRQFHSKGESLFKP--- 272 (397)
T ss_dssp EETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHH-HHHHHHHHTTSCHH---
T ss_pred ecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHH-HHHHHHHHHhhChH---
Confidence 456677888888763 567777765443111100 02222 23333322111111
Q ss_pred CCCCCcccchhccccCccccccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHH
Q 010200 341 SISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGD 420 (515)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~d 420 (515)
+... +........+|+.....++|..|||+|||||||.|+|+.|||+|+||+|
T Consensus 273 ---------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~D 325 (397)
T 2vou_A 273 ---------FRDL------------------VLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDD 325 (397)
T ss_dssp ---------HHHH------------------HHHCSSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHH
T ss_pred ---------HHHH------------------HhccCCcceeeeeeecCCceecCcEEEEeccccccCCcchhhHHHHHHH
Confidence 1110 0111112245666666788999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCC
Q 010200 421 ASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 472 (515)
Q Consensus 421 a~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 472 (515)
|..|++.|.. ..+. ..+|+.|+++|++++..++..++.+..+++..
T Consensus 326 A~~La~~L~~----~~~~--~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 326 ARTLAEVFTK----NHDL--RGSLQSWETRQLQQGHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp HHHHHHHHHH----CSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhc----CCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999975 2233 78999999999999999999999999988764
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=2.5e-38 Score=321.00 Aligned_cols=324 Identities=20% Similarity=0.213 Sum_probs=231.7
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
..+||+||||||+|+++|+.|++. |++|+||||.+.++. .+++..+++++.++|+.+|+++.+...
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~----G~~v~viE~~~~~~~----------~~~~~~l~~~~~~~l~~~g~~~~~~~~ 75 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQN----GWDVRLHEKSSELRA----------FGAGIYLWHNGLRVLEGLGALDDVLQG 75 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSCCC----------CSSEEEEEHHHHHHHHHTTCHHHHHTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCCCCC----------CCceEEeCccHHHHHHHcCCHHHHHhh
Confidence 468999999999999999999996 999999999987632 355899999999999999999998876
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
.. ....+.+++. +.....++.. ....+.++|..|.+.|.+.+.+.| ++|+++++|++++.
T Consensus 76 ~~-~~~~~~~~~~-g~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~------------- 135 (379)
T 3alj_A 76 SH-TPPTYETWMH-NKSVSKETFN----GLPWRIMTRSHLHDALVNRARALG-VDISVNSEAVAADP------------- 135 (379)
T ss_dssp CB-CCSCEEEEET-TEEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTT-CEEESSCCEEEEET-------------
T ss_pred CC-CccceEEEeC-CceeeeccCC----CCceEEECHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe-------------
Confidence 55 6677777776 4332223221 223588999999999999999887 99999999999963
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEee-----cC-CceEEE---E
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN-----KE-NYCAWQ---R 284 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~---~ 284 (515)
+. +|++.+|+++.+|+||+|||.+|.+|+.++........+..++.+.++.. .. .....+ .
T Consensus 136 ---------~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (379)
T 3alj_A 136 ---------VG-RLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF 205 (379)
T ss_dssp ---------TT-EEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC
T ss_pred ---------CC-EEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceE
Confidence 22 67778888999999999999999999999764333333444455555552 11 122333 4
Q ss_pred ecCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCcccccccc
Q 010200 285 FLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 364 (515)
Q Consensus 285 ~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (515)
+.++++++++|++++..++++.....+.. ++.+.+.+..... +.+. ..+.+... .
T Consensus 206 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~----~~~~-----~~~~l~~~----~------ 260 (379)
T 3alj_A 206 WPRVQRILYSPCNENELYLGLMAPAADPR------GSSVPIDLEVWVE----MFPF-----LEPCLIEA----A------ 260 (379)
T ss_dssp SSSCCEEEEEECSSSEEEEEEEECTTCTT------TTCSSCCHHHHHH----HCGG-----GHHHHHHH----H------
T ss_pred ECCCCEEEEEECCCCcEEEEEEecCCCCC------HHHHHHHHhcCCc----hhcc-----HHHHHhhC----C------
Confidence 56889999999999887777766542110 0000000000000 0000 00001000 0
Q ss_pred ccCCcceEEeccceeeeccccc-cccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHH
Q 010200 365 FEVPPRVVKLASERMVFPLSLK-HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 443 (515)
Q Consensus 365 ~~i~~~~~~~~~~~~~~p~~~~-~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~a 443 (515)
......+++... ..++|..++|+|||||||.++|+.|||+|+||+||..|++.|... .+. ..+
T Consensus 261 ----------~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~----~~~--~~~ 324 (379)
T 3alj_A 261 ----------KLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG----SSV--EDA 324 (379)
T ss_dssp ----------TCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS----SCH--HHH
T ss_pred ----------ccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc----cCH--HHH
Confidence 001112444442 367888999999999999999999999999999999999999752 233 789
Q ss_pred HHHHHHHhhHHHHHHHHHH
Q 010200 444 LKKYEAERKPANIVMMAVL 462 (515)
Q Consensus 444 l~~Y~~~r~~~~~~~~~~s 462 (515)
|+.|+++|++++..++..+
T Consensus 325 l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 325 LVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999888
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=2.5e-37 Score=316.88 Aligned_cols=338 Identities=18% Similarity=0.201 Sum_probs=228.4
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcE-EEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLS-VAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~-V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
+.++||+||||||+||++|+.|++. |++ |+||||.+.++ ..++++.++++++++|+.+|+++.+.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~----G~~~v~v~E~~~~~~----------~~g~g~~l~~~~~~~l~~lg~~~~l~ 67 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQA----GIGKVTLLESSSEIR----------PLGVGINIQPAAVEALAELGLGPALA 67 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT----TCSEEEEEESSSSCC----------CCSCEEEECHHHHHHHHHTTCHHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCCCcc----------cceeEEEEChHHHHHHHHCCChHHHH
Confidence 3468999999999999999999996 999 99999998763 24558999999999999999999988
Q ss_pred hhhccccceEEEEeCCCccceeeeccc-CCCCcceEEechHHHHHHHHHHHhcC-CCceEEcCCeeEEEEeCCCCCCccc
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARD-VNKEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISV 209 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~-g~v~i~~~~~v~~i~~~~~~~~~~~ 209 (515)
.... +...+.+++..+......+... .......+.++|..|.+.|.+.+.+. |.++|+++++|++++.
T Consensus 68 ~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~--------- 137 (410)
T 3c96_A 68 ATAI-PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE--------- 137 (410)
T ss_dssp HHSE-EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE---------
T ss_pred hhCC-CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec---------
Confidence 7655 5566666665443322222111 11223357899999999999999763 6468999999999963
Q ss_pred CCCCCcccccccCCeeEEEcCC---C--cEEEeeEEEEecCCCchhhhhcCCccccccCCce-EEEEEEEeecC-CceEE
Q 010200 210 DSTPSATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQN-AIICTVEHNKE-NYCAW 282 (515)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 282 (515)
++.+++.+.+ | .++.||+||+|||.+|.+|+.++.......+... .+.+..+.... .....
T Consensus 138 ------------~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 205 (410)
T 3c96_A 138 ------------RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTM 205 (410)
T ss_dssp ------------ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSEE
T ss_pred ------------CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCeE
Confidence 1346677655 6 4799999999999999999999654332233222 22233333221 12233
Q ss_pred EEec--CCCcEEEEecCC-----CceEEEEEcCCCChH--------H-hhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 010200 283 QRFL--PAGPIALLPIGD-----NFSNIVWTMNPKDAS--------D-CKSMNEDDFVKILNHALDYGYGPHPKSISSGS 346 (515)
Q Consensus 283 ~~~~--~~g~~~~~p~~~-----~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (515)
..+. ++++++++|+.+ +...+.|........ . ......+.+. +.|. .|..... ..
T Consensus 206 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~-~~~~~~~----~~ 276 (410)
T 3c96_A 206 IVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVL----PFFA-DWDLGWF----DI 276 (410)
T ss_dssp EEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHH----HHHT-TCCBTTB----CH
T ss_pred EEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHH----HHhc-CCCCchh----HH
Confidence 3343 467889999863 445555554322111 0 0112223333 3333 2321100 00
Q ss_pred ccchhccccCccccccccccCCcceEEeccceeeeccccc-cccccccCcEEEEcccccccCCccccchhhcHHHHHHHH
Q 010200 347 VDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLK-HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLS 425 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~-~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La 425 (515)
.+.+. .......+|+... ..++|..+||+|||||||.|+|+.|||+|+||+||..|+
T Consensus 277 ~~~i~----------------------~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La 334 (410)
T 3c96_A 277 RDLLT----------------------RNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELA 334 (410)
T ss_dssp HHHHH----------------------TCSEEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHH
T ss_pred HHHHh----------------------cCcccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHH
Confidence 00111 1111223555443 357899999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHH
Q 010200 426 RIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLD 463 (515)
Q Consensus 426 ~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~ 463 (515)
+.|... + + ...+|+.|+++|++++..++..++
T Consensus 335 ~~L~~~---~-~--~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 335 AALARN---A-D--VAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHHC---S-S--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcc---C-C--HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999873 2 2 378999999999999999988877
No 15
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=1.2e-36 Score=323.13 Aligned_cols=353 Identities=15% Similarity=0.160 Sum_probs=251.8
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
++.++||+||||||+|+++|+.|++. |++|+|||+.+.+. ...+..+.+.+..+++.+|+++.+.
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~----G~~V~LiEr~~~~~-----------~~~G~~l~p~~~~~l~~lGl~~~l~ 84 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKL----GHDVTIYERSAFPR-----------YRVGESLLPGTMSILNRLGLQEKID 84 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCSSC-----------CCCCCBCCHHHHHHHHHTTCHHHHH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcC----CCCEEEEcCCCCCC-----------CceeeeECHHHHHHHHHcCCcHHHH
Confidence 34579999999999999999999996 99999999997652 1236788999999999999999887
Q ss_pred hhhccccceEEEEeCCCccceeeecccCC----CCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCc
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVN----KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSI 207 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~ 207 (515)
...........+..........+...... ....++.++|..+...|.+.+++.| ++++++++|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~V~~v~~------- 156 (591)
T 3i3l_A 85 AQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRG-ITVHEETPVTDVDL------- 156 (591)
T ss_dssp HHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEC-------
T ss_pred hcCCcccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------
Confidence 76543333333332222222222211111 2345688999999999999999987 99999999999976
Q ss_pred ccCCCCCcccccccCCeeEEEcC-CC--cEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeec-----CCc
Q 010200 208 SVDSTPSATTLFTKGHLAKLDLS-DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK-----ENY 279 (515)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~v~~~-~g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~ 279 (515)
+++..+.|.+. +| .++.||+||+|||.+|.+|+.++.......+....++..+.... ...
T Consensus 157 ------------~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~ 224 (591)
T 3i3l_A 157 ------------SDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKG 224 (591)
T ss_dssp ------------CSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTT
T ss_pred ------------cCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCC
Confidence 12345667766 66 47999999999999999999998765444444455555554321 124
Q ss_pred eEEEEecCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccc
Q 010200 280 CAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATL 359 (515)
Q Consensus 280 ~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (515)
..+..+.+.|++|++|+.++..++.|....+........+.+.+.+.+...++ .+...+....
T Consensus 225 ~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p----------------~l~~~l~~~~- 287 (591)
T 3i3l_A 225 TTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCA----------------KAMDILGGAE- 287 (591)
T ss_dssp CEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCH----------------HHHHHHTTCE-
T ss_pred ceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCH----------------HHHHHHhcCc-
Confidence 56667779999999999999888888876655444334455666665554222 1111111100
Q ss_pred cccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcc
Q 010200 360 SAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIG 439 (515)
Q Consensus 360 ~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~ 439 (515)
.......++.......+|..+++++||||||+++|+.|||+|+|++||..|+++|...+..+. .
T Consensus 288 --------------~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~--~ 351 (591)
T 3i3l_A 288 --------------QVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGD--E 351 (591)
T ss_dssp --------------ECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGG--G
T ss_pred --------------cccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCc--h
Confidence 001111122222245678889999999999999999999999999999999999999876542 2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHH--HhhcCC
Q 010200 440 EASLLKKYEAERKPANIVMMAVLDGFQ--KAYSVD 472 (515)
Q Consensus 440 ~~~al~~Y~~~r~~~~~~~~~~s~~~~--~~~~~~ 472 (515)
...+++.|++.|+++...+.++...++ ......
T Consensus 352 ~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ 386 (591)
T 3i3l_A 352 KDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEP 386 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 367899999999999999999999888 444443
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=4.8e-36 Score=315.72 Aligned_cols=385 Identities=15% Similarity=0.122 Sum_probs=258.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHH-HHHHcCCchhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQYVQQ 132 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~lgl~~~~~~ 132 (515)
.++||+||||||+||++|+.|++. |++|+||||.+.+.. ..+..+.+.... +++.+|+++.+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~----G~~V~liE~~~~~~~-----------~~g~~~~~~~~~~~l~~lgl~~~~~~ 70 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR----GHRVLLLEREAFPRH-----------QIGESLLPATVHGICAMLGLTDEMKR 70 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCSSCC-----------CSCCBCCHHHHTTHHHHTTCHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC----CCCEEEEccCCCCCC-----------CCCcccCcchHHHHHHHhCcHHHHHH
Confidence 468999999999999999999996 999999999985521 224566777665 8999999988877
Q ss_pred hhccccceEEEEeCCCccc--eeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccC
Q 010200 133 HRHAYFDKMQVWDYTGLGY--TKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVD 210 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~ 210 (515)
..........+........ ..+..........++.++|..|...|.+.+++.| ++|+++++|++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~~~~V~~v~~---------- 139 (512)
T 3e1t_A 71 AGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKG-VDVRERHEVIDVLF---------- 139 (512)
T ss_dssp TTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE----------
T ss_pred cCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE----------
Confidence 6553333222222222111 1222222233455788999999999999999987 99999999999986
Q ss_pred CCCCcccccccCC---eeEEEcCCCc--EEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEee----cCC-ce
Q 010200 211 STPSATTLFTKGH---LAKLDLSDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----KEN-YC 280 (515)
Q Consensus 211 ~~~~~~~~~~~~~---~~~v~~~~g~--~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~ 280 (515)
.++ .+++...+|+ ++.||+||+|||.+|.+|+.++.......+...++++.+... .+. ..
T Consensus 140 ----------~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 209 (512)
T 3e1t_A 140 ----------EGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGN 209 (512)
T ss_dssp ----------ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTS
T ss_pred ----------ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCc
Confidence 222 3666677785 799999999999999999999765555555666777666532 111 34
Q ss_pred EEEEecCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCcccc
Q 010200 281 AWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLS 360 (515)
Q Consensus 281 ~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (515)
.+..+.+.|++|++|+.++..++.|....+..... ..+.++....+....+ .+..++.....
T Consensus 210 ~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~-~~~~~~~~~~~l~~~p----------------~~~~~l~~~~~- 271 (512)
T 3e1t_A 210 ILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAI-KDGHEAALLRYIDRCP----------------IIKEYLAPATR- 271 (512)
T ss_dssp EEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTTT-SSCHHHHHHHHHHTSH----------------HHHHHHTTCEE-
T ss_pred eEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhhh-cCCHHHHHHHHHHhCc----------------hHHHHHhcCcc-
Confidence 56667789999999999998888888754332221 1223333333322111 11111110000
Q ss_pred ccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcch
Q 010200 361 AKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGE 440 (515)
Q Consensus 361 ~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~ 440 (515)
.....- ......+......++|..++|+|||||||+++|+.|||+|+|++||..|++.|...+.... ..
T Consensus 272 ---~~~~~~------~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~--~~ 340 (512)
T 3e1t_A 272 ---VTTGDY------GEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEM--SE 340 (512)
T ss_dssp ---CCSSTT------SSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCS--CH
T ss_pred ---cccccc------ccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCc--cH
Confidence 000000 0000011111135677789999999999999999999999999999999999999876443 34
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHHHhhcCCCC
Q 010200 441 ASLLKKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQRL 507 (515)
Q Consensus 441 ~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~ 507 (515)
..+|+.|++.|+++...+..+...++.+....+.+... ..+.+...+...+.++..+.|.-..
T Consensus 341 ~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~ds~fW~----~~~~~~~~~~~~~~f~~~~~g~~~~ 403 (512)
T 3e1t_A 341 QRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYFWS----ARKIINTEERANEAFVRLIAGRSNL 403 (512)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCHHHH----TSSCCCSHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHH----HHhhhccCcHHHHHHHHHHcCCCCh
Confidence 78999999999999999999999888877644332211 1122333456667777777666543
No 17
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.9e-36 Score=303.73 Aligned_cols=338 Identities=17% Similarity=0.162 Sum_probs=224.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
++|||+|||||||||++|+.|+++ |++|+||||.+.++.. ...|..+.+. +++.+++.......
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~----G~~V~v~Er~~~~~~~---------~~~g~~l~~~---~l~~l~~~~~~~~~ 66 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKY----GLKTLMIEKRPEIGSP---------VRCGEGLSKG---ILNEADIKADRSFI 66 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSTTCS---------CCSCCEEETH---HHHHTTCCCCTTTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCCCCC---------CceecccCHH---HHHHcCCCchhhhh
Confidence 469999999999999999999996 9999999998876321 1124455543 56677764432222
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
.. .+....++...+.....+.. .......++.++|..+...|.+.+.+.| ++++++++|+++..
T Consensus 67 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~R~~~~~~L~~~a~~~G-~~~~~~~~v~~~~~------------- 130 (397)
T 3oz2_A 67 AN-EVKGARIYGPSEKRPIILQS-EKAGNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK------------- 130 (397)
T ss_dssp EE-EESEEEEECTTCSSCEEEEC-SSSSCCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE-------------
T ss_pred hc-ccceEEEEeCCCceEeeccc-cccCCceeEEEEHHHHHHHHHHHHHhcC-cEEeeeeeeeeeee-------------
Confidence 22 45666777665544444332 2234556789999999999999999998 99999999999876
Q ss_pred CcccccccCCee-EEEc-CCC--cEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecC---CceEEEEe-
Q 010200 214 SATTLFTKGHLA-KLDL-SDG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKE---NYCAWQRF- 285 (515)
Q Consensus 214 ~~~~~~~~~~~~-~v~~-~~g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 285 (515)
++..+ .+.. .++ .+++||+||+|||.+|.+|+.++.......+........+..... .+.....+
T Consensus 131 -------~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (397)
T 3oz2_A 131 -------ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLG 203 (397)
T ss_dssp -------ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECS
T ss_pred -------ccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeee
Confidence 22222 2222 233 379999999999999999999987766655555554444443322 12222222
Q ss_pred --cCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccc
Q 010200 286 --LPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKE 363 (515)
Q Consensus 286 --~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (515)
.+.++.|++|.+++..++.+........ ........+.+.+. . .+.+..
T Consensus 204 ~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~-----~~~~~~~~l~~~~~-~------------~~~l~~----------- 254 (397)
T 3oz2_A 204 SIAPAGYIWVFPKGEGMANVGIGSSINWIH-----NRFELKNYLDRFIE-N------------HPGLKK----------- 254 (397)
T ss_dssp TTSTTEEEEEEEEETTEEEEEEEEETTTSC-----SHHHHHHHHHHHHH-T------------CHHHHT-----------
T ss_pred ccCCCceEEEeecccceeEEEEeeccchhh-----hhhhHHHHHHHHHH-h------------Cccccc-----------
Confidence 3678899999999888887765443221 12222222222111 0 000000
Q ss_pred cccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHH
Q 010200 364 CFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 443 (515)
Q Consensus 364 ~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~a 443 (515)
........ ...|+. ....+|..++|+|+|||||.++|++|||+|+||+||..||+.|.++++.++. ...+
T Consensus 255 -----~~~~~~~~--~~~~~~-~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~--~~~~ 324 (397)
T 3oz2_A 255 -----GQDIQLVT--GGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQM 324 (397)
T ss_dssp -----SEEEEEEE--EEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHH
T ss_pred -----cceeeeee--cccccc-CcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCc--cHHH
Confidence 00011110 012221 1234567899999999999999999999999999999999999999987742 3789
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhh
Q 010200 444 LKKYEAERKPANIVMMAVLDGFQKAY 469 (515)
Q Consensus 444 l~~Y~~~r~~~~~~~~~~s~~~~~~~ 469 (515)
|+.|++.++++..+...........+
T Consensus 325 L~~Ye~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 325 MQKYEKLIKERFERKHLRNWVAKEKL 350 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888776665555444443
No 18
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=9.1e-37 Score=311.52 Aligned_cols=351 Identities=19% Similarity=0.190 Sum_probs=233.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCH-hHHHHHHHcCCchhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTP-ATISFFKEIGAWQYVQ 131 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~lgl~~~~~ 131 (515)
+.++||+||||||+||++|+.|++. |++|+||||.+.+..+ ..+.++.+.+ .+.++|+.+|+++.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~~~--------~~g~~~~~~~~~~~~~l~~~gl~~~~~ 91 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN----GIDVSVYERDNDREAR--------IFGGTLDLHKGSGQEAMKKAGLLQTYY 91 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT----TCEEEEEECSSSTTCC--------CCSCCEECCTTTHHHHHHHTTCHHHHH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCcccc--------ccCCeeeeCCccHHHHHHhcChHHHHH
Confidence 4568999999999999999999996 9999999999866322 2234556654 5688999999999988
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
.... +... .+++..+........... .......++|..|.+.|.+.+.+ ++|+++++|++++.
T Consensus 92 ~~~~-~~~~-~~~~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~----------- 154 (398)
T 2xdo_A 92 DLAL-PMGV-NIADEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEP----------- 154 (398)
T ss_dssp HHCB-CCCE-EEECSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEE-----------
T ss_pred Hhhc-ccce-EEECCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEE-----------
Confidence 7654 3333 555544432222200110 11122468999999999988753 57899999999986
Q ss_pred CCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeec---C------CceEE
Q 010200 212 TPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---E------NYCAW 282 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~ 282 (515)
+++.++|++.+|+++.+|+||+|||.+|.+|+.++... ....+..++.+.++... + ....+
T Consensus 155 ---------~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (398)
T 2xdo_A 155 ---------GKKKWTLTFENKPSETADLVILANGGMSKVRKFVTDTE-VEETGTFNIQADIHQPEINCPGFFQLCNGNRL 224 (398)
T ss_dssp ---------CSSSEEEEETTSCCEEESEEEECSCTTCSCCTTTCCCC-CEEEEEEEEEEEESSHHHHSHHHHHHHTTSEE
T ss_pred ---------CCCEEEEEECCCcEEecCEEEECCCcchhHHhhccCCC-ceEcceEEEEEEeCchhccCchhHhhcCCceE
Confidence 33568899999988999999999999999999986321 11112333444443210 0 11222
Q ss_pred EEecCCCcEEEEecCCCceEEEEEcCCCC-hHH---hhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCcc
Q 010200 283 QRFLPAGPIALLPIGDNFSNIVWTMNPKD-ASD---CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDAT 358 (515)
Q Consensus 283 ~~~~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (515)
..+.++..+.++|.+++..++++....+. ... ....+.+.+.+.+.+.|. .|.+. ..+.+..
T Consensus 225 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-------~~~~~~~------ 290 (398)
T 2xdo_A 225 MASHQGNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDER-------YKELIHT------ 290 (398)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHH-------HHHHHHH------
T ss_pred EEecCCCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHc-CCChH-------HHHHHhC------
Confidence 33456666777888888777776653322 111 112356777777777665 34322 1111111
Q ss_pred ccccccccCCcceEEeccceeeecccccc-cccccc-C--cEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhc
Q 010200 359 LSAKECFEVPPRVVKLASERMVFPLSLKH-ANNYVS-K--RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 434 (515)
Q Consensus 359 ~~~~~~~~i~~~~~~~~~~~~~~p~~~~~-~~~~~~-~--~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~ 434 (515)
......+++...+ ..+|.. + ||+|+|||||.++|+.|||+|+||+||..|+++|...
T Consensus 291 ----------------~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--- 351 (398)
T 2xdo_A 291 ----------------TLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--- 351 (398)
T ss_dssp ----------------CSCCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC---
T ss_pred ----------------cccceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc---
Confidence 0001112222222 246654 5 8999999999999999999999999999999999874
Q ss_pred CCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHH-hhcCCCChH
Q 010200 435 GADIGEASLLKKYEAERKPANIVMMAVLDGFQK-AYSVDFGPL 476 (515)
Q Consensus 435 ~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~-~~~~~~~~~ 476 (515)
..+. ...+|+.|+++|++++..++..+..... ++..+.++.
T Consensus 352 ~~~~-~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~ 393 (398)
T 2xdo_A 352 KFNS-IEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPDFTFQ 393 (398)
T ss_dssp CSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-
T ss_pred cCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 2231 3789999999999999999998877664 566555443
No 19
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.6e-35 Score=303.08 Aligned_cols=338 Identities=12% Similarity=0.110 Sum_probs=239.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+||||||+|+++|+.|++. |++|+|+||.+.++ ...|..+.+.+..+++.+|+++.+.+.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~----G~~V~v~E~~~~~~-----------~~~g~~~~~~~~~~l~~~g~~~~~~~~ 68 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS----GFKVKIVEKQKFPR-----------FVIGESLLPRCMEHLDEAGFLDAVKAQ 68 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCSSC-----------CCSCCBCCGGGHHHHHHTTCHHHHHHT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC-----------CcccCcccHhHHHHHHHcCChHHHHHc
Confidence 458999999999999999999996 99999999998663 133667889999999999999998887
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
.......+.+..........+..........++.++|..+...|.+.+.+.| ++|+++++|++++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~g-v~i~~~~~v~~i~~~------------ 135 (421)
T 3nix_A 69 GFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQG-VDVEYEVGVTDIKFF------------ 135 (421)
T ss_dssp TCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHT-CEEECSEEEEEEEEE------------
T ss_pred CCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEEe------------
Confidence 6544555555444333233332222233455789999999999999999887 999999999999860
Q ss_pred CcccccccCCeeEEEcCCCc--EEEeeEEEEecCCCchhhhhcCCccccccCCceEEEEEEEeecCC-----c-eEE--E
Q 010200 214 SATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN-----Y-CAW--Q 283 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~--~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~--~ 283 (515)
++...+.+.+.+|+ ++.||+||+|||.+|.+|+.++.......+....++..+...... . ..+ .
T Consensus 136 ------~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (421)
T 3nix_A 136 ------GTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAV 209 (421)
T ss_dssp ------TTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEE
T ss_pred ------CCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEE
Confidence 11233566678887 799999999999999999999887766666667777666543221 1 111 1
Q ss_pred EecCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccc
Q 010200 284 RFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKE 363 (515)
Q Consensus 284 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (515)
...+.+++|++|.+++..++.+....+..... ..+.+++...+...++ .+...+....
T Consensus 210 ~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~-~~~~~~~l~~~~~~~p----------------~~~~~l~~~~----- 267 (421)
T 3nix_A 210 VHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEY-TGTPEERMRAMIANEG----------------HIAERFKSEE----- 267 (421)
T ss_dssp EEETTEEEEEEECTTSEEEEEEEECHHHHTTS-CSCHHHHHHHHHHTCT----------------TTHHHHTTCC-----
T ss_pred eCCCCEEEEEEEECCCCEEEEEEecHHHhhhc-CCCHHHHHHHHHHhCc----------------HHHHHHhcCc-----
Confidence 22377899999999999888888755332211 2245555555544221 1111111100
Q ss_pred cccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHH
Q 010200 364 CFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 443 (515)
Q Consensus 364 ~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~a 443 (515)
.......++.......+|..+++++||||||.++|+.|||+|+|++||..|++.|.+.+..+. ...
T Consensus 268 ----------~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~----~~~ 333 (421)
T 3nix_A 268 ----------FLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEE----VNW 333 (421)
T ss_dssp ----------BSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCC----CCH
T ss_pred ----------cccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCc----hhH
Confidence 001122344444456778889999999999999999999999999999999999999876542 235
Q ss_pred HHHHHHHhhHHHHHHHHH
Q 010200 444 LKKYEAERKPANIVMMAV 461 (515)
Q Consensus 444 l~~Y~~~r~~~~~~~~~~ 461 (515)
++.|.+.++.........
T Consensus 334 ~~~y~~~~~~~~~~~~~~ 351 (421)
T 3nix_A 334 EKDFVEHMMQGIDTFRSF 351 (421)
T ss_dssp HHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 678888876655544443
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=3.4e-34 Score=292.19 Aligned_cols=340 Identities=17% Similarity=0.169 Sum_probs=230.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+||||||+|+++|+.|++. |++|+||||.+.++.. ...+..+. .+.++.+|+++.....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~----G~~V~l~E~~~~~g~~---------~~~~~~~~---~~~~~~lg~~~~~~~~ 66 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY----GLKTLMIEKRPEIGSP---------VRCGEGLS---KGILNEADIKADRSFI 66 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSTTCS---------CCSCCEEE---THHHHHTTCCCCTTTE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCCCC---------cccccccC---HHHHHHcCCCCChHHh
Confidence 358999999999999999999996 9999999999866321 11122333 3677888886653222
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
......+.+++..+.....+..... ....++.++|..|.+.|.+.+.+.| ++|+++++|++++.
T Consensus 67 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~------------- 130 (397)
T 3cgv_A 67 -ANEVKGARIYGPSEKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK------------- 130 (397)
T ss_dssp -EEEESEEEEECTTCSSCEEEC------CCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE-------------
T ss_pred -hhhcceEEEEcCCCCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhCC-CEEEECCEEEEEEE-------------
Confidence 2255667777665443234433222 2446789999999999999999887 99999999999986
Q ss_pred CcccccccCCeeE-EEc---CCCcEEEeeEEEEecCCCchhhhhcCCcc-ccccC-CceEEEEEEEeecCCceEEEEe--
Q 010200 214 SATTLFTKGHLAK-LDL---SDGTSLYAKLVVGADGGKSRVRELAGFKT-TGWSY-SQNAIICTVEHNKENYCAWQRF-- 285 (515)
Q Consensus 214 ~~~~~~~~~~~~~-v~~---~~g~~~~ad~vV~AdG~~S~vr~~l~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 285 (515)
.++.++ |.+ .++.++.||+||+|||.+|.+|+.++... ..... ...++...+......+.....+
T Consensus 131 -------~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (397)
T 3cgv_A 131 -------ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLG 203 (397)
T ss_dssp -------ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECS
T ss_pred -------eCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeC
Confidence 234444 555 34558999999999999999999997665 22111 1112222222222222233333
Q ss_pred --cCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccc
Q 010200 286 --LPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKE 363 (515)
Q Consensus 286 --~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (515)
.+.+++|++|.+++..++.+....... .......+.+.+.+. .. + .+..
T Consensus 204 ~~~~~g~~~~~P~~~~~~~vg~~~~~~~~-----~~~~~~~~~l~~~~~-~~-~-----------~~~~----------- 254 (397)
T 3cgv_A 204 SIAPAGYIWVFPKGEGMANVGIGSSINWI-----HNRFELKNYLDRFIE-NH-P-----------GLKK----------- 254 (397)
T ss_dssp TTSTTEEEEEEEEETTEEEEEEEEETTTC-----SCHHHHHHHHHHHHH-TC-H-----------HHHT-----------
T ss_pred CcCCCceEEEEECCCCeEEEEEEeccccc-----cCCCCHHHHHHHHHH-hC-c-----------CCCC-----------
Confidence 577899999999998888887755432 112222222322221 00 0 0000
Q ss_pred cccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHH
Q 010200 364 CFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 443 (515)
Q Consensus 364 ~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~a 443 (515)
..+... ....+|+. ...++|..++++++|||||.++|++|||+|+|++||..|++.|.+.+..+.. ...+
T Consensus 255 -----~~~~~~--~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~--~~~~ 324 (397)
T 3cgv_A 255 -----GQDIQL--VTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQM 324 (397)
T ss_dssp -----SEEEEE--EEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHH
T ss_pred -----CeEEee--eeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCc--cHHH
Confidence 001111 12235553 2467788899999999999999999999999999999999999998866543 3789
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhcC
Q 010200 444 LKKYEAERKPANIVMMAVLDGFQKAYSV 471 (515)
Q Consensus 444 l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 471 (515)
|+.|++.|+++..+.+..++.+.+++..
T Consensus 325 l~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 3cgv_A 325 MQKYEKLIKERFERKHLRNWVAKEKLAM 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998887654
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.7e-34 Score=299.64 Aligned_cols=335 Identities=17% Similarity=0.160 Sum_probs=225.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+||||||+|+++|+.|++. |++|+||||.+.+... ....+..+ +.+.++.+|+.+.....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~----G~~V~vlE~~~~~~~g--------~~~~g~~l---~~~~l~~lg~~~~~~~~ 69 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR----GLKILLVDSKPWNRIG--------DKPCGDAV---SKAHFDKLGMPYPKGEE 69 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS----SCCEEEECSSCGGGTT--------CSCCCCEE---EHHHHHHTTCCCCCGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCCCC--------cccccccc---cHHHHHHhcCCCCchHH
Confidence 468999999999999999999996 9999999998865211 01112333 46788888876543322
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
.......+.++...+.....+ ...++.++|..|.+.|.+.+.+.| ++|+++++|++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~------------- 128 (453)
T 3atr_A 70 LENKINGIKLYSPDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDRG-VEIWDLTTAMKPIF------------- 128 (453)
T ss_dssp EEEEEEEEEEECTTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE-------------
T ss_pred HHhhhcceEEECCCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHcC-CEEEeCcEEEEEEE-------------
Confidence 222334455554433222221 123578999999999999999887 99999999999976
Q ss_pred CcccccccCCeeE-EEcC---CCc--EEEeeEEEEecCCCchhhhhcCCccc--cccC---CceEEEEEEEeecCC--ce
Q 010200 214 SATTLFTKGHLAK-LDLS---DGT--SLYAKLVVGADGGKSRVRELAGFKTT--GWSY---SQNAIICTVEHNKEN--YC 280 (515)
Q Consensus 214 ~~~~~~~~~~~~~-v~~~---~g~--~~~ad~vV~AdG~~S~vr~~l~~~~~--~~~~---~~~~~~~~~~~~~~~--~~ 280 (515)
+++.+. |.+. +|+ ++.||+||+|||.+|.+|+.++...+ ...+ ...++...+....+. ..
T Consensus 129 -------~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (453)
T 3atr_A 129 -------EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHD 201 (453)
T ss_dssp -------ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTT
T ss_pred -------ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCC
Confidence 223332 4333 665 79999999999999999999976532 1111 123344444444322 22
Q ss_pred EEEEe-----cCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhcccc
Q 010200 281 AWQRF-----LPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRG 355 (515)
Q Consensus 281 ~~~~~-----~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (515)
....+ .+++++|++|..++..++.+........ ....+.+.+.+.+..+ .|.. +
T Consensus 202 ~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~---~~~~~~~~~~l~~~~~-~~~~--------------~--- 260 (453)
T 3atr_A 202 YLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGY---PSIHEYYKKYLDKYAP-DVDK--------------S--- 260 (453)
T ss_dssp EEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCC---CCHHHHHHHHHHHHCT-TEEE--------------E---
T ss_pred eEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCC---CCHHHHHHHHHHhhhh-hcCC--------------C---
Confidence 22233 2678999999999888887776433210 0112344444433111 1100 0
Q ss_pred CccccccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcC
Q 010200 356 DATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 435 (515)
Q Consensus 356 ~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~ 435 (515)
.+.... ....|. ....++|..++++|+|||||.++|++|||+|+||+||..|+++|.+.+..+
T Consensus 261 --------------~~~~~~--~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~ 323 (453)
T 3atr_A 261 --------------KLLVKG--GALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETG 323 (453)
T ss_dssp --------------EEEEEE--EEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------eEEecc--ceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 011111 112333 235678888999999999999999999999999999999999999887654
Q ss_pred CCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcC
Q 010200 436 ADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSV 471 (515)
Q Consensus 436 ~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 471 (515)
. . ...+|+.|+++|++++...+..++.+.+++..
T Consensus 324 ~-~-~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 357 (453)
T 3atr_A 324 D-F-SASGLWDMNICYVNEYGAKQASLDIFRRFLQK 357 (453)
T ss_dssp C-C-STTTTTHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred C-c-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 25689999999999999999999888887654
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=5.3e-35 Score=296.68 Aligned_cols=337 Identities=13% Similarity=0.097 Sum_probs=216.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCc-hh-hhhh
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAW-QY-VQQH 133 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~-~~-~~~~ 133 (515)
+||+||||||+||++|+.|++.. +|++|+||||.+.+. ..++++.+++++++.+...+++ +. +...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~--~G~~V~v~E~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQAR--PLWAIDIVEKNDEQE----------VLGWGVVLPGRPGQHPANPLSYLDAPERLN 68 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSCTTC----------CCCSEEEEESCTTTCTTCGGGGSSCGGGGC
T ss_pred CeEEEECCCHHHHHHHHHHHhcC--CCCCEEEEECCCCCC----------cceeEEEeCcHHHHhhcCcchhhhhhHHHh
Confidence 48999999999999999999941 289999999998763 2345788888776622222233 33 3222
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
.. ....+.++.. +. .+ .. ......+.++|..|.+.|.+.+.+.| ++|+++++|++++.
T Consensus 69 ~~-~~~~~~~~~~-g~-~~--~~---~~~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~------------- 126 (381)
T 3c4a_A 69 PQ-FLEDFKLVHH-NE-PS--LM---STGVLLCGVERRGLVHALRDKCRSQG-IAIRFESPLLEHGE------------- 126 (381)
T ss_dssp CE-EECCEEEEES-SS-EE--EC---CCCSCEEEEEHHHHHHHHHHHHHHTT-CEEETTCCCCSGGG-------------
T ss_pred hc-cccceEEEeC-Ce-eE--Ee---cCCCceeeecHHHHHHHHHHHHHHCC-CEEEeCCEeccchh-------------
Confidence 22 3445555552 21 11 11 11223468999999999999999887 99999999998853
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcC----CccccccCCceEEEEEEEeecCCceEEEEecCCC
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAG----FKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAG 289 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 289 (515)
. .++.+|+||+|||.+|. |+.+. ...... +....+.+.... .+....+..+.+.|
T Consensus 127 -------~-----------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~g 185 (381)
T 3c4a_A 127 -------L-----------PLADYDLVVLANGVNHK-TAHFTEALVPQVDYG-RNKYIWYGTSQL-FDQMNLVFRTHGKD 185 (381)
T ss_dssp -------C-----------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCEEE-EEEEEEEEESSC-CSSEEEEEEEETTE
T ss_pred -------c-----------ccccCCEEEECCCCCch-HHhhhhhcCCCcccC-CccEEEEecCCC-CCcceeeEeeCCCc
Confidence 1 12579999999999999 99873 221110 112222222111 11212222334666
Q ss_pred cEE--EEecCCCceEEEEEcCCCCh--HHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccc
Q 010200 290 PIA--LLPIGDNFSNIVWTMNPKDA--SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECF 365 (515)
Q Consensus 290 ~~~--~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (515)
+++ ++|++++...+.+....+.. ......+.+.+.+.+.+.|. .|.+...
T Consensus 186 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~------------------------- 239 (381)
T 3c4a_A 186 IFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQ-AELGGHG------------------------- 239 (381)
T ss_dssp EEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTH-HHHTTCC-------------------------
T ss_pred EEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhc-ccCCCch-------------------------
Confidence 654 68998877544444322111 01123456677777777665 2221100
Q ss_pred cCCcceEEeccceeeecccc-ccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHH
Q 010200 366 EVPPRVVKLASERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLL 444 (515)
Q Consensus 366 ~i~~~~~~~~~~~~~~p~~~-~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al 444 (515)
++.... ..|++.. ...++|..++|+|||||||+++|+.|||+|+||+||..|+++|... .+ ...+|
T Consensus 240 -----l~~~~~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~----~~--~~~aL 306 (381)
T 3c4a_A 240 -----LVSQPG--LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE----DG--VPAAL 306 (381)
T ss_dssp -----CBCCTT--TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS----SS--HHHHH
T ss_pred -----hhcCCC--cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc----cc--HHHHH
Confidence 000000 0133322 3467899999999999999999999999999999999999999874 23 37899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcCC-----CChHHHHHHHHHHh
Q 010200 445 KKYEAERKPANIVMMAVLDGFQKAYSVD-----FGPLNILRAAAFHG 486 (515)
Q Consensus 445 ~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~r~~~~~~ 486 (515)
+.|+++|++++..++..++.+..++... .++....|+..++.
T Consensus 307 ~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 307 KRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARR 353 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHhhcc
Confidence 9999999999999999999988544331 24556678877766
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=100.00 E-value=7.2e-31 Score=276.62 Aligned_cols=363 Identities=12% Similarity=0.090 Sum_probs=231.5
Q ss_pred CccEEEECCCHHHHHHHHHHhc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchh--
Q 010200 55 QYDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY-- 129 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~-- 129 (515)
.+||||||||++|+++|+.|++ . |++|+|||+...+. .+.+..+.+....+++.+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~----G~~V~lvE~~~~~~-----------~~~g~~~~~~~~~~l~~lgi~~~~~ 66 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD----RIDVTLVESGNVRR-----------IGVGEATFSTVRHFFDYLGLDEREW 66 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG----GSEEEEEEC------------------CCEECCTTHHHHHHHHTCCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC----CCEEEEEecCCCCc-----------eeeccccCcchHHHHHHcCCCHHHH
Confidence 3799999999999999999999 7 89999999986441 22367788888999999999875
Q ss_pred hhhhhccccceEEEEeCCC--c------c------ceee------------e----------------------cccC--
Q 010200 130 VQQHRHAYFDKMQVWDYTG--L------G------YTKY------------N----------------------ARDV-- 159 (515)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~--~------~------~~~~------------~----------------------~~~~-- 159 (515)
+..........+.+.+... . . ...+ . ....
T Consensus 67 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (511)
T 2weu_A 67 LPRCAGGYKLGIRFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFAS 146 (511)
T ss_dssp HHHTTCEEECEEEEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC-
T ss_pred HHHcCCeEeccceecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccc
Confidence 4433221111222211100 0 0 0000 0 0000
Q ss_pred --C-----------C--CcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe
Q 010200 160 --N-----------K--EILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 224 (515)
Q Consensus 160 --~-----------~--~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (515)
. . ...++.++|..+...|.+.+.+.| ++++++ +|++++. + +++..
T Consensus 147 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~-----------~-------~~~~~ 206 (511)
T 2weu_A 147 QVDESLGRSTLAEQRAQFPYAYHFDADEVARYLSEYAIARG-VRHVVD-DVQHVGQ-----------D-------ERGWI 206 (511)
T ss_dssp -----CCSCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEE-----------C-------TTSCE
T ss_pred cccccccccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCC-CEEEEC-eEeEEEE-----------c-------CCCCE
Confidence 0 1 345688999999999999999887 999999 9999976 0 12234
Q ss_pred eEEEcCCCcEEEeeEEEEecCCCchhhh-hcCCccccc---cCCceEEEEEEEeecC---CceEEEEecCCCcEEEEecC
Q 010200 225 AKLDLSDGTSLYAKLVVGADGGKSRVRE-LAGFKTTGW---SYSQNAIICTVEHNKE---NYCAWQRFLPAGPIALLPIG 297 (515)
Q Consensus 225 ~~v~~~~g~~~~ad~vV~AdG~~S~vr~-~l~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~ 297 (515)
+.|.+.+|+++.+|+||+|||.+|.+++ .++.....+ ......+...+....+ .........+.+++|++|+.
T Consensus 207 ~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~ 286 (511)
T 2weu_A 207 SGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLF 286 (511)
T ss_dssp EEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECS
T ss_pred EEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECC
Confidence 6788888888999999999999999965 456543221 2223344444443322 22234456688999999998
Q ss_pred CCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEeccc
Q 010200 298 DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 377 (515)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 377 (515)
+ ...+.+..... ..+.++..+.+.+.+. +.+.. ..
T Consensus 287 ~-~~~~g~~~~~~------~~~~~~~~~~l~~~~~--~~~~~------------------------------------~~ 321 (511)
T 2weu_A 287 K-RDGNGYVYSDE------FISPEEAERELRSTVA--PGRDD------------------------------------LE 321 (511)
T ss_dssp S-EEEEEEEECTT------TSCHHHHHHHHHHHHC--TTCTT------------------------------------SC
T ss_pred C-ceEEEEEECCC------CCCHHHHHHHHHHHhC--ccccc------------------------------------cc
Confidence 7 34444433321 1345566666666552 11110 00
Q ss_pred eeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHH
Q 010200 378 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 457 (515)
Q Consensus 378 ~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~ 457 (515)
...+++.....+++..+|++|||||||.++|+.|||+|+|++||..|+++|.. +.+ ...+|+.|++.|+++...
T Consensus 322 ~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~----~~~--~~~~l~~Y~~~~~~~~~~ 395 (511)
T 2weu_A 322 ANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG----ERW--DPVLISAYNERMAHMVDG 395 (511)
T ss_dssp CEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc----CCC--CHHHHHHHHHHHHHHHHH
Confidence 00122222234566679999999999999999999999999999999999874 122 267999999999999999
Q ss_pred HHHHHHHHHHhhcCC-CChHHHHHHHHHHhcccChhHHHHHHHHhhcCCCCC
Q 010200 458 MMAVLDGFQKAYSVD-FGPLNILRAAAFHGAQYISPLKRNIISYASGEQRLP 508 (515)
Q Consensus 458 ~~~~s~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 508 (515)
+.........+.... .+++...+ .+..-+.++..+-....+....+
T Consensus 396 ~~~~~~~~y~~~~r~~~~fw~~~~-----~~~~p~~l~~~~~~~~~~~~~~~ 442 (511)
T 2weu_A 396 VKEFLVLHYKGAQREDTPYWKAAK-----TRAMPDGLARKLELSASHLLDEQ 442 (511)
T ss_dssp HHHHHHHHHHHCCCCCSHHHHHHH-----HSCCCTTHHHHHHHHTTSCCCTT
T ss_pred HHHHHHHHhhhcCCCCcHHHHhcc-----cCCCCHHHHHHHHHHHhCCCccc
Confidence 988887777765543 33444333 12222345555555544444433
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=2.3e-31 Score=280.94 Aligned_cols=336 Identities=15% Similarity=0.128 Sum_probs=222.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhc------------CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHH
Q 010200 54 DQYDVAVVGGGMVGMALACSLAS------------MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFF 121 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~------------~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 121 (515)
..+||+||||||||+++|+.|++ . |++|+|||+...+. .+.|..+.+++.++|
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~----G~~V~liE~~~~~~-----------~g~g~~~~p~~~~~l 70 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP----KLNITLIESPDVAT-----------IGVGEGTWPSMRSTL 70 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC----SCEEEEEECSSCCC-----------CCSCEECCTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC----CCeEEEEeCCCCCC-----------cceeeechHhHHHHH
Confidence 45899999999999999999999 6 89999999976542 222788999999999
Q ss_pred HHcCCchh--hhhhhccccceEEEEeCCC-------cc------------ceeeec------------------------
Q 010200 122 KEIGAWQY--VQQHRHAYFDKMQVWDYTG-------LG------------YTKYNA------------------------ 156 (515)
Q Consensus 122 ~~lgl~~~--~~~~~~~~~~~~~~~~~~~-------~~------------~~~~~~------------------------ 156 (515)
+.+|+.+. +.+........+.+.+... .. ...+..
T Consensus 71 ~~lGi~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~ 150 (526)
T 2pyx_A 71 SKIGIDENDFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQL 150 (526)
T ss_dssp HHHTCCHHHHHHHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHT
T ss_pred HHcCCCHHHHHHHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhh
Confidence 99999886 5544332233333332111 00 000000
Q ss_pred ---------ccC-CCCcceEEechHHHHHHHHHHHhc-CCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCee
Q 010200 157 ---------RDV-NKEILGCVVENKVLHSSLLSCMQN-TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA 225 (515)
Q Consensus 157 ---------~~~-~~~~~~~~i~r~~l~~~L~~~~~~-~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (515)
... .....++.++|..|...|.+.+++ .| ++++++ +|++++. + +++..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~G-v~i~~~-~v~~i~~-----------~-------~~g~~~ 210 (526)
T 2pyx_A 151 GLAPKSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLG-VTHIRD-HVSQIIN-----------N-------QHGDIE 210 (526)
T ss_dssp TBCSSCTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSC-CEEEEC-CEEEEEE-----------C-------TTSCEE
T ss_pred ccchhhhhccccCCCCCeeEEEcHHHHHHHHHHHHHhcCC-CEEEEe-EEEEEEe-----------c-------CCCcEE
Confidence 000 112346889999999999999998 77 999999 6999976 0 112345
Q ss_pred EEEcCCCcEEEeeEEEEecCCCchh-hhhcCCcccccc---CCceEEEEEEEeec----CCceEEEEecCCCcEEEEecC
Q 010200 226 KLDLSDGTSLYAKLVVGADGGKSRV-RELAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIG 297 (515)
Q Consensus 226 ~v~~~~g~~~~ad~vV~AdG~~S~v-r~~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~ 297 (515)
.|.+.+|.++.+|+||+|||.+|.+ ++.++....... ....++...+.... ........+.+.|++|++|+.
T Consensus 211 ~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~ 290 (526)
T 2pyx_A 211 KLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLP 290 (526)
T ss_dssp EEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECS
T ss_pred EEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCC
Confidence 6777887789999999999999999 666765543221 12234444444331 112223345678899999998
Q ss_pred CCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEeccc
Q 010200 298 DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 377 (515)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 377 (515)
++.. +.+...... .+.+...+.+.+.+. .+. +.+.. ..
T Consensus 291 ~~~~-~~~v~~~~~------~~~~~~~~~l~~~l~-~~~-----------~~l~~-----------------------~~ 328 (526)
T 2pyx_A 291 TRKG-VGYVYSSSH------TNDIDAQKTLFNYLG-VDG-----------AAADK-----------------------LE 328 (526)
T ss_dssp SEEE-EEEEECTTT------CCHHHHHHHHHHHHT-CCH-----------HHHHH-----------------------CC
T ss_pred CceE-EEEEecCCC------CChHHHHHHHHHHHH-hcC-----------ccccc-----------------------CC
Confidence 7533 334333221 233445555555443 110 00100 00
Q ss_pred eeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHH
Q 010200 378 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 457 (515)
Q Consensus 378 ~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~ 457 (515)
...+++.....++|..+||+|||||||.++|+.|||+|+|++||..|+++|..... ....+++.|+++|+++...
T Consensus 329 ~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~~-----~~~~~l~~Y~~~~~~~~~~ 403 (526)
T 2pyx_A 329 PRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNRM-----VMDTISARVNERYQQHWQQ 403 (526)
T ss_dssp CEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCHH-----HHHHHHHHHHHHHHHHHHH
T ss_pred ceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcCC-----cCHHHHHHHHHHHHHHHHH
Confidence 11233333345667789999999999999999999999999999999998863111 1267899999999999998
Q ss_pred HHHHHHHHHHhhcC
Q 010200 458 MMAVLDGFQKAYSV 471 (515)
Q Consensus 458 ~~~~s~~~~~~~~~ 471 (515)
+.++....+.+...
T Consensus 404 ~~~~~~~~y~~~~r 417 (526)
T 2pyx_A 404 IIDFLKLHYVISQR 417 (526)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhcCC
Confidence 88877776665443
No 25
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=6.1e-31 Score=280.08 Aligned_cols=346 Identities=11% Similarity=0.089 Sum_probs=213.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcC----CCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCch
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASM----PLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQ 128 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~----~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~ 128 (515)
.+++||+||||||+||++|+.|++. + +|++|+||||.+.++.. ...+..+.+++++.| ++.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~--~G~~V~vlEk~~~~g~~---------~~~g~~l~~~~l~~l--l~~-- 97 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHE--KDLRVCLVEKAAHIGAH---------TLSGACLDPRAFEEL--FPD-- 97 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTT--CCCCEEEECSSSSTTTT---------CCCCCEECTHHHHHH--CTT--
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccC--CCCcEEEEeCCCCCCCc---------cccccccCHHHHHHH--HHH--
Confidence 3468999999999999999999983 1 18999999999876422 123456788777655 322
Q ss_pred hhhhhhcccc------ceEEEEeCCCccceeeec-cc-CCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEe
Q 010200 129 YVQQHRHAYF------DKMQVWDYTGLGYTKYNA-RD-VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMAL 200 (515)
Q Consensus 129 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~ 200 (515)
+.+... ++ ..+.+..... ...++. .. .......+.++|..|.++|.+.+++.| ++|+++++|+++..
T Consensus 98 -~~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~v~~l~~ 172 (584)
T 2gmh_A 98 -WKEKGA-PLNTPVTEDRFGILTEKY--RIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALG-VEVYPGYAAAEILF 172 (584)
T ss_dssp -HHHHTC-CCCEECCEEEEEEECSSC--EEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEE
T ss_pred -HHhcCC-ceeeeechhheeeeccCC--CccccccCccccccCCCEEEeHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE
Confidence 222222 11 1233333221 122221 01 011223578999999999999999987 99999999999986
Q ss_pred CCCCCCcccCCCCCcccccccCCeeEEEcC---------------CCcEEEeeEEEEecCCCchhhhhc----CCccccc
Q 010200 201 LPSSSSISVDSTPSATTLFTKGHLAKLDLS---------------DGTSLYAKLVVGADGGKSRVRELA----GFKTTGW 261 (515)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---------------~g~~~~ad~vV~AdG~~S~vr~~l----~~~~~~~ 261 (515)
++ ++..+.|.+. +|.+++||+||+|||.+|.+|+.+ ++....
T Consensus 173 ~~------------------~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~- 233 (584)
T 2gmh_A 173 HE------------------DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANC- 233 (584)
T ss_dssp CT------------------TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTS-
T ss_pred cC------------------CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCC-
Confidence 11 1112224443 246899999999999999999987 443211
Q ss_pred cCCce--EEEEEEEeec--CC-ceEEEEe------cCCCcEEEEecC--CCceEEEEEcCCCChHHhhcCCHHHHHHHHH
Q 010200 262 SYSQN--AIICTVEHNK--EN-YCAWQRF------LPAGPIALLPIG--DNFSNIVWTMNPKDASDCKSMNEDDFVKILN 328 (515)
Q Consensus 262 ~~~~~--~~~~~~~~~~--~~-~~~~~~~------~~~g~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (515)
..... .+...+..+. .. ......+ ...+..+++|.. ++..++.|....+.... ..++. +.+.
T Consensus 234 ~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~---~~l~ 308 (584)
T 2gmh_A 234 EPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSPF---REFQ 308 (584)
T ss_dssp CCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCHH---HHHH
T ss_pred CchhHHhhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccc--cCChH---HHHH
Confidence 11111 2222222222 11 2222222 112346778887 78888888765433211 11221 1222
Q ss_pred HhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEeccceeeeccccccccccccCcEEEEcccccccCC
Q 010200 329 HALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHP 408 (515)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P 408 (515)
+.+. ++ .+..++... ++.. ...+..++......++|..++++|||||||+++|
T Consensus 309 ~~~~-----~p---------~i~~~l~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P 361 (584)
T 2gmh_A 309 RWKH-----HP---------SIKPTLEGG------------KRIA-YGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNV 361 (584)
T ss_dssp HHTT-----ST---------TTHHHHTTC------------EEEE-EEEEEEECCGGGGCCCCEETTEEECTTTTCCCBT
T ss_pred HHHh-----Ch---------HHHHHhCCC------------eEEE-ecceEccCCCcccCCccccCCEEEEcccccccCc
Confidence 2111 00 111111100 0111 0111123444445678889999999999999999
Q ss_pred ccccchhhcHHHHHHHHHHHHHhHhcCC-CcchHHH---HHHHHHHhhHH-HHHHHHHHHHHHHhhcC
Q 010200 409 LAGQGVNLGFGDASTLSRIIAEGIAVGA-DIGEASL---LKKYEAERKPA-NIVMMAVLDGFQKAYSV 471 (515)
Q Consensus 409 ~~G~G~n~al~da~~La~~l~~~~~~~~-~~~~~~a---l~~Y~~~r~~~-~~~~~~~s~~~~~~~~~ 471 (515)
+.|||+|+||+||..||+.|..+++.+. +. ..+ |+.|+++|+++ +.+.+..++.+..+|+.
T Consensus 362 ~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~--~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~ 427 (584)
T 2gmh_A 362 PKIKGTHTAMKSGTLAAESIFNQLTSENLQS--KTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHG 427 (584)
T ss_dssp TTTBCHHHHHHHHHHHHHHHHHHHTCCCCCC--SSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGS
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHcCCcch--hhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHH
Confidence 9999999999999999999999876442 12 343 89999999988 68888888888777754
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.98 E-value=6.6e-30 Score=270.70 Aligned_cols=330 Identities=13% Similarity=0.124 Sum_probs=216.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHH-HHHHcCCchh
Q 010200 54 DQYDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY 129 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~lgl~~~ 129 (515)
..+||+|||||++|+++|+.|++ . |++|+|||+...+. .+.+..+.+.... +++.+|+.+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~----G~~V~liE~~~~~~-----------~~~g~~~~~~~~~~~l~~lG~~~~ 68 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ----QANITLIESAAIPR-----------IGVGEATIPSLQKVFFDFLGIPER 68 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS----SCEEEEEECSSSCC-----------CCSCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC----CCEEEEECCCCCCC-----------cCCCcccchhHHHHHHHHhCCCHH
Confidence 45899999999999999999999 7 89999999976441 1226778889999 9999998765
Q ss_pred --hhhhhccccceEEEEeCC---------------Ccc----ceeee-----cc----cCC-------------------
Q 010200 130 --VQQHRHAYFDKMQVWDYT---------------GLG----YTKYN-----AR----DVN------------------- 160 (515)
Q Consensus 130 --~~~~~~~~~~~~~~~~~~---------------~~~----~~~~~-----~~----~~~------------------- 160 (515)
+..........+.+.... +.. ...+. .. ...
T Consensus 69 ~~~~~~~~~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 148 (538)
T 2aqj_A 69 EWMPQVNGAFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPC 148 (538)
T ss_dssp HHGGGGTCEEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSB
T ss_pred HHHHhcCchhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchH
Confidence 333221111122221111 100 00000 00 000
Q ss_pred ------CCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcE
Q 010200 161 ------KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTS 234 (515)
Q Consensus 161 ------~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~ 234 (515)
....++.+++..+...|.+.+.+.| ++++++ +|++++. + +++..+.|.+.+|++
T Consensus 149 ~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~-----------~-------~~g~~~~v~~~~g~~ 208 (538)
T 2aqj_A 149 LSDGTRQMSHAWHFDAHLVADFLKRWAVERG-VNRVVD-EVVDVRL-----------N-------NRGYISNLLTKEGRT 208 (538)
T ss_dssp CTTCCBCSCCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEE-----------C-------TTSCEEEEEETTSCE
T ss_pred hhcCCcCCCccEEEeHHHHHHHHHHHHHHCC-CEEEEe-eEeEEEE-----------c-------CCCcEEEEEECCCcE
Confidence 1234688999999999999999887 999999 8999976 0 122346788888888
Q ss_pred EEeeEEEEecCCCchhhhh-cCCcccccc---CCceEEEEEEEeec----CCceEEEEecCCCcEEEEecCCCceEEEEE
Q 010200 235 LYAKLVVGADGGKSRVREL-AGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWT 306 (515)
Q Consensus 235 ~~ad~vV~AdG~~S~vr~~-l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~ 306 (515)
+.+|+||+|||.+|.+|+. ++.....+. ....++...+.... ........+.+.|++|++|+.++ ..+.+.
T Consensus 209 i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v 287 (538)
T 2aqj_A 209 LEADLFIDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYV 287 (538)
T ss_dssp ECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEE
T ss_pred EEeCEEEECCCCchhhHHHHhCCCccccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEE
Confidence 9999999999999999654 455432222 12233433443321 11222334568889999999874 333443
Q ss_pred cCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEeccceeeeccccc
Q 010200 307 MNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLK 386 (515)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~ 386 (515)
.... ..+++...+.+.+.+. . +. . . ....+++...
T Consensus 288 ~~~~------~~~~~~~~~~l~~~~~-~--~~-~--------------------------~---------~~~~~~~~~~ 322 (538)
T 2aqj_A 288 FSSH------FTSRDQATADFLKLWG-L--SD-N--------------------------Q---------PLNQIKFRVG 322 (538)
T ss_dssp ECTT------TSCHHHHHHHHHHHHT-C--CT-T--------------------------C---------CCEEEECCCE
T ss_pred EcCC------CCChHHHHHHHHHHhc-C--CC-C--------------------------C---------CceEEeeccc
Confidence 3221 1245566666766554 1 00 0 0 0001233333
Q ss_pred cccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 010200 387 HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQ 466 (515)
Q Consensus 387 ~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~ 466 (515)
..++|..++|+|||||||+++|+.|||+|+|++||..|+++|.. +.. ...+|+.|++.|+++...+.......+
T Consensus 323 ~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y 396 (538)
T 2aqj_A 323 RNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD----TSF--DPRLSDAFNAEIVHMFDDCRDFVQAHY 396 (538)
T ss_dssp EESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 35567789999999999999999999999999999999988763 222 267899999999999888887766666
Q ss_pred Hhhc
Q 010200 467 KAYS 470 (515)
Q Consensus 467 ~~~~ 470 (515)
..-.
T Consensus 397 ~~~~ 400 (538)
T 2aqj_A 397 FTTS 400 (538)
T ss_dssp HTCC
T ss_pred cccC
Confidence 5433
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.98 E-value=1.5e-29 Score=268.34 Aligned_cols=360 Identities=12% Similarity=0.127 Sum_probs=230.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHH-HHHHcCCchh
Q 010200 54 DQYDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY 129 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~lgl~~~ 129 (515)
..+||||||||++|+++|+.|++ . |++|+|||+.+.+. .+.|..+.+.+.+ +++.+|+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~----G~~V~liE~~~~~~-----------~~~g~~~~p~~~~~~l~~lGi~~~ 88 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG----TADITLLQAPDIPT-----------LGVGEATIPNLQTAFFDFLGIPED 88 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT----SSEEEEEECCCCCC-----------CCCCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC----CCcEEEEeCCCCCc-----------cceeeeechhHHHHHHHHhCCChH
Confidence 46899999999999999999999 6 89999999976541 2236788899999 9999999876
Q ss_pred --hhhhhccccceEEEEeCCCc-------------c-ce--eee-----------------------c------------
Q 010200 130 --VQQHRHAYFDKMQVWDYTGL-------------G-YT--KYN-----------------------A------------ 156 (515)
Q Consensus 130 --~~~~~~~~~~~~~~~~~~~~-------------~-~~--~~~-----------------------~------------ 156 (515)
+..........+.+...... . .. .+. .
T Consensus 89 ~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 168 (550)
T 2e4g_A 89 EWMRECNASYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPV 168 (550)
T ss_dssp HHHHHTTCEEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHH
T ss_pred HHHHhcCCeEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhh
Confidence 44332211122222211110 0 00 000 0
Q ss_pred -ccC-------C---CCcceEEechHHHHHHHHHHHhcC-CCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe
Q 010200 157 -RDV-------N---KEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 224 (515)
Q Consensus 157 -~~~-------~---~~~~~~~i~r~~l~~~L~~~~~~~-g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (515)
... . ....++.+++..+...|.+.+++. | ++++++ +|++++.. +++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~G-v~i~~~-~V~~i~~~------------------~~g~~ 228 (550)
T 2e4g_A 169 ILDANRSPRRLDGSKVTNYAWHFDAHLVADFLRRFATEKLG-VRHVED-RVEHVQRD------------------ANGNI 228 (550)
T ss_dssp HHHTTBCSBCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSC-CEEEEC-CEEEEEEC------------------TTSCE
T ss_pred HHHhhhhhHhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCC-cEEEEC-eEeEEEEc------------------CCCCE
Confidence 000 0 123467899999999999999988 7 999999 99999760 12234
Q ss_pred eEEEcCCCcEEEeeEEEEecCCCchh-hhhcCCcccccc---CCceEEEEEEEeec----CCceEEEEecCCCcEEEEec
Q 010200 225 AKLDLSDGTSLYAKLVVGADGGKSRV-RELAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPI 296 (515)
Q Consensus 225 ~~v~~~~g~~~~ad~vV~AdG~~S~v-r~~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~ 296 (515)
+.|.+.+|+++.||+||+|||.+|.+ ++.++.....+. .....+...+.... ..........+.+++|++|+
T Consensus 229 ~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl 308 (550)
T 2e4g_A 229 ESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPM 308 (550)
T ss_dssp EEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEC
T ss_pred EEEEECCCCEEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccC
Confidence 67888888889999999999999999 555665432221 12223333333221 11222333457889999998
Q ss_pred CCCceEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEecc
Q 010200 297 GDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLAS 376 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 376 (515)
++. ..+.+..... ..+.++..+.+.+.+. . .+. +.. ..
T Consensus 309 ~~~-~~~g~v~~~~------~~~~~~~~~~l~~~~~-~---~p~---------l~~----------------~~------ 346 (550)
T 2e4g_A 309 LGR-FGTGYVYSSR------FATEDEAVREFCEMWH-L---DPE---------TQP----------------LN------ 346 (550)
T ss_dssp SSE-EEEEEEECTT------TSCHHHHHHHHHHHTT-C---CTT---------TSC----------------CE------
T ss_pred CCc-cceEEEEecC------CCChHHHHHHHHHhhC-c---Ccc---------cCC----------------Cc------
Confidence 773 3333333221 1245566666666543 1 100 000 00
Q ss_pred ceeeeccccccccccccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHH
Q 010200 377 ERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANI 456 (515)
Q Consensus 377 ~~~~~p~~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~ 456 (515)
.+++.....+++..+++++||||||+++|+.|||+|+|++||..|+++|.. +.. ...+++.|++.|+++..
T Consensus 347 ---~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~ 417 (550)
T 2e4g_A 347 ---RIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD----KSL--NPVLTARFNREIETMFD 417 (550)
T ss_dssp ---EEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHH
T ss_pred ---eEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc----cCC--CHHHHHHHHHHHHHHHH
Confidence 112222234556678999999999999999999999999999999988763 212 37899999999999999
Q ss_pred HHHHHHHHHHHhhcCC-CChHHHHHHHHHHhcccChhHHHHHHHHhhcC
Q 010200 457 VMMAVLDGFQKAYSVD-FGPLNILRAAAFHGAQYISPLKRNIISYASGE 504 (515)
Q Consensus 457 ~~~~~s~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~ 504 (515)
.+..+....+.+-... .+++...+ .+..-+.+++.+.....+.
T Consensus 418 ~i~~~~~~~y~~~~r~~~~fw~~~~-----~~~~p~~l~~~~~~~~~~~ 461 (550)
T 2e4g_A 418 DTRDFIQAHFYFSPRTDTPFWRANK-----ELRLADGMQEKIDMYRAGM 461 (550)
T ss_dssp HHHHHHHHHHHTCCCCSSHHHHHHT-----TSCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCCChHHHHHhh-----cCCCCHHHHHHHHHHHhcC
Confidence 9999888887765443 33433322 1222234555555444443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.96 E-value=1.5e-28 Score=252.88 Aligned_cols=369 Identities=12% Similarity=0.074 Sum_probs=213.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCC--chhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGA--WQYVQ 131 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl--~~~~~ 131 (515)
+.+||+||||||+||++|+.|++. |++|+||||.+.+.... + ....+..+...++..++.+|+ |...
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~----G~~V~viE~~~~~~~~~-----g-~~~~~~~~~~~~~~~~~~lg~~~~~~~- 89 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH----DVDVTVYTDRKPDEYSG-----L-RLLNTVAHNAVTVQREVALDVNEWPSE- 89 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT----TCEEEEEESCCGGGSTT-----S-CCCCCCCBCHHHHHHHHHTTCCCSCHH-
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC----CCeEEEEcCCChHhhcc-----c-ccccchhccchhhhhhhhcChhhhhhh-
Confidence 457999999999999999999996 99999999987432111 0 111123456677778888865 3221
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCC-eeEEEEeCCCCCCcccC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPS-RLTSMALLPSSSSISVD 210 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~-~v~~i~~~~~~~~~~~~ 210 (515)
...+..+.++..... ...+... ....++.+++..+...|.+.+.+.| ++++++. .+.+++.
T Consensus 90 ---~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~v~~~~l~~~L~~~~~~~G-v~v~~~~v~~~~l~~---------- 151 (430)
T 3ihm_A 90 ---EFGYFGHYYYVGGPQ-PMRFYGD---LKAPSRAVDYRLYQPMLMRALEARG-GKFCYDAVSAEDLEG---------- 151 (430)
T ss_dssp ---HHCEEEEEEEECSSS-CEEEEEE---EEEEEBEECHHHHHHHHHHHHHHTT-CEEEECCCCGGGHHH----------
T ss_pred ---cccccceeEEECCCC-ccccchh---cCCcceeecHHHHHHHHHHHHHHcC-CEEEEEecchhhhhh----------
Confidence 124455555544332 2222211 1234577899999999999999988 8887632 1122211
Q ss_pred CCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcC-CccccccCCceEEE-EEEEe---ecCCceEEEEe
Q 010200 211 STPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAG-FKTTGWSYSQNAII-CTVEH---NKENYCAWQRF 285 (515)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~-~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~ 285 (515)
. ...+|+||+|||.+|.+|.... .......+...... ..+.. +......+..+
T Consensus 152 --------------~--------~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~ 209 (430)
T 3ihm_A 152 --------------L--------SEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFS 209 (430)
T ss_dssp --------------H--------HTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEE
T ss_pred --------------h--------cccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeec
Confidence 0 1248999999999999875431 11122222322222 22211 11123455556
Q ss_pred cCCCcEEEEecC--CCceE--EEEEcCCCChHHhhcC----CHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCc
Q 010200 286 LPAGPIALLPIG--DNFSN--IVWTMNPKDASDCKSM----NEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDA 357 (515)
Q Consensus 286 ~~~g~~~~~p~~--~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (515)
...|.++++|.. ++..+ ++|..+.......... +++++++.+.+.|. .|.+. +...+...
T Consensus 210 ~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~ 277 (430)
T 3ihm_A 210 PGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLG-KHHPS-----------VAERIDPA 277 (430)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHH-HHCHH-----------HHTTBCTT
T ss_pred CCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHH-HhCcc-----------HHHHHhhc
Confidence 666888888863 23333 3444443333333333 67777777666554 22211 11111100
Q ss_pred cccccccccCCcceEEeccceeeeccccccccccccCcEEE-EcccccccCCccccchhhcHHHHHHHHHHHHHhHhcCC
Q 010200 358 TLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVL-IGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGA 436 (515)
Q Consensus 358 ~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~l-vGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~~~~ 436 (515)
.+.. ...+..+.. ...+|+...+..+|..++++| +|||||+++|+.|||+|+||+||..|+++|... +
T Consensus 278 ~~~~---~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~- 346 (430)
T 3ihm_A 278 EFDL---ANSSLDILQ----GGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---S- 346 (430)
T ss_dssp TCEE---SSSTTSEEE----ECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---S-
T ss_pred hhcc---ccCccceee----cceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---C-
Confidence 0000 000000000 012454455667888899998 999999999999999999999999999999984 2
Q ss_pred CcchHHHHHHHHHHhh-HHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHhcccChhHHHHHHHHhh
Q 010200 437 DIGEASLLKKYEAERK-PANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYAS 502 (515)
Q Consensus 437 ~~~~~~al~~Y~~~r~-~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 502 (515)
+. ..+|..|+.+|+ +++....+.++.+..-...+... + ..++..+...|.+.+.+...++
T Consensus 347 ~~--~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~ 407 (430)
T 3ihm_A 347 VY--DLRFSEHLERRRQDRVLCATRWTNFTLSALSALPPE---F-LAFLQILSQSREMADEFTDNFN 407 (430)
T ss_dssp CC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---H-HHHHHHHHHCHHHHHHHHHGGG
T ss_pred CH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHH---H-HHHHHHHhhCHHHHHHHHHhCC
Confidence 33 789999999988 66777766666654321112211 1 2233334445666666665544
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.90 E-value=1.4e-22 Score=211.77 Aligned_cols=314 Identities=18% Similarity=0.171 Sum_probs=183.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
...+||+||||||+||++|+.|++. |++|+|||+.+.++ ..+...+.+.+.+.|..+|+++....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~----G~~V~liEk~~~~g-----------~~~~~~~~~~~~~~l~~~g~~~~~~~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL----GARVVLVEKRIKFS-----------RHNVLHLWPFTIHDLRALGAKKFYGR 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCSSCC-----------CCCEEECCHHHHHHHHTTTHHHHCTT
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC----CCeEEEEEeccccC-----------CCCcccCChhHHHHHHHcCCcccccc
Confidence 4568999999999999999999996 99999999998662 12456788899999988887543110
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
+. . .. ...+++..+...|.+.+++.| ++|+++++|++++. ++
T Consensus 155 -----~~----------------~----~~--~~~~~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~---------~~- 196 (497)
T 2bry_A 155 -----FC----------------T----GT--LDHISIRQLQLLLLKVALLLG-VEIHWGVKFTGLQP---------PP- 196 (497)
T ss_dssp -----TT----------------C----TT--CCEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEC---------CC-
T ss_pred -----cc----------------c----cc--cccCCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE---------ec-
Confidence 00 0 00 124678899999999999887 99999999999975 10
Q ss_pred CCcccccccCCeeEEEc--C-CC--cEEEeeEEEEecCCCchhhhhcCCcccccc-CCceEEEEEE-Eeec----C-Cce
Q 010200 213 PSATTLFTKGHLAKLDL--S-DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWS-YSQNAIICTV-EHNK----E-NYC 280 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~--~-~g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~-~~~~~~~~~~-~~~~----~-~~~ 280 (515)
. ++..+.|.+ . +| .++.+|+||+|||.+|.+|+..+....+.. +........+ .... + ...
T Consensus 197 ~-------~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~G~ 269 (497)
T 2bry_A 197 R-------KGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVPEISGV 269 (497)
T ss_dssp S-------TTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCCBCC-
T ss_pred C-------CCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchhhcCce
Confidence 0 123455655 4 56 479999999999999999987755443332 1222111111 0000 0 011
Q ss_pred EEE---EecC-----CC-cE-EEEecCCCceEEEEEc-------------CCCChHHhh---cCCHHHHHHHH--HHhhc
Q 010200 281 AWQ---RFLP-----AG-PI-ALLPIGDNFSNIVWTM-------------NPKDASDCK---SMNEDDFVKIL--NHALD 332 (515)
Q Consensus 281 ~~~---~~~~-----~g-~~-~~~p~~~~~~~~~~~~-------------~~~~~~~~~---~~~~~~~~~~~--~~~~~ 332 (515)
.+. .+.+ .| .. .++|.+++...++... ......... ..+...+.... ...|.
T Consensus 270 ~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 349 (497)
T 2bry_A 270 ARIYNQKFFQSLLKATGIDLENIVYYKDETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFA 349 (497)
T ss_dssp ---CCSSHHHHHHHHHCCCEEEEEEEESSEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHH
T ss_pred EEecChhhhHhHHhhcCCCcccccccCCCeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccccc
Confidence 110 0000 11 11 1344444433222211 111111111 11223332111 11111
Q ss_pred CCCCCCCCCCCCCcccchh---ccccCccccccccccCCcceEEe--ccceeeeccccccccccccCc-EEEEccccc-c
Q 010200 333 YGYGPHPKSISSGSVDMFS---WFRGDATLSAKECFEVPPRVVKL--ASERMVFPLSLKHANNYVSKR-VVLIGDAAH-T 405 (515)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~p~~~~~~~~~~~~~-v~lvGDAAh-~ 405 (515)
.... .+.+. ..++ +....+ ......|++..+.+.+|..|+ ++|+||||| .
T Consensus 350 ~~~~----------~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~r~a~~~~~gRr~~l~Gda~~~~ 406 (497)
T 2bry_A 350 THGK----------LGKLEFAQDARG-------------RPDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEP 406 (497)
T ss_dssp TTTT----------TCSCCBCBCTTS-------------SBCEEEEECSEEEEESCSEEEEEETTEEEEEEECGGGTBCC
T ss_pred hhhc----------cccchhhhhccC-------------CCCCceeeeEEEEecchhhHHHHhcCCcccceEeccccccC
Confidence 0000 00011 1111 101111 223445888888899999998 999999999 4
Q ss_pred cCCccccchhhcHHHHHHHHHHHHHhHhcCCCcchHHHHHHHHHHhhHHHHH
Q 010200 406 VHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 457 (515)
Q Consensus 406 ~~P~~G~G~n~al~da~~La~~l~~~~~~~~~~~~~~al~~Y~~~r~~~~~~ 457 (515)
+.| .|||+|++|+||..|++.|...++.. . ..+.| .+|++.++.
T Consensus 407 ~~p-~g~G~n~g~~~a~~l~~~l~~~~~g~-~--~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 407 FWP-LGTGVARGFLAAFDAAWMVKRWAEGA-G--PLEVL----AERESLYQL 450 (497)
T ss_dssp CGG-GCCHHHHHHHHHHHHHHHHHHHHTTC-C--HHHHH----HHHHHHHTT
T ss_pred cCc-cccchhhHHHHHHHHHHHHHHHhCCC-C--ccchh----hhHHHHhhh
Confidence 555 99999999999999999999985432 2 24455 566654443
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.86 E-value=2.3e-20 Score=185.37 Aligned_cols=307 Identities=14% Similarity=0.115 Sum_probs=167.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC--CCCCCCcEEEe---CHhHHHHHHHcCCchh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKK--EDPPDPRVSTV---TPATISFFKEIGAWQY 129 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~--~~~~~~~~~~l---~~~~~~~l~~lgl~~~ 129 (515)
++||+|||||++|+++|+.|++. |++|+||||.+.++....... ..........+ .+...+.++.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~----G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 74 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA----GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQA--- 74 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHH---
T ss_pred CceEEEECCcHHHHHHHHHHHHC----CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHh---
Confidence 47999999999999999999996 999999999986632211000 00000000011 1233333333211
Q ss_pred hhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCccc
Q 010200 130 VQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISV 209 (515)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~ 209 (515)
. .........+..... .. +.... .....+ ..+..+ ..|.+.+.+ + ++|+++++|++++.
T Consensus 75 ~-~~~~~~~~~~~~~~~-~~----~~~~~--~~~~~~-~~~~~~-~~l~~~l~~-g-~~i~~~~~v~~i~~--------- 133 (336)
T 1yvv_A 75 Q-GHVAEWTPLLYNFHA-GR----LSPSP--DEQVRW-VGKPGM-SAITRAMRG-D-MPVSFSCRITEVFR--------- 133 (336)
T ss_dssp H-TSEEEECCCEEEESS-SB----CCCCC--TTSCEE-EESSCT-HHHHHHHHT-T-CCEECSCCEEEEEE---------
T ss_pred C-CCeeeccccceeccC-cc----cccCC--CCCccE-EcCccH-HHHHHHHHc-c-CcEEecCEEEEEEE---------
Confidence 0 000000111111111 10 00000 111111 111112 223333333 5 89999999999987
Q ss_pred CCCCCcccccccCCeeEEEcCCCcEE-EeeEEEEecCCCchhhhhcCCc-----cccccCCceEEEEEEEeecCC-ceEE
Q 010200 210 DSTPSATTLFTKGHLAKLDLSDGTSL-YAKLVVGADGGKSRVRELAGFK-----TTGWSYSQNAIICTVEHNKEN-YCAW 282 (515)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~~~g~~~-~ad~vV~AdG~~S~vr~~l~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~ 282 (515)
.++.++|++.+|+.. .+|+||+|+|.+|.+|..-... .....|. ..+...+..+.+. ....
T Consensus 134 -----------~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 201 (336)
T 1yvv_A 134 -----------GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMD-PTWAVALAFETPLQTPMQ 201 (336)
T ss_dssp -----------CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEE-EEEEEEEEESSCCSCCCC
T ss_pred -----------eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCcc-ceeEEEEEecCCCCCCCC
Confidence 445688989898866 4999999999999988653221 1223333 2333334443332 2222
Q ss_pred EEecCCCcEEEE------ecCCCc-eEEEEEcCCCChHHhhcCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhcccc
Q 010200 283 QRFLPAGPIALL------PIGDNF-SNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRG 355 (515)
Q Consensus 283 ~~~~~~g~~~~~------p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (515)
..+.+++++.++ |...+. ..++|....+........+++++.+.+.+.+..-++....
T Consensus 202 ~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~--------------- 266 (336)
T 1yvv_A 202 GCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMP--------------- 266 (336)
T ss_dssp EEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCC---------------
T ss_pred eEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCC---------------
Confidence 334456665554 444443 5778887665555566778889998888876532221100
Q ss_pred CccccccccccCCcceEEeccceeeecccccccccc--ccCcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHh
Q 010200 356 DATLSAKECFEVPPRVVKLASERMVFPLSLKHANNY--VSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 433 (515)
Q Consensus 356 ~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~--~~~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~ 433 (515)
.+...........+|.+....... ..++++|+|||+|. .|++.|+.++..||+.|.+.+.
T Consensus 267 ------------~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 267 ------------APVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp ------------CCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------CCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 001111111122233332222122 24899999999964 4999999999999999998765
Q ss_pred c
Q 010200 434 V 434 (515)
Q Consensus 434 ~ 434 (515)
.
T Consensus 329 ~ 329 (336)
T 1yvv_A 329 L 329 (336)
T ss_dssp C
T ss_pred h
Confidence 3
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.65 E-value=1.3e-15 Score=153.82 Aligned_cols=193 Identities=13% Similarity=0.071 Sum_probs=111.1
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecC
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG 245 (515)
..++...+...|.+.+++.| ++++++++|++++. +++.+.|.+.+| ++.+|.||.|+|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G 216 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLG-AEIFEHTPVLHVER--------------------DGEALFIKTPSG-DVWANHVVVASG 216 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTT-CEEETTCCCCEEEC--------------------SSSSEEEEETTE-EEEEEEEEECCG
T ss_pred eEEcHHHHHHHHHHHHHHCC-CEEEcCCcEEEEEE--------------------ECCEEEEEcCCc-eEEcCEEEECCC
Confidence 34667899999999999988 99999999999976 234467777777 799999999999
Q ss_pred CCch-hhhhcCCccccccCCceEEEEEEEeecCC-ceEEEEecCCCcEEEEecCCCceEEEEEcCCCChHHhhcCCH---
Q 010200 246 GKSR-VRELAGFKTTGWSYSQNAIICTVEHNKEN-YCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNE--- 320 (515)
Q Consensus 246 ~~S~-vr~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 320 (515)
.+|. +.+.++...... ........+...... ... .+ ....+++|..++...+........ .....+.
T Consensus 217 ~~s~~l~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~--~~--~~~~~~~p~~~g~~~vG~~~~~~~--~~~~~~~~~~ 288 (382)
T 1ryi_A 217 VWSGMFFKQLGLNNAFL--PVKGECLSVWNDDIPLTKT--LY--HDHCYIVPRKSGRLVVGATMKPGD--WSETPDLGGL 288 (382)
T ss_dssp GGTHHHHHHTTCCCCCE--EEEEEEEEEECCSSCCCSE--EE--ETTEEEEECTTSEEEEECCCEETC--CCCSCCHHHH
T ss_pred hhHHHHHHhcCCCCcee--ccceEEEEECCCCCCccce--EE--cCCEEEEEcCCCeEEEeecccccC--CCCCCCHHHH
Confidence 9987 777765432211 112222223222111 111 12 236788888776544433211111 0011222
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCcccchhccccCccccccccccCCcceEEeccceeeeccccccccccccCcEEEEc
Q 010200 321 DDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIG 400 (515)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~lvG 400 (515)
+.+.+.+.+.++ . +.. ..+...+.. ...+..++..++|
T Consensus 289 ~~l~~~~~~~~p-~---------------l~~-------------------~~~~~~w~g-------~~~~t~d~~p~ig 326 (382)
T 1ryi_A 289 ESVMKKAKTMLP-A---------------IQN-------------------MKVDRFWAG-------LRPGTKDGKPYIG 326 (382)
T ss_dssp HHHHHHHHHHCG-G---------------GGG-------------------SEEEEEEEE-------EEEECSSSCCEEE
T ss_pred HHHHHHHHHhCC-C---------------cCC-------------------CceeeEEEE-------ecccCCCCCcEec
Confidence 233334444332 0 000 000000000 0112234566677
Q ss_pred ccc-----cccCCccccchhhcHHHHHHHHHHHHH
Q 010200 401 DAA-----HTVHPLAGQGVNLGFGDASTLSRIIAE 430 (515)
Q Consensus 401 DAA-----h~~~P~~G~G~n~al~da~~La~~l~~ 430 (515)
++. ....++.|.|+.+|...|..|++.|..
T Consensus 327 ~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 327 RHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp EETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred cCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 653 446778999999999999999988865
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.61 E-value=4.9e-14 Score=143.33 Aligned_cols=117 Identities=12% Similarity=0.055 Sum_probs=76.8
Q ss_pred EechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCC
Q 010200 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 246 (515)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~ 246 (515)
.++...+...|.+.+++.| ++++++++|++++. +.+..+.|.+.+| ++.+|.||.|+|.
T Consensus 170 ~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g-~~~a~~vV~a~G~ 228 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMG-VDIIQNCEVTGFIK-------------------DGEKVTGVKTTRG-TIHAGKVALAGAG 228 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------SSSBEEEEEETTC-CEEEEEEEECCGG
T ss_pred cCCHHHHHHHHHHHHHHCC-CEEEcCCeEEEEEE-------------------eCCEEEEEEeCCc-eEECCEEEECCch
Confidence 4566789999999999988 99999999999976 1223456777777 6999999999999
Q ss_pred Cc-hhhhhcCCccccccCCceEEEEEEEeecCCceEEEEecCCCcEEEEecCCCceEEEEEc
Q 010200 247 KS-RVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNFSNIVWTM 307 (515)
Q Consensus 247 ~S-~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~ 307 (515)
+| .+++.++...+...+....+... +........+ +.....+++.|..++...+....
T Consensus 229 ~s~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~y~~p~~~g~~~ig~~~ 287 (405)
T 2gag_B 229 HSSVLAEMAGFELPIQSHPLQALVSE-LFEPVHPTVV--MSNHIHVYVSQAHKGELVMGAGI 287 (405)
T ss_dssp GHHHHHHHHTCCCCEEEEEEEEEEEE-EBCSCCCSEE--EETTTTEEEEECTTSEEEEEEEE
T ss_pred hHHHHHHHcCCCCCccccceeEEEec-CCccccCceE--EeCCCcEEEEEcCCCcEEEEecc
Confidence 98 67777765543322222222111 1111111121 23456788888877766665443
No 33
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.59 E-value=8.5e-14 Score=141.29 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=56.4
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecC
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG 245 (515)
..++...+...|.+.+.+.| ++|+++++|++++. +++.++|.+.+| ++.||.||+|+|
T Consensus 148 g~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~t~~g-~i~a~~VV~A~G 205 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAG-ATLRAGETVTELVP--------------------DADGVSVTTDRG-TYRAGKVVLACG 205 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEESSC-EEEEEEEEECCG
T ss_pred CEEcHHHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------cCCeEEEEECCC-EEEcCEEEEcCC
Confidence 35677889999999999888 99999999999976 334577777665 699999999999
Q ss_pred CC-chhhhhcCC
Q 010200 246 GK-SRVRELAGF 256 (515)
Q Consensus 246 ~~-S~vr~~l~~ 256 (515)
.+ +.+++.++.
T Consensus 206 ~~s~~l~~~~g~ 217 (397)
T 2oln_A 206 PYTNDLLEPLGA 217 (397)
T ss_dssp GGHHHHHGGGTC
T ss_pred cChHHHhhhcCC
Confidence 99 457777764
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.58 E-value=9.6e-14 Score=140.07 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=56.8
Q ss_pred EechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeE-EEcCCCcEEEeeEEEEecC
Q 010200 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~vV~AdG 245 (515)
.++...+...|.+.+++.| ++|+++++|++++. +++.+. |.+.+| ++.||.||.|+|
T Consensus 145 ~~~~~~l~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~v~gv~~~~g-~i~a~~VV~A~G 202 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYG-AKLLEYTEVKGFLI--------------------ENNEIKGVKTNKG-IIKTGIVVNATN 202 (382)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSSBEEEEEETTE-EEECSEEEECCG
T ss_pred eECHHHHHHHHHHHHHHCC-CEEECCceEEEEEE--------------------ECCEEEEEEECCc-EEECCEEEECcc
Confidence 4678899999999999988 99999999999986 334455 777777 799999999999
Q ss_pred CCc-hhhhhcCCc
Q 010200 246 GKS-RVRELAGFK 257 (515)
Q Consensus 246 ~~S-~vr~~l~~~ 257 (515)
.+| .+.+.++..
T Consensus 203 ~~s~~l~~~~g~~ 215 (382)
T 1y56_B 203 AWANLINAMAGIK 215 (382)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHcCCC
Confidence 998 466666543
No 35
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.56 E-value=2.2e-13 Score=137.64 Aligned_cols=115 Identities=10% Similarity=0.084 Sum_probs=73.0
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecC
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG 245 (515)
..++...+...|.+.+++.| ++++++++|++++. .++.+.+.+.+| ++.||.||.|+|
T Consensus 145 ~~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G 202 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARG-AKVLTHTRVEDFDI--------------------SPDSVKIETANG-SYTADKLIVSMG 202 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSCEEEEETTE-EEEEEEEEECCG
T ss_pred cEEeHHHHHHHHHHHHHHCC-CEEEcCcEEEEEEe--------------------cCCeEEEEeCCC-EEEeCEEEEecC
Confidence 35677899999999999998 99999999999986 334477777666 699999999999
Q ss_pred CCch-hhhhcCCccccccCCceEEEEEEEeec------CCceEEEEecCCCcEEEEecCCC-ceEEE
Q 010200 246 GKSR-VRELAGFKTTGWSYSQNAIICTVEHNK------ENYCAWQRFLPAGPIALLPIGDN-FSNIV 304 (515)
Q Consensus 246 ~~S~-vr~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~p~~~~-~~~~~ 304 (515)
.+|. +.+.++...+. .........++... .....+....+.+.++++|..++ ...+.
T Consensus 203 ~~~~~l~~~~g~~~pl--~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG 267 (389)
T 2gf3_A 203 AWNSKLLSKLNLDIPL--QPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLG 267 (389)
T ss_dssp GGHHHHGGGGTEECCC--EEEEEEEEEECCCHHHHBGGGTCCEEEEEETTEEEEEECBSTTCCEEEE
T ss_pred ccHHHHhhhhccCCce--EEEEEEEEEEecCcccccccccCCEEEEeCCCCcEEEcCCCCCCcEEEE
Confidence 9975 44444422211 11222222222221 01112222223446788888776 55554
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.54 E-value=1.5e-13 Score=149.03 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=55.8
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecC
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG 245 (515)
..++...+...|.+.+++.| ++|+++++|++++. +++.+.|.+.+|.++.||.||.|+|
T Consensus 412 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~i~Ad~VVlAtG 470 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQG-LQIYYQYQLQNFSR--------------------KDDCWLLNFAGDQQATHSVVVLANG 470 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCG
T ss_pred eeeCHHHHHHHHHHHHHhCC-CEEEeCCeeeEEEE--------------------eCCeEEEEECCCCEEECCEEEECCC
Confidence 45778899999999999998 99999999999987 3455888888888899999999999
Q ss_pred CCch
Q 010200 246 GKSR 249 (515)
Q Consensus 246 ~~S~ 249 (515)
.+|.
T Consensus 471 ~~s~ 474 (676)
T 3ps9_A 471 HQIS 474 (676)
T ss_dssp GGGG
T ss_pred cchh
Confidence 9986
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.54 E-value=4.7e-14 Score=142.10 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=58.8
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecC
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG 245 (515)
..++...+...|.+.+++.| ++|+++++|++++. +++.+.|++.+| ++.||.||.|+|
T Consensus 149 ~~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~~~V~t~~g-~i~a~~VV~A~G 206 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQ-GQVLCNHEALEIRR--------------------VDGAWEVRCDAG-SYRAAVLVNAAG 206 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEESSCCCCEEEE--------------------ETTEEEEECSSE-EEEESEEEECCG
T ss_pred ceECHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------eCCeEEEEeCCC-EEEcCEEEECCC
Confidence 45788999999999999998 99999999999986 334588888887 799999999999
Q ss_pred CCch-hhhhcCCc
Q 010200 246 GKSR-VRELAGFK 257 (515)
Q Consensus 246 ~~S~-vr~~l~~~ 257 (515)
.+|. +.+.++..
T Consensus 207 ~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 207 AWCDAIAGLAGVR 219 (381)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHhCCC
Confidence 9984 56666643
No 38
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.53 E-value=4.4e-13 Score=127.99 Aligned_cols=37 Identities=24% Similarity=0.479 Sum_probs=34.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
++||+|||||||||++|+.|+++ |++|+||||.+.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~----G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA----GHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCC
Confidence 58999999999999999999996 99999999998774
No 39
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.53 E-value=5.2e-13 Score=139.66 Aligned_cols=116 Identities=16% Similarity=0.073 Sum_probs=73.7
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEc---CCCc--EEEeeEE
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLV 240 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~g~--~~~ad~v 240 (515)
..++...+...|.+.+.+.| ++|+.+++|++++. ++..+.|.+ .+|+ ++.||.|
T Consensus 144 g~v~~~~l~~~l~~~a~~~G-v~i~~~~~V~~l~~--------------------~~~~~~V~~~d~~~G~~~~i~A~~V 202 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKG-GEVLTRTRATSARR--------------------ENGLWIVEAEDIDTGKKYSWQARGL 202 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTTCCEEEEEESCE
T ss_pred CEEcHHHHHHHHHHHHHHcC-CEEEcCcEEEEEEE--------------------eCCEEEEEEEECCCCCEEEEECCEE
Confidence 34788999999999999998 99999999999976 224455655 3565 7999999
Q ss_pred EEecCCCch-hhhh-cCCccccccCCceEEEEEEEeecCCceEEEEec-CCCcEEEEecCCCceE
Q 010200 241 VGADGGKSR-VREL-AGFKTTGWSYSQNAIICTVEHNKENYCAWQRFL-PAGPIALLPIGDNFSN 302 (515)
Q Consensus 241 V~AdG~~S~-vr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~p~~~~~~~ 302 (515)
|.|+|.+|. +++. ++......-.........++...+....+.... ++..++++|..++...
T Consensus 203 V~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~~~~~~~~~~~~~~~~~dg~~~~~~P~~~g~~~ 267 (501)
T 2qcu_A 203 VNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSI 267 (501)
T ss_dssp EECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEEEECSSSCSCEEEEECTTSCEEEEEEETTTEEE
T ss_pred EECCChhHHHHHHHhccCCcccccccceeEEEEECCCCCCceEEEeecCCCCEEEEEEcCCCcEE
Confidence 999999986 4553 543211112233333333332222222221113 3346788998766533
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.53 E-value=4.4e-13 Score=145.61 Aligned_cols=63 Identities=14% Similarity=0.082 Sum_probs=54.1
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCc-EEEeeEEEEec
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGAD 244 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~ad~vV~Ad 244 (515)
..++...+...|.+.+++.| ++|+++++|++++. +++.+.|.+.+|. ++.||.||.|+
T Consensus 407 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~~i~Ad~VVlAt 465 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNG-MTCHYQHELQRLKR--------------------IDSQWQLTFGQSQAAKHHATVILAT 465 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------CSSSEEEEEC-CCCCEEESEEEECC
T ss_pred eEECHHHHHHHHHHHHHhCC-CEEEeCCeEeEEEE--------------------eCCeEEEEeCCCcEEEECCEEEECC
Confidence 45678899999999999998 99999999999987 3345888888887 89999999999
Q ss_pred CCCch
Q 010200 245 GGKSR 249 (515)
Q Consensus 245 G~~S~ 249 (515)
|.+|.
T Consensus 466 G~~s~ 470 (689)
T 3pvc_A 466 GHRLP 470 (689)
T ss_dssp GGGTT
T ss_pred Ccchh
Confidence 99986
No 41
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.46 E-value=1e-11 Score=124.62 Aligned_cols=62 Identities=10% Similarity=0.176 Sum_probs=52.4
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecC
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG 245 (515)
..++...+...|.+.+.+.| ++++++++|++++. +++.+.+++.+|+ +.||.||.|+|
T Consensus 144 g~~~~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~-~~a~~vV~a~G 201 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAG-CAQLFNCPVTAIRH--------------------DDDGVTIETADGE-YQAKKAIVCAG 201 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSSEEEEESSCE-EEEEEEEECCG
T ss_pred cEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------cCCEEEEEECCCe-EEcCEEEEcCC
Confidence 45678899999999999988 99999999999976 2344778877774 99999999999
Q ss_pred CCch
Q 010200 246 GKSR 249 (515)
Q Consensus 246 ~~S~ 249 (515)
.+|.
T Consensus 202 ~~s~ 205 (372)
T 2uzz_A 202 TWVK 205 (372)
T ss_dssp GGGG
T ss_pred ccHH
Confidence 9874
No 42
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.46 E-value=1.2e-13 Score=140.55 Aligned_cols=156 Identities=20% Similarity=0.185 Sum_probs=93.7
Q ss_pred CCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCC-------CCCCCCCCCC-cEEEeCH-hHHHHH
Q 010200 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSN-------FIKKEDPPDP-RVSTVTP-ATISFF 121 (515)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~-------~~~~~~~~~~-~~~~l~~-~~~~~l 121 (515)
+++.++||+|||||++|+++|+.|++. |++|+|||+.+.++.+. |......... .-..-.+ .....+
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~----G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKR----GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL 98 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH
Confidence 345679999999999999999999996 99999999998764321 1000000000 0000011 112233
Q ss_pred HHcCCchhhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeC
Q 010200 122 KEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALL 201 (515)
Q Consensus 122 ~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~ 201 (515)
..+...+.+.-... .++.+..... ........+..+.+.|.+.+++.| ++|+++++|++++.
T Consensus 99 ~~~~~~~~~~~~~~---~Gi~~~~~~~-------------g~~~~~~~~~~l~~~L~~~l~~~G-v~i~~~~~V~~i~~- 160 (417)
T 3v76_A 99 ARYRPQDFVALVER---HGIGWHEKTL-------------GQLFCDHSAKDIIRMLMAEMKEAG-VQLRLETSIGEVER- 160 (417)
T ss_dssp HHSCHHHHHHHHHH---TTCCEEECST-------------TEEEESSCHHHHHHHHHHHHHHHT-CEEECSCCEEEEEE-
T ss_pred HhcCHHHHHHHHHH---cCCCcEEeeC-------------CEEeeCCCHHHHHHHHHHHHHHCC-CEEEECCEEEEEEE-
Confidence 33332211111000 0001111100 000012456789999999999888 99999999999976
Q ss_pred CCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCc
Q 010200 202 PSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S 248 (515)
+++.+.|.+.+| ++.||.||+|+|.+|
T Consensus 161 -------------------~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 161 -------------------TASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp -------------------ETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred -------------------eCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 345688888888 799999999999999
No 43
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.43 E-value=1.2e-12 Score=138.39 Aligned_cols=113 Identities=16% Similarity=0.101 Sum_probs=72.4
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe-eEEEcCC---C--cEEEeeE
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSD---G--TSLYAKL 239 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~---g--~~~~ad~ 239 (515)
..++...+...|.+.+.+.| ++|+.+++|+++.. .++. +.|.+.+ | .++.||.
T Consensus 165 g~vd~~~l~~~L~~~a~~~G-~~i~~~~~V~~l~~--------------------~~g~v~gV~~~d~~tg~~~~i~A~~ 223 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARG-AVALNYMKVESFIY--------------------DQGKVVGVVAKDRLTDTTHTIYAKK 223 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEEEEE
T ss_pred ceEcHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------------cCCeEEEEEEEEcCCCceEEEECCE
Confidence 35778899999999999998 99999999999986 2232 3354432 3 3799999
Q ss_pred EEEecCCCc-hhhhhcCCccccccCCceEEEEEEEeecCC-ceEEEEec-CCC-cEEEEecCCCc
Q 010200 240 VVGADGGKS-RVRELAGFKTTGWSYSQNAIICTVEHNKEN-YCAWQRFL-PAG-PIALLPIGDNF 300 (515)
Q Consensus 240 vV~AdG~~S-~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g-~~~~~p~~~~~ 300 (515)
||.|+|.|| .+++.++......-....+....++..... ........ +++ .++++|. ++.
T Consensus 224 VV~AaG~~s~~l~~~~g~~~~~~v~p~kG~~lvl~~~~~~~~~~~~~~~~~dgr~v~~iP~-~g~ 287 (561)
T 3da1_A 224 VVNAAGPWVDTLREKDRSKHGKYLKLSKGVHLVVDQSRFPLRQAVYFDTESDGRMIFAIPR-EGK 287 (561)
T ss_dssp EEECCGGGHHHHHHTTTCCCSSEEEEEEEEEEEEEGGGSCCSSEEEECCSSSCCCEEEEEE-TTE
T ss_pred EEECCCcchHHHHHhcCCCCCceEEeccEEEEEECCccCCCceEEEeccCCCCcEEEEEec-CCC
Confidence 999999999 667776654222223333444444433222 22221111 344 5678898 444
No 44
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.43 E-value=5.5e-12 Score=130.71 Aligned_cols=72 Identities=18% Similarity=0.340 Sum_probs=50.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCC------cEEEEEcCCCCCCCCCCCCCC-CC--CCC--cEEEeCHhHHHHHHH
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKH------LSVAIIDSNPALGKSNFIKKE-DP--PDP--RVSTVTPATISFFKE 123 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G------~~V~v~E~~~~~~~~~~~~~~-~~--~~~--~~~~l~~~~~~~l~~ 123 (515)
.+||+|||||++||++|+.|++. | ++|+|||+.+.++.+...... +. ..+ ......+...+++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~----G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~ 80 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE----IKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKD 80 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----HTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHh----ccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHH
Confidence 58999999999999999999996 7 999999999877543221000 00 000 112235677889999
Q ss_pred cCCchhh
Q 010200 124 IGAWQYV 130 (515)
Q Consensus 124 lgl~~~~ 130 (515)
+|+...+
T Consensus 81 lgl~~~~ 87 (470)
T 3i6d_A 81 LGLEHLL 87 (470)
T ss_dssp TTCCTTE
T ss_pred cCCccee
Confidence 9986554
No 45
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.41 E-value=1.7e-13 Score=141.18 Aligned_cols=170 Identities=23% Similarity=0.278 Sum_probs=98.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
.++||+|||||++|+++|+.|++. |.+|+||||.+.++.+......+.... .... ...+++..++....+...
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~----G~~V~llEk~~~~g~~~~~sg~g~~~~--~~~~-~~~~~~~~~~~~~~~~~~ 97 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEE----GANVLLLDKGNKLGRKLAISGGGRCNV--TNRL-PLDEIVKHIPGNGRFLYS 97 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCHHHHHTGGGTCCC--EECS-CHHHHHHTCTBTGGGGHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC----CCCEEEEECCCCCCceeEEeCCCceec--cCcc-cHHHHHHHhccChHHHHH
Confidence 458999999999999999999996 899999999887642211000000000 0000 001222222211111000
Q ss_pred hccccc---eEEEEeCCCccceeeecccCCCCcceEEe----chHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCC
Q 010200 134 RHAYFD---KMQVWDYTGLGYTKYNARDVNKEILGCVV----ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSS 206 (515)
Q Consensus 134 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~ 206 (515)
....+. .+.++...+. .+.. ...+..+ ....+.+.|.+.+++.| ++|+++++|+++..
T Consensus 98 ~~~~~~~~~~~~~~~~~G~---~~~~-----~~~g~~~p~~~~~~~l~~~L~~~~~~~G-V~i~~~~~V~~i~~------ 162 (447)
T 2i0z_A 98 AFSIFNNEDIITFFENLGV---KLKE-----EDHGRMFPVSNKAQSVVDALLTRLKDLG-VKIRTNTPVETIEY------ 162 (447)
T ss_dssp HHHHSCHHHHHHHHHHTTC---CEEE-----CGGGEEEETTCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE------
T ss_pred HHHhcCHHHHHHHHHhcCC---ceEE-----eeCCEEECCCCCHHHHHHHHHHHHHHCC-CEEEeCcEEEEEEe------
Confidence 000000 0000000000 0000 0011111 35788899999999887 99999999999976
Q ss_pred cccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCc-----------hhhhhcCCcc
Q 010200 207 ISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS-----------RVRELAGFKT 258 (515)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S-----------~vr~~l~~~~ 258 (515)
+++..+.|.+.+|+++.||.||+|+|.+| .+++.+|...
T Consensus 163 -------------~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 163 -------------ENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp -------------ETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred -------------cCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 12233678888887899999999999999 7888877553
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.41 E-value=3.3e-13 Score=141.16 Aligned_cols=147 Identities=16% Similarity=0.177 Sum_probs=92.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCC---------------CCC----CC--CCCCCcE
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSN---------------FIK----KE--DPPDPRV 110 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~---------------~~~----~~--~~~~~~~ 110 (515)
...++||+||||||+||++|+.|++. |++|+|||+.+.++.+. +.. .+ ....+.-
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~----G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl 179 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQM----GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKL 179 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHT----TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC----CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCce
Confidence 34458999999999999999999996 99999999987541100 000 00 0000000
Q ss_pred ---E----EeCHhHHHHHHHcCCchhhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhc
Q 010200 111 ---S----TVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQN 183 (515)
Q Consensus 111 ---~----~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~ 183 (515)
. .......+.+...|....+... ..+.........+...|.+.+++
T Consensus 180 ~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~---------------------------~~p~~G~~~~~~l~~~L~~~l~~ 232 (549)
T 3nlc_A 180 YSQVKDPNFYGRKVITEFVEAGAPEEILYV---------------------------SKPHIGTFKLVTMIEKMRATIIE 232 (549)
T ss_dssp CCCSCCTTCHHHHHHHHHHHTTCCGGGGTB---------------------------SSCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccHHHHHHHHHHcCCCceEeec---------------------------cccccccchHHHHHHHHHHHHHh
Confidence 0 0001222223333322111100 00111123457788999999998
Q ss_pred CCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 184 TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 184 ~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.| ++|+++++|++++. +++..+.|.+.+|+++.||+||+|+|.+|.
T Consensus 233 ~G-v~I~~~t~V~~I~~-------------------~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 233 LG-GEIRFSTRVDDLHM-------------------EDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp TT-CEEESSCCEEEEEE-------------------SSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred cC-CEEEeCCEEEEEEE-------------------eCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 87 99999999999986 122345588889989999999999999995
No 47
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=5.2e-12 Score=126.37 Aligned_cols=72 Identities=13% Similarity=0.206 Sum_probs=58.6
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCC--cEEEeeEEEEe
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGA 243 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~ad~vV~A 243 (515)
..++...+...|.+.+++.| ++|+++++|++++. +.+..+.|.+.+| .++.||.||.|
T Consensus 145 ~~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDG-AQLVFHTPLIAGRV-------------------RPEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------CTTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred EEECHHHHHHHHHHHHHHCC-CEEECCCEEEEEEE-------------------cCCceEEEEECCCceeEEEeCEEEEC
Confidence 45778899999999999998 99999999999986 1123377888887 37999999999
Q ss_pred cCCCc-hhhhhc-CCc
Q 010200 244 DGGKS-RVRELA-GFK 257 (515)
Q Consensus 244 dG~~S-~vr~~l-~~~ 257 (515)
+|.+| .+.+.+ |.+
T Consensus 205 ~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 205 AGLHAPGLARRIEGIP 220 (369)
T ss_dssp CGGGHHHHHHTEETSC
T ss_pred CCcchHHHHHHhcCCC
Confidence 99998 566666 654
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.40 E-value=1.5e-12 Score=133.80 Aligned_cols=63 Identities=13% Similarity=0.058 Sum_probs=54.6
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCC---eeEEEEeCCCCCCcccCCCCCcccccccCCeeE-EEcCCCcEEEeeEEE
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPS---RLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVV 241 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~vV 241 (515)
..++...+...|.+.+++.| ++|++++ +|++++. .++.++ |.+.+|+++.||.||
T Consensus 156 g~~~~~~~~~~L~~~a~~~G-v~i~~~t~~~~V~~i~~--------------------~~~~v~gV~t~~G~~i~Ad~VV 214 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMG-VKFVTGTPQGRVVTLIF--------------------ENNDVKGAVTADGKIWRAERTF 214 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESTTTTCEEEEEE--------------------ETTEEEEEEETTTEEEECSEEE
T ss_pred EEecHHHHHHHHHHHHHhcC-CEEEeCCcCceEEEEEe--------------------cCCeEEEEEECCCCEEECCEEE
Confidence 45667899999999999998 9999999 9999986 334566 888899889999999
Q ss_pred EecCCCch
Q 010200 242 GADGGKSR 249 (515)
Q Consensus 242 ~AdG~~S~ 249 (515)
.|+|.+|.
T Consensus 215 ~AtG~~s~ 222 (438)
T 3dje_A 215 LCAGASAG 222 (438)
T ss_dssp ECCGGGGG
T ss_pred ECCCCChh
Confidence 99999986
No 49
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=9e-13 Score=133.58 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=90.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCC-------CCCCCCCCCCC-cEEEeCHh-HHHHHHHc
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS-------NFIKKEDPPDP-RVSTVTPA-TISFFKEI 124 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~-------~~~~~~~~~~~-~~~~l~~~-~~~~l~~l 124 (515)
.++||+|||||++|+++|+.|++. |.+|+||||.+.++.+ .|......... .-+.-.+. ....+..+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~----G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~ 78 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL----GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARY 78 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC----CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhC
Confidence 468999999999999999999996 9999999999876421 11100000000 00000000 01112222
Q ss_pred CCch---hhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeC
Q 010200 125 GAWQ---YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALL 201 (515)
Q Consensus 125 gl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~ 201 (515)
...+ .+...+. .+..... ...++ .. ....+.+.|.+.+++.| ++|+++++|+++..
T Consensus 79 ~~~~~~~~~~~~Gi------~~~~~~~--g~~~p----------~~-~~~~l~~~L~~~~~~~G-v~i~~~~~v~~i~~- 137 (401)
T 2gqf_A 79 TNWDFISLVAEQGI------TYHEKEL--GQLFC----------DE-GAEQIVEMLKSECDKYG-AKILLRSEVSQVER- 137 (401)
T ss_dssp CHHHHHHHHHHTTC------CEEECST--TEEEE----------TT-CTHHHHHHHHHHHHHHT-CEEECSCCEEEEEE-
T ss_pred CHHHHHHHHHhCCC------ceEECcC--CEEcc----------CC-CHHHHHHHHHHHHHHCC-CEEEeCCEEEEEEc-
Confidence 1111 1111111 0100000 00011 01 56788899999998888 99999999999976
Q ss_pred CCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCc
Q 010200 202 PSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S 248 (515)
+++ + ....+.|++.+| ++.||.||+|+|.+|
T Consensus 138 --------~~~--g-----~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 138 --------IQN--D-----EKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp --------CCS--C-----SSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred --------ccC--c-----CCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 100 0 024477877776 799999999999999
No 50
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.37 E-value=8.2e-12 Score=120.54 Aligned_cols=145 Identities=21% Similarity=0.273 Sum_probs=95.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
..+||+|||||++|+++|+.|++. +|++|+|+||.+.++...+.... ......+.....++++++|+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~---~G~~V~viEk~~~~gg~~~~~~~---~~~~~~~~~~~~~~l~~~G~~------ 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN---PNVQVAIIEQSVSPGGGAWLGGQ---LFSAMIVRKPAHLFLDEIGVA------ 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS---TTSCEEEEESSSSCCTTTTCCST---TCCCEEEETTTHHHHHHHTCC------
T ss_pred cccCEEEECccHHHHHHHHHHHHc---CCCeEEEEECCCCCCCceecCCc---chHHHHcCcHHHHHHHHcCCC------
Confidence 458999999999999999999994 28999999999877432221110 111233334455566655541
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
+.. . + .+....+...+...|.+.+.+..+++++++++|+++..
T Consensus 106 ----~~~-----~-~--------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~------------- 148 (284)
T 1rp0_A 106 ----YDE-----Q-D--------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIV------------- 148 (284)
T ss_dssp ----CEE-----C-S--------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEE-------------
T ss_pred ----ccc-----C-C--------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-------------
Confidence 110 0 0 00012256788888998887643399999999999976
Q ss_pred CcccccccCC---eeEEEc-----C--CC-----cEEEeeEEEEecCCCchhhhhc
Q 010200 214 SATTLFTKGH---LAKLDL-----S--DG-----TSLYAKLVVGADGGKSRVRELA 254 (515)
Q Consensus 214 ~~~~~~~~~~---~~~v~~-----~--~g-----~~~~ad~vV~AdG~~S~vr~~l 254 (515)
+.. .+.+.. . +| .++.+|.||+|+|.+|.++...
T Consensus 149 -------~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 149 -------KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp -------ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred -------cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 112 233321 1 22 4799999999999999987764
No 51
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.37 E-value=3e-11 Score=119.91 Aligned_cols=146 Identities=18% Similarity=0.140 Sum_probs=81.5
Q ss_pred ccEEEECCCHHHHHHHHHHhc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCC-------CCcEEEeCHh----HHHHH
Q 010200 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPP-------DPRVSTVTPA----TISFF 121 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~-------~~~~~~l~~~----~~~~l 121 (515)
+||+|||||++||++|+.|++ . |++|+||||...++.+......... ........+. ..+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~----G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG----PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C----CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC----CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHH
Confidence 589999999999999999999 7 8999999998766432110000000 0001111111 11222
Q ss_pred HHcCCchhhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEe--chHHHHHHHHHHHhcCCCceEEcCCeeEEEE
Q 010200 122 KEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVV--ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMA 199 (515)
Q Consensus 122 ~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~ 199 (515)
+.+ ...+. +..|.......... .....+.. .-..+.+.|.+.+ | ++|+++++|++++
T Consensus 78 ~~~------~~~g~-----~~~~~~~~~~~~~~------~~~~~~~~~~g~~~l~~~l~~~~---g-~~i~~~~~V~~i~ 136 (342)
T 3qj4_A 78 DEL------LAYGV-----LRPLSSPIEGMVMK------EGDCNFVAPQGISSIIKHYLKES---G-AEVYFRHRVTQIN 136 (342)
T ss_dssp HHH------HHTTS-----CEECCSCEETCCC--------CCEEEECTTCTTHHHHHHHHHH---T-CEEESSCCEEEEE
T ss_pred HHH------HhCCC-----eecCchhhcceecc------CCccceecCCCHHHHHHHHHHhc---C-CEEEeCCEEEEEE
Confidence 211 11110 00111000000000 00001111 1234555555554 5 8999999999998
Q ss_pred eCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCC
Q 010200 200 LLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 246 (515)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~ 246 (515)
. .++.++|.+.+|+++.+|.||.|...
T Consensus 137 ~--------------------~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 137 L--------------------RDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp E--------------------CSSSEEEEESSSCCEEESEEEECSCH
T ss_pred E--------------------cCCEEEEEECCCCEEEcCEEEECCCH
Confidence 7 44568899988888999999999874
No 52
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.36 E-value=4e-12 Score=124.24 Aligned_cols=164 Identities=16% Similarity=0.220 Sum_probs=98.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
..+||+||||||+||++|+.|++.. +|++|+|+|+...++...+.. ........+.+...++|+++|+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~--~G~~V~LiEk~~~~GGg~~~~---g~~~~~~~~~~~~~~~L~~~Gv~------ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLR--PDLRITIVEAGVAPGGGAWLG---GQLFSAMVMRKPADVFLDEVGVP------ 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHC--TTSCEEEEESSSSCCTTTTCC---BTTCCCEEEETTTHHHHHHHTCC------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcC--CCCEEEEEeCCCccCCccccC---CccchhhhcchHHHHHHHHcCCc------
Confidence 3589999999999999999999831 289999999998775333311 11122333446667777777762
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCC-CcccCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSS-SISVDST 212 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~-~~~~~~~ 212 (515)
+.. .+ .. ....+..++.+.|.+.+.+..+++++++++|+++..+.+.. .....++
T Consensus 147 ----~~~------~G--~~------------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~ 202 (344)
T 3jsk_A 147 ----YED------EG--DY------------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDD 202 (344)
T ss_dssp ----CEE------CS--SE------------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------
T ss_pred ----ccc------cC--Ce------------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccc
Confidence 110 00 00 01123567789999999886449999999999997622100 0000000
Q ss_pred CCcccccc---cCCeeEEEc----C--------CCcEEEeeEEEEecCCCchhhhhc
Q 010200 213 PSATTLFT---KGHLAKLDL----S--------DGTSLYAKLVVGADGGKSRVRELA 254 (515)
Q Consensus 213 ~~~~~~~~---~~~~~~v~~----~--------~g~~~~ad~vV~AdG~~S~vr~~l 254 (515)
... +.. ...++.+.+ . ++.+++|++||+|||..|++++.+
T Consensus 203 g~~--~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 203 GEA--EDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp --------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred ccc--ccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 000 000 111222221 1 224799999999999999976665
No 53
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.36 E-value=1.2e-12 Score=133.30 Aligned_cols=70 Identities=10% Similarity=0.052 Sum_probs=53.4
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeE---------EEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEE
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLT---------SMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY 236 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~---------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ 236 (515)
..++...+...|.+.+.+.| ++++++++|+ +++. +++.+.|.+.+| ++.
T Consensus 167 g~v~~~~l~~~L~~~~~~~G-v~i~~~~~v~~~~g~~~~~~i~~--------------------~~~~v~v~~~~g-~i~ 224 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQG-AGLLLNTRAELVPGGVRLHRLTV--------------------TNTHQIVVHETR-QIR 224 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTT-CEEECSCEEEEETTEEEEECBCC---------------------------CBCCE-EEE
T ss_pred EEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEeccccccccceEe--------------------eCCeEEEEECCc-EEE
Confidence 45778899999999999988 9999999999 7754 223356666666 799
Q ss_pred eeEEEEecCCCc-hhhh-hcCCc
Q 010200 237 AKLVVGADGGKS-RVRE-LAGFK 257 (515)
Q Consensus 237 ad~vV~AdG~~S-~vr~-~l~~~ 257 (515)
||.||+|+|.+| .+++ .++..
T Consensus 225 a~~VV~A~G~~s~~l~~~~~g~~ 247 (405)
T 3c4n_A 225 AGVIIVAAGAAGPALVEQGLGLH 247 (405)
T ss_dssp EEEEEECCGGGHHHHHHHHHCCC
T ss_pred CCEEEECCCccHHHHHHHhcCCC
Confidence 999999999999 6777 77654
No 54
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.34 E-value=9.3e-13 Score=139.80 Aligned_cols=160 Identities=18% Similarity=0.140 Sum_probs=95.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhh-
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYV- 130 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~- 130 (515)
...++||||||||++||++|+.|++. |++|+||||.+.++..... .+.++... .....+.+++.+.+
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~----G~~V~vlEk~~~~gg~s~~------s~gg~~~~--~~~~~~~~g~~ds~~ 185 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKA----GANVILVDKAPFSGGNSMI------SAGGMNAV--GTKQQTAHGVEDKVE 185 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSSCTTGGG------CCSCEECS--SCHHHHHTTCCCCHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCCCCcccc------cCceeEcc--CCHHHHHhCCCCCHH
Confidence 34568999999999999999999996 9999999999877432211 11122111 11112222221111
Q ss_pred ---------------------------------hhhhccccceEEEEeCCCccceeeecccCCCCcceE-----EechHH
Q 010200 131 ---------------------------------QQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGC-----VVENKV 172 (515)
Q Consensus 131 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~r~~ 172 (515)
.+.+. ++..+. ..+. ......+ .+....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv-~~~~~~---~~~g----------~~~~r~~~~~~~~~~~~~ 251 (566)
T 1qo8_A 186 WFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGA-NLDDLK---RSGG----------ARVDRTHRPHGGKSSGPE 251 (566)
T ss_dssp HHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCCEEE---CCTT----------CSSCCEEECSSSSCHHHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCC-cccccc---ccCC----------CCCCceeecCCCCCCHHH
Confidence 11111 111100 0000 0000011 134678
Q ss_pred HHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCc--EEEeeEEEEecCCCchh
Q 010200 173 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 173 l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~ad~vV~AdG~~S~v 250 (515)
+...|.+.+++.| ++|+++++|+++..+ +++ ...++.+...+|+ ++.+|.||+|+|.+|..
T Consensus 252 l~~~L~~~~~~~g-v~i~~~~~v~~l~~~-----------~~g-----~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 252 IIDTLRKAAKEQG-IDTRLNSRVVKLVVN-----------DDH-----SVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp HHHHHHHHHHHTT-CCEECSEEEEEEEEC-----------TTS-----BEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred HHHHHHHHHHhcC-CEEEeCCEEEEEEEC-----------CCC-----cEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 9999999999988 999999999999861 000 1113444444675 68999999999999987
Q ss_pred hhhc
Q 010200 251 RELA 254 (515)
Q Consensus 251 r~~l 254 (515)
++.+
T Consensus 315 ~~~~ 318 (566)
T 1qo8_A 315 KEMI 318 (566)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 55
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.32 E-value=5e-11 Score=119.26 Aligned_cols=39 Identities=31% Similarity=0.389 Sum_probs=34.6
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
|..++||+|||||++|+++|+.|++. |++|+|+||....
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~----G~~V~vle~~~~~ 41 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARK----GYSVHILARDLPE 41 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhC----CCEEEEEeccCCC
Confidence 34578999999999999999999996 9999999998743
No 56
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.32 E-value=7.1e-11 Score=122.63 Aligned_cols=73 Identities=16% Similarity=0.276 Sum_probs=50.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCC--cEEEEEcCCCCCCCCCCCCC-CCCC--C--CcEEEeCHhHHHHHHHcCCc
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNPALGKSNFIKK-EDPP--D--PRVSTVTPATISFFKEIGAW 127 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G--~~V~v~E~~~~~~~~~~~~~-~~~~--~--~~~~~l~~~~~~~l~~lgl~ 127 (515)
.+||+|||||++||++|+.|++. | ++|+|||+.+.++....... .+.. . .......+...++++++|+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~----g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~ 79 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA----FPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLG 79 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH----CTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCG
T ss_pred cccEEEECCCHHHHHHHHHHHHh----CCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCc
Confidence 57999999999999999999996 7 99999999887653221000 0000 0 01122345677899999986
Q ss_pred hhhh
Q 010200 128 QYVQ 131 (515)
Q Consensus 128 ~~~~ 131 (515)
..+.
T Consensus 80 ~~~~ 83 (475)
T 3lov_A 80 EKLV 83 (475)
T ss_dssp GGEE
T ss_pred ceEe
Confidence 6543
No 57
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.31 E-value=1.5e-11 Score=110.07 Aligned_cols=118 Identities=20% Similarity=0.204 Sum_probs=89.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
+||+|||||++|+.+|..|++. |.+|+|+|+.+....... .+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~----g~~v~lie~~~~~~~~~~-----------------------------~~~---- 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA----GLKVLVLDGGRSKVKGVS-----------------------------RVP---- 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSCCTTTTCS-----------------------------CCC----
T ss_pred CeEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCcccCch-----------------------------hhh----
Confidence 7999999999999999999996 899999999873310000 000
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
. ++ ... ..+....+.+.+.+.+++.| ++++++ +|++++.
T Consensus 45 -~----------------~~--~~~-----~~~~~~~~~~~l~~~~~~~g-v~v~~~-~v~~i~~--------------- 83 (180)
T 2ywl_A 45 -N----------------YP--GLL-----DEPSGEELLRRLEAHARRYG-AEVRPG-VVKGVRD--------------- 83 (180)
T ss_dssp -C----------------ST--TCT-----TCCCHHHHHHHHHHHHHHTT-CEEEEC-CCCEEEE---------------
T ss_pred -c----------------cC--CCc-----CCCCHHHHHHHHHHHHHHcC-CEEEeC-EEEEEEE---------------
Confidence 0 00 000 01345788899999999888 999999 9999976
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcCCc
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFK 257 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~ 257 (515)
+++.+.+.+++| ++.+|+||.|+|.++.+++.++.+
T Consensus 84 -----~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 84 -----MGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp -----CSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred -----cCCEEEEEECCC-EEEECEEEECCCCCCCccccCCCC
Confidence 334478888888 899999999999999887877654
No 58
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.29 E-value=9.8e-12 Score=128.15 Aligned_cols=85 Identities=16% Similarity=0.189 Sum_probs=56.7
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe-eEEEcCCCcEE--EeeEEEE
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSL--YAKLVVG 242 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~~--~ad~vV~ 242 (515)
..++...+...|.+.+++.| ++|+++++|++++..+.. ....+..+. ...+.. +.|.+.+| ++ .||.||.
T Consensus 176 ~~~~~~~l~~~L~~~~~~~G-v~i~~~~~V~~i~~~~~~-~~~~~~~~~----~~~~~~v~~V~t~~g-~i~~~Ad~VV~ 248 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAG-VEFIFGRRVVGVELKPRV-ELGIEGEPL----PWQEARASAAVLSDG-TRVEVGEKLVV 248 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEESCCEEEEEEEESS-CCCCTTSSC----TTSCEEEEEEEETTS-CEEEEEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHhCC-CEEEcCCeEEEEEecccc-ccccccccc----ccCCCceEEEEeCCC-EEeecCCEEEE
Confidence 45677899999999999998 999999999999751000 000000000 001123 35777777 58 9999999
Q ss_pred ecCCCch-hhhhcCCc
Q 010200 243 ADGGKSR-VRELAGFK 257 (515)
Q Consensus 243 AdG~~S~-vr~~l~~~ 257 (515)
|+|.+|. +.+.++..
T Consensus 249 AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 249 AAGVWSNRLLNPLGID 264 (448)
T ss_dssp CCGGGHHHHHGGGTCC
T ss_pred CCCcCHHHHHHHcCCC
Confidence 9999987 66666543
No 59
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.28 E-value=3.5e-12 Score=135.56 Aligned_cols=157 Identities=15% Similarity=0.038 Sum_probs=92.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhh--
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYV-- 130 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~-- 130 (515)
..++||||||||++||++|+.|++. |++|+||||.+.++..... .+.++.... ....+++|+.+..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~----G~~V~vlEk~~~~gg~s~~------a~gg~~~~~--~~~~~~~g~~ds~~~ 191 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS----GAKVILIEKEPVIGGNAKL------AAGGMNAAW--TDQQKAKKITDSPEL 191 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTTGGG------CCSCEECSS--CHHHHHTTCCCCHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCCCCchhh------cCceEEeCC--CHHHHHhCCCCCHHH
Confidence 3468999999999999999999996 9999999999877432211 111222111 1112222221111
Q ss_pred --------------------------------hhhhccccceEEEEeCCCccceeeecccCCCCcceEE-----echHHH
Q 010200 131 --------------------------------QQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCV-----VENKVL 173 (515)
Q Consensus 131 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~r~~l 173 (515)
.+.+. ++..+. ..+ .......+. .....+
T Consensus 192 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv-~~~~~~---~~~----------g~~~~r~~~~~~g~~~g~~l 257 (571)
T 1y0p_A 192 MFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGA-DLTDVG---MMG----------GASVNRAHRPTGGAGVGAHV 257 (571)
T ss_dssp HHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCCEEE---CCT----------TCSSCCEEESTTTCCHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCC-CCccCc---ccC----------CcCCCeeEecCCCCCCHHHH
Confidence 11111 111100 000 000000111 345789
Q ss_pred HHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCc--EEEeeEEEEecCCCchhh
Q 010200 174 HSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKSRVR 251 (515)
Q Consensus 174 ~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~ad~vV~AdG~~S~vr 251 (515)
...|.+.+++.| ++|+++++|+++..+ +++ ...++.+...+|+ ++.+|.||+|+|.+|..+
T Consensus 258 ~~~L~~~~~~~g-v~i~~~~~v~~l~~~-----------~~g-----~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 258 VQVLYDNAVKRN-IDLRMNTRGIEVLKD-----------DKG-----TVKGILVKGMYKGYYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHHHHTT-CEEESSEEEEEEEEC-----------TTS-----CEEEEEEEETTTEEEEEECSEEEECCCCCTTCH
T ss_pred HHHHHHHHHhcC-CEEEeCCEeeEeEEc-----------CCC-----eEEEEEEEeCCCcEEEEECCeEEEeCCCcccCH
Confidence 999999999988 999999999999861 001 1112444433665 689999999999999754
Q ss_pred h
Q 010200 252 E 252 (515)
Q Consensus 252 ~ 252 (515)
+
T Consensus 321 ~ 321 (571)
T 1y0p_A 321 E 321 (571)
T ss_dssp H
T ss_pred H
Confidence 4
No 60
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.28 E-value=1.2e-11 Score=115.58 Aligned_cols=132 Identities=20% Similarity=0.218 Sum_probs=89.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
+++||+|||||++|+.+|+.|++. |.+|+|+|+........|. .... .+.. ..+++++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~----g~~v~lie~~~~~~G~~~~-----~~~~--~~~~--~~~~~~~~-------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK----GVRVGLLTQSLDAVMMPFL-----PPKP--PFPP--GSLLERAY-------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSS-----CCCS--CCCT--TCHHHHHC--------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEecCCCcCCcccC-----cccc--ccch--hhHHhhhc--------
Confidence 468999999999999999999996 9999999998432111110 0000 0000 00111100
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
+ ... . ++..+...|.+.+++.++++++ +++|+++..
T Consensus 61 -----------d--------------~~g---~--~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~------------- 96 (232)
T 2cul_A 61 -----------D--------------PKD---E--RVWAFHARAKYLLEGLRPLHLF-QATATGLLL------------- 96 (232)
T ss_dssp -----------C--------------TTC---C--CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-------------
T ss_pred -----------c--------------CCC---C--CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE-------------
Confidence 0 000 0 6788999999999987339988 579999976
Q ss_pred CcccccccCCe-eEEEcCCCcEEEeeEEEEecCCCchhhhhcCCc
Q 010200 214 SATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSRVRELAGFK 257 (515)
Q Consensus 214 ~~~~~~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~ 257 (515)
+++. +.+.+.+|+++.||+||.|+|.+|..+..+|..
T Consensus 97 -------~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~ 134 (232)
T 2cul_A 97 -------EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGV 134 (232)
T ss_dssp -------ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTE
T ss_pred -------eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCc
Confidence 2233 457778888899999999999999988776543
No 61
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.28 E-value=9.4e-11 Score=122.57 Aligned_cols=64 Identities=17% Similarity=0.302 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe-eEEEcCCCcEEEeeEEEEecCCCch
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
..+.+.|.+.+++.| ++|+++++|++|+. +++. ..|+++||+++.||.||.+.+.+..
T Consensus 221 ~~l~~aL~~~~~~~G-g~I~~~~~V~~I~~--------------------~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 221 GALVQGMIKLFQDLG-GEVVLNARVSHMET--------------------TGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred cchHHHHHHHHHHhC-CceeeecceeEEEe--------------------eCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 467788999999998 89999999999987 3344 4588899999999999999988887
Q ss_pred hhhhcC
Q 010200 250 VRELAG 255 (515)
Q Consensus 250 vr~~l~ 255 (515)
.++.++
T Consensus 280 ~~~Ll~ 285 (501)
T 4dgk_A 280 YRDLLS 285 (501)
T ss_dssp ------
T ss_pred HHHhcc
Confidence 776663
No 62
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.27 E-value=1.4e-11 Score=123.19 Aligned_cols=126 Identities=20% Similarity=0.208 Sum_probs=90.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
+..+||+||||||+|+++|+.|++. |++|+|||+.+.++ + ... ..
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~g--------------g------~~~---------~~-- 56 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMN----NISCRIIESMPQLG--------------G------QLA---------AL-- 56 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC--------------H------HHH---------HT--
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCCEEEEecCCCCC--------------C------ccc---------cc--
Confidence 4568999999999999999999996 99999999987651 0 000 00
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
. +.. ..++... . ..+.+..+...|.+.+.+.+ ++++++++|+.+..
T Consensus 57 --~-~~~--~~~~~~~-------------~---~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~------------ 102 (360)
T 3ab1_A 57 --Y-PEK--HIYDVAG-------------F---PEVPAIDLVESLWAQAERYN-PDVVLNETVTKYTK------------ 102 (360)
T ss_dssp --C-TTS--EECCSTT-------------C---SSEEHHHHHHHHHHHHHTTC-CEEECSCCEEEEEE------------
T ss_pred --C-CCc--ccccCCC-------------C---CCCCHHHHHHHHHHHHHHhC-CEEEcCCEEEEEEE------------
Confidence 0 000 0010000 0 01457788899999998887 89999999999976
Q ss_pred CCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhc
Q 010200 213 PSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELA 254 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l 254 (515)
+....+++.+.+|.++.+|.||+|+|.+|..++.+
T Consensus 103 -------~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 103 -------LDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp -------CTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCC
T ss_pred -------CCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCC
Confidence 11135788888888899999999999988665554
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.27 E-value=1.1e-11 Score=122.42 Aligned_cols=125 Identities=23% Similarity=0.216 Sum_probs=90.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
++++||+||||||+|+++|+.|++. |++|+|||+.+.++ + .. . ..
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~g--------------g------~~--~-------~~-- 47 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMR----GLSFRFVDPLPEPG--------------G------QL--T-------AL-- 47 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSSC--------------H------HH--H-------HT--
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC--------------C------ee--e-------cc--
Confidence 3568999999999999999999995 89999999987651 0 00 0 00
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
. +.. .+++... . ..+.+..+...|.+.+.+.+ ++++++++|+.++.
T Consensus 48 --~-~~~--~~~~~~~-------------~---~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~------------ 93 (335)
T 2zbw_A 48 --Y-PEK--YIYDVAG-------------F---PKVYAKDLVKGLVEQVAPFN-PVYSLGERAETLER------------ 93 (335)
T ss_dssp --C-TTS--EECCSTT-------------C---SSEEHHHHHHHHHHHHGGGC-CEEEESCCEEEEEE------------
T ss_pred --C-CCc--eeeccCC-------------C---CCCCHHHHHHHHHHHHHHcC-CEEEeCCEEEEEEE------------
Confidence 0 000 0110000 0 01456788888999888887 89999999999976
Q ss_pred CCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhc
Q 010200 213 PSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELA 254 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l 254 (515)
..+.+++.+.+|.++.+|.||.|+|.+|...+..
T Consensus 94 --------~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 94 --------EGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp --------ETTEEEEEETTSCEEEEEEEEECCTTSEEEECCC
T ss_pred --------CCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCC
Confidence 2236778888888899999999999987655544
No 64
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.26 E-value=1.5e-10 Score=120.17 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe-eEEEcCCCcEEEeeEEEEecCCCch
Q 010200 172 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 172 ~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.+.+.|.+.+.+.| ++|+++++|++|+. .++. +.|++ ++.++.||.||.|.+.+..
T Consensus 235 ~l~~~l~~~l~~~g-~~i~~~~~V~~i~~--------------------~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRG-VSVLRGQPVCGLSL--------------------QAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------CGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcC-CEEEeCCEEEEEEE--------------------cCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 47788888888887 89999999999986 2233 77776 4457999999999987544
No 65
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.26 E-value=3.9e-11 Score=126.54 Aligned_cols=157 Identities=15% Similarity=0.177 Sum_probs=99.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCcEEEeC-HhHHHHHHHcCC-chhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVT-PATISFFKEIGA-WQYV 130 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~lgl-~~~~ 130 (515)
.++||||||||+||+++|+.|++. |.+|+|+|+.. ..+..+|.. ...++. ....+.+..++- ....
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~----G~kVlLIEk~~~~iG~~~Cnp-------s~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM----GQQTLLLTHNIDTLGQMSCNP-------AIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSSSS-------EEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhC----CCCEEEEeecccccccccccc-------cccchhhHHHHHHHHHhccHHHHH
Confidence 469999999999999999999996 99999999985 343334411 011111 122333444432 2211
Q ss_pred hhhhccccceEEE--EeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcc
Q 010200 131 QQHRHAYFDKMQV--WDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (515)
Q Consensus 131 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~ 208 (515)
... ..+.+ ....... ........+++..+...|.+.+++..+++|+ +++|+++..
T Consensus 96 ~d~-----~gi~f~~l~~~kgp---------av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-------- 152 (651)
T 3ces_A 96 IDQ-----AGIQFRILNASKGP---------AVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-------- 152 (651)
T ss_dssp HHH-----HEEEEEEESTTSCG---------GGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--------
T ss_pred hhh-----cccchhhhhcccCc---------ccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe--------
Confidence 111 11221 1110000 0011124688889999999999884339984 679999975
Q ss_pred cCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhcC
Q 010200 209 VDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAG 255 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~ 255 (515)
+++..+.|.+.+|.++.||.||+|+|.+|..+...|
T Consensus 153 -----------e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 153 -----------ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp -----------SSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEECC
T ss_pred -----------cCCEEEEEEECCCCEEECCEEEEcCCCCccCccccC
Confidence 122334677788888999999999999998776654
No 66
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.25 E-value=2.4e-11 Score=120.87 Aligned_cols=130 Identities=20% Similarity=0.291 Sum_probs=88.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.+||+|||||++|+++|+.|++. |++|+|||+.+.++.... + .++.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~----g~~v~vie~~~~~gg~~~----------------~---------~~~~~~--- 50 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS----GLSYVILDAEASPGGAWQ----------------H---------AWHSLH--- 50 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS----SCCEEEECCSSSSSGGGG----------------G---------SCTTCB---
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCCCccc----------------C---------CCCCcE---
Confidence 58999999999999999999996 999999999986631100 0 000000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
+.. ......++..... ........+..+...|.+.+++.+ ++++++++|+++..
T Consensus 51 --------~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~-------------- 104 (357)
T 4a9w_A 51 --------LFS--PAGWSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKYA-LPVLRPIRVQRVSH-------------- 104 (357)
T ss_dssp --------CSS--CGGGSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHTT-CCEECSCCEEEEEE--------------
T ss_pred --------ecC--chhhhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------
Confidence 000 0000000000000 001123467889999999999887 89999999999976
Q ss_pred cccccccCCeeE-EEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAK-LDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
....+. |.+++| ++.+|.||.|+|.+|.
T Consensus 105 ------~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 105 ------FGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp ------ETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred ------CCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 445677 888888 7999999999998774
No 67
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.25 E-value=7.7e-11 Score=124.24 Aligned_cols=158 Identities=15% Similarity=0.116 Sum_probs=96.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCcEEEeC-HhHHHHHHHcC-Cch
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVT-PATISFFKEIG-AWQ 128 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~lg-l~~ 128 (515)
....+||+|||||+||+++|+.|++. |.+|+|+|+.. .++..+|. ....++. ....+.+..++ +..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~----G~kVlLIEk~~~~iG~~~c~-------ps~gGia~~~lv~el~al~g~~~ 86 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG----GLHCLLITSDLSAVARMSCN-------PAIGGVAKGQITREIDALGGEMG 86 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSSC-------SEEECHHHHHHHHHHHHHTCSHH
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC----CCcEEEEEecccccCCCccc-------cchhhhhHHHHHHHHHhcccHHH
Confidence 34569999999999999999999996 99999999985 34333331 1111111 11222222222 222
Q ss_pred hhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcc
Q 010200 129 YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (515)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~ 208 (515)
..... ..+.+....... ..........+++..+...|.+.+++..+++++. .+|+++..
T Consensus 87 ~~~d~-----~gi~f~~l~~~k-------gpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~-------- 145 (641)
T 3cp8_A 87 KAIDA-----TGIQFRMLNRSK-------GPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA-------- 145 (641)
T ss_dssp HHHHH-----HEEEEEEECSSS-------CTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE--------
T ss_pred HHHHh-----cCCchhhccccc-------CccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe--------
Confidence 11111 112221100000 0000112246889999999999998864499864 58999875
Q ss_pred cCCCCCcccccccCCeeE-EEcCCCcEEEeeEEEEecCCCchhhhh
Q 010200 209 VDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADGGKSRVREL 253 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~S~vr~~ 253 (515)
+++.+. |.+.+|.++.||.||+|+|.++..+-.
T Consensus 146 ------------d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i~ 179 (641)
T 3cp8_A 146 ------------NSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIH 179 (641)
T ss_dssp ------------ETTEEEEEEETTSCEEEEEEEEECCTTCBTCEEE
T ss_pred ------------cCCEEEEEEECCCcEEEeCEEEECcCCCCCccce
Confidence 234444 777888899999999999999875443
No 68
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.24 E-value=8.3e-11 Score=120.22 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeE-EEcCCCcEEEeeEEEEecCCCch
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
..+.+.|.+.+++.| ++|+++++|++|+. +++.++ |.+ +|+++.||.||.|.|.+..
T Consensus 196 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANG-GKIHTGQEVSKILI--------------------ENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcC-CEEEECCceeEEEE--------------------ECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 457888889999888 99999999999987 334454 655 4778999999999998876
Q ss_pred hh
Q 010200 250 VR 251 (515)
Q Consensus 250 vr 251 (515)
.+
T Consensus 254 ~~ 255 (425)
T 3ka7_A 254 AV 255 (425)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 69
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.24 E-value=8e-11 Score=114.38 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=97.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
..+||+||||||+||++|+.|++.+ +|++|+|+|+.+.++...+.. ........+.+.....|+++|+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~--~g~~V~v~e~~~~~ggg~~~~---g~~~~~~~~~~~~~~~L~~~Gv~------ 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSWLG---GQLFSAMVMRKPAHLFLQELEIP------ 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTTCC---GGGCCCEEEETTTHHHHHHTTCC------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcC--CCCeEEEEecCcccccccccc---CcccchhhhhhHHHHHHHhhCcc------
Confidence 4579999999999999999999842 289999999998775333211 11112234445566677766642
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
+. .. + .. ....+...+...|.+.+.+.++++++.+++|+++..+ .+.
T Consensus 133 ----~~-----~~-g--~~------------~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~---------~~~ 179 (326)
T 2gjc_A 133 ----YE-----DE-G--DY------------VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTR---------PPT 179 (326)
T ss_dssp ----CE-----EC-S--SE------------EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEC---------CCC
T ss_pred ----cc-----cC-C--Ce------------EEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeec---------ccc
Confidence 11 00 0 00 0112456788999999988745999999999999871 100
Q ss_pred C-cccccccCCeeEEEc------------CCCcEEEe---------------eEEEEecCCCchhhhhcC
Q 010200 214 S-ATTLFTKGHLAKLDL------------SDGTSLYA---------------KLVVGADGGKSRVRELAG 255 (515)
Q Consensus 214 ~-~~~~~~~~~~~~v~~------------~~g~~~~a---------------d~vV~AdG~~S~vr~~l~ 255 (515)
+ + .....++.+.. .++.++.| |+||+|+|..|++.+.+.
T Consensus 180 ~~g---~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 180 EKG---EVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp --------CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred cCC---CcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 0 0 00011222221 13457899 999999999999988763
No 70
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.24 E-value=3.4e-10 Score=115.60 Aligned_cols=61 Identities=13% Similarity=0.218 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
..+.+.|.+.+++.| ++|+++++|++|+. +++.+ |. .+|+++.||.||.|.|.+...
T Consensus 189 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~v-V~-~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENK-GKILTRKEVVEINI--------------------EEKKV-YT-RDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTT-CEEESSCCEEEEET--------------------TTTEE-EE-TTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCeEEEEEE--------------------ECCEE-EE-eCCcEEEeCEEEECCCHHHHH
Confidence 467788888898888 99999999999976 33456 54 567789999999999988654
Q ss_pred hhhcC
Q 010200 251 RELAG 255 (515)
Q Consensus 251 r~~l~ 255 (515)
+.++
T Consensus 246 -~ll~ 249 (421)
T 3nrn_A 246 -KLIG 249 (421)
T ss_dssp -HHHC
T ss_pred -HhcC
Confidence 4444
No 71
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.21 E-value=9.3e-11 Score=123.17 Aligned_cols=156 Identities=16% Similarity=0.188 Sum_probs=99.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCcEEEeC-HhHHHHHHHcC-Cchhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVT-PATISFFKEIG-AWQYV 130 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~lg-l~~~~ 130 (515)
..+||+|||||+||+++|+.|++. |.+|+|+|+.. ..+..+|. ....++. ....+.++.++ .+...
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~----G~kVlLIEk~~~~iG~~~Cn-------ps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM----GAKTAMFVLNADTIGQMSCN-------PAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCCSC-------SEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCCEEEEEecccccCCcCcc-------ccccccchHHHHHHHHHhhhHHHHH
Confidence 469999999999999999999996 99999999985 34433341 1111111 12233344443 22222
Q ss_pred hhhhccccceEEEE--eCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcc
Q 010200 131 QQHRHAYFDKMQVW--DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (515)
Q Consensus 131 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~ 208 (515)
... ..+.+. ...... ........+++..+...|.+.+++..+++|+ +++|+++..
T Consensus 95 ~d~-----~gi~f~~l~~~kGp---------av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-------- 151 (637)
T 2zxi_A 95 IDQ-----TGIQFKMLNTRKGK---------AVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-------- 151 (637)
T ss_dssp HHH-----HEEEEEEESTTSCG---------GGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE--------
T ss_pred hhh-----cccceeecccccCc---------cccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe--------
Confidence 221 112211 110000 0011224678899999999999885349985 679999976
Q ss_pred cCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhhhhc
Q 010200 209 VDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELA 254 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr~~l 254 (515)
+++....|.+.+|.++.||.||+|+|.++..+...
T Consensus 152 -----------e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 152 -----------KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp -----------SSSBEEEEEETTSCEEECSEEEECCTTCBTCEEEE
T ss_pred -----------cCCEEEEEEECCCcEEEeCEEEEccCCCccCceec
Confidence 12233457778888999999999999998876554
No 72
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.20 E-value=1.2e-09 Score=113.41 Aligned_cols=74 Identities=24% Similarity=0.273 Sum_probs=49.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC-CC--CCCcE-E-EeCHhHHHHHHHcCCch
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKE-DP--PDPRV-S-TVTPATISFFKEIGAWQ 128 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~-~~--~~~~~-~-~l~~~~~~~l~~lgl~~ 128 (515)
..+||+|||||++||++|+.|++. |++|+|||+...++.+...... +. ..+.. + .-.+...++++++|+.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~----g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~ 90 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR----GTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEG 90 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT----TCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC----CCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcc
Confidence 468999999999999999999996 9999999999887533210000 00 00000 1 11467788999999865
Q ss_pred hhh
Q 010200 129 YVQ 131 (515)
Q Consensus 129 ~~~ 131 (515)
.+.
T Consensus 91 ~~~ 93 (478)
T 2ivd_A 91 RIR 93 (478)
T ss_dssp GEE
T ss_pred eee
Confidence 443
No 73
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.18 E-value=6.3e-11 Score=125.53 Aligned_cols=110 Identities=13% Similarity=0.060 Sum_probs=67.1
Q ss_pred EechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe-eEEEcC---CCc--EEEeeEE
Q 010200 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLS---DGT--SLYAKLV 240 (515)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~---~g~--~~~ad~v 240 (515)
.++...+...|.+.+.+.| ++|+.+++|++++. +++. +.|.+. +|+ ++.||.|
T Consensus 184 ~v~~~~l~~~l~~~a~~~G-a~i~~~t~V~~l~~--------------------~~~~v~gV~~~d~~tg~~~~i~A~~V 242 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDG-AYLVSKMKAVGFLY--------------------EGDQIVGVKARDLLTDEVIEIKAKLV 242 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEEBSCE
T ss_pred eEchHHHHHHHHHHHHHcC-CeEEeccEEEEEEE--------------------eCCEEEEEEEEEcCCCCEEEEEcCEE
Confidence 3567788899999999988 99999999999986 2222 334432 233 7999999
Q ss_pred EEecCCCch-hhhhcCCccc-cccCCceEEEEEEEeecC-C-ceEEEEe--cCCCcEEEEecC
Q 010200 241 VGADGGKSR-VRELAGFKTT-GWSYSQNAIICTVEHNKE-N-YCAWQRF--LPAGPIALLPIG 297 (515)
Q Consensus 241 V~AdG~~S~-vr~~l~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~~~~~--~~~g~~~~~p~~ 297 (515)
|.|+|.||. +++..+.... ..-.........++.... . ...+... .++..++++|..
T Consensus 243 V~AaG~ws~~l~~~~g~~~~~~~i~p~rG~~l~~~~~~~~~~~~~~~~~~~~dgr~~~~~P~~ 305 (571)
T 2rgh_A 243 INTSGPWVDKVRNLNFTRPVSPKMRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRMVFAIPRE 305 (571)
T ss_dssp EECCGGGHHHHHTTCCSSCCCCCBCCEEEEEEEEEGGGSCCSSCEEEECSSSSSCEEEEEEET
T ss_pred EECCChhHHHHHHhhccCccCceeeccceEEEEeccccCCCCcEEEEeccCCCCcEEEEEEcC
Confidence 999999984 5555443321 122333444444443221 1 1222211 123456788875
No 74
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.17 E-value=1.2e-10 Score=113.43 Aligned_cols=115 Identities=18% Similarity=0.173 Sum_probs=76.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
.|++|||+||||||||+++|+.|+|. |++|+|||++... | . +.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~----g~~v~lie~~~~g---------------g-~-----------------~~ 45 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRA----RKQIALFDNNTNR---------------N-R-----------------VT 45 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSCCG---------------G-G-----------------GS
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCC---------------C-e-----------------ee
Confidence 45789999999999999999999996 9999999987522 1 0 00
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
. .+ . + +. .. -.+...++.....+.+.+.+.+.++. ..++.+..
T Consensus 46 ~-~~---~--------~-----~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------- 88 (304)
T 4fk1_A 46 Q-NS---H--------G-----FI-----TR---DGIKPEEFKEIGLNEVMKYPSVHYYE-KTVVMITK----------- 88 (304)
T ss_dssp S-CB---C--------C-----ST-----TC---TTBCHHHHHHHHHHHHTTSTTEEEEE-CCEEEEEE-----------
T ss_pred e-ec---C--------C-----cc-----CC---CCCCHHHHHHHHHHHHHhcCCEEEEe-eEEEEeee-----------
Confidence 0 00 0 0 00 00 01334566677777777777555554 45666544
Q ss_pred CCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCc
Q 010200 212 TPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S 248 (515)
......++...+|+++.+|.||.|+|+..
T Consensus 89 --------~~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 89 --------QSTGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp --------CTTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred --------cCCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 12345678888999999999999999853
No 75
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.16 E-value=1e-10 Score=122.94 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=91.2
Q ss_pred CCccEEEECCCHHHHHHHHHHh-cCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLA-SMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~-~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
.++||+|||||++|+++|+.|+ +. |++|+|||+.+.++.. | .....-|+...+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~----G~~v~viE~~~~~GGt-w-------------------~~~~ypg~~~d~~s 62 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL----GLTTVGFDKADGPGGT-W-------------------YWNRYPGALSDTES 62 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT----CCCEEEEESSSSSCTH-H-------------------HHCCCTTCEEEEEG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC----CCCEEEEECCCCCCCc-c-------------------cccCCCCceecCCc
Confidence 4689999999999999999999 75 8999999998866310 0 00000000000000
Q ss_pred hhccccceEEEEeCCCccceeeecc-cCCCCcceEEechHHHHHHHHHHHhcCCCc--eEEcCCeeEEEEeCCCCCCccc
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNAR-DVNKEILGCVVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISV 209 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v--~i~~~~~v~~i~~~~~~~~~~~ 209 (515)
..+ . ..+... ............+.++..+|.+.+++.+ + +++++++|++++.
T Consensus 63 ~~~-~--------------~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g-~~~~i~~~~~V~~i~~--------- 117 (540)
T 3gwf_A 63 HLY-R--------------FSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFD-LRRHFKFGTEVTSALY--------- 117 (540)
T ss_dssp GGS-S--------------CCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTT-CGGGEEESCCEEEEEE---------
T ss_pred cee-e--------------eccccccccCCCCcccCCCHHHHHHHHHHHHHHcC-CcceeEeccEEEEEEE---------
Confidence 000 0 000000 0000011124678899999999998887 6 8999999999987
Q ss_pred CCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 210 DSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
+++...++|++++|+++.||+||.|+|.+|.-
T Consensus 118 ---------~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 118 ---------LDDENLWEVTTDHGEVYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp ---------ETTTTEEEEEETTSCEEEEEEEEECCCSCCSB
T ss_pred ---------eCCCCEEEEEEcCCCEEEeCEEEECCcccccC
Confidence 11335789999999999999999999987754
No 76
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.14 E-value=1.8e-10 Score=118.67 Aligned_cols=165 Identities=10% Similarity=0.046 Sum_probs=89.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchh--
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY-- 129 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~-- 129 (515)
..+||+||||||+||++|+.|++. |+ +|+|||+.+.++..... ..... ....+.... ..+..-.+...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~----G~~~~V~v~E~~~~~GG~~~~-~~~~~--~~~~ip~~~-~~~~~~~~~~g~~ 76 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE----KAFDQVTLFERRGSPGGVWNY-TSTLS--NKLPVPSTN-PILTTEPIVGPAA 76 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT----TCCSEEEEECSSSSSSTTCSC-CSCCC--SCCCSSBCC-TTCCCCCBCCSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc----CCCCCeEEEecCCCCCCeecC-CCCCC--ccccccccc-ccccccccccccc
Confidence 468999999999999999999996 88 99999998766421110 00000 000000000 00000000000
Q ss_pred hhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCccc
Q 010200 130 VQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISV 209 (515)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~ 209 (515)
+..........+. .........+........ ......+..+.++|.+.+.+.+ ..++++++|++++.
T Consensus 77 ~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~-~~i~~~t~V~~v~~--------- 143 (447)
T 2gv8_A 77 LPVYPSPLYRDLQ--TNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPLL-PFIKLATDVLDIEK--------- 143 (447)
T ss_dssp CCBCCCCCCTTCB--CSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGGG-GGEECSEEEEEEEE---------
T ss_pred cCCccCchhhhhc--cCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhh-CeEEeCCEEEEEEe---------
Confidence 0000000000000 000000000000000000 1123568899999999988876 78999999999976
Q ss_pred CCCCCcccccccCCeeEEEcCC---Cc---EEEeeEEEEecCCCchh
Q 010200 210 DSTPSATTLFTKGHLAKLDLSD---GT---SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~~~---g~---~~~ad~vV~AdG~~S~v 250 (515)
..+.++|++.+ |+ ++.+|.||+|+|.+|.-
T Consensus 144 -----------~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 144 -----------KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp -----------ETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred -----------CCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 33456776655 66 79999999999998754
No 77
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.13 E-value=2.9e-10 Score=118.98 Aligned_cols=40 Identities=28% Similarity=0.414 Sum_probs=36.3
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
+.++||||||||++||++|+.|++. |++|+|+||.+.++.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~----G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARA----GADVLVLERTSGWGG 78 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCCCC
Confidence 4679999999999999999999996 999999999987753
No 78
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.13 E-value=1.7e-10 Score=114.83 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=42.8
Q ss_pred eEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEec
Q 010200 165 GCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 244 (515)
Q Consensus 165 ~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~Ad 244 (515)
+..++...+...|.+.+++.| ++|+. ++|++++. .. .+.||.||.|+
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G-v~i~~-~~V~~i~~--------------------~~-----------~~~a~~VV~A~ 182 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERG-VKFFQ-RKVESFEE--------------------VA-----------REGADVIVNCT 182 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTT-CEEEE-CCCCCHHH--------------------HH-----------HTTCSEEEECC
T ss_pred ceEEcHHHHHHHHHHHHHHCC-CEEEE-EEeCCHHH--------------------hh-----------cCCCCEEEECC
Confidence 356889999999999999998 89988 88888753 10 15699999999
Q ss_pred CCCch
Q 010200 245 GGKSR 249 (515)
Q Consensus 245 G~~S~ 249 (515)
|.+|.
T Consensus 183 G~~s~ 187 (351)
T 3g3e_A 183 GVWAG 187 (351)
T ss_dssp GGGGG
T ss_pred CcChH
Confidence 99985
No 79
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.13 E-value=1.3e-10 Score=113.56 Aligned_cols=115 Identities=17% Similarity=0.216 Sum_probs=83.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
+||+||||||+|+++|+.|++. |+ +|+|||+.. ++ ..| .. ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~----g~~~v~lie~~~-~g-g~~-------------~~-----------------~~- 44 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG----GVKNAVLFEKGM-PG-GQI-------------TG-----------------SS- 44 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT----TCSSEEEECSSS-TT-CGG-------------GG-----------------CS-
T ss_pred ceEEEECccHHHHHHHHHHHHC----CCCcEEEEcCCC-CC-ccc-------------cc-----------------cc-
Confidence 7999999999999999999996 89 999999953 21 000 00 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
... .++ . ....+++..+...|.+.+.+.+ ++++. ++|+++..
T Consensus 45 --~~~-------------~~~--~-----~~~~~~~~~~~~~l~~~~~~~~-v~~~~-~~v~~i~~-------------- 86 (311)
T 2q0l_A 45 --EIE-------------NYP--G-----VKEVVSGLDFMQPWQEQCFRFG-LKHEM-TAVQRVSK-------------- 86 (311)
T ss_dssp --CBC-------------CST--T-----CCSCBCHHHHHHHHHHHHHTTS-CEEEC-SCEEEEEE--------------
T ss_pred --ccc-------------cCC--C-----CcccCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEE--------------
Confidence 000 000 0 0013567888999999998887 89988 79999976
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVR 251 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr 251 (515)
....+++.+.+|.++.+|.||+|+|.++.+.
T Consensus 87 ------~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 87 ------KDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ------ETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred ------cCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 3345777778888999999999999877654
No 80
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.12 E-value=1.6e-10 Score=121.84 Aligned_cols=142 Identities=17% Similarity=0.189 Sum_probs=88.9
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
+.++||+|||||++|+++|+.|++. |++|+|||+.+.++.. |... ..+ ++.-....
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~----G~~v~iiE~~~~~GG~-w~~~-~~p------------------g~~~d~~~ 69 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL----GRSVHVIETAGDVGGV-WYWN-RYP------------------GARCDIES 69 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTH-HHHC-CCT------------------TCBCSSCT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC----CCCEEEEeCCCCCCCc-cccc-CCC------------------ceeecccc
Confidence 3468999999999999999999996 8999999999876310 0000 000 00000000
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCC-CceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g-~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
..+ ...+ .......+. .......+.++.++|.+.+++.+ ..+++++++|++++.
T Consensus 70 ~~~----~~~f---~~~~~~~~~-------~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~----------- 124 (542)
T 1w4x_A 70 IEY----CYSF---SEEVLQEWN-------WTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAF----------- 124 (542)
T ss_dssp TTS----SCCS---CHHHHHHCC-------CCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEE-----------
T ss_pred ccc----cccc---ChhhhhccC-------cccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEE-----------
Confidence 000 0000 000000000 00012457788888888777664 267999999999986
Q ss_pred CCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 212 TPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
+++...++|++++|+++.||+||+|+|.+|.-
T Consensus 125 -------~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 125 -------DEATNTWTVDTNHGDRIRARYLIMASGQLSVP 156 (542)
T ss_dssp -------ETTTTEEEEEETTCCEEEEEEEEECCCSCCCC
T ss_pred -------cCCCCeEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 11235688888899899999999999998754
No 81
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.12 E-value=5.7e-10 Score=114.22 Aligned_cols=36 Identities=36% Similarity=0.646 Sum_probs=33.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
+||||||||++|+++|+.|++. |++|+|||+++.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~----G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA----GKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT----TCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHc----CCeEEEEecCCCcc
Confidence 7999999999999999999996 99999999987764
No 82
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.12 E-value=8.8e-11 Score=115.84 Aligned_cols=120 Identities=14% Similarity=0.104 Sum_probs=82.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
..+||+||||||+|+++|+.|++. |++|+|||+...... ...+. +..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~----g~~v~lie~~~~~~~--------~~gg~--------------------~~~- 53 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA----ELKPLLFEGWMANDI--------APGGQ--------------------LTT- 53 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSBTTB--------CTTCG--------------------GGG-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeccCcccc--------CCCce--------------------eee-
Confidence 458999999999999999999996 999999998211100 00000 000
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
...+ .. ++ . .. ..+.+..+...|.+.+.+.+ ++++.++ |+++..
T Consensus 54 ----~~~~--~~--------~~--~---~~--~~~~~~~~~~~l~~~~~~~g-v~~~~~~-v~~i~~------------- 97 (333)
T 1vdc_A 54 ----TTDV--EN--------FP--G---FP--EGILGVELTDKFRKQSERFG-TTIFTET-VTKVDF------------- 97 (333)
T ss_dssp ----CSEE--CC--------ST--T---CT--TCEEHHHHHHHHHHHHHHTT-CEEECCC-CCEEEC-------------
T ss_pred ----cccc--cc--------CC--C---Cc--cCCCHHHHHHHHHHHHHHCC-CEEEEeE-EEEEEE-------------
Confidence 0000 00 00 0 00 12567788899999888887 9999986 888865
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
....+++.+ +|.++.+|.||+|+|.++..
T Consensus 98 -------~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 98 -------SSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp -------SSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred -------cCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 334577777 77789999999999998654
No 83
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.11 E-value=2.2e-10 Score=112.71 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=81.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
...+||+||||||+|+++|+.|++. |++|+|||+. .++. .| . .
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~-~~gg-~~--------------~-----------------~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA----QLSTLILEKG-MPGG-QI--------------A-----------------W 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESS-CTTG-GG--------------G-----------------G
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc----CCcEEEEeCC-CCCc-cc--------------c-----------------c
Confidence 3468999999999999999999996 8999999998 3310 00 0 0
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
. . ... .++ ... ..+.+..+...|.+.+++.+ ++++. .+|+++.. +.
T Consensus 49 ~-~-~~~-------------~~~--~~~-----~~~~~~~~~~~l~~~~~~~g-v~~~~-~~v~~i~~---------~~- 94 (325)
T 2q7v_A 49 S-E-EVE-------------NFP--GFP-----EPIAGMELAQRMHQQAEKFG-AKVEM-DEVQGVQH---------DA- 94 (325)
T ss_dssp C-S-CBC-------------CST--TCS-----SCBCHHHHHHHHHHHHHHTT-CEEEE-CCEEEEEE---------CT-
T ss_pred c-c-ccc-------------cCC--CCC-----CCCCHHHHHHHHHHHHHHcC-CEEEe-eeEEEEEe---------cc-
Confidence 0 0 000 000 000 12456788888998888887 89887 58998876 00
Q ss_pred CCcccccccCC-eeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 213 PSATTLFTKGH-LAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 213 ~~~~~~~~~~~-~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
.+. .+++...+|.++.+|.||.|+|.++..
T Consensus 95 --------~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 95 --------TSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp --------TSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred --------CCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 012 266666788889999999999986543
No 84
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.11 E-value=1.9e-10 Score=113.56 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=84.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
..+.+||+|||||++||++|+.|++. |++|+|||+.+.... ... | .+.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~vie~~~~~~~--------~~g--g---------------~~~--- 66 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA----EIKPILYEGMMANGI--------AAG--G---------------QLT--- 66 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSBTTB--------CTT--C---------------GGG---
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEecCCCCCC--------CcC--c---------------ccc---
Confidence 34568999999999999999999996 999999999762100 000 0 000
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
. ... +. .++ .. ...+.+..+...|.+.+.+.+ +++++++ |+++..
T Consensus 67 ~-----~~~--~~--------~~~-----~~--~~~~~~~~~~~~~~~~~~~~g-v~i~~~~-v~~i~~----------- 111 (338)
T 3itj_A 67 T-----TTE--IE--------NFP-----GF--PDGLTGSELMDRMREQSTKFG-TEIITET-VSKVDL----------- 111 (338)
T ss_dssp G-----SSE--EC--------CST-----TC--TTCEEHHHHHHHHHHHHHHTT-CEEECSC-EEEEEC-----------
T ss_pred c-----chh--hc--------ccC-----CC--cccCCHHHHHHHHHHHHHHcC-CEEEEeE-EEEEEE-----------
Confidence 0 000 00 000 00 012567889999999999987 9999997 999875
Q ss_pred CCCcccccccCCeeEEEc---CCCcEEEeeEEEEecCCCchh
Q 010200 212 TPSATTLFTKGHLAKLDL---SDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~---~~g~~~~ad~vV~AdG~~S~v 250 (515)
....+.+.+ .++.++.+|.||.|+|..+..
T Consensus 112 ---------~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 112 ---------SSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp ---------SSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred ---------cCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 345577776 366789999999999996543
No 85
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.11 E-value=9e-11 Score=123.61 Aligned_cols=140 Identities=19% Similarity=0.226 Sum_probs=90.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
...+||+|||||++|+++|+.|++. |++|+|||+.+.++.. | ..-..-|+..++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~----G~~v~iiE~~~~~GGt-w-------------------~~~~ypg~~~dv~s 74 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ----GLTVRAFEAASGVGGV-W-------------------YWNRYPGARCDVES 74 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTH-H-------------------HHCCCTTCBCSSCT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC----CCCEEEEeCCCCCCCc-c-------------------ccCCCCCceeCCCc
Confidence 3568999999999999999999996 8999999998866310 0 00000011000000
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCc--eEEcCCeeEEEEeCCCCCCcccC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVD 210 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v--~i~~~~~v~~i~~~~~~~~~~~~ 210 (515)
..+ ... ... .. .. ..........+.++..+|.+.+++.+ + +++++++|+++..
T Consensus 75 ~~y-~~~------f~~--~~-~~----~~~~~~~~~~~~ei~~yl~~~~~~~g-~~~~i~~~~~V~~i~~---------- 129 (549)
T 4ap3_A 75 IDY-SYS------FSP--EL-EQ----EWNWSEKYATQPEILAYLEHVADRFD-LRRDIRFDTRVTSAVL---------- 129 (549)
T ss_dssp TTS-SCC------SCH--HH-HH----HCCCSSSSCBHHHHHHHHHHHHHHTT-CGGGEECSCCEEEEEE----------
T ss_pred hhc-ccc------ccc--cc-cc----CCCCccCCCCHHHHHHHHHHHHHHcC-CCccEEECCEEEEEEE----------
Confidence 000 000 000 00 00 00000123567889999999998887 5 8999999999987
Q ss_pred CCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 211 STPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
++....++|++++|+++.||+||.|+|..|.
T Consensus 130 --------~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 130 --------DEEGLRWTVRTDRGDEVSARFLVVAAGPLSN 160 (549)
T ss_dssp --------ETTTTEEEEEETTCCEEEEEEEEECCCSEEE
T ss_pred --------cCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 1233578999999999999999999997664
No 86
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.10 E-value=3.5e-10 Score=109.35 Aligned_cols=114 Identities=13% Similarity=0.138 Sum_probs=83.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.+||+||||||+|+++|+.|++. |++|+|||+......
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~~~-------------------------------------- 39 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA----RKNILLVDAGERRNR-------------------------------------- 39 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCCCGGG--------------------------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCcccc--------------------------------------
Confidence 38999999999999999999996 899999998763310
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
.... . ..++ .. .......+...+.+.+.+.++++++. .+|+++..
T Consensus 40 ~~~~---------~---~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~-------------- 84 (297)
T 3fbs_A 40 FASH---------S---HGFL-----GQ---DGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKG-------------- 84 (297)
T ss_dssp GCSC---------C---CSST-----TC---TTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEE--------------
T ss_pred cchh---------h---cCCc-----CC---CCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEE--------------
Confidence 0000 0 0000 00 02446788889999998875577765 49999976
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchhh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVR 251 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~vr 251 (515)
....+.+.+.+|+++.+|.||.|+|..+...
T Consensus 85 ------~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 85 ------SFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp ------ETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred ------cCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 3356888888998999999999999976543
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.10 E-value=5.7e-10 Score=109.22 Aligned_cols=113 Identities=19% Similarity=0.186 Sum_probs=83.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
+.+||+|||||++|+++|+.|++. |++|+|||+. ++.. + ..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~--~gg~-~--------------~~------------------ 54 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY----MLKTLVIGET--PGGQ-L--------------TE------------------ 54 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESS--TTGG-G--------------GG------------------
T ss_pred CccCEEEECccHHHHHHHHHHHHC----CCcEEEEecc--CCCe-e--------------cc------------------
Confidence 358999999999999999999996 8999999998 3100 0 00
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
. . ..+ .++ ... .+....+...|.+.+.+.+ +++++ ++|+++..
T Consensus 55 -~---~--~~~--------~~~-----~~~---~~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~------------- 97 (323)
T 3f8d_A 55 -A---G--IVD--------DYL-----GLI---EIQASDMIKVFNKHIEKYE-VPVLL-DIVEKIEN------------- 97 (323)
T ss_dssp -C---C--EEC--------CST-----TST---TEEHHHHHHHHHHHHHTTT-CCEEE-SCEEEEEE-------------
T ss_pred -c---c--ccc--------ccC-----CCC---CCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEe-------------
Confidence 0 0 000 000 000 1556788899999999887 89998 89999976
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
....+.+..++|.++.+|.||.|+|....
T Consensus 98 -------~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 98 -------RGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp -------C--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred -------cCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 34567888888889999999999999843
No 88
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.10 E-value=4.4e-10 Score=119.20 Aligned_cols=68 Identities=18% Similarity=0.021 Sum_probs=49.8
Q ss_pred chHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCc--EEEeeEEEEecCC
Q 010200 169 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGG 246 (515)
Q Consensus 169 ~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~ad~vV~AdG~ 246 (515)
....+...|.+.+++.| ++|+++++|+++..+ +++ ...++.+...+|+ ++.+|.||+|+|.
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~t~v~~l~~~-----------~~g-----~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRG-TDIRLNSRVVRILED-----------ASG-----KVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEEC-------------C-----CEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcC-CeEEecCEEEEEEEC-----------CCC-----eEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 35688999999999988 999999999999761 000 1113444433664 6899999999999
Q ss_pred Cchhhhh
Q 010200 247 KSRVREL 253 (515)
Q Consensus 247 ~S~vr~~ 253 (515)
+|..++.
T Consensus 316 ~~~~~~~ 322 (572)
T 1d4d_A 316 FAKNNER 322 (572)
T ss_dssp CTTCHHH
T ss_pred CccCHHH
Confidence 9976443
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.08 E-value=2.5e-10 Score=120.14 Aligned_cols=141 Identities=13% Similarity=0.156 Sum_probs=90.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
+..+||+|||||++|+++|+.|++. |++|+|||+.+.++.. |.. ...+ +. . +.....+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~----g~~v~iiE~~~~~GGt-w~~-~~yP-g~--~-----------~d~~~~~y~ 66 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA----GMKVLGIEAGEDVGGT-WYW-NRYP-GC--R-----------LDTESYAYG 66 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTH-HHH-CCCT-TC--B-----------CSSCHHHHC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC----CCCEEEEeCCCCCCCc-ccc-CCCC-ce--e-----------ecCchhhcc
Confidence 3468999999999999999999996 8999999999876311 000 0000 00 0 000000000
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCc--eEEcCCeeEEEEeCCCCCCcccC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVD 210 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v--~i~~~~~v~~i~~~~~~~~~~~~ 210 (515)
... ...... ..........+.++..+|.+.+++.+ + .++++++|++++.
T Consensus 67 ~~f---------~~~~~~---------~~~~~~~~~~~~ei~~yl~~~~~~~~-l~~~i~~~~~V~~~~~---------- 117 (545)
T 3uox_A 67 YFA---------LKGIIP---------EWEWSENFASQPEMLRYVNRAADAMD-VRKHYRFNTRVTAARY---------- 117 (545)
T ss_dssp HHH---------HTTSST---------TCCCSBSSCBHHHHHHHHHHHHHHHT-CGGGEECSCCEEEEEE----------
T ss_pred ccc---------Cccccc---------CCCccccCCCHHHHHHHHHHHHHHcC-CcCcEEECCEEEEEEE----------
Confidence 000 000000 00001123567888888888888776 5 7999999999986
Q ss_pred CCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 211 STPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
++....++|++++|+++.||+||.|+|..|.-
T Consensus 118 --------~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 118 --------VENDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp --------EGGGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred --------eCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 12345789999999899999999999987653
No 90
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.07 E-value=3.2e-10 Score=125.73 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=55.0
Q ss_pred EEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCe-eEEEcCCCcEEEeeEEEEec
Q 010200 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGAD 244 (515)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~~~ad~vV~Ad 244 (515)
..++...+...|.+.+++.| ++|+.+++|++++. .++. +.|.+.+| ++.||.||.|+
T Consensus 146 g~v~p~~l~~~L~~~a~~~G-v~i~~~t~V~~i~~--------------------~~~~v~~V~t~~G-~i~Ad~VV~Aa 203 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAG-VTYRGSTTVTGIEQ--------------------SGGRVTGVQTADG-VIPADIVVSCA 203 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTE-EEECSEEEECC
T ss_pred ceEcHHHHHHHHHHHHHHcC-CEEECCceEEEEEE--------------------eCCEEEEEEECCc-EEECCEEEECC
Confidence 45688899999999999998 99999999999976 2233 35777777 79999999999
Q ss_pred CCCchh-hhhcCC
Q 010200 245 GGKSRV-RELAGF 256 (515)
Q Consensus 245 G~~S~v-r~~l~~ 256 (515)
|.+|.. .+.++.
T Consensus 204 G~~s~~l~~~~g~ 216 (830)
T 1pj5_A 204 GFWGAKIGAMIGM 216 (830)
T ss_dssp GGGHHHHHHTTTC
T ss_pred ccchHHHHHHhCC
Confidence 999964 333443
No 91
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.06 E-value=4.3e-10 Score=110.63 Aligned_cols=118 Identities=26% Similarity=0.299 Sum_probs=85.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.+||+|||||++|+++|+.|++. |++|+|||+.+.++ | .+. . .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~g--------------G------~~~---------~----~ 49 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR----QASVKIIESLPQLG--------------G------QLS---------A----L 49 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC--------------H------HHH---------H----H
T ss_pred cceEEEECCCHHHHHHHHHHHHC----CCCEEEEEcCCCCC--------------c------eeh---------h----c
Confidence 48999999999999999999996 99999999998651 0 000 0 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. +... +++..+ . ..+.+..+...|.+.+.+.+ ++++++++|+++..
T Consensus 50 ~-~~~~--~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~-------------- 95 (332)
T 3lzw_A 50 Y-PEKY--IYDVAG-------------F---PKIRAQELINNLKEQMAKFD-QTICLEQAVESVEK-------------- 95 (332)
T ss_dssp C-TTSE--ECCSTT-------------C---SSEEHHHHHHHHHHHHTTSC-CEEECSCCEEEEEE--------------
T ss_pred C-CCce--EeccCC-------------C---CCCCHHHHHHHHHHHHHHhC-CcEEccCEEEEEEE--------------
Confidence 0 0000 000000 0 01457889999999999887 99999999999976
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
+....+.+.+.+|+ +.+|.||.|+|.++.
T Consensus 96 -----~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 96 -----QADGVFKLVTNEET-HYSKTVIITAGNGAF 124 (332)
T ss_dssp -----CTTSCEEEEESSEE-EEEEEEEECCTTSCC
T ss_pred -----CCCCcEEEEECCCE-EEeCEEEECCCCCcC
Confidence 11236788888886 999999999999654
No 92
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.05 E-value=7.1e-10 Score=108.66 Aligned_cols=116 Identities=19% Similarity=0.220 Sum_probs=80.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
+...+||+||||||+|+++|+.|++. |++|+|||+.. ++. .+ . .
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~-~gg-~~--------------~-----------~----- 56 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS----GFSVAILDKAV-AGG-LT--------------A-----------E----- 56 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS-TTG-GG--------------G-----------G-----
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCC-CCc-cc--------------c-----------c-----
Confidence 44568999999999999999999996 89999999943 210 00 0 0
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
. . ... .++ .. ..+.+..+...+.+.+.+.+ +++++ .+|+++..
T Consensus 57 ~--~-~~~-------------~~~--~~------~~~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~----------- 99 (319)
T 3cty_A 57 A--P-LVE-------------NYL--GF------KSIVGSELAKLFADHAANYA-KIREG-VEVRSIKK----------- 99 (319)
T ss_dssp C--S-CBC-------------CBT--TB------SSBCHHHHHHHHHHHHHTTS-EEEET-CCEEEEEE-----------
T ss_pred c--c-hhh-------------hcC--CC------cccCHHHHHHHHHHHHHHcC-CEEEE-eeEEEEEE-----------
Confidence 0 0 000 000 00 02455678888888888887 89988 68999875
Q ss_pred CCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 212 TPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
....+++.. ++.++.+|.||+|+|.++..
T Consensus 100 ---------~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 100 ---------TQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp ---------ETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred ---------eCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 334466666 56689999999999986543
No 93
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.05 E-value=6.3e-10 Score=111.31 Aligned_cols=141 Identities=16% Similarity=0.257 Sum_probs=84.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
+++||+|||||++|+++|+.|++. |+ +|+|||+.+ ++. .|... .... ..+.+ ....
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~----g~~~v~lie~~~-~Gg-~~~~~--~~~~--~~~~~-------------~~~~ 59 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDF----GITDVIILEKGT-VGH-SFKHW--PKST--RTITP-------------SFTS 59 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSS-TTH-HHHTS--CTTC--BCSSC-------------CCCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHc----CCCcEEEEecCC-CCC-ccccC--cccc--cccCc-------------chhc
Confidence 358999999999999999999996 88 999999987 421 00000 0000 00000 0000
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
... .+. +.........+. . ......+.+..+..+|.+.+++.| ++++++++|+++..
T Consensus 60 ~~~-g~~-----~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l~~~~~~~g-v~i~~~~~v~~i~~------------ 116 (369)
T 3d1c_A 60 NGF-GMP-----DMNAISMDTSPA--F--TFNEEHISGETYAEYLQVVANHYE-LNIFENTVVTNISA------------ 116 (369)
T ss_dssp GGG-TCC-----CTTCSSTTCCHH--H--HHCCSSCBHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE------------
T ss_pred ccC-Cch-----hhhhcccccccc--c--cccccCCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEE------------
Confidence 000 000 000000000000 0 000012456778888888888887 99999999999976
Q ss_pred CCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 213 PSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.++.+.|...++ ++.+|.||.|+|.++.
T Consensus 117 --------~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 117 --------DDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp --------CSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred --------CCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 234577777777 5999999999999864
No 94
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.05 E-value=5.4e-10 Score=110.37 Aligned_cols=117 Identities=19% Similarity=0.207 Sum_probs=81.0
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhh
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (515)
++..+||+||||||+|+++|+.|++. |++|+|||+.. ++ +. + .
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~-~g--------------g~-~-----------------~ 53 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA----QLAPLVFEGTS-FG--------------GA-L-----------------M 53 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT----TCCCEEECCSS-CS--------------CG-G-----------------G
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEecCC-CC--------------Cc-e-----------------e
Confidence 34568999999999999999999996 99999999752 21 00 0 0
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
. .. ... .++ . ....+.+..+...|.+.+.+.+ ++++.++ |+++..
T Consensus 54 ~-~~-~~~-------------~~~--~-----~~~~~~~~~~~~~l~~~~~~~~-v~~~~~~-v~~i~~----------- 98 (335)
T 2a87_A 54 T-TT-DVE-------------NYP--G-----FRNGITGPELMDEMREQALRFG-ADLRMED-VESVSL----------- 98 (335)
T ss_dssp S-CS-CBC-------------CST--T-----CTTCBCHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC-----------
T ss_pred c-cc-hhh-------------hcC--C-----CCCCCCHHHHHHHHHHHHHHcC-CEEEEee-EEEEEe-----------
Confidence 0 00 000 000 0 0012456788888888888887 9999986 888753
Q ss_pred CCCcccccccCCeeEE-EcCCCcEEEeeEEEEecCCCchh
Q 010200 212 TPSATTLFTKGHLAKL-DLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v-~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
...+++ .+++|+++.+|.||+|+|.++..
T Consensus 99 ----------~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 99 ----------HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp ----------SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred ----------CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 133566 67788889999999999987643
No 95
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.04 E-value=8.4e-10 Score=117.43 Aligned_cols=66 Identities=20% Similarity=0.186 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCC--eeEEE-cCCCc--EEEeeEEEEec
Q 010200 170 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLD-LSDGT--SLYAKLVVGAD 244 (515)
Q Consensus 170 r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~-~~~g~--~~~ad~vV~Ad 244 (515)
...+...|.+.+.+.|+++|+++++|+++.. +++. ++.+. ..+|+ ++.++.||+|+
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-------------------DDGHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-------------------ETTEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-------------------eCCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 3578899999998887799999999999976 1111 23332 36676 79999999999
Q ss_pred CCCchhhhhc
Q 010200 245 GGKSRVRELA 254 (515)
Q Consensus 245 G~~S~vr~~l 254 (515)
|.+|.++...
T Consensus 194 Gg~s~~~~~~ 203 (602)
T 1kf6_A 194 GGAGRVYRYN 203 (602)
T ss_dssp CCCGGGSSSB
T ss_pred CCCcccccCc
Confidence 9999987654
No 96
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.02 E-value=7.3e-10 Score=108.05 Aligned_cols=117 Identities=21% Similarity=0.251 Sum_probs=82.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
++||+||||||+|+++|+.|++. |++|+|+|+.... .| . .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~----g~~v~li~~~~gG---~~------~-------------------------~-- 40 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK----GIRTGLMGERFGG---QI------L-------------------------D-- 40 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSTTG---GG------G-------------------------G--
T ss_pred CCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCc---ee------c-------------------------c--
Confidence 37999999999999999999996 9999999864210 00 0 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. ..+ . .+. .. ....+..+...|.+.+.+.+ ++++.+++|+.+.. +.+
T Consensus 41 --~-~~~--~--------~~~-----~~---~~~~~~~~~~~~~~~~~~~~-v~~~~~~~v~~i~~---------~~~-- 87 (310)
T 1fl2_A 41 --T-VDI--E--------NYI-----SV---PKTEGQKLAGALKVHVDEYD-VDVIDSQSASKLIP---------AAV-- 87 (310)
T ss_dssp --C-CEE--C--------CBT-----TB---SSEEHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CSS--
T ss_pred --c-ccc--c--------ccc-----Cc---CCCCHHHHHHHHHHHHHHcC-CeEEccCEEEEEEe---------ccc--
Confidence 0 000 0 000 00 01356778888888888887 99999999999965 100
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
.+..+.+.+++|+++.+|.||.|+|.++..
T Consensus 88 ------~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 88 ------EGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ------TTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred ------CCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 123578888888889999999999987643
No 97
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.02 E-value=4.6e-10 Score=109.97 Aligned_cols=115 Identities=15% Similarity=0.211 Sum_probs=79.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
+.+||+||||||+|+++|+.|++. |++|+|||+.. ++ +. + ...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~-~g--------------g~-~----------------~~~- 46 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA----NLQPVLITGME-KG--------------GQ-L----------------TTT- 46 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT----TCCCEEECCSS-TT--------------GG-G----------------GGC-
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCcEEEEccCC-CC--------------ce-E----------------ecc-
Confidence 468999999999999999999996 89999999652 21 00 0 000
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
. ... .++ . ....+.+..+...+.+.+.+.+ ++++.++ |+.+..
T Consensus 47 -~-~~~-------------~~~--~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-v~~i~~------------- 89 (320)
T 1trb_A 47 -T-EVE-------------NWP--G-----DPNDLTGPLLMERMHEHATKFE-TEIIFDH-INKVDL------------- 89 (320)
T ss_dssp -S-BCC-------------CST--T-----CCSSCBHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC-------------
T ss_pred -h-hhh-------------hCC--C-----CCCCCCHHHHHHHHHHHHHHCC-CEEEEee-eeEEEe-------------
Confidence 0 000 000 0 0012456778888888888887 8999985 888865
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
....+++ ..++.++.+|.||.|+|.++..
T Consensus 90 -------~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 90 -------QNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp -------SSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred -------cCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 3345666 5677789999999999987543
No 98
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.01 E-value=1.1e-09 Score=115.27 Aligned_cols=38 Identities=29% Similarity=0.576 Sum_probs=34.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
..++||+|||||++||++|+.|++ |.+|+|+||.+..+
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-----G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-----QHQVIVLSKGPVTE 43 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-----TSCEEEECSSCTTC
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-----CCcEEEEECCCCCC
Confidence 346899999999999999999998 68999999998654
No 99
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.01 E-value=5.2e-10 Score=115.58 Aligned_cols=151 Identities=13% Similarity=0.109 Sum_probs=87.0
Q ss_pred ccEEEECCCHHHHHHHHHHhc---CCCCCCcE---EEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchh
Q 010200 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLS---VAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY 129 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~---V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~ 129 (515)
+||+||||||+|+++|..|++ . |++ |+|||+.+.++........ . +..+ +|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~----G~~~~~V~v~E~~~~~GG~w~~~~~---~----g~~~--------~g~~-- 61 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK----GAEIPELVCFEKQADWGGQWNYTWR---T----GLDE--------NGEP-- 61 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT----TCCCCEEEEECSSSSSCGGGSCCSC---C----SBCT--------TSSB--
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc----CCCCCcEEEEEcCCCCCCEeecCCC---C----Cccc--------cCCC--
Confidence 699999999999999999998 7 888 9999999876321110000 0 0000 0100
Q ss_pred hhhhhccccceEEEEeCCCcccee---eecccCCCCcceEEechHHHHHHHHHHHhcCCCce--EEcCCeeEEEEeCCCC
Q 010200 130 VQQHRHAYFDKMQVWDYTGLGYTK---YNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQK--TIYPSRLTSMALLPSS 204 (515)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~--i~~~~~v~~i~~~~~~ 204 (515)
+... ....+. ......... ++............+++..+.++|.+.+++.+ ++ ++++++|+.++..
T Consensus 62 ~~~~---~y~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g-v~~~i~~~~~V~~v~~~--- 132 (464)
T 2xve_A 62 VHSS---MYRYLW--SNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAG-VRKYIRFNTAVRHVEFN--- 132 (464)
T ss_dssp CCCC---CCTTCB--CSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHT-CGGGEECSEEEEEEEEE---
T ss_pred CcCc---cccchh--hcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcC-CcceEEeCCEEEEEEEc---
Confidence 0000 000000 000000000 00000000000123578899999999988877 77 9999999999761
Q ss_pred CCcccCCCCCcccccccCCeeEEEcCC---C--cEEEeeEEEEecCCCchhh
Q 010200 205 SSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADGGKSRVR 251 (515)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~vV~AdG~~S~vr 251 (515)
+....++|++.+ | .++.+|.||+|+|.+|.-+
T Consensus 133 ---------------~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 133 ---------------EDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp ---------------TTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred ---------------CCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 112356666654 4 4789999999999876544
No 100
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.98 E-value=2.1e-09 Score=104.94 Aligned_cols=119 Identities=16% Similarity=0.163 Sum_probs=78.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
+.|||+||||||||+++|+.|++. |++|+|||+....+ .| ..+ .+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~----g~~v~liE~~~~gg--~~------~~G--------------------~~~~- 49 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRS----SLKPVMYEGFMAGG--VA------AGG--------------------QLTT- 49 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSGGG--CC------TTC--------------------GGGG-
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCCCC--cc------cCC--------------------CcCC-
Confidence 459999999999999999999996 99999999976431 00 000 0000
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
... +.+..+ .+ ..+...++...+.+.+.+.+ .++..+ .+.....
T Consensus 50 ----~~~--i~~~~g-------------~~--~~i~~~~l~~~~~~~~~~~~-~~~~~~-~v~~~~~------------- 93 (314)
T 4a5l_A 50 ----TTI--IENFPG-------------FP--NGIDGNELMMNMRTQSEKYG-TTIITE-TIDHVDF------------- 93 (314)
T ss_dssp ----SSE--ECCSTT-------------CT--TCEEHHHHHHHHHHHHHHTT-CEEECC-CEEEEEC-------------
T ss_pred ----hHH--hhhccC-------------Cc--ccCCHHHHHHHHHHHHhhcC-cEEEEe-EEEEeec-------------
Confidence 000 000000 00 12456678888888888887 777755 5555543
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCc
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S 248 (515)
......+...++.++.+|.||.|+|+..
T Consensus 94 -------~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 94 -------STQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp -------SSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred -------CCCceEEEECCCeEEEEeEEEEcccccc
Confidence 3344566667888999999999999754
No 101
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.96 E-value=2.2e-09 Score=113.93 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEE-cCCCc--EEEeeEEEEecCCC
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD-LSDGT--SLYAKLVVGADGGK 247 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~g~--~~~ad~vV~AdG~~ 247 (515)
..+...|.+.+.+.| ++|+++++|+++.. + +++ ...++.+. ..+|+ ++.|+.||.|+|.+
T Consensus 143 ~~l~~~L~~~~~~~g-v~i~~~~~v~~L~~---------~--~~g-----~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNH-TTIFSEWYALDLVK---------N--QDG-----AVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEE---------C--TTS-----CEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCcEEEEEEE---------C--CCC-----EEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 678899999998887 99999999999976 0 001 11223333 24565 68999999999999
Q ss_pred chh
Q 010200 248 SRV 250 (515)
Q Consensus 248 S~v 250 (515)
|.+
T Consensus 206 ~~~ 208 (588)
T 2wdq_A 206 GRI 208 (588)
T ss_dssp GGG
T ss_pred ccc
Confidence 875
No 102
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.95 E-value=1.3e-09 Score=112.76 Aligned_cols=155 Identities=14% Similarity=0.142 Sum_probs=86.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCC-----cEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCch
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKH-----LSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQ 128 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G-----~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~ 128 (515)
..+||+||||||+|+++|+.|++. | ++|+|||+.+.++.... ... . +..++. .+++.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~----g~~~~~~~v~liE~~~~~g~~~~---~~~-~--~~~~~~---~~~~~l~~-- 93 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER----AQAQGALEVLFLDKQGDYRWHGN---TLV-S--QSELQI---SFLKDLVS-- 93 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH----HHHHCCCCEEEEESCSSCCSSGG---GCC-S--SCBCSS---CTTSSSST--
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc----ccccCcccEEEEecCCCCCCcCC---CCC-C--CCcCCc---chhhcccc--
Confidence 458999999999999999999996 8 89999999987631100 000 0 000000 00000000
Q ss_pred hhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcc
Q 010200 129 YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (515)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~ 208 (515)
+..... .+.-..+....+ ....+. ........+..+..+|...+.+.+ ++++++++|++++..
T Consensus 94 -~~~p~~-~~~~~~~l~~~~-~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~-~~i~~~~~V~~i~~~------- 156 (463)
T 3s5w_A 94 -LRNPTS-PYSFVNYLHKHD-RLVDFI------NLGTFYPCRMEFNDYLRWVASHFQ-EQSRYGEEVLRIEPM------- 156 (463)
T ss_dssp -TTCTTC-TTSHHHHHHHTT-CHHHHH------HHCCSCCBHHHHHHHHHHHHTTCT-TTEEESEEEEEEEEE-------
T ss_pred -ccCCCC-CCChhHhhhhcC-ceeecc------cccCCCCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEEe-------
Confidence 000000 000000000000 000000 000123467888899988888887 899999999999760
Q ss_pred cCCCCCcccccccCC--eeEEEcCCCc----EEEeeEEEEecCCCchh
Q 010200 209 VDSTPSATTLFTKGH--LAKLDLSDGT----SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~--~~~v~~~~g~----~~~ad~vV~AdG~~S~v 250 (515)
. +... .++|...+|. ++.+|.||+|+|....+
T Consensus 157 --~--------~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 157 --L--------SAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp --E--------ETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEECC
T ss_pred --c--------CCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCCC
Confidence 0 0122 2467666665 89999999999985443
No 103
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.95 E-value=3.3e-09 Score=109.68 Aligned_cols=62 Identities=16% Similarity=0.074 Sum_probs=45.9
Q ss_pred chHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCee---EEEcCCCcEEEeeEEEEecC
Q 010200 169 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA---KLDLSDGTSLYAKLVVGADG 245 (515)
Q Consensus 169 ~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~g~~~~ad~vV~AdG 245 (515)
....+...|.+.+++.| ++++.+++| ++.. +++.+ .+...+| ++.+|.||+|+|
T Consensus 117 ~g~~l~~~L~~~~~~~g-v~i~~~~~v-~l~~--------------------~~~~v~Gv~v~~~~g-~~~a~~VVlAtG 173 (472)
T 2e5v_A 117 TGREIFNFLLKLAREEG-IPIIEDRLV-EIRV--------------------KDGKVTGFVTEKRGL-VEDVDKLVLATG 173 (472)
T ss_dssp HHHHHHHHHHHHHHHTT-CCEECCCEE-EEEE--------------------ETTEEEEEEETTTEE-ECCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhCC-CEEEECcEE-EEEE--------------------eCCEEEEEEEEeCCC-eEEeeeEEECCC
Confidence 35678889999887776 999999999 9975 22222 3322333 477999999999
Q ss_pred CCchhhhh
Q 010200 246 GKSRVREL 253 (515)
Q Consensus 246 ~~S~vr~~ 253 (515)
.+|.++..
T Consensus 174 g~~~~~~~ 181 (472)
T 2e5v_A 174 GYSYLYEY 181 (472)
T ss_dssp CCGGGSSS
T ss_pred CCcccCcc
Confidence 99988664
No 104
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.95 E-value=9.4e-09 Score=107.15 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
..+.+.|.+.+.+.|+++|+++++|++|+. .++.++|++.+|+++.||.||.|.|....
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN--------------------ERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE--------------------CSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE--------------------cCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 356677778887775588999999999986 33458888888888999999999997543
No 105
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.93 E-value=1e-09 Score=114.92 Aligned_cols=42 Identities=36% Similarity=0.429 Sum_probs=37.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~ 97 (515)
+.++||||||||++||++|+.|+++ .|++|+|||+++.++..
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~---~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQI---DGPSWMIVDSNETPGGL 49 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH---CCSCEEEEESSSSCCGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhh---CCCCEEEEECCCCCcCC
Confidence 4569999999999999999999874 39999999999988643
No 106
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.92 E-value=5.3e-09 Score=111.27 Aligned_cols=63 Identities=19% Similarity=0.097 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEc-CCCc--EEEeeEEEEecCC
Q 010200 170 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGT--SLYAKLVVGADGG 246 (515)
Q Consensus 170 r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~--~~~ad~vV~AdG~ 246 (515)
...+...|.+.+.+.| ++|+.++.|+++..+ ++ ...++.+.. .+|+ ++.|+.||.|+|.
T Consensus 154 G~~l~~~L~~~~~~~g-v~i~~~~~v~~Li~~------------~g-----~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYD-TSYFVEYFALDLLME------------NG-----ECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHHTTSC-CEEEETEEEEEEEEE------------TT-----EEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCC-CEEEEceEEEEEEEE------------CC-----EEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 3578899999998887 999999999999760 00 112233332 4665 6899999999999
Q ss_pred Cchh
Q 010200 247 KSRV 250 (515)
Q Consensus 247 ~S~v 250 (515)
++.+
T Consensus 216 ~~~~ 219 (621)
T 2h88_A 216 YGRT 219 (621)
T ss_dssp CGGG
T ss_pred cccc
Confidence 9976
No 107
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.89 E-value=4e-09 Score=110.56 Aligned_cols=118 Identities=23% Similarity=0.325 Sum_probs=83.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
...+||+||||||+|+++|+.|++. |++|+|+|+.... .| .. ..++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~----G~~v~lie~~~GG---~~------~~---------------~~~~------ 255 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK----GIRTGLMGERFGG---QV------LD---------------TVDI------ 255 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSTTG---GG------TT---------------CSCB------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC----CCeEEEEECCCCC---cc------cc---------------cccc------
Confidence 3468999999999999999999996 9999999863210 00 00 0000
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
. .+. . . ....+..+...|.+.+.+.| ++++.+++|+.+.. +.
T Consensus 256 ------~-------------~~~--~---~---~~~~~~~l~~~l~~~~~~~g-v~v~~~~~v~~i~~---------~~- 297 (521)
T 1hyu_A 256 ------E-------------NYI--S---V---PKTEGQKLAGALKAHVSDYD-VDVIDSQSASKLVP---------AA- 297 (521)
T ss_dssp ------C-------------CBT--T---B---SSBCHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CS-
T ss_pred ------c-------------ccC--C---C---CCCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEe---------cc-
Confidence 0 000 0 0 01346678888999998887 99999999999964 00
Q ss_pred CCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 213 PSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
+.+..++|.+++|.++.+|.||.|+|.++.
T Consensus 298 -------~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 298 -------TEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp -------STTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred -------CCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 012457888888889999999999998654
No 108
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.88 E-value=7.2e-09 Score=111.03 Aligned_cols=62 Identities=16% Similarity=0.071 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEE-cCCCc--EEEeeEEEEecCCC
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD-LSDGT--SLYAKLVVGADGGK 247 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~g~--~~~ad~vV~AdG~~ 247 (515)
..+...|.+.+.+.| ++|+.++.|+++..+ ++ ...++.+. ..+|+ .+.||.||.|+|.+
T Consensus 158 ~~l~~~L~~~a~~~g-v~i~~~~~v~~L~~~------------~g-----~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECLKLG-VSIQDRKEAIALIHQ------------DG-----KCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSEEEEEEEEE------------TT-----EEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCC-CEEEECcEEEEEEec------------CC-----EEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 478899999988887 999999999999750 00 11233332 25665 58999999999999
Q ss_pred chh
Q 010200 248 SRV 250 (515)
Q Consensus 248 S~v 250 (515)
+.+
T Consensus 220 ~~~ 222 (660)
T 2bs2_A 220 GRI 222 (660)
T ss_dssp GGG
T ss_pred hhh
Confidence 976
No 109
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.86 E-value=1.1e-08 Score=99.68 Aligned_cols=35 Identities=26% Similarity=0.496 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..|||+||||||||+++|+.|++. |++|+||||..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~----g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA----NLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEecCC
Confidence 479999999999999999999996 99999999864
No 110
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.86 E-value=1.9e-08 Score=105.61 Aligned_cols=70 Identities=30% Similarity=0.409 Sum_probs=48.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC--C-CCCCcEEEe---CHhHHHHHHHcCCc
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKE--D-PPDPRVSTV---TPATISFFKEIGAW 127 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~--~-~~~~~~~~l---~~~~~~~l~~lgl~ 127 (515)
..+||+|||||++||++|+.|++. |++|+|||+++.++.+.+.... + .....+..+ .+...++++++|+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~----G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 78 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS----GLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLE 78 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT----TCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCc
Confidence 457999999999999999999996 9999999999887544321110 0 001111122 34566788888874
No 111
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.85 E-value=6e-08 Score=105.66 Aligned_cols=39 Identities=23% Similarity=0.508 Sum_probs=35.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
..+||+|||||++|+++|+.|++. |++|+|+|+...++.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF----GIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEecccceec
Confidence 468999999999999999999996 999999999887754
No 112
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.84 E-value=3.4e-09 Score=109.60 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=83.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeC---HhHHHHHHHcCCchhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVT---PATISFFKEIGAWQYVQ 131 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~l~~lgl~~~~~ 131 (515)
++||+||||||+|+++|+.|++. |++|+|+|+.. .+ |..++ ..+..++...++++.+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~----G~~V~liE~~~-~g--------------G~~~~~g~~psk~ll~~~~~~~~~~ 63 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL----GLSTAIVEPKY-WG--------------GVCLNVGCIPSKALLRNAELVHIFT 63 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSC-TT--------------HHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCC-CC--------------CcccccCchhhHHHHHHHHHHHHHH
Confidence 58999999999999999999996 99999999983 31 11111 11223344334444433
Q ss_pred hhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 010200 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (515)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~ 211 (515)
.... . ..+. .. ....+. ...... . -....+...+.+.+.+.+ ++++.++.+. +
T Consensus 64 ~~~~-~-~g~~--~~---~~~~~~--~~~~~~-~--~~~~~l~~~l~~~~~~~g-v~~~~g~~~~-i------------- 116 (464)
T 2a8x_A 64 KDAK-A-FGIS--GE---VTFDYG--IAYDRS-R--KVAEGRVAGVHFLMKKNK-ITEIHGYGTF-A------------- 116 (464)
T ss_dssp HHTT-T-TTEE--EC---CEECHH--HHHHHH-H--HHHHHHHHHHHHHHHHTT-CEEECEEEEE-S-------------
T ss_pred HHHH-h-cCCC--CC---CccCHH--HHHHHH-H--HHHHHHHHHHHHHHHhCC-CEEEEeEEEE-e-------------
Confidence 1111 1 1121 10 001100 000000 0 001345555666777666 9999887543 2
Q ss_pred CCCcccccccCCeeEEEcCCC--cEEEeeEEEEecCCCchhhh
Q 010200 212 TPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSRVRE 252 (515)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g--~~~~ad~vV~AdG~~S~vr~ 252 (515)
+...+++.+.+| .++.+|.||+|+|.++.+..
T Consensus 117 ---------d~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~ 150 (464)
T 2a8x_A 117 ---------DANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP 150 (464)
T ss_dssp ---------SSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT
T ss_pred ---------cCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 225577877777 68999999999999876543
No 113
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.83 E-value=9.3e-09 Score=106.87 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
..+...|.+.+++.| ++++.+++|++++. .+..+.+.+.+|+++.+|.||.|+|..+..
T Consensus 232 ~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKG-ISIIYEATVSQVQS--------------------TENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEe--------------------eCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 356777888888888 99999999999976 334578888999899999999999986654
No 114
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.83 E-value=3.1e-08 Score=106.30 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=33.5
Q ss_pred CCccEEEECCCHHHHHHHHHHh---c-CCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLA---S-MPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~---~-~~~~~G~~V~v~E~~~~~ 94 (515)
.++||||||||+|||++|+.|+ + . |.+|+|+||....
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~----G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG----GLKVTLVEKAAVE 61 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT----TCCEEEECSSCTT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC----CCeEEEEeCcCCC
Confidence 4689999999999999999999 5 5 8999999999864
No 115
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.81 E-value=4.9e-09 Score=108.79 Aligned_cols=37 Identities=27% Similarity=0.472 Sum_probs=33.7
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.++||+||||||+|+++|+.|++. |++|+|+|+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~----G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL----GFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCc
Confidence 468999999999999999999996 8999999997655
No 116
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.77 E-value=4.1e-08 Score=105.10 Aligned_cols=68 Identities=16% Similarity=0.130 Sum_probs=46.5
Q ss_pred echHHHHHHHHHHHhcC--CCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEE-EcCCCc--EEEeeEEEE
Q 010200 168 VENKVLHSSLLSCMQNT--EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKL-DLSDGT--SLYAKLVVG 242 (515)
Q Consensus 168 i~r~~l~~~L~~~~~~~--g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~g~--~~~ad~vV~ 242 (515)
+....+...|.+.+.+. + ++|+.++.|+++..+ .+..+ ...++.+ ...+|+ ++.|+.||.
T Consensus 163 ~~G~~i~~~L~~~a~~~~~g-V~i~~~~~v~dLi~~---------~~~~g-----~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQ-DRIIERIFIVKLLLD---------KNTPN-----RIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCT-TTEECSEEECCCEEC---------SSSTT-----BEEEEEEEESSSSCEEEEECSEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCC-cEEEEceEEEEEEEe---------CCccc-----eEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 45567888888888887 6 999999999998761 10000 1112222 224554 689999999
Q ss_pred ecCCCchh
Q 010200 243 ADGGKSRV 250 (515)
Q Consensus 243 AdG~~S~v 250 (515)
|+|..+.+
T Consensus 228 ATGG~g~~ 235 (662)
T 3gyx_A 228 ACGGAVNV 235 (662)
T ss_dssp CCCCBCSS
T ss_pred CCCccccc
Confidence 99999864
No 117
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.76 E-value=7.6e-09 Score=105.85 Aligned_cols=37 Identities=19% Similarity=0.455 Sum_probs=32.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~~ 94 (515)
+.+||+|||||++|+++|..|++. |+ +|+|+|+.+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~----g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS----GWEGNIRLVGDATVI 41 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSCCSC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc----CcCCCEEEEECCCCC
Confidence 458999999999999999999996 66 89999988743
No 118
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.75 E-value=2.1e-08 Score=97.68 Aligned_cols=112 Identities=16% Similarity=0.174 Sum_probs=76.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEE-EcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAI-IDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v-~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (515)
..+||+|||||++|+++|+.|++. |++|+| +|| ..++.. + ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~li~e~-~~~gG~-~-------------------------------~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG----GLKNVVMFEK-GMPGGQ-I-------------------------------TS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH----TCSCEEEECS-SSTTGG-G-------------------------------GG
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCCeEEEEeC-CCCCce-e-------------------------------ee
Confidence 458999999999999999999996 899999 999 333100 0 00
Q ss_pred hhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCC
Q 010200 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (515)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~ 212 (515)
. . .. ..++ . ....+....+...+.+.+.+.+ ++++.+ +|+++ .
T Consensus 46 ~-~-~~-------------~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~-v~~~~~-~v~~i-~------------ 88 (315)
T 3r9u_A 46 S-S-EI-------------ENYP-----G--VAQVMDGISFMAPWSEQCMRFG-LKHEMV-GVEQI-L------------ 88 (315)
T ss_dssp C-S-CB-------------CCST-----T--CCSCBCHHHHHHHHHHHHTTTC-CEEECC-CEEEE-E------------
T ss_pred e-c-ee-------------ccCC-----C--CCCCCCHHHHHHHHHHHHHHcC-cEEEEE-EEEEE-e------------
Confidence 0 0 00 0000 0 0012456788899999999888 999988 89888 6
Q ss_pred CCcccccccC--CeeEE-EcCCCcEEEeeEEEEecCCCc
Q 010200 213 PSATTLFTKG--HLAKL-DLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 213 ~~~~~~~~~~--~~~~v-~~~~g~~~~ad~vV~AdG~~S 248 (515)
+. ..+.+ ...++ ++.+|.||.|+|...
T Consensus 89 --------~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 89 --------KNSDGSFTIKLEGGK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp --------ECTTSCEEEEETTSC-EEEEEEEEECCCEEE
T ss_pred --------cCCCCcEEEEEecCC-EEEeCEEEEeeCCCC
Confidence 22 44663 22334 899999999999743
No 119
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=1.3e-08 Score=105.49 Aligned_cols=37 Identities=32% Similarity=0.510 Sum_probs=34.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.++||+||||||+|+++|+.|++. |++|+|+|+.+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~----g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL----GFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCc
Confidence 468999999999999999999996 8999999998765
No 120
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.73 E-value=1.4e-08 Score=104.92 Aligned_cols=37 Identities=35% Similarity=0.473 Sum_probs=33.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.++||+||||||+|+++|+.|++. |++|+|+||.+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~----G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA----KYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC----CCeEEEEECCCCC
Confidence 358999999999999999999996 9999999988765
No 121
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.72 E-value=6.9e-08 Score=101.12 Aligned_cols=37 Identities=30% Similarity=0.459 Sum_probs=33.8
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++.++||+||||||+|+++|+.|++. |++|+|+|+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~----G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY----GKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeccC
Confidence 44579999999999999999999996 99999999975
No 122
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.70 E-value=8.1e-08 Score=98.33 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCC
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 247 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 247 (515)
..|.+.|.+.+++.| ++|+.+++|++|.. + +++..+.|.+.+|+++.||.||.+.|..
T Consensus 256 ~~L~~aL~r~~~~~G-g~i~l~t~V~~I~~---------d---------~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAING-GTFMLNKNVVDFVF---------D---------DDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEE---------C---------TTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCeEEEEEE---------e---------cCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 467788889899988 89999999999975 0 1234466888888899999999999987
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.69 E-value=1.2e-08 Score=105.89 Aligned_cols=38 Identities=42% Similarity=0.621 Sum_probs=34.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+.++||+|||||++|+++|+.|++. |++|+|+|+.+.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~----G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE----GLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCC
Confidence 3468999999999999999999996 9999999997655
No 124
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.67 E-value=3.4e-07 Score=94.13 Aligned_cols=70 Identities=33% Similarity=0.400 Sum_probs=47.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC-CC-CCCcEEEe---CHhHHHHHHHcCCc
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKE-DP-PDPRVSTV---TPATISFFKEIGAW 127 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~-~~-~~~~~~~l---~~~~~~~l~~lgl~ 127 (515)
.++||+|||||++||++|+.|++. |++|+|||++..++...+.... +. ....+..+ .+...++++++|+.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA----GLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 458999999999999999999996 9999999999887544321000 00 00000111 35566788888864
No 125
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.66 E-value=1.4e-07 Score=98.90 Aligned_cols=41 Identities=17% Similarity=0.382 Sum_probs=36.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCC-cEEEEEcCCCCCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPALGKSN 98 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G-~~V~v~E~~~~~~~~~ 98 (515)
..+||+|||||++||++|+.|++. | ++|+|||++..++.+.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~----G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN----GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT----TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc----CCCCEEEEeCCCCCCCce
Confidence 458999999999999999999996 8 9999999999886543
No 126
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.65 E-value=1.9e-08 Score=102.41 Aligned_cols=37 Identities=30% Similarity=0.500 Sum_probs=33.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcE--EEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLS--VAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~--V~v~E~~~~~ 94 (515)
+.+||+|||||++|+++|..|++. |++ |+|+|+.+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~----g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN----GFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc----CcCCCEEEEecCCCC
Confidence 468999999999999999999997 666 9999998854
No 127
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.63 E-value=2.4e-08 Score=102.88 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
++||+|||||++|+++|+.|++. |++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL----GQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC----CCeEEEEECC
Confidence 58999999999999999999996 8999999998
No 128
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.63 E-value=6.6e-08 Score=99.45 Aligned_cols=38 Identities=21% Similarity=0.448 Sum_probs=33.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+||+|||||++|+++|+.|++.+ +|++|+|||+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~--~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK--PEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC--cCCCEEEEECCCcc
Confidence 479999999999999999999853 37899999998855
No 129
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.62 E-value=2.3e-07 Score=96.64 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=49.5
Q ss_pred EechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCC-----cEEEeeEEE
Q 010200 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG-----TSLYAKLVV 241 (515)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-----~~~~ad~vV 241 (515)
...|.++.++|...+++.+ ..|+++++|++++.. +++.. ......++|+..++ .++.|+.||
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~-~~vrf~~~V~~v~~~---------~~~~~---~~~~~~~~V~~~~~~~g~~~~~~ar~vV 207 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFS-DVVAYGEEVVEVIPG---------KSDPS---SSVVDFFTVRSRNVETGEISARRTRKVV 207 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTG-GGEEESEEEEEEEEE---------CSSTT---SSCBCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcC-CceEcceEEEeeccc---------ccccc---ccccceEEEEEecCCCceEEEEEeCEEE
Confidence 4678999999999999887 789999999999861 11100 01224577776543 268999999
Q ss_pred EecCCC
Q 010200 242 GADGGK 247 (515)
Q Consensus 242 ~AdG~~ 247 (515)
.|+|..
T Consensus 208 latG~~ 213 (501)
T 4b63_A 208 IAIGGT 213 (501)
T ss_dssp ECCCCE
T ss_pred ECcCCC
Confidence 999964
No 130
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.62 E-value=3.9e-08 Score=101.22 Aligned_cols=37 Identities=14% Similarity=0.381 Sum_probs=33.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+||+|||||++|+++|..|++.+ +|++|+|||+.+.+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~--~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY--PQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCCC
Confidence 69999999999999999999853 38999999999866
No 131
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.60 E-value=1.5e-07 Score=97.13 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEE-cCCCcEEEeeEEEEecCCCch
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD-LSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~g~~~~ad~vV~AdG~~S~ 249 (515)
..+...+.+.+++.| ++++.+++|++++. +.+..+.|. +++|+ +.+|.||.|.|....
T Consensus 211 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 QDMRRGLHAAMEEKG-IRILCEDIIQSVSA-------------------DADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------CTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCC-CEEECCCEEEEEEE-------------------cCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 456778888888888 99999999999976 112336788 88887 999999999998654
Q ss_pred h
Q 010200 250 V 250 (515)
Q Consensus 250 v 250 (515)
.
T Consensus 270 ~ 270 (463)
T 4dna_A 270 T 270 (463)
T ss_dssp C
T ss_pred C
Confidence 3
No 132
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.60 E-value=8.1e-08 Score=96.55 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=33.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++.+|+|||||+||+++|..|++ .+.+|+|||+.+.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~----~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG----KCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT----TCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC----CCCEEEEEECCCCC
Confidence 45789999999999999999965 48999999999865
No 133
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.58 E-value=3e-08 Score=101.63 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHhc---CCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~V~v~E~~~~~ 94 (515)
.||+|||||++|+++|..|++ . |++|+|||+.+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~----g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS----GHEVTLISANDYF 42 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG----GSEEEEECSSSEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC----cCEEEEEeCCCCC
Confidence 689999999999999999998 5 8999999998743
No 134
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.58 E-value=1.3e-08 Score=106.00 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=33.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCC---cEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKH---LSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G---~~V~v~E~~~~~ 94 (515)
+++||+|||||++|+++|..|++. | .+|+|||+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~----g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN----YGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----HGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc----CCCCCeEEEEECCCCC
Confidence 358999999999999999999996 6 999999998754
No 135
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.58 E-value=3.2e-07 Score=95.37 Aligned_cols=41 Identities=24% Similarity=0.434 Sum_probs=36.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~ 97 (515)
+..+||+|||||++||++|+.|++. |++|+|||+.+.++..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~----g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA----GYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeccCCCCCc
Confidence 3568999999999999999999996 9999999999887654
No 136
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.56 E-value=4e-08 Score=99.68 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=32.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~~ 94 (515)
.++||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA----GYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH----TCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc----CCCCeEEEEECCCCC
Confidence 468999999999999999999996 66 59999998754
No 137
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.56 E-value=1.2e-07 Score=98.61 Aligned_cols=39 Identities=26% Similarity=0.435 Sum_probs=33.0
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+++++||+||||||+|+++|+.|++. |++|+|+||.+.+
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~~~ 60 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQL----GMKVAVVEKRSTY 60 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCC
Confidence 34569999999999999999999996 9999999998765
No 138
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.55 E-value=1.1e-07 Score=98.33 Aligned_cols=36 Identities=33% Similarity=0.554 Sum_probs=33.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++||+|||||++|+++|+.|++. |++|+|+|+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL----GMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCc
Confidence 58999999999999999999996 9999999998755
No 139
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.54 E-value=7.2e-08 Score=99.87 Aligned_cols=37 Identities=30% Similarity=0.391 Sum_probs=33.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+||+||||||+|+++|+.|++. |++|+|||+.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL----GFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCc
Confidence 458999999999999999999996 8999999998755
No 140
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.54 E-value=4.1e-07 Score=92.95 Aligned_cols=58 Identities=7% Similarity=-0.051 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
..+.+.|.+.+++.| ++|+++++|++|.. .++.+.....+|+++.||.||.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~--------------------~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYG-GTYMLNKPVDDIIM--------------------ENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHT-CCCBCSCCCCEEEE--------------------ETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------eCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 477888888888888 89999999999976 23444433357888999999999999875
No 141
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.53 E-value=1.5e-07 Score=96.98 Aligned_cols=36 Identities=31% Similarity=0.540 Sum_probs=33.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++||+||||||+|+++|+.|++. |++|+|+|+.+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL----GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC----CCeEEEEeCCCCC
Confidence 37999999999999999999996 8999999998755
No 142
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.52 E-value=1.3e-07 Score=97.82 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++||+|||||++|+++|+.|++.+ +|++|+|||+.+.+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~--~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD--PEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC--TTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC--cCCCEEEEECCCcc
Confidence 469999999999999999999853 38999999999865
No 143
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.52 E-value=3.9e-08 Score=102.06 Aligned_cols=38 Identities=16% Similarity=0.371 Sum_probs=32.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+||+|||||++|+++|+.|++.+ +|.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~--~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRND--ENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHC--TTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCCC
Confidence 369999999999999999999842 38999999998755
No 144
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.50 E-value=2.4e-07 Score=94.63 Aligned_cols=37 Identities=32% Similarity=0.606 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.||+|||||++|+++|+.|++.+ +|++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~--~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM--PDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--TTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCC--CCCeEEEECCCCCC
Confidence 68999999999999999999931 28999999998854
No 145
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.49 E-value=6.4e-08 Score=98.22 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHhc---CCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~G~~V~v~E~~~~~ 94 (515)
.||+|||||++|+++|+.|++ . |++|+|||+++..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~----g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS----KADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG----GSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC----CCeEEEEeCCCCc
Confidence 379999999999999999998 6 8999999998844
No 146
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.49 E-value=4.8e-07 Score=90.91 Aligned_cols=101 Identities=22% Similarity=0.315 Sum_probs=81.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+. .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~~----------~---------------------------- 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG----GYQLDVVAPCEQVM----------P---------------------------- 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEecCcchh----------h----------------------------
Confidence 46899999999999999999996 89999999987541 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. .....+...|.+.+++.| ++++++++|++++.
T Consensus 183 -------------~-------------------~~~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 215 (384)
T 2v3a_A 183 -------------G-------------------LLHPAAAKAVQAGLEGLG-VRFHLGPVLASLKK-------------- 215 (384)
T ss_dssp -------------T-------------------TSCHHHHHHHHHHHHTTT-CEEEESCCEEEEEE--------------
T ss_pred -------------c-------------------ccCHHHHHHHHHHHHHcC-CEEEeCCEEEEEEe--------------
Confidence 0 001245567777888887 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
.+..+.+.+.+|+++.+|.||.|+|.++..
T Consensus 216 ------~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 216 ------AGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp ------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------cCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 334578888899899999999999987754
No 147
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.49 E-value=1.6e-07 Score=97.36 Aligned_cols=37 Identities=30% Similarity=0.455 Sum_probs=34.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++|||+||||||+|+++|+.|++. |++|+|+|+.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL----GLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH----TCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC----CCEEEEEeCCCcc
Confidence 469999999999999999999996 9999999998754
No 148
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.49 E-value=1.8e-07 Score=99.63 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=35.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+...||+|||||++|+++|+.|++.+ +|++|+|||+.+..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~--~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLS--EEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHC--SSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhC--cCCCEEEEECCCCc
Confidence 44679999999999999999999853 38999999999865
No 149
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.48 E-value=9.9e-07 Score=92.24 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
.++...+.+.+++.| ++++.++.+..++. .+..+.+.+.++.++.+|.|+.|.|....+
T Consensus 263 ~ei~~~l~~~l~~~g-i~~~~~~~v~~~~~--------------------~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQG-VMFKNGILPKKLTK--------------------MDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred hhHHHHHHHHHHhhc-ceeecceEEEEEEe--------------------cCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 456778888888888 99999999999976 556788999999899999999999976554
No 150
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.47 E-value=9.3e-08 Score=96.89 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~~ 94 (515)
.||+|||||++|+++|..|++. |+ +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~----g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA----KYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh----CcCCCEEEEeCCCCC
Confidence 5899999999999999999996 67 89999998854
No 151
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.46 E-value=3e-07 Score=91.79 Aligned_cols=35 Identities=34% Similarity=0.500 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..||+||||||||+++|..|++. | +|+|+|+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~----g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT----Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT----S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc----C-CEEEEECCCCC
Confidence 46999999999999999999996 8 99999998754
No 152
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=5.4e-08 Score=100.03 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+||+|||||++|+++|..|++.+ +|.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~--~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLH--PDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--TTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhC--cCCeEEEEECCCcc
Confidence 48999999999999999999853 38999999998755
No 153
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.46 E-value=2e-07 Score=96.24 Aligned_cols=35 Identities=29% Similarity=0.362 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.++||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ----GAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCC
Confidence 468999999999999999999996 89999999983
No 154
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.45 E-value=3.4e-07 Score=93.49 Aligned_cols=35 Identities=34% Similarity=0.641 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+|||||||+||+++|..|++.+ ++++|+|+|+++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~--~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLM--PDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC--TTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccC--cCCeEEEEcCCCC
Confidence 6999999999999999999853 3689999999874
No 155
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.45 E-value=5.3e-08 Score=100.23 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+||+|||||++|+++|..|++.+ +|.+|+|+|+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~--~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADH--PDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCCC
Confidence 58999999999999999999842 38999999998754
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.44 E-value=5e-07 Score=92.96 Aligned_cols=100 Identities=19% Similarity=0.276 Sum_probs=78.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+. +. .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~----g~~V~lv~~~~~~l----------~~-----~--------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL----GAEVIVLEYMDRIL----------PT-----M--------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------TT-----S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCEEEEEecCCccc----------cc-----c---------------------
Confidence 35799999999999999999996 89999999987541 00 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
...+.+.|.+.+++.| ++++++++|++++.
T Consensus 207 -----------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~-------------- 236 (455)
T 2yqu_A 207 -----------------------------------DLEVSRAAERVFKKQG-LTIRTGVRVTAVVP-------------- 236 (455)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEECCEEEEEEE--------------
Confidence 0134455666666777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
.+..+.+.+++|+++.+|.||.|+|.++..
T Consensus 237 ------~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 237 ------EAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------eCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 334577888888899999999999988765
No 157
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.43 E-value=5.3e-07 Score=93.65 Aligned_cols=35 Identities=34% Similarity=0.498 Sum_probs=32.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|||+||||||+|+++|+.|++. |++|+|+||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~----G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL----GKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEEecc
Confidence 569999999999999999999996 99999999854
No 158
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.43 E-value=3.1e-07 Score=93.22 Aligned_cols=35 Identities=29% Similarity=0.549 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcE--EEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLS--VAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~--V~v~E~~~~~ 94 (515)
.+|+|||||+||+++|..|++. |++ |+|+|+.+.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~----g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE----GFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc----CcCCeEEEEECCCCC
Confidence 4899999999999999999997 665 9999998865
No 159
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.42 E-value=2.3e-07 Score=96.19 Aligned_cols=36 Identities=33% Similarity=0.502 Sum_probs=32.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+..+||+||||||+|+++|+.|++. |++|+|+|++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~----G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL----GARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEecCC
Confidence 3469999999999999999999996 99999999764
No 160
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.42 E-value=3.5e-07 Score=89.77 Aligned_cols=68 Identities=25% Similarity=0.338 Sum_probs=45.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGA 126 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl 126 (515)
..+||+|||||||||++|+.|++.. .|++|+||||.+.++..-+. .........+......+++++|+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r--~G~~V~viEk~~~~GG~~~~---~~~~~~~~~l~~~~~~~~~e~Gv 131 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSWL---GGQLFSAMVMRKPAHLFLQELEI 131 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTTC---CSTTCCCEEEETTTHHHHHHTTC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhC--CCCeEEEEECCCCCCceEEe---CCccCCHHHHHHHHHHHHHHcCC
Confidence 4589999999999999999997410 39999999999887533221 11112233455555566666654
No 161
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.41 E-value=3.9e-07 Score=95.49 Aligned_cols=40 Identities=33% Similarity=0.469 Sum_probs=35.6
Q ss_pred CCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.++..+||+|||||++|+++|+.|++. |++|+|||++..+
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~----G~~V~liE~~~~~ 78 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAM----GGRQLIVDRWPFL 78 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCC
Confidence 345679999999999999999999996 8999999998754
No 162
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=3.7e-07 Score=94.61 Aligned_cols=36 Identities=31% Similarity=0.485 Sum_probs=32.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+.++||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASY----GAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----SCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 3469999999999999999999996 99999999974
No 163
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.40 E-value=1.2e-06 Score=90.42 Aligned_cols=100 Identities=20% Similarity=0.283 Sum_probs=78.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. ..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~--------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL----GAEVTLIEYMPEIL----------PQ--------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------TT---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCeEEEEEcCCccc----------cc---------------------------
Confidence 35899999999999999999996 89999999987541 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
...++...|.+.+++.| ++++++++|++++.
T Consensus 208 ----------------------------------~~~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~-------------- 238 (464)
T 2eq6_A 208 ----------------------------------GDPETAALLRRALEKEG-IRVRTKTKAVGYEK-------------- 238 (464)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------
T ss_pred ----------------------------------cCHHHHHHHHHHHHhcC-CEEEcCCEEEEEEE--------------
Confidence 01234556777777777 99999999999975
Q ss_pred cccccccCCeeEEEcC-C--Cc--EEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLS-D--GT--SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~-~--g~--~~~ad~vV~AdG~~S~v 250 (515)
.+..+.+.+. + |+ ++.+|.||.|+|..+..
T Consensus 239 ------~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 239 ------KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ------ETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ------eCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 2344667665 5 76 89999999999987655
No 164
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.39 E-value=1.7e-06 Score=85.08 Aligned_cols=115 Identities=13% Similarity=0.144 Sum_probs=67.7
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC---CCC--CCCcEEEeC-HhH--HHHHHHcCCc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKK---EDP--PDPRVSTVT-PAT--ISFFKEIGAW 127 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~---~~~--~~~~~~~l~-~~~--~~~l~~lgl~ 127 (515)
+||+|||||+||+.+|+.|++. |++|+|+|+++.......... +-. +..+|.... ..+ .+-+..+|-
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~----G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg- 76 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL----GVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGS- 76 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTC-
T ss_pred CCEEEECchHHHHHHHHHHHHC----CCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCC-
Confidence 6899999999999999999996 999999999885443321111 111 111121111 111 222233321
Q ss_pred hhhhhhhccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEE
Q 010200 128 QYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSM 198 (515)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i 198 (515)
.+... . ....+ + ......++|..+...+.+.++..++++++.+ +|+++
T Consensus 77 -~m~~~-a-D~~~i-------------p------Ag~al~vDR~~f~~~~~~~le~~pni~l~q~-eV~~l 124 (443)
T 3g5s_A 77 -LVMEA-A-DLARV-------------P------AGGALAVDREEFSGYITERLTGHPLLEVVRE-EVREI 124 (443)
T ss_dssp -HHHHH-H-HHSEE-------------C------CTTEEEECHHHHHHHHHHHHHTCTTEEEECS-CCCSC
T ss_pred -hHhhh-h-hhcCC-------------C------CCccccCCcHHHHHHHHHHHHcCCCeEEEhh-hhhhh
Confidence 11110 0 00111 1 0112469999999999999999988888854 66655
No 165
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.38 E-value=3.1e-07 Score=99.53 Aligned_cols=41 Identities=27% Similarity=0.415 Sum_probs=36.0
Q ss_pred CCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
+...++||+||||||+||++|+.|++. |++|+|||+.+..+
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~----G~~V~liE~~~~~G 427 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVR----GYDVVLAEAGRDLG 427 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSC
T ss_pred cccccceEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCCC
Confidence 344578999999999999999999996 99999999987663
No 166
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.37 E-value=8.7e-07 Score=91.01 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=77.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~~-------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL----GAKTHLFEMFDAPL----------P-----SFD-------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCEEEEEEeCCchh----------h-----hhh--------------------
Confidence 35899999999999999999996 89999999887540 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+.+.|.+.+++.| ++++++++|++++.
T Consensus 208 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 236 (450)
T 1ges_A 208 ------------------------------------PMISETLVEVMNAEG-PQLHTNAIPKAVVK-------------- 236 (450)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHS-CEEECSCCEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 013455666666777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
+.+..+.+.+.+|+++.+|.||.|+|..+..
T Consensus 237 -----~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 237 -----NTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp -----CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----eCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 0112367888899899999999999987665
No 167
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.37 E-value=9.1e-08 Score=99.54 Aligned_cols=41 Identities=24% Similarity=0.400 Sum_probs=34.6
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++..+||+|||||+||+++|..|++.+ .|.+|+|||+.+.+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~--~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARD--PGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHS--TTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcC--CCCeEEEEeCCCCC
Confidence 345689999999999999999887743 38999999998765
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.36 E-value=2.5e-07 Score=93.06 Aligned_cols=37 Identities=16% Similarity=0.397 Sum_probs=31.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.++||+|||||++|+++|+.|++.+ ...+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLD--GETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTC--SSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhC--CCCCEEEEECCC
Confidence 3589999999999999999999972 126799999876
No 169
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.36 E-value=1.8e-06 Score=89.60 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=32.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
..+|||+||||||+|+++|+.|++. |++|+|+||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~----G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN----GARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCEEEEEEec
Confidence 3579999999999999999999996 9999999964
No 170
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.36 E-value=7.2e-07 Score=92.94 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCC-CcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTK-HLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~-G~~V~v~E~~~ 92 (515)
++||+|||||++|+++|+.|++.. + |++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~--~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSH--PETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC--TTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CCcCEEEEEeCCC
Confidence 489999999999999999999941 1 89999999987
No 171
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.35 E-value=4.7e-07 Score=93.40 Aligned_cols=34 Identities=29% Similarity=0.462 Sum_probs=32.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++||+||||||+|+++|..|++. |++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~----g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL----GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 58999999999999999999996 89999999987
No 172
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.34 E-value=1.3e-06 Score=90.11 Aligned_cols=35 Identities=34% Similarity=0.602 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+++||+|||||++|+++|..|++. |++|+|||+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF----GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC----CCcEEEEcCCC
Confidence 469999999999999999999996 99999999973
No 173
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.33 E-value=8.4e-07 Score=91.74 Aligned_cols=40 Identities=28% Similarity=0.437 Sum_probs=34.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPALGKS 97 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~~~~~ 97 (515)
..+||+|||||++||++|+.|++. |+ +|+|+|+.+.++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~----g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA----GITDLLILEATDHIGGR 43 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT----TCCCEEEECSSSSSBTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc----CCCceEEEeCCCCCCCc
Confidence 458999999999999999999996 88 89999999877543
No 174
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.33 E-value=1.5e-06 Score=89.35 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.++||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY----GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT----TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC----CCeEEEEcCCC
Confidence 468999999999999999999996 99999999974
No 175
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.32 E-value=9.5e-07 Score=91.81 Aligned_cols=36 Identities=39% Similarity=0.558 Sum_probs=32.7
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+||+|||||++|+++|+.|++ . ++|+|||+.+.+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~----~-~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQ----Y-LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTT----T-CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHh----c-CCEEEEeCCCCC
Confidence 35799999999999999999999 5 899999999866
No 176
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.31 E-value=1.6e-06 Score=87.54 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+|||||||+||+++|..|++.+ .+.+|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~--~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLAD--PSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcC--cCCeEEEEeCCCC
Confidence 6999999999999999998863 3579999998874
No 177
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.31 E-value=1.4e-07 Score=98.11 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++||+||||||+|+++|+.|++. |++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~----G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH----TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT----CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCC
Confidence 58999999999999999999996 99999999975
No 178
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.31 E-value=2e-06 Score=89.35 Aligned_cols=33 Identities=36% Similarity=0.545 Sum_probs=30.7
Q ss_pred CCccEEEECCCHHHHHHHHHHhc-CCCCCCcEEEEEcC
Q 010200 54 DQYDVAVVGGGMVGMALACSLAS-MPLTKHLSVAIIDS 90 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~-~~~~~G~~V~v~E~ 90 (515)
.++||+||||||+|+++|+.|++ . |++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~----G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH----KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH----CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc----CCEEEEEec
Confidence 36899999999999999999999 7 899999994
No 179
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.30 E-value=8.4e-07 Score=93.93 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=33.0
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.||+|||||+||+++|..|++.+ .|++|+|||+.+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~--~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS--ETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--SSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhC--cCCCEEEEECCCCc
Confidence 48999999999999999999853 37999999999865
No 180
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.29 E-value=2e-06 Score=88.58 Aligned_cols=100 Identities=22% Similarity=0.219 Sum_probs=77.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||.+|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~----G~~Vtlv~~~~~~l----------~-----~~~-------------------- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSF----GSEVTVVALEDRLL----------F-----QFD-------------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEEcCCccc----------c-----ccC--------------------
Confidence 35799999999999999999996 89999999887540 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+...+.+.+++.| ++++++++|++++.
T Consensus 207 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 235 (463)
T 2r9z_A 207 ------------------------------------PLLSATLAENMHAQG-IETHLEFAVAALER-------------- 235 (463)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEESSCCEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 012244566667777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCc-EEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGT-SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~-~~~ad~vV~AdG~~S~v 250 (515)
..+.+.+.+.+|+ ++.+|.||.|+|.....
T Consensus 236 ------~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 236 ------DAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ------ETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred ------eCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 2234788888998 89999999999987654
No 181
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=5.2e-07 Score=94.01 Aligned_cols=34 Identities=38% Similarity=0.589 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH----NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 48999999999999999999996 99999999985
No 182
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.24 E-value=7.5e-06 Score=83.92 Aligned_cols=101 Identities=23% Similarity=0.248 Sum_probs=76.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
...+|+|||||++|+.+|..|++. |.+|+|+|+.+.+. ..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~-------------------------- 187 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA----GKKVTVIDILDRPL----------GV-------------------------- 187 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTT----------TT--------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCeEEEEecCcccc----------cc--------------------------
Confidence 457899999999999999999996 89999999987541 00
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
. + ..++...+.+.+++.| ++++++++|++++.
T Consensus 188 ---~----------------~---------------~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~------------- 219 (447)
T 1nhp_A 188 ---Y----------------L---------------DKEFTDVLTEEMEANN-ITIATGETVERYEG------------- 219 (447)
T ss_dssp ---T----------------C---------------CHHHHHHHHHHHHTTT-EEEEESCCEEEEEC-------------
T ss_pred ---c----------------C---------------CHHHHHHHHHHHHhCC-CEEEcCCEEEEEEc-------------
Confidence 0 0 0245567778888887 99999999999975
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
++....+.+ ++.++.+|.||.|+|.....
T Consensus 220 -------~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 220 -------DGRVQKVVT-DKNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp -------SSBCCEEEE-SSCEEECSEEEECSCEEESC
T ss_pred -------cCcEEEEEE-CCCEEECCEEEECcCCCCCh
Confidence 212224444 45689999999999986543
No 183
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.23 E-value=1.2e-06 Score=91.11 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=30.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhc-CCCCCCcEEEEEcC
Q 010200 54 DQYDVAVVGGGMVGMALACSLAS-MPLTKHLSVAIIDS 90 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~-~~~~~G~~V~v~E~ 90 (515)
.++||+||||||+|+++|+.|++ . |++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~----G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY----GKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH----CCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhc----CCeEEEEec
Confidence 46999999999999999999999 7 899999994
No 184
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=2.5e-06 Score=87.82 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
.++||+||||||+|+++|+.|++. |++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL----GIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH----TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCEEEEEccC
Confidence 358999999999999999999996 8999999994
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.16 E-value=8.5e-06 Score=82.50 Aligned_cols=108 Identities=20% Similarity=0.319 Sum_probs=81.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. +.. +
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtvv~~~~~~l-------------------~~~------------~---- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL----GLSVTILEAGDELL-------------------VRV------------L---- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS-------------------HHH------------H----
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEecCCccc-------------------hhh------------c----
Confidence 45799999999999999999996 89999999988550 000 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
...+...+.+.+++.| ++++++++|++++.
T Consensus 184 -----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 213 (410)
T 3ef6_A 184 -----------------------------------GRRIGAWLRGLLTELG-VQVELGTGVVGFSG-------------- 213 (410)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHT-CEEECSCCEEEEEC--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEec--------------
Confidence 0234456667777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch--hhhhcCCc
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR--VRELAGFK 257 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~--vr~~l~~~ 257 (515)
++....+.+++|+++.||+||.|.|.... +-+.+++.
T Consensus 214 ------~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 214 ------EGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp ------SSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCC
T ss_pred ------cCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCc
Confidence 22445788889999999999999998654 33344443
No 186
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.13 E-value=1.1e-05 Score=81.80 Aligned_cols=101 Identities=16% Similarity=0.253 Sum_probs=78.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtvv~~~~~~l~~------------------------------------- 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF----GVNVTLLEALPRVLAR------------------------------------- 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTTTT-------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCeEEEEecCCchhhh-------------------------------------
Confidence 45799999999999999999996 8999999998754100
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
.....+...+.+.+++.| ++++++++|++++.
T Consensus 191 ---------------------------------~~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 222 (415)
T 3lxd_A 191 ---------------------------------VAGEALSEFYQAEHRAHG-VDLRTGAAMDCIEG-------------- 222 (415)
T ss_dssp ---------------------------------TSCHHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------
T ss_pred ---------------------------------hcCHHHHHHHHHHHHhCC-CEEEECCEEEEEEe--------------
Confidence 001245566777777787 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
+++....|.+.+|+++.||.||.|.|....
T Consensus 223 -----~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 223 -----DGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp -----SSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred -----cCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 112334688899999999999999998664
No 187
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.12 E-value=8.2e-06 Score=86.90 Aligned_cols=35 Identities=31% Similarity=0.474 Sum_probs=32.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
...+||+||||||||+++|..|++. |++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~----g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY----GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC----CCeEEEEecc
Confidence 3569999999999999999999996 9999999984
No 188
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.12 E-value=6.3e-06 Score=84.67 Aligned_cols=100 Identities=13% Similarity=0.219 Sum_probs=76.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. +
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~---------------------------- 207 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF----GTKVTILEGAGEIL----------S---------------------------- 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCcEEEEEcCCccc----------c----------------------------
Confidence 46899999999999999999996 89999999987540 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. ....+...+.+.+++.| ++++++++|++++.
T Consensus 208 --~-------------------------------~~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 239 (455)
T 1ebd_A 208 --G-------------------------------FEKQMAAIIKKRLKKKG-VEVVTNALAKGAEE-------------- 239 (455)
T ss_dssp --T-------------------------------SCHHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------
T ss_pred --c-------------------------------cCHHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 0 00134456667777777 99999999999975
Q ss_pred cccccccCCeeEEEcC---CCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLS---DGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~---~g~~~~ad~vV~AdG~~S~v 250 (515)
+++.+.+.+. +++++.+|.||.|+|.....
T Consensus 240 ------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 240 ------REDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp ------ETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred ------eCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 2234566554 45679999999999987543
No 189
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.12 E-value=1.8e-06 Score=88.69 Aligned_cols=42 Identities=31% Similarity=0.379 Sum_probs=37.5
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~ 97 (515)
++.++||||||||++||++|+.|++. |++|+|+|+++.++..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~----G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVD----GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCCCCCcc
Confidence 34578999999999999999999996 9999999999988643
No 190
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.12 E-value=8.3e-06 Score=84.38 Aligned_cols=102 Identities=14% Similarity=0.179 Sum_probs=76.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~d-------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGL----GSETHLVIRGETVL----------R-----KFD-------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------T-----TSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCceEEEEeCCccc----------c-----ccC--------------------
Confidence 35799999999999999999996 89999999987541 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+...+.+.+++.| ++++++++|++++..
T Consensus 226 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~------------- 255 (479)
T 2hqm_A 226 ------------------------------------ECIQNTITDHYVKEG-INVHKLSKIVKVEKN------------- 255 (479)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHT-CEEECSCCEEEEEEC-------------
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-eEEEeCCEEEEEEEc-------------
Confidence 112235556666667 999999999999750
Q ss_pred cccccccCCeeEEEcCCC-cEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDG-TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g-~~~~ad~vV~AdG~~S~v 250 (515)
+++..+.+.+++| +++.+|.||.|.|.....
T Consensus 256 -----~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 256 -----VETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -----C-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred -----CCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 0112367888888 789999999999986654
No 191
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.10 E-value=1.5e-05 Score=82.86 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=77.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 215 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL----GIDSYIFARGNRIL----------R-----KF--------------------- 215 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT----TCEEEEECSSSSSC----------T-----TS---------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHc----CCeEEEEecCCccC----------c-----cc---------------------
Confidence 45899999999999999999996 89999999987540 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-..+...+.+.+++.| ++++++++|++++.
T Consensus 216 -----------------------------------d~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 245 (500)
T 1onf_A 216 -----------------------------------DESVINVLENDMKKNN-INIVTFADVVEIKK-------------- 245 (500)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------
T ss_pred -----------------------------------chhhHHHHHHHHHhCC-CEEEECCEEEEEEE--------------
Confidence 0123345666777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcE-EEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTS-LYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~-~~ad~vV~AdG~~S~v 250 (515)
+.+..+.+.+.+|++ +.+|.||.|.|.....
T Consensus 246 -----~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 246 -----VSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp -----SSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred -----cCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 011236788888887 9999999999987654
No 192
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.10 E-value=1e-05 Score=84.17 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=78.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+++|+.+.+. . .+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL----GVPVTVVASQDHVL----------P-----YE--------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT----TCCEEEECSSSSSS----------C-----CS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEcCCccc----------c-----cc---------------------
Confidence 35799999999999999999996 89999999987540 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-..+...+.+.+++.| ++|+++++|++++.
T Consensus 222 -----------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~V~~i~~-------------- 251 (499)
T 1xdi_A 222 -----------------------------------DADAALVLEESFAERG-VRLFKNARAASVTR-------------- 251 (499)
T ss_dssp -----------------------------------SHHHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 0124456677777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
++..+.+.+.+|+++.+|.||.|.|.++..
T Consensus 252 ------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 252 ------TGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred ------eCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 233477888888899999999999987654
No 193
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.10 E-value=2.2e-05 Score=79.30 Aligned_cols=108 Identities=23% Similarity=0.325 Sum_probs=81.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
.+|+|||||+.|+-+|..|++. |.+|+++|+.+.+....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~----g~~Vtvv~~~~~~~~~~------------------------------------- 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK----GLEVDVVELAPRVMARV------------------------------------- 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSTTTTT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCCcchhhc-------------------------------------
Confidence 5799999999999999999996 89999999887541000
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
....+...+.+.+++.| ++++++++|++++.
T Consensus 182 ---------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------- 212 (404)
T 3fg2_P 182 ---------------------------------VTPEISSYFHDRHSGAG-IRMHYGVRATEIAA--------------- 212 (404)
T ss_dssp ---------------------------------SCHHHHHHHHHHHHHTT-CEEECSCCEEEEEE---------------
T ss_pred ---------------------------------cCHHHHHHHHHHHHhCC-cEEEECCEEEEEEe---------------
Confidence 01235566777777887 99999999999975
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCch--hhhhcCCc
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR--VRELAGFK 257 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~--vr~~l~~~ 257 (515)
+++....|.+++|+++.||.||.|.|.... +-+.+++.
T Consensus 213 ----~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 213 ----EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp ----ETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred ----cCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCC
Confidence 122334588899999999999999998554 33344443
No 194
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.09 E-value=6.2e-06 Score=92.44 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=33.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+||+||||||||+++|+.|++. |++|+|||+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~----G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS----GARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCCCC
Confidence 58999999999999999999996 9999999998866
No 195
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.09 E-value=9e-06 Score=84.08 Aligned_cols=102 Identities=12% Similarity=0.318 Sum_probs=76.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+.. . +.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l~-~--------------~~-------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL----GSKVTVVEFQPQIGA-S--------------MD-------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSSS-S--------------SC--------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc----CCEEEEEEeCCcccc-c--------------cC--------------------
Confidence 45899999999999999999996 899999999886510 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+...+.+.+++.| ++++++++|++++. +
T Consensus 224 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~---------~---- 253 (478)
T 1v59_A 224 ------------------------------------GEVAKATQKFLKKQG-LDFKLSTKVISAKR---------N---- 253 (478)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEECSEEEEEEEE---------E----
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE---------e----
Confidence 345566777777787 99999999999964 0
Q ss_pred cccccccCCeeEEEcC-----CCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLS-----DGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~-----~g~~~~ad~vV~AdG~~S~v 250 (515)
+++..+.+.+. +++++.+|.||.|.|.....
T Consensus 254 -----~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 254 -----DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp -----TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred -----cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 01233556554 34579999999999987654
No 196
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.09 E-value=9e-06 Score=85.08 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=78.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
-+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~----G~~Vtlv~~~~~~l----------~-----~~---------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT----GRRTVMLVRTEPLK----------L-----IK---------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCTTT----------T-----CC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHc----CCeEEEEEecCccc----------c-----cc----------------------
Confidence 6899999999999999999996 89999999987540 0 00
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
...+...|.+.+++.| ++++++++|++++..
T Consensus 254 ----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~V~~i~~~-------------- 284 (523)
T 1mo9_A 254 ----------------------------------DNETRAYVLDRMKEQG-MEIISGSNVTRIEED-------------- 284 (523)
T ss_dssp ----------------------------------SHHHHHHHHHHHHHTT-CEEESSCEEEEEEEC--------------
T ss_pred ----------------------------------cHHHHHHHHHHHHhCC-cEEEECCEEEEEEEc--------------
Confidence 0133466777777888 999999999999750
Q ss_pred ccccccCCe---eEEEcCCCc-EEEeeEEEEecCCCchh
Q 010200 216 TTLFTKGHL---AKLDLSDGT-SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 216 ~~~~~~~~~---~~v~~~~g~-~~~ad~vV~AdG~~S~v 250 (515)
.+.. +.|.+.+|+ ++.+|.||.|.|.++..
T Consensus 285 -----~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 285 -----ANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp -----TTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred -----CCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 1122 678888887 89999999999987764
No 197
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.08 E-value=6.7e-06 Score=85.60 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC-CC-CCCcEE---EeCHhHHHHHHHcCCc
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKE-DP-PDPRVS---TVTPATISFFKEIGAW 127 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~-~~-~~~~~~---~l~~~~~~~l~~lgl~ 127 (515)
...+||+|||||++||++|+.|++. |++|+|||+.+.++.+...... +. ...... ...+...++++++|+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIH----GLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLR 86 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTT----SCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCc
Confidence 3468999999999999999999996 9999999999987543210000 00 000000 1246778899999986
Q ss_pred hh
Q 010200 128 QY 129 (515)
Q Consensus 128 ~~ 129 (515)
+.
T Consensus 87 ~~ 88 (504)
T 1sez_A 87 EK 88 (504)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 198
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.07 E-value=7.3e-06 Score=83.73 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+||||||||||+++|..|++.+ ...+|+|+|+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g--~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLD--KESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHC--SSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCC--CCCcEEEEeCCCCC
Confidence 6999999999999999999873 24689999998754
No 199
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.06 E-value=1.8e-05 Score=81.65 Aligned_cols=100 Identities=17% Similarity=0.405 Sum_probs=75.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. +. +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~~-----~--------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL----GAEVTVVEFAPRCA----------PT-----L--------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------TT-----S---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHh----CCEEEEEecCCccc----------cc-----C---------------------
Confidence 45899999999999999999996 89999999987541 00 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHH-hcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCM-QNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
..++...+.+.+ ++.| ++++++++|++++.
T Consensus 214 -----------------------------------d~~~~~~l~~~l~~~~g-v~i~~~~~v~~i~~------------- 244 (468)
T 2qae_A 214 -----------------------------------DEDVTNALVGALAKNEK-MKFMTSTKVVGGTN------------- 244 (468)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHTC-CEEECSCEEEEEEE-------------
T ss_pred -----------------------------------CHHHHHHHHHHHhhcCC-cEEEeCCEEEEEEE-------------
Confidence 023445667777 7777 99999999999975
Q ss_pred CcccccccCCeeEEEcC--CC--cEEEeeEEEEecCCCchh
Q 010200 214 SATTLFTKGHLAKLDLS--DG--TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~--~g--~~~~ad~vV~AdG~~S~v 250 (515)
+++.+.+.+. +| +++.+|.||.|.|..+..
T Consensus 245 -------~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 245 -------NGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp -------CSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred -------cCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 2233566654 66 579999999999987654
No 200
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.06 E-value=3.4e-06 Score=83.81 Aligned_cols=40 Identities=23% Similarity=0.420 Sum_probs=35.6
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC-CCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN-PALG 95 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~-~~~~ 95 (515)
+...+||+|||||++||++|+.|++. |++|+|||+. ..++
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~----G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRA----GHDVTILEANANRVG 81 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHT----SCEEEEECSCSSCCB
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHC----CCcEEEEeccccccC
Confidence 34568999999999999999999996 9999999999 7663
No 201
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.06 E-value=8.2e-06 Score=84.49 Aligned_cols=100 Identities=10% Similarity=0.151 Sum_probs=77.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~----G~~Vtlv~~~~~~l----------~-----~~--------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL----GSRLDVVEMMDGLM----------Q-----GA--------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------T-----TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEECCccc----------c-----cc---------------------
Confidence 46899999999999999999996 89999999987541 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-.++...+.+.+++.| ++++++++|.+++.
T Consensus 225 -----------------------------------~~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~-------------- 254 (482)
T 1ojt_A 225 -----------------------------------DRDLVKVWQKQNEYRF-DNIMVNTKTVAVEP-------------- 254 (482)
T ss_dssp -----------------------------------CHHHHHHHHHHHGGGE-EEEECSCEEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhcC-CEEEECCEEEEEEE--------------
Confidence 0133455667777777 99999999999975
Q ss_pred cccccccCCeeEEEcCC----CcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSD----GTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~----g~~~~ad~vV~AdG~~S~v 250 (515)
++..+.+.+.+ |+++.+|.||.|.|.....
T Consensus 255 ------~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 255 ------KEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ------ETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred ------cCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 22346666666 6789999999999987654
No 202
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.05 E-value=2.8e-05 Score=80.30 Aligned_cols=101 Identities=12% Similarity=0.198 Sum_probs=76.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . + .
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~--~--~---------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL----GADVTAVEFLGHVG----------G--V--G---------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------C--S--S----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc----CCEEEEEeccCccC----------C--c--c----------------------
Confidence 35899999999999999999996 89999999987541 0 0 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
+ ..++...+.+.+++.| ++++++++|++++.
T Consensus 218 -------------------~---------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 248 (474)
T 1zmd_A 218 -------------------I---------------DMEISKNFQRILQKQG-FKFKLNTKVTGATK-------------- 248 (474)
T ss_dssp -------------------C---------------CHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------
T ss_pred -------------------c---------------CHHHHHHHHHHHHHCC-CEEEeCceEEEEEE--------------
Confidence 0 1234456777777777 99999999999975
Q ss_pred cccccccCCe-eEEEc-----CCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHL-AKLDL-----SDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~-~~v~~-----~~g~~~~ad~vV~AdG~~S~v 250 (515)
++.. +.+.+ .+++++.+|.||.|.|.....
T Consensus 249 ------~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 249 ------KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp ------CTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred ------cCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 2222 55553 456689999999999986543
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.00 E-value=3.3e-05 Score=80.11 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=78.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++.. .+|.+|+|+|+.+.+. .. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~-~~g~~Vtlv~~~~~~l----------~~-----~--------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK-ARGGQVDLAYRGDMIL----------RG-----F--------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS-CTTCEEEEEESSSSSS----------TT-----S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc-cCcCeEEEEEcCCCcc----------cc-----c---------------------
Confidence 358999999999999999998830 0188999999987540 00 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-..+...|.+.+++.| ++|+++++|++++.
T Consensus 230 -----------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 259 (490)
T 1fec_A 230 -----------------------------------DSELRKQLTEQLRANG-INVRTHENPAKVTK-------------- 259 (490)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-EEEEETCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------
Confidence 0134456777777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
+.+..+.+.+.+|+++.+|.||.|.|.....
T Consensus 260 -----~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 260 -----NADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp -----CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----cCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 0113467888888889999999999987654
No 204
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.99 E-value=4.8e-06 Score=84.66 Aligned_cols=40 Identities=20% Similarity=0.389 Sum_probs=35.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCC-cEEEEEcCCCCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPALGKS 97 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G-~~V~v~E~~~~~~~~ 97 (515)
+++||+|||||++||++|+.|++. | ++|+|||+.+.++.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~----g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA----GFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCcEEEEECCCCCCCc
Confidence 468999999999999999999996 8 899999999887543
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=1.3e-05 Score=79.97 Aligned_cols=93 Identities=22% Similarity=0.276 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
.+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. . +.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~------~~--------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA----GYHVKLIHRGAMFL----------G------LD--------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT----TCEEEEECSSSCCT----------T------CC---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCCeec----------c------CC---------------------
Confidence 5799999999999999999996 89999999987541 0 00
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
.++.+.+.+.+++.| ++++++++|++++.
T Consensus 183 -----------------------------------~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~--------------- 211 (367)
T 1xhc_A 183 -----------------------------------EELSNMIKDMLEETG-VKFFLNSELLEANE--------------- 211 (367)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTT-EEEECSCCEEEECS---------------
T ss_pred -----------------------------------HHHHHHHHHHHHHCC-CEEEcCCEEEEEEe---------------
Confidence 134456677777777 99999999999842
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
. .+.+++|+ +.+|.||.|.|.....
T Consensus 212 -------~--~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 212 -------E--GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp -------S--EEEETTEE-EECSCEEEECCEEECC
T ss_pred -------e--EEEECCCE-EEcCEEEECcCCCcCH
Confidence 2 35667887 9999999999976543
No 206
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.99 E-value=2.9e-05 Score=78.45 Aligned_cols=96 Identities=22% Similarity=0.305 Sum_probs=74.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~~------------------------------------- 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA----GVHVSLVETQPRLMSR------------------------------------- 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSSTT-------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCEEEEEEeCCccccc-------------------------------------
Confidence 46899999999999999999996 8999999998754100
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. ....+...+.+.+++.| ++++.+++|++++.
T Consensus 184 --~-------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 215 (408)
T 2gqw_A 184 --A-------------------------------APATLADFVARYHAAQG-VDLRFERSVTGSVD-------------- 215 (408)
T ss_dssp --T-------------------------------SCHHHHHHHHHHHHHTT-CEEEESCCEEEEET--------------
T ss_pred --c-------------------------------cCHHHHHHHHHHHHHcC-cEEEeCCEEEEEEC--------------
Confidence 0 00134456667777777 99999999999842
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
+ .+.+.+|+++.+|.||.|.|....
T Consensus 216 --------~--~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 216 --------G--VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp --------T--EEEETTSCEEECSEEEECSCEEEC
T ss_pred --------C--EEEECCCCEEEcCEEEECcCCCcc
Confidence 2 566788889999999999997643
No 207
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.99 E-value=2.2e-05 Score=80.85 Aligned_cols=100 Identities=20% Similarity=0.304 Sum_probs=74.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. + .+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~~-------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNY----GVDVTIVEFLPRAL----------P-----NED-------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc----CCeEEEEEcCCccc----------c-----ccC--------------------
Confidence 35899999999999999999996 89999999987540 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
.++...+.+.+++.| ++++++++|++++.
T Consensus 212 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 240 (464)
T 2a8x_A 212 ------------------------------------ADVSKEIEKQFKKLG-VTILTATKVESIAD-------------- 240 (464)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHT-CEEECSCEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHcC-CEEEeCcEEEEEEE--------------
Confidence 123344566666667 99999999999975
Q ss_pred cccccccCCeeEEEcC-CC--cEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLS-DG--TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~-~g--~~~~ad~vV~AdG~~S~v 250 (515)
++..+.+.+. +| +++.+|.||.|.|.....
T Consensus 241 ------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 241 ------GGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp ------CSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred ------cCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 2233666664 56 579999999999976543
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=1.2e-05 Score=82.62 Aligned_cols=98 Identities=18% Similarity=0.263 Sum_probs=73.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. + .+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~~-------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKL----GAQVSVVEARERIL----------P-----TYD-------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC----CCeEEEEEcCCccc----------c-----ccC--------------------
Confidence 35899999999999999999996 89999999987541 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+...+.+.+++.| ++++++++|++++.
T Consensus 212 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 240 (458)
T 1lvl_A 212 ------------------------------------SELTAPVAESLKKLG-IALHLGHSVEGYEN-------------- 240 (458)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHT-CEEETTCEEEEEET--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEECCEEEEEEe--------------
Confidence 123345566666667 99999999999852
Q ss_pred cccccccCCeeEEEcCCC--cEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g--~~~~ad~vV~AdG~~S~v 250 (515)
+.+.+...+| +++.+|.||.|+|.....
T Consensus 241 --------~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 241 --------GCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp --------TEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred --------CCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 2255654456 589999999999986554
No 209
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.98 E-value=3.4e-05 Score=79.62 Aligned_cols=101 Identities=20% Similarity=0.267 Sum_probs=78.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||+.|+-+|..|++. .|.+|+++|+.+.+... .
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~---~g~~Vtlv~~~~~~l~~---------~--------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADM---WGIDTTVVELADQIMPG---------F--------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH---HCCEEEEECSSSSSSTT---------T---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh---cCCcEEEEEccCccccc---------c---------------------------
Confidence 45899999999999999999983 17899999988744100 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
....+...|.+.+++.| ++++++++|++++.
T Consensus 200 ----------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 230 (472)
T 3iwa_A 200 ----------------------------------TSKSLSQMLRHDLEKND-VVVHTGEKVVRLEG-------------- 230 (472)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------
T ss_pred ----------------------------------cCHHHHHHHHHHHHhcC-CEEEeCCEEEEEEc--------------
Confidence 01245566777777887 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.+..+++.+.+|+++.+|.||.|.|....
T Consensus 231 ------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 231 ------ENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp ------SSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred ------cCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 33557788888989999999999998653
No 210
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.98 E-value=1.1e-05 Score=83.21 Aligned_cols=100 Identities=15% Similarity=0.317 Sum_probs=75.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. .. +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtli~~~~~~l----------~~-----~--------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRI----GSEVTVVEFASEIV----------PT-----M--------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------TT-----S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCcEEEEEcCCccc----------cc-----c---------------------
Confidence 45899999999999999999996 89999999987541 00 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
...+.+.+.+.+++.| ++++++++|++++.
T Consensus 217 -----------------------------------~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 246 (470)
T 1dxl_A 217 -----------------------------------DAEIRKQFQRSLEKQG-MKFKLKTKVVGVDT-------------- 246 (470)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHSS-CCEECSEEEEEEEC--------------
T ss_pred -----------------------------------cHHHHHHHHHHHHHcC-CEEEeCCEEEEEEE--------------
Confidence 0134455677777777 99999999999975
Q ss_pred cccccccCCeeEEEcC---CC--cEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLS---DG--TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~---~g--~~~~ad~vV~AdG~~S~v 250 (515)
++..+.+.+. +| +++.+|.||.|.|.....
T Consensus 247 ------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 247 ------SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp ------SSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred ------cCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 2233555554 44 579999999999987653
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.98 E-value=4.5e-05 Score=78.19 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=77.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+...
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~~------------------------------------- 185 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKM----KKTVHVFESLENLLPK------------------------------------- 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSSTT-------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCeEEEEEccCccccc-------------------------------------
Confidence 35799999999999999999996 8999999998754100
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. + -..+...+.+.+++.| ++++++++|++++.
T Consensus 186 --~----------------~---------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 217 (452)
T 3oc4_A 186 --Y----------------F---------------DKEMVAEVQKSLEKQA-VIFHFEETVLGIEE-------------- 217 (452)
T ss_dssp --T----------------C---------------CHHHHHHHHHHHHTTT-EEEEETCCEEEEEE--------------
T ss_pred --c----------------C---------------CHHHHHHHHHHHHHcC-CEEEeCCEEEEEEc--------------
Confidence 0 0 0234566777778887 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.++.+.+.+++| ++.+|.||.|.|....
T Consensus 218 ------~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 218 ------TANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp ------CSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred ------cCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 234457777777 8999999999998654
No 212
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.98 E-value=4.4e-05 Score=79.28 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=33.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..++.+|||||||+||+++|..|++. +++|+|+|+++.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~----~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTK----KYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTT----TCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhC----CCcEEEECCCCC
Confidence 34456899999999999999999985 899999999873
No 213
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.98 E-value=5.9e-05 Score=77.31 Aligned_cols=100 Identities=17% Similarity=0.286 Sum_probs=75.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~~------------------------------------- 187 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ----NYNVNLIDGHERVLYK------------------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSTTTT-------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhc----CCEEEEEEcCCchhhh-------------------------------------
Confidence 35799999999999999999996 8999999998754100
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
.+ -..+...+.+.+++.| ++++++++|++++.
T Consensus 188 --~~-------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 219 (452)
T 2cdu_A 188 --YF-------------------------------DKEFTDILAKDYEAHG-VNLVLGSKVAAFEE-------------- 219 (452)
T ss_dssp --TS-------------------------------CHHHHHHHHHHHHHTT-CEEEESSCEEEEEE--------------
T ss_pred --hh-------------------------------hhhHHHHHHHHHHHCC-CEEEcCCeeEEEEc--------------
Confidence 00 0124456677777787 99999999999964
Q ss_pred cccccccCCeeE-EEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAK-LDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
.++.+. +.+ +|+++.+|.||.|.|.....
T Consensus 220 ------~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 220 ------VDDEIITKTL-DGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp ------ETTEEEEEET-TSCEEEESEEEECCCEEECC
T ss_pred ------CCCeEEEEEe-CCCEEECCEEEECcCCCCCH
Confidence 223343 444 77889999999999976543
No 214
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.97 E-value=2.6e-05 Score=80.94 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=77.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||..|+-+|..|++... +|.+|+|+|+.+.+. . .+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~-~g~~Vtlv~~~~~~l----------~-----~~--------------------- 233 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKP-PGGKVTLCYRNNLIL----------R-----GF--------------------- 233 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCC-TTCEEEEEESSSSSC----------T-----TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC-CCCeEEEEEcCCccc----------c-----cc---------------------
Confidence 3589999999999999999988300 188999999987540 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-.++...|.+.+++.| ++++++++|++++.
T Consensus 234 -----------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 263 (495)
T 2wpf_A 234 -----------------------------------DETIREEVTKQLTANG-IEIMTNENPAKVSL-------------- 263 (495)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------
Confidence 0123355666777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
+.+..+.+.+.+|+++.+|.||.|.|.....
T Consensus 264 -----~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 264 -----NTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp -----CTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred -----cCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 1113467888889899999999999986554
No 215
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.97 E-value=6.9e-05 Score=72.70 Aligned_cols=98 Identities=21% Similarity=0.222 Sum_probs=71.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||+|++|+-+|..|++. |.+|+++++.+.+. . .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~~----------~-------~-------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI----ASEVHLIHRRDGFR----------A-------E-------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSSCC----------C-------C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCeEEEEEeCCccc----------c-------C--------------------
Confidence 35799999999999999999996 89999999876430 0 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 184 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 212 (320)
T 1trb_A 184 ------------------------------------KILIKRLMDKVENGN-IILHTNRTLEEVTG-------------- 212 (320)
T ss_dssp ------------------------------------HHHHHHHHHHHHTSS-EEEECSCEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHhcccCC-eEEEcCceeEEEEc--------------
Confidence 123345666777777 99999999999975
Q ss_pred cccccccCCeeEEEcCC----C--cEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSD----G--TSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~----g--~~~~ad~vV~AdG~~S~ 249 (515)
+.+....+.+.+ | .++.+|.||.|.|....
T Consensus 213 -----~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 213 -----DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp -----CSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred -----CCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 011222244433 4 47999999999996543
No 216
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.96 E-value=3.7e-05 Score=78.31 Aligned_cols=103 Identities=16% Similarity=0.252 Sum_probs=76.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~----G~~Vtlv~~~~~~l----------~----------------------~----- 187 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA----NMHVTLLDTAARVL----------E----------------------R----- 187 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSTT----------T----------------------T-----
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCEEEEEEeCCccc----------c----------------------c-----
Confidence 45799999999999999999996 89999999877440 0 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. ....+...+.+.+++.| ++++++++|++++. . +
T Consensus 188 --~-------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~---------~--~- 221 (431)
T 1q1r_A 188 --V-------------------------------TAPPVSAFYEHLHREAG-VDIRTGTQVCGFEM---------S--T- 221 (431)
T ss_dssp --T-------------------------------SCHHHHHHHHHHHHHHT-CEEECSCCEEEEEE---------C--T-
T ss_pred --h-------------------------------hhHHHHHHHHHHHHhCC-eEEEeCCEEEEEEe---------c--c-
Confidence 0 00134455666677777 99999999999863 0 0
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
+++....+.+.+|+++.+|.||.|.|....
T Consensus 222 -----~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 222 -----DQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp -----TTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred -----CCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 012233677889989999999999997643
No 217
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.95 E-value=2.7e-05 Score=80.26 Aligned_cols=98 Identities=15% Similarity=0.181 Sum_probs=76.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . +.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~------~~-------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL----GSKVTVLARNTLFF----------R------ED-------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCTTT----------T------SC--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc----CCEEEEEEECCccC----------C------CC--------------------
Confidence 35799999999999999999996 89999999987540 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+...+.+.+++.| ++++.+++|++++.
T Consensus 216 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 244 (467)
T 1zk7_A 216 ------------------------------------PAIGEAVTAAFRAEG-IEVLEHTQASQVAH-------------- 244 (467)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------
Confidence 234456777777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~v 250 (515)
++..+.+.++ +.++.+|.||.|.|.++..
T Consensus 245 ------~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 245 ------MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp ------ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred ------eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 3344566665 4579999999999987664
No 218
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.95 E-value=4.9e-06 Score=83.97 Aligned_cols=42 Identities=26% Similarity=0.574 Sum_probs=36.3
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~ 97 (515)
..++||+|||||++||++|+.|++. .|++|+|+|+++.++..
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~---~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQ---LDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHH---SCCCEEEECSSSSSSGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHh---CCCCEEEEeCCCCCCCe
Confidence 3468999999999999999999994 28999999999877543
No 219
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.94 E-value=6.3e-06 Score=82.56 Aligned_cols=40 Identities=38% Similarity=0.610 Sum_probs=36.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
....+||+|||||++||++|+.|++. |++|+|+|+++.++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~----g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASS----GQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHC----CCceEEEeccCCCC
Confidence 34579999999999999999999996 99999999988775
No 220
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.93 E-value=3.6e-05 Score=81.28 Aligned_cols=117 Identities=16% Similarity=0.224 Sum_probs=79.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
-+|+|||||+.|+-+|..|++. |.+|+++|+.+.+. . .+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~---------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL----GIKTTLLELADQVM----------T-----PV---------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSC----------T-----TS----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCcEEEEEcCCccc----------h-----hc----------------------
Confidence 4799999999999999999996 89999999987541 0 00
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
...+...+.+.+++.| ++++++++|++++................
T Consensus 191 ----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 235 (565)
T 3ntd_A 191 ----------------------------------DREMAGFAHQAIRDQG-VDLRLGTALSEVSYQVQTHVASDAAGEDT 235 (565)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHTT-CEEEETCCEEEEEEECCCCCCCGGGTCCC
T ss_pred ----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCeEEEEecccccccccccccccc
Confidence 0123455666677777 99999999999975211111111000000
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
. .......+++.+.+|+++.+|.||.|.|....
T Consensus 236 ~-~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 236 A-HQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp T-TCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred c-cccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 0 00023557788888989999999999998654
No 221
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.93 E-value=4.6e-05 Score=78.81 Aligned_cols=99 Identities=16% Similarity=0.290 Sum_probs=74.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhh
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (515)
...+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~-------------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVEL----GKKVRMIERNDHIG----------T-----IY-------------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHT----TCEEEEECCGGGTT----------S-----SS--------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc----CCeEEEEEeCCchh----------h-----cC--------------------
Confidence 346899999999999999999996 89999999887541 0 00
Q ss_pred hccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCC
Q 010200 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (515)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~ 213 (515)
...+...+.+.+++.| ++++++++|++++.
T Consensus 226 ------------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~------------- 255 (480)
T 3cgb_A 226 ------------------------------------DGDMAEYIYKEADKHH-IEILTNENVKAFKG------------- 255 (480)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------
T ss_pred ------------------------------------CHHHHHHHHHHHHHcC-cEEEcCCEEEEEEc-------------
Confidence 0234566777777787 99999999999975
Q ss_pred CcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 214 SATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
++....+.++ +.++.+|.||.|.|....
T Consensus 256 -------~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 256 -------NERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp -------SSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred -------CCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 2222234444 457999999999998654
No 222
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.92 E-value=4.2e-05 Score=79.31 Aligned_cols=98 Identities=18% Similarity=0.211 Sum_probs=74.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~d-------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRL----GVIVKVFGRSGSVA----------N-----LQD-------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHT----TCEEEEECCTTCCT----------T-----CCC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEECCccc----------c-----cCC--------------------
Confidence 45799999999999999999996 89999999988551 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+.+.+.+.+++. ++++++++|++++.
T Consensus 215 ------------------------------------~~~~~~l~~~l~~~--V~i~~~~~v~~i~~-------------- 242 (492)
T 3ic9_A 215 ------------------------------------EEMKRYAEKTFNEE--FYFDAKARVISTIE-------------- 242 (492)
T ss_dssp ------------------------------------HHHHHHHHHHHHTT--SEEETTCEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHhhC--cEEEECCEEEEEEE--------------
Confidence 03445555655553 89999999999976
Q ss_pred cccccccCCeeEEEcC--CC--cEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLS--DG--TSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~--~g--~~~~ad~vV~AdG~~S~ 249 (515)
.++.+.+.+. +| .++.+|.||.|.|....
T Consensus 243 ------~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 243 ------KEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ------CSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred ------cCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 3344666664 67 57999999999998654
No 223
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.92 E-value=6.8e-05 Score=77.72 Aligned_cols=99 Identities=23% Similarity=0.306 Sum_probs=74.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l~~------------------------------------- 232 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRK----GKEVVLIDVVDTCLAG------------------------------------- 232 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTTTT-------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC----CCeEEEEEcccchhhh-------------------------------------
Confidence 45799999999999999999996 8999999998754100
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
. + -.++...+.+.+++.| ++++++++|++++.
T Consensus 233 --~----------------~---------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 264 (490)
T 2bc0_A 233 --Y----------------Y---------------DRDLTDLMAKNMEEHG-IQLAFGETVKEVAG-------------- 264 (490)
T ss_dssp --T----------------S---------------CHHHHHHHHHHHHTTT-CEEEETCCEEEEEC--------------
T ss_pred --H----------------H---------------HHHHHHHHHHHHHhCC-eEEEeCCEEEEEEc--------------
Confidence 0 0 0234456777788887 99999999999964
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
++....+.+ +|+++.+|.||.|.|....
T Consensus 265 ------~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 265 ------NGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ------SSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred ------CCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 112223444 6778999999999997654
No 224
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.91 E-value=2.9e-05 Score=80.52 Aligned_cols=100 Identities=22% Similarity=0.305 Sum_probs=75.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~d-------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARL----GAKVTVVEFLDTIL----------G-----GMD-------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------S-----SSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCEEEEEecccccc----------c-----cCC--------------------
Confidence 45799999999999999999996 89999999887541 0 000
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
..+.+.+.+.+++.| ++++.+++|++++.
T Consensus 239 ------------------------------------~~~~~~l~~~l~~~g-V~v~~~~~v~~i~~-------------- 267 (491)
T 3urh_A 239 ------------------------------------GEVAKQLQRMLTKQG-IDFKLGAKVTGAVK-------------- 267 (491)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-CEEEECCeEEEEEE--------------
Confidence 234455667777777 99999999999976
Q ss_pred cccccccCCeeEEEcCC---C--cEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~---g--~~~~ad~vV~AdG~~S~v 250 (515)
.+..+.+.+.+ | +++.+|.||.|.|.....
T Consensus 268 ------~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 268 ------SGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp ------ETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred ------eCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 33445565542 4 479999999999986543
No 225
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.89 E-value=7.9e-05 Score=77.27 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=75.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
-+|+|||||..|+-+|..|++.+...|.+|+++++.+.+.. .
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~--------------------------------~------ 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG--------------------------------K------ 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT--------------------------------T------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc--------------------------------c------
Confidence 57999999999999999997621001688999987753200 0
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
.+ ...+...+.+.+++.| ++++++++|++++.
T Consensus 223 -~l-------------------------------~~~~~~~~~~~l~~~G-V~v~~~~~V~~i~~--------------- 254 (493)
T 1m6i_A 223 -IL-------------------------------PEYLSNWTMEKVRREG-VKVMPNAIVQSVGV--------------- 254 (493)
T ss_dssp -TS-------------------------------CHHHHHHHHHHHHTTT-CEEECSCCEEEEEE---------------
T ss_pred -cC-------------------------------CHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe---------------
Confidence 00 0134455667777887 99999999999975
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.+..+.+.+.+|+++.+|+||.|.|....
T Consensus 255 -----~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 255 -----SSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp -----ETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred -----cCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 23456788889999999999999997654
No 226
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.86 E-value=5.4e-05 Score=78.15 Aligned_cols=100 Identities=17% Similarity=0.294 Sum_probs=75.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+. . .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL----GAEVTVLEAMDKFL----------P-----AV--------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T-----TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCcEEEEecCCCcC----------c-----cc---------------------
Confidence 45799999999999999999996 89999999987440 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-..+...+.+.+++.| ++++.+++|++++.
T Consensus 220 -----------------------------------~~~~~~~l~~~l~~~G-v~v~~~~~v~~i~~-------------- 249 (476)
T 3lad_A 220 -----------------------------------DEQVAKEAQKILTKQG-LKILLGARVTGTEV-------------- 249 (476)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-EEEEETCEEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------
Confidence 0124456666777777 99999999999976
Q ss_pred cccccccCCeeEEEcCCC---cEEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKGHLAKLDLSDG---TSLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g---~~~~ad~vV~AdG~~S~v 250 (515)
.+..+.+.+.++ +++.+|.||.|.|.....
T Consensus 250 ------~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 250 ------KNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp ------CSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred ------cCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 334456666544 579999999999976543
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.84 E-value=0.00012 Score=71.64 Aligned_cols=36 Identities=25% Similarity=0.408 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||||..|+-+|..|++. |.+|+++++.+.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~----g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT----ARRITLIHRRPQF 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhh----CCEEEEEEcCCcc
Confidence 35899999999999999999996 8999999987743
No 228
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.80 E-value=1.7e-05 Score=79.48 Aligned_cols=37 Identities=30% Similarity=0.491 Sum_probs=34.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
++||+|||||++|+++|+.|++. |++|+|+|+++.++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~----g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK----GHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCcEEEEEecCCcC
Confidence 47999999999999999999996 89999999998775
No 229
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.80 E-value=1.4e-05 Score=79.71 Aligned_cols=37 Identities=30% Similarity=0.574 Sum_probs=33.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
+||+|||||++||++|+.|++. |++|+|+|+++.++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~----g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL----NKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG----TCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCcEEEEecCCCCCc
Confidence 7999999999999999999996 899999999987653
No 230
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.77 E-value=1.5e-05 Score=85.03 Aligned_cols=39 Identities=33% Similarity=0.480 Sum_probs=34.4
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~ 95 (515)
...+||+|||||++|+++|+.|++. |++|+|+|+....+
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~----G~~V~liE~~~~~g 82 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGA----GYKVAMFDIGEIDS 82 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCCCS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhC----CCcEEEEeccCCCC
Confidence 3569999999999999999999996 99999999988664
No 231
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.76 E-value=7.5e-05 Score=76.15 Aligned_cols=93 Identities=15% Similarity=0.246 Sum_probs=71.7
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. .
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~ll-----------------------------~---------- 184 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER----GLHPTLIHRSDKIN-----------------------------K---------- 184 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCEEEEEESSSCCS-----------------------------T----------
T ss_pred cEEEEECCccchhhhHHHHHhc----CCcceeeeeecccc-----------------------------c----------
Confidence 4799999999999999999996 99999999987541 0
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
..+ .++.+.+.+.+++.| ++++.+++|++++.
T Consensus 185 -~~d-------------------------------~~~~~~~~~~l~~~g-V~i~~~~~v~~~~~--------------- 216 (437)
T 4eqs_A 185 -LMD-------------------------------ADMNQPILDELDKRE-IPYRLNEEINAING--------------- 216 (437)
T ss_dssp -TSC-------------------------------GGGGHHHHHHHHHTT-CCEEESCCEEEEET---------------
T ss_pred -ccc-------------------------------chhHHHHHHHhhccc-eEEEeccEEEEecC---------------
Confidence 000 011134566667777 99999999998853
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCc
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S 248 (515)
..+.+++|+++.+|.||.|.|...
T Consensus 217 ---------~~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 217 ---------NEITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp ---------TEEEETTSCEEECSEEEECCCEEE
T ss_pred ---------CeeeecCCeEEeeeeEEEEeceec
Confidence 246678999999999999999643
No 232
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.74 E-value=8.6e-05 Score=78.80 Aligned_cols=97 Identities=15% Similarity=0.372 Sum_probs=75.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+. . .+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER----GIEVTLVEMANQVM----------P-----PI--------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------T-----TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEecCCccc----------c-----cC---------------------
Confidence 35799999999999999999996 89999999887541 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-..+...+.+.+++.| ++++.+++|++++.
T Consensus 227 -----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 256 (588)
T 3ics_A 227 -----------------------------------DYEMAAYVHEHMKNHD-VELVFEDGVDALEE-------------- 256 (588)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEG--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHcC-CEEEECCeEEEEec--------------
Confidence 0123455667777777 99999999999965
Q ss_pred cccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.+. .+.+.+|+++.+|.||.|.|....
T Consensus 257 ------~~~--~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 257 ------NGA--VVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp ------GGT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ------CCC--EEEECCCCEEEcCEEEEccCCCCC
Confidence 222 466778889999999999998654
No 233
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.74 E-value=0.00011 Score=75.80 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=74.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||..|+-+|..|++. |.+|+|+++.+.+. . ..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~------------------~~-------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSAL----GSKTSLMIRHDKVL----------R------------------SF-------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------T------------------TS--------
T ss_pred CccEEEECCCHHHHHHHHHHHHc----CCeEEEEEeCCccc----------c------------------cc--------
Confidence 35799999999999999999996 89999999887541 0 00
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-..+.+.+.+.+++.| ++++.+++|++++..
T Consensus 227 -----------------------------------d~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~------------- 257 (478)
T 3dk9_A 227 -----------------------------------DSMISTNCTEELENAG-VEVLKFSQVKEVKKT------------- 257 (478)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEETTEEEEEEEEC-------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEEc-------------
Confidence 0123355666777777 999999999999750
Q ss_pred cccccccCCeeEEEcCC---C----cEEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSD---G----TSLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~---g----~~~~ad~vV~AdG~~S~ 249 (515)
+++..+.+.+.+ | .++.+|.||.|.|....
T Consensus 258 -----~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 258 -----LSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp -----SSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred -----CCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 011136676665 2 57899999999997544
No 234
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.74 E-value=1.9e-05 Score=81.76 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=35.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCC-cEEEEEcCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPALGK 96 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G-~~V~v~E~~~~~~~ 96 (515)
++.+||+|||||++||++|+.|++. | .+|+|||+.+.++.
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~----g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL----GYKNWHLYECNDTPGG 47 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT----TCCSEEEEESSSSSSG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc----CCCCEEEEeCCCCCCC
Confidence 3568999999999999999999996 6 79999999987753
No 235
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.74 E-value=1.9e-05 Score=81.99 Aligned_cols=40 Identities=28% Similarity=0.491 Sum_probs=35.9
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
...+||+|||||++||++|+.|++. |++|+|+|+.+.++.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~----g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA----GHQVTVLEASERPGG 70 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH----TCEEEEECSSSSSBT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEECCCCCCC
Confidence 3468999999999999999999996 999999999987754
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.73 E-value=0.00011 Score=71.65 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|++|+-+|..|++. |.+|+++++.+.+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~----g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY----GSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEEcCCcc
Confidence 45799999999999999999996 8999999988754
No 237
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.72 E-value=2.2e-05 Score=80.40 Aligned_cols=38 Identities=26% Similarity=0.367 Sum_probs=34.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
...+||+||||||+||++|+.|++. |++|+|||+.+.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~----G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK----GYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC----CCeEEEEeccCCC
Confidence 3568999999999999999999996 9999999998765
No 238
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.70 E-value=0.00018 Score=74.36 Aligned_cols=99 Identities=15% Similarity=0.112 Sum_probs=73.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||..|+-+|..|++. |.+|+|+++.....
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~l~--------------------------------------- 223 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGL----GYEPTVMVRSIVLR--------------------------------------- 223 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSCSST---------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHc----CCEEEEEeCCCCCc---------------------------------------
Confidence 35799999999999999999996 89999999853220
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
.+ -.++...+.+.+++.| ++++++++|.+++.
T Consensus 224 --~~-------------------------------d~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 255 (483)
T 3dgh_A 224 --GF-------------------------------DQQMAELVAASMEERG-IPFLRKTVPLSVEK-------------- 255 (483)
T ss_dssp --TS-------------------------------CHHHHHHHHHHHHHTT-CCEEETEEEEEEEE--------------
T ss_pred --cc-------------------------------CHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------
Confidence 00 0134455677777777 99999999999975
Q ss_pred cccccccCCeeEEEcCCCc-----EEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSDGT-----SLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~-----~~~ad~vV~AdG~~S~ 249 (515)
+.+..+.+.+.++. ++.+|.||.|.|....
T Consensus 256 -----~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 256 -----QDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp -----CTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred -----cCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 11233556665543 7999999999997543
No 239
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.68 E-value=0.00012 Score=75.07 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=32.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||||.+|+=+|..|++.. +|.+|++++|.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~--~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSY--PSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC--TTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcC--CCCeEEEEEeCCCC
Confidence 468999999999999999999841 27899999998854
No 240
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.66 E-value=0.00023 Score=70.47 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=71.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
.+|+|||||.+|+-+|..|++. |.+|+++++.+... .+. +
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~----g~~V~lv~~~~~~~------------------~~~-------~----------- 206 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN----GSDIALYTSTTGLN------------------DPD-------A----------- 206 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEECC---------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhc----CCeEEEEecCCCCC------------------CCC-------C-----------
Confidence 4799999999999999999996 89999999887440 000 0
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
+. . .. -...+.+.+.+.+++.|+++++.+++|.+++.
T Consensus 207 ---------d~-~---~~---------------~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~--------------- 243 (369)
T 3d1c_A 207 ---------DP-S---VR---------------LSPYTRQRLGNVIKQGARIEMNVHYTVKDIDF--------------- 243 (369)
T ss_dssp ----------C-T---TS---------------CCHHHHHHHHHHHHTTCCEEEECSCCEEEEEE---------------
T ss_pred ---------CC-C---cc---------------CCHHHHHHHHHHHhhCCcEEEecCcEEEEEEe---------------
Confidence 00 0 00 01233455566666653399999999999964
Q ss_pred ccccccCCeeEEEcCCCcEEE-eeEEEEecCCCch
Q 010200 216 TTLFTKGHLAKLDLSDGTSLY-AKLVVGADGGKSR 249 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~-ad~vV~AdG~~S~ 249 (515)
.+..+.+.+.+|+++. +|.||.|+|....
T Consensus 244 -----~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 244 -----NNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp -----ETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred -----cCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 2345678888887665 5999999997654
No 241
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.65 E-value=0.00016 Score=71.57 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.-+|+|||+|++|+-+|..|++. |.+|+++++.+.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~----g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKN----AASVTLVHRGHEF 198 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT----SSEEEEECSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc----CCEEEEEEcCCCC
Confidence 35799999999999999999996 8999999987643
No 242
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.61 E-value=0.00046 Score=66.54 Aligned_cols=36 Identities=31% Similarity=0.414 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI----CKKVYLIHRRDGF 178 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEeeCCcc
Confidence 36899999999999999999996 8999999987644
No 243
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.57 E-value=0.00061 Score=66.18 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF----ADEVTVIHRRDTL 187 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCEEEEEeCCCcC
Confidence 5799999999999999999996 8999999987643
No 244
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.56 E-value=4.6e-05 Score=79.75 Aligned_cols=38 Identities=29% Similarity=0.469 Sum_probs=33.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+||+||||||++|+.+|..|++. +|++|+|||++...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~---~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED---PDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS---TTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC---CCCeEEEEcCCCCC
Confidence 369999999999999999999985 48999999998753
No 245
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.53 E-value=5.1e-05 Score=79.79 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=33.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+||||||||++|+++|..|++. |++|+|+|++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~----g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA----GKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCCC
Confidence 3569999999999999999999996 899999999874
No 246
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.53 E-value=0.0004 Score=71.03 Aligned_cols=97 Identities=20% Similarity=0.261 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhhc
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (515)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~~~------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ----GKNVTMIVRGERVLRRS------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTTTTT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCeEEEEEcCCccchhh-------------------------------------
Confidence 4899999999999999999996 89999999987541000
Q ss_pred cccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 010200 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (515)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~ 215 (515)
+ -..+...+.+.+++. ++++.+++|.+++.
T Consensus 188 --~-------------------------------~~~~~~~l~~~l~~~--v~i~~~~~v~~i~~--------------- 217 (449)
T 3kd9_A 188 --F-------------------------------DKEVTDILEEKLKKH--VNLRLQEITMKIEG--------------- 217 (449)
T ss_dssp --S-------------------------------CHHHHHHHHHHHTTT--SEEEESCCEEEEEC---------------
T ss_pred --c-------------------------------CHHHHHHHHHHHHhC--cEEEeCCeEEEEec---------------
Confidence 0 023445566666654 89999999999964
Q ss_pred ccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 216 TTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
.+ .+...+.+++++.+|.||.|.|....
T Consensus 218 -----~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 218 -----EE-RVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp -----SS-SCCEEEETTEEEECSEEEECSCEEEC
T ss_pred -----cC-cEEEEEeCCCEEECCEEEEeeCCccC
Confidence 11 23333456778999999999998643
No 247
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.51 E-value=0.00053 Score=66.44 Aligned_cols=35 Identities=31% Similarity=0.446 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+|+|||||+.|+-+|..|++. |.+|+++++.+.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~----g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY----VKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT----BSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhh----CCcEEEEEcCCcc
Confidence 5799999999999999999996 8999999987633
No 248
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.51 E-value=0.00012 Score=79.02 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=34.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
...+||+||||||||+++|..|++. |++|+|||+.+.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~----g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAAR----GHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCC
Confidence 4468999999999999999999996 9999999998865
No 249
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.50 E-value=8.1e-05 Score=80.99 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=34.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
...+||+||||||||+++|+.|++. |++|+|||+.+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~----G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES----GYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCc
Confidence 4568999999999999999999996 9999999998865
No 250
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.48 E-value=0.00024 Score=73.69 Aligned_cols=55 Identities=27% Similarity=0.249 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCc----EEEeeEEEEecCCC
Q 010200 172 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT----SLYAKLVVGADGGK 247 (515)
Q Consensus 172 ~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~----~~~ad~vV~AdG~~ 247 (515)
.+.+.+.+.+++.| |+|+.+++|++++. +........+||+ ++.+|+||.|.|..
T Consensus 273 ~~~~~~~~~L~~~G-V~v~~~~~v~~v~~--------------------~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 273 KLSSYAQSHLENTS-IKVHLRTAVAKVEE--------------------KQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHHTT-CEEETTEEEEEECS--------------------SEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhcc-eeeecCceEEEEeC--------------------CceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 45566777788888 99999999999954 2223344556664 69999999999964
No 251
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.47 E-value=9.4e-05 Score=79.56 Aligned_cols=40 Identities=25% Similarity=0.507 Sum_probs=35.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
...+||+|||||++||++|+.|++. |++|+|||+.+.++.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~----g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF----GMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT----TCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC----CCeEEEEecCCCCCC
Confidence 4568999999999999999999996 999999999987653
No 252
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.47 E-value=0.00033 Score=72.47 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=72.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+++.....
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~l~--------------------------------------- 221 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGI----GLDTTVMMRSIPLR--------------------------------------- 221 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCSST---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCceEEEEcCcccc---------------------------------------
Confidence 34799999999999999999996 89999999864220
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
.+ -.++.+.+.+.+++.| +++++++++.+++..
T Consensus 222 --~~-------------------------------d~~~~~~l~~~l~~~g-v~~~~~~~v~~i~~~------------- 254 (488)
T 3dgz_A 222 --GF-------------------------------DQQMSSLVTEHMESHG-TQFLKGCVPSHIKKL------------- 254 (488)
T ss_dssp --TS-------------------------------CHHHHHHHHHHHHHTT-CEEEETEEEEEEEEC-------------
T ss_pred --cC-------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEEc-------------
Confidence 00 0124455667777777 999999999999750
Q ss_pred cccccccCCeeEEEcCC---Cc--EEEeeEEEEecCCCch
Q 010200 215 ATTLFTKGHLAKLDLSD---GT--SLYAKLVVGADGGKSR 249 (515)
Q Consensus 215 ~~~~~~~~~~~~v~~~~---g~--~~~ad~vV~AdG~~S~ 249 (515)
.+..+.+.+.+ |+ ++.+|.||.|.|....
T Consensus 255 ------~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 255 ------PTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp ------TTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred ------CCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 12335555543 54 5799999999997544
No 253
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.46 E-value=0.00059 Score=65.71 Aligned_cols=35 Identities=34% Similarity=0.564 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
-+|+|||+|++|+-+|..|++. |.+|+++++.+.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI----VEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT----BSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh----CCEEEEEEeCccc
Confidence 5799999999999999999996 8999999987743
No 254
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.44 E-value=0.00043 Score=71.14 Aligned_cols=98 Identities=21% Similarity=0.326 Sum_probs=72.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEEeCHhHHHHHHHcCCchhhhhhh
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (515)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. .. . +
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~-----~------------~-------- 212 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLM----GVQTHIIEMLDRAL----------IT-----L------------E-------- 212 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------TT-----S------------C--------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCEEEEEEeCCcCC----------CC-----C------------C--------
Confidence 45799999999999999999996 89999999987541 00 0 0
Q ss_pred ccccceEEEEeCCCccceeeecccCCCCcceEEechHHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 010200 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (515)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~ 214 (515)
-.++.+.+.+.++ ++++.+++|++++.
T Consensus 213 -----------------------------------d~~~~~~l~~~l~----v~i~~~~~v~~i~~-------------- 239 (466)
T 3l8k_A 213 -----------------------------------DQDIVNTLLSILK----LNIKFNSPVTEVKK-------------- 239 (466)
T ss_dssp -----------------------------------CHHHHHHHHHHHC----CCEECSCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHhcCE----EEEEECCEEEEEEE--------------
Confidence 0122233444443 78999999999975
Q ss_pred cccccccC-CeeEEEcC--CCc--EEEeeEEEEecCCCchh
Q 010200 215 ATTLFTKG-HLAKLDLS--DGT--SLYAKLVVGADGGKSRV 250 (515)
Q Consensus 215 ~~~~~~~~-~~~~v~~~--~g~--~~~ad~vV~AdG~~S~v 250 (515)
.+ +.+.+.+. +|+ ++.+|.||.|.|.....
T Consensus 240 ------~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 240 ------IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp ------EETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred ------cCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 22 45677777 665 79999999999986554
No 255
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.44 E-value=0.00012 Score=80.35 Aligned_cols=40 Identities=25% Similarity=0.507 Sum_probs=35.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
....+|+|||||++||++|+.|++. |++|+|||+...++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~----g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF----GMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEEecCcCCC
Confidence 3467999999999999999999996 999999999987753
No 256
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.43 E-value=8.9e-05 Score=78.05 Aligned_cols=37 Identities=30% Similarity=0.558 Sum_probs=33.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...||+||||||.||+++|..|++. ++.+|+|||+++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~---~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN---PNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS---TTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC---CCCcEEEEecCC
Confidence 3569999999999999999999986 489999999988
No 257
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.39 E-value=0.00097 Score=64.17 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~----g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI----CSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT----SSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhh----CCEEEEEEeCCCC
Confidence 35799999999999999999996 8999999987743
No 258
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.36 E-value=0.00014 Score=76.63 Aligned_cols=37 Identities=30% Similarity=0.579 Sum_probs=33.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..||+||||||.||+++|..|++. .+.+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~---~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN---PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS---TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC---CCCcEEEEecCCC
Confidence 469999999999999999999997 2489999999886
No 259
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.35 E-value=0.00089 Score=65.17 Aligned_cols=36 Identities=33% Similarity=0.360 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.-+|+|||||..|+-+|..|++. |.+|+++++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~----g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY----GSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhc----CCeEEEEecCCcC
Confidence 45799999999999999999996 8999999988743
No 260
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.30 E-value=0.00097 Score=64.37 Aligned_cols=36 Identities=31% Similarity=0.341 Sum_probs=32.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~----g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY----STKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHh----CCeEEEEEeCCCC
Confidence 35799999999999999999996 8999999988754
No 261
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.28 E-value=0.00015 Score=74.35 Aligned_cols=39 Identities=23% Similarity=0.259 Sum_probs=33.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.++||+||||||+|+.+|..|++.+ ++++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH--SRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC--SSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC--CCCCEEEEeCCCcC
Confidence 3579999999999999999999961 12999999998865
No 262
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.27 E-value=0.00099 Score=69.77 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=32.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|+|||+|.+|+-+|..|++. +.+|+|++|.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~----~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET----AKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT----BSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh----CCEEEEEEcCCC
Confidence 45899999999999999999996 899999999985
No 263
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.26 E-value=0.00069 Score=64.59 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=29.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|+|||+|+.|+-+|..|++. | +|+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~----g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW----G-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT----S-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhc----C-cEEEEECCC
Confidence 45899999999999999999996 8 999998665
No 264
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.24 E-value=0.00012 Score=75.14 Aligned_cols=39 Identities=26% Similarity=0.419 Sum_probs=33.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhc-CCCCC----CcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLAS-MPLTK----HLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~-~~~~~----G~~V~v~E~~~~~ 94 (515)
.++||+||||||+|+++|..|++ .. + |++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~--~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAAD--TTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHH--HSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCc--cccCCCCeEEEEecCCCC
Confidence 35899999999999999999988 41 2 7999999998755
No 265
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.24 E-value=0.00013 Score=76.50 Aligned_cols=37 Identities=30% Similarity=0.609 Sum_probs=33.3
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
...||+||||||.||+.+|..|++ |.+|+|+|+++..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-----g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-----KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-----TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-----CCcEEEEecCCCc
Confidence 356999999999999999999999 6899999999754
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.23 E-value=0.0011 Score=64.29 Aligned_cols=36 Identities=28% Similarity=0.391 Sum_probs=31.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~----~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPI----AKEVSIIHRRDKF 189 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT----BSEEEEECSSSSC
T ss_pred CCEEEEECCCHhHHHHHHHHHhh----CCeEEEEEecCcC
Confidence 35799999999999999999996 8999999987643
No 267
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.22 E-value=0.0017 Score=67.92 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|+|||+|.+|+-+|..|++. |.+|+|++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~----~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE----VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT----CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh----CCEEEEEECCCC
Confidence 45899999999999999999996 899999999986
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.21 E-value=0.0013 Score=64.27 Aligned_cols=36 Identities=31% Similarity=0.461 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~----g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF----ARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT----CSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHh----CCeEEEEEcCCcC
Confidence 45799999999999999999996 8999999987643
No 269
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.19 E-value=0.0011 Score=69.11 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
-+|+|||||..|+-+|..|++. |.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~----G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI----GLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHc----CCeEEEEecc
Confidence 4699999999999999999996 8999999985
No 270
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.18 E-value=0.00017 Score=75.80 Aligned_cols=37 Identities=27% Similarity=0.454 Sum_probs=33.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.||+||||||.||+.+|..|++. +|.+|+|+|+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~---~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED---PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS---TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC---cCCcEEEEecCCcc
Confidence 58999999999999999999985 48999999998754
No 271
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.17 E-value=0.0013 Score=69.76 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
-+|+|||||..|+-+|..|++. |.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL----GGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHc----CCEEEEEECC
Confidence 4799999999999999999996 8999999987
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.17 E-value=0.00022 Score=80.42 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=33.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~~ 94 (515)
..+||+||||||||+++|+.|++. |+ +|+|||+.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~----G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL----GYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT----TCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc----CCCcEEEEeCCCCC
Confidence 357999999999999999999996 88 79999998755
No 273
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.11 E-value=0.00021 Score=76.51 Aligned_cols=36 Identities=33% Similarity=0.719 Sum_probs=33.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCC--------cEEEEEcCCC-CC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKH--------LSVAIIDSNP-AL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G--------~~V~v~E~~~-~~ 94 (515)
..+|+|||||++||++|+.|++. | ++|+|||+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~----g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL----AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CcccccCCCceEEEEeccCccc
Confidence 47899999999999999999986 6 9999999998 66
No 274
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.07 E-value=0.00052 Score=72.58 Aligned_cols=39 Identities=26% Similarity=0.522 Sum_probs=34.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+..+|+||||||++|+++|..|++. .|.+|+|+|++...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~---~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTEN---PKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTS---TTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhC---CCCcEEEEecCCcc
Confidence 3569999999999999999999994 38999999998754
No 275
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.01 E-value=0.00052 Score=71.99 Aligned_cols=38 Identities=37% Similarity=0.628 Sum_probs=34.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|++|||||++|+++|..|++. +|.+|+|+|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~---~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED---PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS---TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC---CCCCEEEEecCCcC
Confidence 469999999999999999999996 38999999998654
No 276
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.00 E-value=0.00037 Score=72.40 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+||+|||+|++|+++|..|++. |++|+|+|++..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~----~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA----GVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCCC
Confidence 468999999999999999999995 899999999874
No 277
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.99 E-value=0.00044 Score=71.82 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|++|||+|++|+++|..|++. |.+|+|+|++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~----~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA----GIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEECCCC
Confidence 3569999999999999999999995 999999999864
No 278
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.92 E-value=0.0032 Score=65.50 Aligned_cols=36 Identities=33% Similarity=0.540 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.-+|+|||||.+|+-+|..|++. |.+|+++++.+.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~----g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGI----VEHVTLLEFAPEM 390 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH----BSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhh----CCEEEEEEeCccc
Confidence 35799999999999999999996 8999999987643
No 279
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.87 E-value=0.00074 Score=67.50 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~----g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS----GTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCeEEEEEcCCcc
Confidence 4799999999999999999996 8999999998865
No 280
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.80 E-value=0.0045 Score=63.29 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHh--------------------cCCCCCCc-EEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLA--------------------SMPLTKHL-SVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~--------------------~~~~~~G~-~V~v~E~~~~~ 94 (515)
.-+|+|||||..|+-+|..|+ +. |. +|+|++++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~----g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQS----RVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTC----CCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhC----CCcEEEEEEcCChH
Confidence 458999999999999999999 43 66 79999998754
No 281
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.63 E-value=0.0026 Score=64.80 Aligned_cols=34 Identities=21% Similarity=0.102 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcE-EEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLS-VAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~-V~v~E~~~ 92 (515)
.-+|+|||||.+|+=+|..|++. |.+ |+|+++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~----~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV----AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT----SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH----hCCcEEEEeCCC
Confidence 35799999999999999999997 788 99999875
No 282
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.62 E-value=0.0063 Score=65.47 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCC--cEEEeeEEEEecCCCc
Q 010200 175 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKS 248 (515)
Q Consensus 175 ~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~ad~vV~AdG~~S 248 (515)
..+.+.+++.| ++++.+++|++++. +.+++. .+| +++.+|.||.|.|...
T Consensus 577 ~~~~~~l~~~G-V~v~~~~~v~~i~~----------------------~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRG-VKMIPGVSYQKIDD----------------------DGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEEET----------------------TEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcC-CEEEeCcEEEEEeC----------------------CeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 34556666777 99999999999853 345554 566 5799999999999653
No 283
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.61 E-value=0.0038 Score=65.33 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|+|||+|.+|+-+|..|++. |.+|+|++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~----~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ----AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH----BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh----CCEEEEEECCCC
Confidence 45899999999999999999996 899999999985
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.56 E-value=0.005 Score=63.06 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.-+|+|||||.+|+=+|..|++. |.+|+|+++.+.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~----g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY----GAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT----TCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh----CCeEEEEEECCCC
Confidence 35799999999999999999996 8999999987643
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.55 E-value=0.0048 Score=67.00 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=31.7
Q ss_pred CccEEEEC--CCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVG--GGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVG--gG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+||| ||..|+-+|..|++. |.+|+|+++.+ +
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~----G~~Vtlv~~~~-l 564 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATA----GHEVTIVSGVH-L 564 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHT----TCEEEEEESSC-T
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc----CCEEEEEeccc-c
Confidence 35799998 999999999999996 89999999987 5
No 286
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.55 E-value=0.005 Score=62.87 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCC----------------CCC-cEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPL----------------TKH-LSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~----------------~~G-~~V~v~E~~~~~ 94 (515)
.-+|+|||+|.+|+-+|..|++.+. ..| .+|+|++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4579999999999999999987200 014 489999998754
No 287
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.53 E-value=0.0021 Score=67.89 Aligned_cols=41 Identities=24% Similarity=0.345 Sum_probs=37.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~~~ 96 (515)
++.+|||+|||+|+.|..+|..|++. |.+|+++||++..+.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~----g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS----GQRVLHVDSRSYYGG 45 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC----CCEEEEEcCCCcccC
Confidence 44579999999999999999999996 999999999998863
No 288
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.26 E-value=0.0057 Score=68.47 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~----G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT----GGVVAVIDARSSI 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG----TCCSEEEESCSSC
T ss_pred CeEEEEcCCHHHHHHHHHHHHc----CCcEEEEECCCcc
Confidence 4799999999999999999996 8889999998744
No 289
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.90 E-value=0.013 Score=59.85 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~~ 94 (515)
.-+|+|||||.+|+-+|..+.+. |. +|+++++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~----Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ----GATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT----TCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHc----CCCEEEEEEeCCcc
Confidence 45899999999999999999986 66 69999988743
No 290
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.81 E-value=0.0084 Score=50.30 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=32.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+-.|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~----g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS----DIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 345799999999999999999996 999999999874
No 291
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.74 E-value=0.016 Score=56.44 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=29.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|+|||||.+|+-+|..|++. | +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~----~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV----A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT----S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh----C-CEEEEECCC
Confidence 35899999999999999999996 6 699999874
No 292
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.74 E-value=0.029 Score=56.16 Aligned_cols=51 Identities=10% Similarity=0.055 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCc
Q 010200 173 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 173 l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S 248 (515)
+...+.+.+++.| ++++++++|++++. .. +.+++|+++.+|+||.|.|...
T Consensus 220 ~~~~~~~~l~~~g-V~~~~~~~v~~i~~----------------------~~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYNQLG-IKLVHNFKIKEIRE----------------------HE--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHT-CEEECSCCEEEECS----------------------SE--EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHCC-CEEEcCCceEEECC----------------------Ce--EEECCCCEEeeeEEEECCCCCc
Confidence 3345556666667 99999999999954 22 6678899999999999999643
No 293
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.66 E-value=0.011 Score=50.56 Aligned_cols=36 Identities=25% Similarity=0.316 Sum_probs=32.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
....|+|||+|..|..+|..|++. |++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~----g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS----GHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 346899999999999999999996 899999999764
No 294
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.46 E-value=0.056 Score=60.89 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
-+|+|||||..|+-+|..|++. |. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~----G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRC----GARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT----TCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHc----CCCEEEEEEecC
Confidence 3899999999999999999996 75 899999886
No 295
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.19 E-value=0.019 Score=55.12 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF----ADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCEEEEEeccccc
Confidence 4799999999999999999996 8999999998755
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.18 E-value=0.018 Score=47.71 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~----g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK----GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 5799999999999999999996 89999999865
No 297
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.87 E-value=0.041 Score=55.65 Aligned_cols=50 Identities=10% Similarity=-0.013 Sum_probs=35.6
Q ss_pred HHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEc--CC-----CcEEEeeEEEEecCCC
Q 010200 175 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SD-----GTSLYAKLVVGADGGK 247 (515)
Q Consensus 175 ~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~-----g~~~~ad~vV~AdG~~ 247 (515)
..+.+.+++.| ++++++++|++++. +.+.+.. .+ +.++.+|+||.|.|..
T Consensus 212 ~~~~~~l~~~g-I~~~~~~~v~~v~~----------------------~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 212 GILTKGLKEEG-IEAYTNCKVTKVED----------------------NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHHTT-CEEECSEEEEEEET----------------------TEEEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHHCC-CEEEcCCEEEEEEC----------------------CeEEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 44556666777 99999999999964 2344332 33 4578999999998843
No 298
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.87 E-value=0.027 Score=47.87 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+..|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~----g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR----GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT----TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC----CCCEEEEECCC
Confidence 45799999999999999999996 89999999974
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.87 E-value=0.03 Score=44.81 Aligned_cols=33 Identities=30% Similarity=0.576 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCC-cEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G-~~V~v~E~~~ 92 (515)
.+|+|+|+|..|..++..|.+. | ++|.++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~----g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS----SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCH
Confidence 5799999999999999999996 7 9999999875
No 300
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.83 E-value=0.048 Score=55.05 Aligned_cols=51 Identities=6% Similarity=-0.072 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcC--CCcEEEeeEEEEecCCCc
Q 010200 175 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DGTSLYAKLVVGADGGKS 248 (515)
Q Consensus 175 ~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~g~~~~ad~vV~AdG~~S 248 (515)
..+.+.+++.| ++++++++|++++. +.+++... +++++.+|+||.|.|...
T Consensus 204 ~~l~~~l~~~G-V~i~~~~~v~~v~~----------------------~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 204 RLVEDLFAERN-IDWIANVAVKAIEP----------------------DKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEECS----------------------SEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHCC-CEEEeCCEEEEEeC----------------------CeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 45666777777 99999999999953 33444431 256899999999998643
No 301
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.62 E-value=0.015 Score=60.75 Aligned_cols=36 Identities=19% Similarity=0.391 Sum_probs=31.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||+|.+|+-+|..|++. |.+|++++|.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~----~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQ----AAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH----BSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhc----CceEEEEEcCCcc
Confidence 45899999999999999999996 8899999987643
No 302
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.52 E-value=0.024 Score=47.32 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~----g~~V~~id~~~~ 40 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA----GKKVLAVDKSKE 40 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCeEEEEECCHH
Confidence 4699999999999999999996 999999998763
No 303
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.38 E-value=0.044 Score=52.38 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||||..|+-+|..|++. |.+|+|+|+....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~----G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKY----GSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHh----CCeeeeecccccc
Confidence 35799999999999999999997 9999999987644
No 304
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.24 E-value=0.11 Score=53.57 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|+|||+|-+|.-.+..|++.. .+.+|+++=|.+.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~--~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRY--PNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHS--TTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcC--CCceEEEEeCCCc
Confidence 357999999999999999998632 3689999988764
No 305
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.22 E-value=0.042 Score=53.90 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=32.4
Q ss_pred CCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+.+..++|.|||+|--|.++|..|++. |++|+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~----G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARK----GQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTT----TCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHC----CCeEEEEeCCH
Confidence 334457899999999999999999996 89999999875
No 306
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.00 E-value=0.052 Score=51.90 Aligned_cols=34 Identities=29% Similarity=0.541 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~----G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT----GHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 3699999999999999999996 999999998763
No 307
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.79 E-value=0.057 Score=52.41 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
+..+|+|||+|-.|.++|..|++. |+ +|+++|++..
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~----g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALR----ELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECChh
Confidence 346899999999999999999985 77 9999999864
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.57 E-value=0.047 Score=55.59 Aligned_cols=36 Identities=25% Similarity=0.470 Sum_probs=32.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..++|+|+|+|-.|..+|..|... |++|+|+|+++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~----~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE----NNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST----TEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 357899999999999999999985 999999999864
No 309
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.41 E-value=0.042 Score=49.74 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~----g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR----KYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 3699999999999999999996 999999998764
No 310
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.34 E-value=0.25 Score=46.91 Aligned_cols=33 Identities=3% Similarity=0.045 Sum_probs=25.2
Q ss_pred ccEEEECCCH-HHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGM-VGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~-aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+++|||||. +++.+|..+++. |.+|+|+++..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~----~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW----STDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT----CSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhC----CceEEEEeccc
Confidence 4678888775 567888888885 88999987765
No 311
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.34 E-value=0.077 Score=52.56 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|+|||+|++|+.+|..|... |.+|+++|+.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l----Ga~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL----GAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 346899999999999999999997 899999999874
No 312
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.26 E-value=0.058 Score=44.80 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~----g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM----GHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 3599999999999999999996 89999999865
No 313
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.23 E-value=0.07 Score=46.71 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCC-CcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTK-HLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~-G~~V~v~E~~~~ 93 (515)
...|+|||+|..|..+|..|.+ . |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~----~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA----RYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH----HHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHh----ccCCeEEEEECCHH
Confidence 4579999999999999999998 5 789999998763
No 314
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.93 E-value=0.083 Score=50.95 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|+|||+|-.|.+.|..|++. |++|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~----g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT----GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT----TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCh
Confidence 5799999999999999999996 89999999864
No 315
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.85 E-value=0.1 Score=49.31 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~----G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH----GFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCHH
Confidence 4799999999999999999996 999999998763
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.60 E-value=0.11 Score=47.07 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=30.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|+|||||..|...|..|.+. |.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~----GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE----GAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG----CCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEECCCC
Confidence 346899999999999999999996 89999998653
No 317
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.36 E-value=0.11 Score=49.98 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
..+|+|||+|-.|.++|..|++. |+ +|+++|+++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~----g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD----NLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCch
Confidence 46899999999999999999996 77 9999998763
No 318
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.29 E-value=0.79 Score=46.88 Aligned_cols=34 Identities=9% Similarity=0.206 Sum_probs=29.3
Q ss_pred CcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHh
Q 010200 394 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 433 (515)
Q Consensus 394 ~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~ 433 (515)
+++.++||+.+ |.|++-|+.++...|+.|.+.+.
T Consensus 461 ~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 461 PGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp TTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 78999999865 56899999999999999987664
No 319
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.29 E-value=0.084 Score=50.69 Aligned_cols=34 Identities=38% Similarity=0.523 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
-+|.|||+|.-|...|..++++ |++|+++|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~----G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG----GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 4799999999999999999996 999999998763
No 320
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.20 E-value=0.094 Score=51.48 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=32.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|+|||+|.+|+.+|..|... |.+|+++|+.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l----Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL----GAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH----TCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 346899999999999999999997 899999998874
No 321
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.13 E-value=0.12 Score=52.86 Aligned_cols=35 Identities=23% Similarity=0.486 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+++|.|||+|-.|+.+|..|++. |++|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~----G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI----GHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 357899999999999999999996 99999999875
No 322
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.06 E-value=0.13 Score=50.38 Aligned_cols=34 Identities=35% Similarity=0.254 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.++|.|||+|-.|...|..|++. |++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~----g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK----GQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 46899999999999999999996 89999999865
No 323
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.05 E-value=0.27 Score=49.65 Aligned_cols=34 Identities=26% Similarity=0.477 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a----G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA----GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCeEEEEECcHH
Confidence 5799999999999999999996 999999998873
No 324
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.02 E-value=0.14 Score=48.34 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+|.|||+|..|.+.|..|++. |++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ----GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC----CCCEEEEEcCcc
Confidence 699999999999999999996 899999998764
No 325
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.01 E-value=0.093 Score=49.14 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|||||-+|+..|..|.+. |.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~----Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT----GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG----TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC----CCEEEEEcCCC
Confidence 46799999999999999999996 99999998654
No 326
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.97 E-value=0.13 Score=49.08 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=32.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|.|||.|-.|...|..|++. |++|+++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~----G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW----PGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS----TTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCHHH
Confidence 46899999999999999999996 9999999998753
No 327
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.94 E-value=0.11 Score=52.69 Aligned_cols=35 Identities=14% Similarity=0.308 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+|+|||.|++|+++|..|++. |++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~----G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR----GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT----TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC----CCEEEEEECCCCc
Confidence 4699999999999999999985 9999999997754
No 328
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.86 E-value=0.16 Score=45.54 Aligned_cols=36 Identities=17% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|.|||+|-.|.++|..|++. |++|+++++.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~----g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA----GHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT----TCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 346799999999999999999996 899999998764
No 329
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.85 E-value=0.1 Score=50.07 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|+|||+|-.|.+.|..|++. |++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~----g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS----GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT----SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCeEEEEEcCc
Confidence 5799999999999999999996 89999999864
No 330
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.84 E-value=0.16 Score=48.78 Aligned_cols=36 Identities=31% Similarity=0.454 Sum_probs=31.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
+...+|.|||+|..|.++|+.|++. |+ +|+++|..+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~----g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK----ELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeccc
Confidence 3456899999999999999999996 78 999999873
No 331
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.84 E-value=0.14 Score=49.25 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
.++|+|||+|-.|.++|..|++. |+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~----g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR----GIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 36899999999999999999996 78 999999875
No 332
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.76 E-value=0.14 Score=52.01 Aligned_cols=34 Identities=32% Similarity=0.326 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|.|||.|.+|+++|..|++. |++|+++|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~----G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL----GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT----TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC----CCEEEEEeCCc
Confidence 35799999999999999999996 99999999876
No 333
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.72 E-value=0.17 Score=48.96 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
.+|+|||+|-.|.++|..|++. |+ +|.++|.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~----g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK----DLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCHH
Confidence 5899999999999999999996 77 9999999864
No 334
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.64 E-value=0.18 Score=48.56 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
..+|+|||+|-.|..+|..|+.. |+ +|.++|.+..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~----g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK----NLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeCCHH
Confidence 35899999999999999999996 77 8999998763
No 335
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.49 E-value=0.16 Score=51.54 Aligned_cols=34 Identities=38% Similarity=0.558 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++|.|||+|-.|+.+|..|++. |++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~----G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL----GANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc----CCEEEEEECCHH
Confidence 5799999999999999999996 999999998763
No 336
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.49 E-value=0.14 Score=49.65 Aligned_cols=32 Identities=25% Similarity=0.408 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
++|+|||+|-.|.++|..|++. |++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~----g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA----GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT----TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCEEEEEECh
Confidence 5799999999999999999996 8999999874
No 337
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.42 E-value=0.12 Score=43.31 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|||+|..|..+|..|++. |++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~----g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP----QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT----TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCEEEEEcCCH
Confidence 45799999999999999999985 88899999875
No 338
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.29 E-value=0.13 Score=49.57 Aligned_cols=34 Identities=38% Similarity=0.523 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~----G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG----GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 5799999999999999999996 999999998864
No 339
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.27 E-value=0.19 Score=50.50 Aligned_cols=36 Identities=31% Similarity=0.400 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+..+|.|||.|-.||.+|..|++. |++|+.+|-++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~----G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL----GHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC----CCcEEEEECCHH
Confidence 346899999999999999999985 999999998763
No 340
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.26 E-value=0.17 Score=48.31 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|.|||+|..|.++|..|++. |++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG----GNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhC----CCcEEEEECCH
Confidence 4799999999999999999996 89999999865
No 341
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.23 E-value=0.29 Score=47.25 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHH-HHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMA-LACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~-~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||.|.+|++ +|..|++. |++|.++|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~----G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA----GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT----TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC----CCEEEEEcCCCC
Confidence 46999999999996 88888885 999999998764
No 342
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.23 E-value=0.19 Score=48.11 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|.|||.|..|..+|..|++. |++|+++++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~----G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN----GFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHC----CCeEEEEeCCHH
Confidence 36899999999999999999996 999999998864
No 343
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.14 E-value=0.19 Score=50.71 Aligned_cols=37 Identities=19% Similarity=0.407 Sum_probs=33.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+.+|.|||.|-.|+.+|..|++. |++|+++++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~----G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF----GHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC----CCEEEEEeCCHHH
Confidence 357899999999999999999996 9999999998753
No 344
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.13 E-value=0.21 Score=50.10 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..++|.|||.|-.|+.+|..|++ |++|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-----G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-----NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-----TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-----CCeEEEEecCHH
Confidence 34689999999999999999998 799999998764
No 345
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.02 E-value=0.19 Score=50.12 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...|+|||+|.+|+.+|..|+.. |.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~----Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL----GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 46799999999999999999987 899999998764
No 346
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.80 E-value=0.23 Score=49.21 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
....|+|+|+|.+|+.+|..|+.. |.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~----Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL----GAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 346899999999999999999987 889999998764
No 347
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.79 E-value=0.21 Score=47.61 Aligned_cols=34 Identities=38% Similarity=0.439 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|.|||.|-.|..+|..|++. |++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~----G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA----GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC----CCeEEEEECCH
Confidence 46899999999999999999996 99999999876
No 348
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.71 E-value=0.25 Score=47.61 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
+..+|+|||+|-.|.++|..|+.. |+ +|.++|....
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~----~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLK----ELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeCCch
Confidence 346899999999999999999996 66 9999998764
No 349
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.70 E-value=0.21 Score=47.74 Aligned_cols=32 Identities=31% Similarity=0.486 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
+|+|||+|-.|.++|..|+.. |+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR----GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCH
Confidence 699999999999999999996 77 999999875
No 350
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.67 E-value=0.22 Score=48.79 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=32.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++..++|.|||.|.-|..+|..|++. |++|+++++.+.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~----G~~V~v~dr~~~ 56 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKG----GHECVVYDLNVN 56 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhC----CCEEEEEeCCHH
Confidence 44567899999999999999999996 999999998763
No 351
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.52 E-value=0.17 Score=48.51 Aligned_cols=32 Identities=34% Similarity=0.353 Sum_probs=29.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCC-----C-cEEEEEcC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTK-----H-LSVAIIDS 90 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~-----G-~~V~v~E~ 90 (515)
+++|.|||+|..|.++|..|++ . | ++|++++|
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~----~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLAL----RAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH----HHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHh----CccccCCCCCEEEEEc
Confidence 3689999999999999999998 4 7 89999987
No 352
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.49 E-value=0.24 Score=47.40 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+|+|||+|-.|.++|..|++.+ .|.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~--~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQ--LARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCChh
Confidence 6999999999999999999842 2789999999763
No 353
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.49 E-value=0.26 Score=47.16 Aligned_cols=32 Identities=25% Similarity=0.555 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|+|||+|-.|.+.|..|+ . |.+|+++.|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~----g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L----YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T----TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c----CCceEEEECCH
Confidence 68999999999999999999 6 89999999875
No 354
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=90.35 E-value=0.2 Score=52.05 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
+-+++|||||+.|+=+|..+++. |.+|+|+++...+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~l----G~~VTii~~~~~L 258 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSL----GYDVTVAVRSIVL 258 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH----TCCEEEEESSCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhc----CCeEEEecccccc
Confidence 45799999999999999999997 9999999986544
No 355
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.24 E-value=0.24 Score=46.98 Aligned_cols=35 Identities=26% Similarity=0.468 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+..|.|||+|.-|...|..|+ + |++|+++|+.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a----G~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S----KHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T----TSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c----CCEEEEEECCHH
Confidence 4578999999999999999999 8 999999998763
No 356
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.17 E-value=0.28 Score=48.10 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|.|||+|-.|.+.|..|++. |++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~----G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK----CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT----EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 799999999999999999996 89999999875
No 357
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.15 E-value=0.23 Score=48.68 Aligned_cols=33 Identities=33% Similarity=0.461 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..|+|+|+|.+|++++..|+.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~----Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL----GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 6799999999999999999996 88999999875
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.15 E-value=0.18 Score=50.38 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+..|+|||.|..|..+|..|.+. |++|+|+|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~----g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS----GVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT----TCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 35799999999999999999996 999999999865
No 359
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.14 E-value=0.27 Score=47.14 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|.|||+|..|...|..|++. |++|.++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~----g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM----GHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhC----CCEEEEEeCCHH
Confidence 46899999999999999999986 899999998764
No 360
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.14 E-value=0.14 Score=48.67 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|+|||+|--|.+.|..|++. |++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~----g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS----LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH----CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC----CCeEEEEEecc
Confidence 5799999999999999999996 89999999875
No 361
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.11 E-value=0.24 Score=46.76 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++|.|||.|-.|..+|..|++. |++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~----G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA----GCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHC----CCeEEEEcCCHH
Confidence 4799999999999999999996 999999998864
No 362
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=90.06 E-value=0.32 Score=49.31 Aligned_cols=57 Identities=9% Similarity=-0.029 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccc--CCe-eEEEcCCCcEEEeeEEEEecCCC
Q 010200 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GHL-AKLDLSDGTSLYAKLVVGADGGK 247 (515)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~v~~~~g~~~~ad~vV~AdG~~ 247 (515)
..+.+.|.+.+++.| ++|+++++|++|.. . ++. +.|.. +|+++.||.||.|.|.+
T Consensus 242 ~~l~~al~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 242 GELPQGFARLSAIYG-GTYMLDTPIDEVLY--------------------KKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp THHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 478899999999888 89999999999976 2 233 34554 57789999999999998
Q ss_pred ch
Q 010200 248 SR 249 (515)
Q Consensus 248 S~ 249 (515)
+.
T Consensus 300 ~~ 301 (453)
T 2bcg_G 300 PE 301 (453)
T ss_dssp GG
T ss_pred ch
Confidence 64
No 363
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.01 E-value=0.27 Score=47.24 Aligned_cols=36 Identities=28% Similarity=0.468 Sum_probs=30.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~ 93 (515)
++.+|+|||+|-.|.++|+.|+.. |+ ++.++|.+..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~----~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALR----QTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT----TCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChH
Confidence 347899999999999999999996 66 8999998753
No 364
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.98 E-value=0.21 Score=46.15 Aligned_cols=33 Identities=30% Similarity=0.392 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
.+|+|||+|-.|..+|..|++. |. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~----Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA----GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc----CCCeEEEEcCCC
Confidence 5799999999999999999997 76 899999886
No 365
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.88 E-value=0.26 Score=50.12 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
.++|.|||+|-.|+.+|..|++. +|+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~---~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA---PCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS---TTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHh---CCCCeEEEEECChh
Confidence 35799999999999999999994 289 9999999876
No 366
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.74 E-value=0.38 Score=48.92 Aligned_cols=33 Identities=36% Similarity=0.597 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~----G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV----GISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT----TCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 4799999999999999999996 99999999876
No 367
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.70 E-value=0.35 Score=46.47 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
..+|.|||+|..|.++|..|+.. |+ ++.++|..+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~----~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK----QLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCceEEEEeCChH
Confidence 46899999999999999999986 55 9999998763
No 368
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.65 E-value=0.36 Score=46.05 Aligned_cols=35 Identities=34% Similarity=0.490 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...+|.|||.|.-|...|..|++. |++|+++++++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~----G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ----GKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 346899999999999999999996 89999999876
No 369
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.61 E-value=0.25 Score=48.41 Aligned_cols=37 Identities=24% Similarity=0.422 Sum_probs=32.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
..+.+|+|+|||-||..+|..|... |. +|+++|+...
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~----Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAA----GATKVTVVDKFGI 223 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHH----TCCEEEEEETTEE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHc----CCCeEEEEECCCc
Confidence 3467899999999999999999997 77 9999999853
No 370
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.55 E-value=0.3 Score=47.29 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+++|.|||+|--|.+.|..|++. |++|++++|.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~----G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN----GEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCH
Confidence 457899999999999999999996 89999999865
No 371
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.53 E-value=0.28 Score=47.16 Aligned_cols=36 Identities=19% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|.|||.|..|..+|..|++. |++|+++++.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~----G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA----GYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhC----CCeEEEEcCCHH
Confidence 346899999999999999999996 999999998763
No 372
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.47 E-value=0.29 Score=47.15 Aligned_cols=35 Identities=31% Similarity=0.544 Sum_probs=30.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
...+|+|||+|..|.++|..|+.. |+ ++.++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~----~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ----GITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCceEEEEecch
Confidence 346899999999999999999985 65 899999864
No 373
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.46 E-value=0.24 Score=49.94 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|.|||+|-.|+.+|..|++. |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~----G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR----GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT----TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 699999999999999999996 89999999875
No 374
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.42 E-value=0.33 Score=44.64 Aligned_cols=36 Identities=33% Similarity=0.509 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|.|||+|--|.++|..|++. |++|++++|++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~----G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL----GHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCEEEEEeCChh
Confidence 457899999999999999999996 899999998763
No 375
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.14 E-value=0.32 Score=46.76 Aligned_cols=33 Identities=33% Similarity=0.482 Sum_probs=29.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|+|||+|--|.++|..|++. |++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~----G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA----GHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT----TCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHC----CCeEEEE-EcH
Confidence 46899999999999999999996 8999999 654
No 376
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.13 E-value=0.37 Score=46.08 Aligned_cols=33 Identities=27% Similarity=0.504 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
.+|+|||+|-.|..+|..|+.. |+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~----g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK----ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCCeEEEEeCCc
Confidence 5799999999999999999986 65 899999875
No 377
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.95 E-value=0.32 Score=46.88 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=31.2
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCC----cEEEEEcCCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKH----LSVAIIDSNPA 93 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G----~~V~v~E~~~~ 93 (515)
+..++|.|||+|--|.++|..|++. | ++|++++|.+.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~----G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAA----GVLAAHKIMASSPDMD 60 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHT----TSSCGGGEEEECSCTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC----CCCCcceEEEECCCcc
Confidence 3446899999999999999999996 7 89999998763
No 378
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.83 E-value=0.24 Score=45.18 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=30.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...|+|+|+|..|..+|..|.+. |+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~----g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS----EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS----EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC----Ce-EEEEECCHH
Confidence 45799999999999999999986 89 999998864
No 379
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.82 E-value=0.34 Score=43.58 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|.|||+|-.|...|..|++. |++|.+++|+.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~----g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS----GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 5799999999999999999986 89999999875
No 380
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.78 E-value=0.38 Score=47.31 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|+|+|..|+.+|..|+.. |.+|+++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~----Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM----GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 46799999999999999999986 89999999875
No 381
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.74 E-value=0.37 Score=46.30 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCC-cEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G-~~V~v~E~~~~ 93 (515)
.+|.|||.|-.|..+|..|++. | ++|+++++.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~----G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR----NAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT----TCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc----CCCeEEEEeCCCc
Confidence 5799999999999999999996 9 99999999863
No 382
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.61 E-value=0.13 Score=46.77 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=29.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~ 90 (515)
.++|.|||.|..|.++|..|++. |++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~----G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV----GHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT----TCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC----CCEEEEecC
Confidence 46899999999999999999996 899999876
No 383
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.25 E-value=0.41 Score=48.94 Aligned_cols=36 Identities=17% Similarity=0.484 Sum_probs=32.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL----GVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHc----CCeEEEEECCCcc
Confidence 45899999999999999999996 8999999998765
No 384
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.19 E-value=0.52 Score=45.19 Aligned_cols=34 Identities=32% Similarity=0.411 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
..+|.|||.|..|.++|..|++. |+ +|.++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~----G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS----GFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT----TCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC----CCCCEEEEEECCH
Confidence 36899999999999999999996 88 999999876
No 385
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.14 E-value=0.44 Score=46.97 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|||+|..|+.+|..|+.. |.+|+++++.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~----Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM----GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 46799999999999999999986 89999999875
No 386
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.03 E-value=0.37 Score=45.68 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|.|||+|..|...|..|++. |++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA----GYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 5799999999999999999996 89999999875
No 387
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=87.97 E-value=0.44 Score=48.37 Aligned_cols=36 Identities=14% Similarity=0.373 Sum_probs=32.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL----GVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEcCCcc
Confidence 45899999999999999999996 8999999998865
No 388
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.97 E-value=0.35 Score=45.82 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
++|+|||+|..|.++|+.|++. |+ +|.++|+.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~----~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN----LDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCeEEEEECCh
Confidence 3699999999999999999986 66 899999876
No 389
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.97 E-value=0.38 Score=45.65 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|.|||+|-.|...|..|++. |++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE----GVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT----TCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHC----CCeEEEEeCCH
Confidence 46899999999999999999986 89999999875
No 390
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.96 E-value=0.52 Score=42.00 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=29.3
Q ss_pred cEEEEC-CCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVG-GGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVG-gG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|+||| +|-.|..+|..|++. |++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~----g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL----GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT----TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 699999 999999999999996 89999999865
No 391
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.85 E-value=0.33 Score=46.81 Aligned_cols=30 Identities=30% Similarity=0.425 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~ 90 (515)
+|.|||+|-.|.++|..|++. |++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~----g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN----GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH----CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC----CCeEEEEEc
Confidence 699999999999999999996 899999998
No 392
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.65 E-value=0.4 Score=46.88 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=31.9
Q ss_pred CCCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
..+.+|+|+|||-+|..+|..|... |. +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~----G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL----GVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH----TCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCC
Confidence 3567899999999999999999987 77 899999984
No 393
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.57 E-value=0.46 Score=47.29 Aligned_cols=32 Identities=28% Similarity=0.326 Sum_probs=28.3
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~ 90 (515)
++|.|||+|-.|.++|..|++. .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~---~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR---DGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS---TTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhC---CCCEEEEEeC
Confidence 5799999999999999999873 2899999983
No 394
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.50 E-value=0.55 Score=43.79 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...|+|+|+|-+|-++|..|++. |.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~----G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ----GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 46899999999999999999997 889999998864
No 395
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.39 E-value=0.43 Score=44.22 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCC----cEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKH----LSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G----~~V~v~E~~~~ 93 (515)
.++|.|||+|--|.+.|..|++. | ++|.++++.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~----g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA----NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH----TSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC----CCCCCCeEEEEeCCcc
Confidence 35799999999999999999986 7 79999998763
No 396
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.38 E-value=0.39 Score=46.13 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
+|+|||+|-.|.++|..|++. |+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~----g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK----GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCeEEEEeCCh
Confidence 699999999999999999986 78 999999875
No 397
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.36 E-value=0.47 Score=45.55 Aligned_cols=35 Identities=31% Similarity=0.460 Sum_probs=29.9
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCC--cEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G--~~V~v~E~~~ 92 (515)
.+.+|+|||+|-.|.++|+.|+.. | ..+.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~----~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ----SIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----CSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 457899999999999999999985 5 4899998764
No 398
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.35 E-value=0.26 Score=44.58 Aligned_cols=34 Identities=29% Similarity=0.502 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEE-EcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAI-IDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v-~E~~~~ 93 (515)
++|.|||+|-.|.++|..|++. |++|++ ++|++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~----g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA----QIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT----TCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCEEEEEECCCHH
Confidence 5799999999999999999996 899998 888763
No 399
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.26 E-value=0.54 Score=46.78 Aligned_cols=31 Identities=39% Similarity=0.637 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-----G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-----QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-----TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-----CCEEEEEECCH
Confidence 69999999999999999998 68999999875
No 400
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.24 E-value=0.53 Score=44.07 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|.|||+|-.|.++|..|++. |++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR----GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 699999999999999999996 89999998765
No 401
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.22 E-value=0.56 Score=45.95 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=29.5
Q ss_pred CCCCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 50 TNNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 50 ~~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.++.++++|+|+|+|-.|-.+|..|++ ..+|+|.++..
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~-----~~~v~~~~~~~ 48 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKD-----EFDVYIGDVNN 48 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTT-----TSEEEEEESCH
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhc-----CCCeEEEEcCH
Confidence 445567899999999999999999988 57999988765
No 402
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.19 E-value=0.35 Score=47.15 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCC-------cEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKH-------LSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G-------~~V~v~E~~~~ 93 (515)
.++|.|||+|--|.+.|..|++. | ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~----g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN----AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----HHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCcccCCCCeEEEEEcChh
Confidence 35899999999999999999996 8 89999998875
No 403
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=87.18 E-value=0.48 Score=48.31 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a----G~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH----GHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCeEEEEECCHH
Confidence 4799999999999999999996 999999998864
No 404
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.14 E-value=0.74 Score=43.69 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=29.9
Q ss_pred ccEEEEC-CCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVG-GGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVG-gG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|.||| .|-.|.++|..|++. |++|.++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~----G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS----GYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT----TCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC----CCeEEEEECCc
Confidence 4699999 999999999999996 89999998765
No 405
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.01 E-value=0.6 Score=43.65 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=30.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~----G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL----DCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc----CCEEEEEECCH
Confidence 35799999999999999999996 88999998765
No 406
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=86.93 E-value=0.58 Score=45.37 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|.|||.|.-|.++|..|++. |++|.++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~----G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA----NHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT----TCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 35799999999999999999996 89999999876
No 407
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.92 E-value=0.46 Score=45.22 Aligned_cols=34 Identities=24% Similarity=0.542 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~ 93 (515)
.+|+|||+|-.|..+|+.|+.. |+ +|.++|....
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~----g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK----GIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEcCCcc
Confidence 5799999999999999999885 77 9999998763
No 408
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.91 E-value=0.43 Score=45.68 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
..+|.|||.|.-|..+|..|++. |+ +|+++++.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~----G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA----GAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH----SCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHC----CCCeEEEEcCCC
Confidence 46899999999999999999996 89 999999863
No 409
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.91 E-value=0.48 Score=45.34 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~~ 93 (515)
++|+|||+|..|.++|+.|++. |+ ++.++|..+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~----~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ----DVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCchH
Confidence 3699999999999999999986 55 8999998763
No 410
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.83 E-value=0.56 Score=42.54 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=31.3
Q ss_pred CCccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+...|+|.|| |-.|..++..|++. |++|+++.|.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~----G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK----GHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT----TCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC----CCeEEEEECChH
Confidence 3467999998 99999999999995 999999998763
No 411
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.83 E-value=0.31 Score=45.98 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+|.|||.|-.|..+|..|++. |++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~----G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA----GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC----CCeEEEEcCCHH
Confidence 699999999999999999996 899999998874
No 412
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.75 E-value=0.7 Score=43.84 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
...|+|||+|.+|.++|..|++. |. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~----G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST----AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT----TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC----CCCEEEEEeCCH
Confidence 45799999999999999999996 87 999998875
No 413
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.74 E-value=0.43 Score=48.53 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++|.|||.|-.|+.+|..|++.+ .|++|+++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g--~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC--PEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC--TTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcC--CCCEEEEEECCHH
Confidence 58999999999999999999852 2799999998753
No 414
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.71 E-value=0.5 Score=44.89 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|.|||.|-.|...|..|++. |++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~----G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA----GYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhC----CCeEEEEcCCH
Confidence 4799999999999999999996 89999999875
No 415
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.68 E-value=0.54 Score=47.67 Aligned_cols=34 Identities=24% Similarity=0.195 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|||||.+|...+..|.+. |.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~----ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA----GARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----cCEEEEEcCCC
Confidence 35799999999999999999996 99999999754
No 416
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.54 E-value=0.62 Score=45.52 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.|+|+|||..|..+|+.+++. |++|+++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~----G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA----GMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCCCC
Confidence 599999999999999999997 9999999987754
No 417
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.51 E-value=0.53 Score=45.19 Aligned_cols=35 Identities=29% Similarity=0.478 Sum_probs=29.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
+..+|+|||+|-.|.++|+.|+.. ++ .+.++|.+.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~----~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQ----GIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC----CCCCEEEEEeCCc
Confidence 457899999999999999999985 44 799999754
No 418
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.48 E-value=0.58 Score=47.65 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..+|.|||.|.-|..+|..|++. |++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~----G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH----GFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 36899999999999999999996 999999998874
No 419
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.38 E-value=0.6 Score=47.64 Aligned_cols=36 Identities=25% Similarity=0.406 Sum_probs=31.7
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+.+|.|||.|.-|..+|..|++. |++|++++|.+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~----G~~V~v~~r~~~ 49 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR----GYTVSIFNRSRE 49 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT----TCCEEEECSSHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC----CCeEEEEeCCHH
Confidence 456899999999999999999996 999999998753
No 420
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.26 E-value=0.52 Score=48.14 Aligned_cols=36 Identities=33% Similarity=0.502 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++|.|||.|-.|+.+|..|++.+ .|++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g--~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKC--PHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC--TTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcC--CCCEEEEEECCHH
Confidence 58999999999999999999852 2689999998753
No 421
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=86.18 E-value=0.52 Score=43.66 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCC-cEEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G-~~V~v~E~~~ 92 (515)
+|.|||+|-.|.+.|..|++. | ++|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~----g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ----GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC----CCCeEEEECCCH
Confidence 699999999999999999986 8 8999998875
No 422
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.05 E-value=0.51 Score=47.75 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=31.1
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|+|+|+|..|.++|..|+.. |.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~----GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQA----GARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCH
Confidence 345799999999999999999997 89999998865
No 423
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=85.97 E-value=11 Score=40.01 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=29.4
Q ss_pred CcEEEEcccccccCCccccchhhcHHHHHHHHHHHHHhHh
Q 010200 394 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 433 (515)
Q Consensus 394 ~~v~lvGDAAh~~~P~~G~G~n~al~da~~La~~l~~~~~ 433 (515)
+++.+.|++.+...+ .-+.-|++++...|+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 799999999886544 3477788999988888877654
No 424
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=85.97 E-value=0.99 Score=44.40 Aligned_cols=36 Identities=25% Similarity=0.450 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
....|+|||+|..|..++..+++. |++|.+++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~l----G~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKM----GYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEECCCC
Confidence 345799999999999999999997 999999998764
No 425
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.94 E-value=0.66 Score=43.36 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|+|.|+|..|..++..|.+. |++|+++.|.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~----g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ----GWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG----TCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHC----CCEEEEEEcChh
Confidence 5799999999999999999995 999999988763
No 426
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=85.89 E-value=0.63 Score=44.76 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=30.0
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
...+|+|||+|..|.++|+.|+.. |+ ++.++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~----~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ----GIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCCeEEEEeCCh
Confidence 346899999999999999999986 55 899999854
No 427
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.81 E-value=0.66 Score=44.45 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=29.5
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|+|||+|..|.++|+.|+..+. ..+|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~--~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGI--ADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC--CSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--CCEEEEEeCCc
Confidence 4689999999999999999988521 23899999865
No 428
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=85.78 E-value=0.54 Score=44.90 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCC--cEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G--~~V~v~E~~~ 92 (515)
.+|+|||+|-.|.++|..|++. | .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~----g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ----GVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEcCCH
Confidence 3699999999999999999986 6 6999999875
No 429
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.78 E-value=0.56 Score=46.64 Aligned_cols=35 Identities=29% Similarity=0.380 Sum_probs=31.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|+|||.|..|..+|..|+.. |.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~----Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAM----GSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHC----CCEEEEEeCCh
Confidence 345799999999999999999986 89999999876
No 430
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.77 E-value=0.91 Score=44.82 Aligned_cols=36 Identities=22% Similarity=0.494 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
....|+|||+|..|..+|..+++. |++|.+++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~----G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEM----GYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc----CCEEEEEeCCCC
Confidence 345799999999999999999997 999999997654
No 431
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.71 E-value=0.84 Score=42.92 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=30.1
Q ss_pred ccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|.|||+ |-.|..+|..|++. |++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~----g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS----AHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS----SSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 47999999 99999999999996 89999998765
No 432
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=85.65 E-value=0.8 Score=44.03 Aligned_cols=34 Identities=38% Similarity=0.425 Sum_probs=29.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
..+|.|||+|..|.++|+.|+.. |+ ++.++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~----g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK----DLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH----CCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCCeEEEEECCH
Confidence 46899999999999999999985 66 899999855
No 433
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.51 E-value=0.67 Score=47.46 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=32.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+.+|.|||.|.-|..+|..|++. |++|++++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~----G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH----GFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 346899999999999999999996 999999998763
No 434
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=85.45 E-value=0.57 Score=44.25 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+|.|||+|-.|...|..|++. |++|.++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~----g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH----GYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT----TCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 699999999999999999996 899999998763
No 435
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.39 E-value=0.93 Score=43.65 Aligned_cols=35 Identities=40% Similarity=0.509 Sum_probs=30.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
...+|+|||+|-.|.++|+.|+.. |+ ++.++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~----~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMK----DLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCceEEEEeCCh
Confidence 457899999999999999999885 65 899999764
No 436
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.34 E-value=0.75 Score=43.10 Aligned_cols=32 Identities=34% Similarity=0.464 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCc--EEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~--~V~v~E~~~ 92 (515)
+|.|||+|..|.++|..|++. |+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS----GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT----TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc----CCCcEEEEEeCCH
Confidence 699999999999999999996 77 899998765
No 437
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.32 E-value=0.71 Score=43.38 Aligned_cols=34 Identities=12% Similarity=0.348 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc---EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL---SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~---~V~v~E~~~ 92 (515)
..+|.|||+|--|.+.|..|.+. |+ +|.++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~----g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN----GYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT----TCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC----CCCCCeEEEEeCCH
Confidence 36799999999999999999996 77 899999876
No 438
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.23 E-value=0.59 Score=47.65 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~----Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQ----GARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 345799999999999999999986 89999999876
No 439
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.23 E-value=0.89 Score=44.79 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=33.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
....++|+|||..|.++|..++.. |++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~l----g~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFL----GYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHT----TCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCEEEEECCchhh
Confidence 346899999999999999999997 9999999988764
No 440
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.06 E-value=0.83 Score=43.38 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=31.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~----G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL----GANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 446799999999999999999986 89999999875
No 441
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=85.00 E-value=0.94 Score=41.79 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|.|||.|-.|...|..|++. |++|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~----g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQT----PHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS----SCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhC----CCeEEEECCCH
Confidence 5799999999999999999986 88999998875
No 442
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.95 E-value=0.85 Score=43.15 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|.|||.|..|..+|..|+.. |.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~----G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL----GAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 346799999999999999999986 89999999875
No 443
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=84.83 E-value=0.73 Score=47.06 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
++|.|||.|.-|..+|..|++. |++|.++++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~----G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH----GFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHC----CCeEEEEeCCHH
Confidence 5799999999999999999996 899999998763
No 444
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.65 E-value=0.91 Score=40.38 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|+|.|| |..|..++..|.+. |++|.++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~----g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR----GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC----CCEEEEEEcCc
Confidence 5999996 99999999999995 99999999875
No 445
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.53 E-value=0.51 Score=46.45 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCC-------cEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKH-------LSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G-------~~V~v~E~~~~ 93 (515)
.+|.|||+|--|.++|..|++. | ++|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~----G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN----AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH----HHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHc----CCccCCCCCeEEEEECChh
Confidence 4799999999999999999986 8 89999998764
No 446
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.44 E-value=0.91 Score=42.45 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..|+|.|+|..|..++..|.+. |++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~----g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ----GHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCcc
Confidence 4799999999999999999996 899999998764
No 447
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.44 E-value=0.79 Score=42.29 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
..+|+|||+|-.|..+|..|++. |. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~----Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA----GVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT----TCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc----CCCeEEEEeCCCc
Confidence 46899999999999999999997 55 7999998763
No 448
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=84.28 E-value=0.71 Score=43.29 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
...|+|+|+|-+|.++|..|++. |. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~----G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI----VRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT----CCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC----CCCEEEEEeCCHH
Confidence 35799999999999999999996 87 8999998764
No 449
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=84.25 E-value=0.77 Score=46.80 Aligned_cols=33 Identities=36% Similarity=0.532 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|.|||+|--|..+|..|++. |++|++++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~----G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK----GFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 4799999999999999999996 89999999865
No 450
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.23 E-value=1.4 Score=42.78 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=29.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.-.|+|+|+|+.|++++..++.. |.+|+++++.+.
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~----Ga~Vi~~~~~~~ 211 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM----GAEVSVFARNEH 211 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT----TCEEEEECSSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC----CCeEEEEeCCHH
Confidence 35799999999999988888775 899999987763
No 451
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.21 E-value=0.69 Score=43.25 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~----G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA----QQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT----TCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 45799999999999999999996 89999998875
No 452
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=83.73 E-value=1.1 Score=48.24 Aligned_cols=34 Identities=29% Similarity=0.543 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a----G~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS----NYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT----TCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhC----CCEEEEEECCHH
Confidence 4699999999999999999996 999999998863
No 453
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=83.57 E-value=0.68 Score=43.92 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=27.4
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
.+|.+||-|.-|...|..|.+. |++|++|++.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~----G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA----GYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHC----CCeEEEEeCCHHH
Confidence 4699999999999999999996 9999999987754
No 454
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.52 E-value=0.97 Score=41.44 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc----EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL----SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~----~V~v~E~~~ 92 (515)
.+|.|||+|--|.+.|..|.+. |+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~----g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK----NIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhC----CCCCCCeEEEEeCCH
Confidence 4799999999999999999996 77 999999876
No 455
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=83.46 E-value=1.4 Score=44.07 Aligned_cols=36 Identities=33% Similarity=0.541 Sum_probs=31.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
....|+|+|||..|..++..+++. |++|.+++..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~l----G~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSM----GYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEECCCCc
Confidence 345799999999999999999997 999999987654
No 456
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=83.44 E-value=0.97 Score=43.25 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=29.0
Q ss_pred ccEEEECC-CHHHHHHHHHHhcCCCCCC--cEEEEEcCCC
Q 010200 56 YDVAVVGG-GMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~G--~~V~v~E~~~ 92 (515)
++|+|||| |-.|.++|..|+.. | ..+.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~----~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS----PLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC----TTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhC----CCCcEEEEEeCCc
Confidence 36999998 99999999999985 5 6899999875
No 457
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.42 E-value=1.1 Score=43.22 Aligned_cols=35 Identities=17% Similarity=0.412 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
..+|+|||+|-.|..+|..|++. |. +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a----GVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW----GVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc----CCCEEEEecCCEe
Confidence 46899999999999999999998 54 7999998764
No 458
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=83.40 E-value=0.77 Score=43.32 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=31.3
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
...+|+|||+|-.|..+|..|+++|+ -+++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV---G~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI---GKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC---SEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC---CEEEEECCCcc
Confidence 34689999999999999999999842 37999998764
No 459
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.38 E-value=1 Score=43.56 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=28.9
Q ss_pred CccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|+|||+ |-.|.++|+.|+..+. ..+|.++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~--~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRL--TPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTC--CSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCC--CCEEEEEeCCc
Confidence 468999998 9999999999988621 13799999754
No 460
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.30 E-value=0.81 Score=42.85 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|+|||+|-+|.++|..|.+. |.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~----g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE----GAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHc----CCEEEEEECCH
Confidence 35799999999999999999996 78999999875
No 461
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.29 E-value=0.86 Score=47.55 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..|+|||+|..|..+|..|.+. |++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~----g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK----PVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC----CCCEEEEECChHH
Confidence 6799999999999999999996 9999999999865
No 462
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.25 E-value=1.3 Score=41.76 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=29.2
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
...|+|+|+|-+|.++|..|++. | +|+|+.|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~----G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKD----N-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSS----S-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHC----C-CEEEEECCH
Confidence 35799999999999999999996 9 999998764
No 463
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.22 E-value=1 Score=45.61 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=30.3
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.-+|+|+|||-.|..+|..|.+ +++|.|+|++..
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-----~~~v~iIE~d~~ 268 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-----TYSVKLIERNLQ 268 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-----TSEEEEEESCHH
T ss_pred ccEEEEEcchHHHHHHHHHhhh-----cCceEEEecCHH
Confidence 3579999999999999999977 689999999864
No 464
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=83.17 E-value=0.98 Score=44.90 Aligned_cols=36 Identities=28% Similarity=0.454 Sum_probs=31.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
|+....|+|+|||..|..++..+++. |++|.+++ .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~l----G~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRL----NIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH----TCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEE-CC
Confidence 44457899999999999999999997 99999999 54
No 465
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.15 E-value=1.2 Score=38.98 Aligned_cols=34 Identities=15% Similarity=0.351 Sum_probs=30.7
Q ss_pred ccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
..|+|.|| |..|..++..|.+. |++|.++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~----g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA----GYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT----TCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC----CCeEEEEEeChh
Confidence 57999999 99999999999996 899999998764
No 466
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.07 E-value=1 Score=43.30 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=29.6
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++.+|+|||+|-.|.++|+.|+..+. .-.+.++|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~--~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGI--AQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC--CSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCC--CCEEEEEeCCc
Confidence 34789999999999999999988521 22799998754
No 467
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.05 E-value=1.1 Score=39.94 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|+|.|| |..|..++..|.+. |++|.++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~----g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR----GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC----CCEEEEEEecc
Confidence 5999998 99999999999995 99999998875
No 468
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.03 E-value=1 Score=45.88 Aligned_cols=34 Identities=32% Similarity=0.410 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..+|.|||.|.-|..+|..|++. |++|.++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~----G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR----GYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC----CCEEEEEcCCH
Confidence 46899999999999999999996 89999999875
No 469
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.93 E-value=1.1 Score=40.02 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=31.0
Q ss_pred ccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
..|+|.|| |..|..++..|.+. |++|.++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~----g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR----GFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT----TCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHC----CCEEEEEEcCccc
Confidence 57999996 99999999999996 8999999998643
No 470
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=82.90 E-value=1 Score=43.53 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
..|.|||.|-.|.+.|..|++. |++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~----G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS----GVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT----TCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHC----cCEEEEEECCh
Confidence 4699999999999999999996 89999999875
No 471
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=82.87 E-value=1.1 Score=42.66 Aligned_cols=34 Identities=29% Similarity=0.288 Sum_probs=29.9
Q ss_pred CCccEEEECCC-HHHHHHHHHHhcCCCCCCcEEEEEcCC
Q 010200 54 DQYDVAVVGGG-MVGMALACSLASMPLTKHLSVAIIDSN 91 (515)
Q Consensus 54 ~~~dVvIVGgG-~aGl~~A~~L~~~~~~~G~~V~v~E~~ 91 (515)
...+|+|||+| ++|..+|..|.+. |..|+|++|.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~----gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAND----GATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT----SCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHC----CCEEEEEeCc
Confidence 45689999999 6899999999996 8999999876
No 472
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.64 E-value=0.75 Score=42.69 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcE-EEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLS-VAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~-V~v~E~~~ 92 (515)
++|.|||+|-.|...|..|++. |++ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~----g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK----GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC----CCeEEEEEeCCH
Confidence 5799999999999999999986 888 89998765
No 473
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=82.64 E-value=1 Score=41.54 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~~ 93 (515)
.|+|||+|-+|-+++..|.+. |. +|+|+.|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~----G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM----GVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHc----CCCEEEEEeCCHH
Confidence 899999999999999999996 77 8999998753
No 474
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=82.62 E-value=1 Score=43.37 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=29.2
Q ss_pred CCccEEEECC-CHHHHHHHHHHhcCCCCCCc-------EEEEEcCC
Q 010200 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHL-------SVAIIDSN 91 (515)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~G~-------~V~v~E~~ 91 (515)
++++|+|+|| |-.|.+++..|... |+ .|.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~----~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG----DMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT----TTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC----CCcCCCCCCEEEEEcCC
Confidence 3578999998 99999999999885 54 79999876
No 475
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=82.53 E-value=0.73 Score=44.81 Aligned_cols=36 Identities=14% Similarity=0.165 Sum_probs=32.9
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
...++|+|||..+.++|..++.. |++|+|+|.++..
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~l----gf~V~v~D~R~~~ 234 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNV----GFYTVVTDWRPNQ 234 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHH----TEEEEEEESCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCeEEEECCCccc
Confidence 56899999999999999999997 9999999988754
No 476
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=82.53 E-value=0.97 Score=44.39 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=31.8
Q ss_pred CCccEEEECC-CHHHHHHHHHHhcCCCCCCc---EEEEEcCCC
Q 010200 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHL---SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~G~---~V~v~E~~~ 92 (515)
...+|+|||| |.+|+.++..+... |. +|+++|.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~l----Ga~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKV----GIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHT----TCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhC----CCCcCceEEeeccc
Confidence 4678999999 99999999999998 87 999999876
No 477
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=82.45 E-value=1.3 Score=41.62 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=30.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
....|+|+|+|-+|.+++..|++. |. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~----G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTH----GVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT----TCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC----CCCEEEEEECCH
Confidence 345799999999999999999996 87 799998875
No 478
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=82.37 E-value=1.6 Score=41.71 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=31.2
Q ss_pred CCccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
....|+|.|| |..|..++..|++. |++|+++.|...
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~----g~~V~~~~r~~~ 55 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQ----GHEILVIDNFAT 55 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGG----TCEEEEEECCSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC----CCEEEEEECCCc
Confidence 3467999998 99999999999996 899999998653
No 479
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.25 E-value=1.5 Score=41.15 Aligned_cols=35 Identities=11% Similarity=0.194 Sum_probs=30.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~----G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQ----QPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT----CCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhc----CCCeEEEEECCH
Confidence 346799999999999999999996 85 999998865
No 480
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.17 E-value=0.96 Score=41.84 Aligned_cols=30 Identities=30% Similarity=0.273 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~ 90 (515)
+|.|||+|-.|..+|..|++. |++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~----g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR----GVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT----TCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC----CCeEEEeCC
Confidence 699999999999999999996 899999866
No 481
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=81.93 E-value=1.1 Score=42.95 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=29.1
Q ss_pred CccEEEECC-CHHHHHHHHHHhcCCCCCCc-------EEEEEcCCC
Q 010200 55 QYDVAVVGG-GMVGMALACSLASMPLTKHL-------SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGg-G~aGl~~A~~L~~~~~~~G~-------~V~v~E~~~ 92 (515)
+++|+|+|| |..|..++..|.+. |+ +|.++|+..
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~----g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG----EMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT----TTTCTTCCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC----CCCCCCCCCEEEEEeCCC
Confidence 468999998 99999999999985 64 899998754
No 482
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=81.79 E-value=1.4 Score=42.17 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=30.7
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~----Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALD----GVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----TCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHC----CCCEEEEEECCC
Confidence 345799999999999999999996 87 899999874
No 483
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=81.79 E-value=1.4 Score=41.46 Aligned_cols=35 Identities=31% Similarity=0.492 Sum_probs=30.9
Q ss_pred ccEEEECC-CHHHHHHHHHHhcCCCCCCcEEEEEcCCCCC
Q 010200 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (515)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~G~~V~v~E~~~~~ 94 (515)
++|+|.|| |..|..++..|.+. |++|+++-|++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~----G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR----GHEVTLVSRKPGP 36 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT----TCEEEEEESSCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC----CCEEEEEECCCCc
Confidence 46999999 99999999999985 9999999887643
No 484
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=81.69 E-value=1 Score=45.06 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+.-|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~----G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH----GVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHC----CCEEEEEECCHH
Confidence 5688999999999999999996 999999999874
No 485
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=81.64 E-value=1.1 Score=43.24 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=29.4
Q ss_pred CccEEEEC-CCHHHHHHHHHHhcCCCCCC--cEEEEEcCCC
Q 010200 55 QYDVAVVG-GGMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVG-gG~aGl~~A~~L~~~~~~~G--~~V~v~E~~~ 92 (515)
.++|+||| +|..|.+++..|+.. | .+|.++|...
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~----g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN----PLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC----TTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhC----CCCCEEEEEeCCC
Confidence 46899999 799999999999885 6 7899999765
No 486
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=81.49 E-value=1.1 Score=44.71 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|+|||.|..|..+|..|+.. |.+|+++|+++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~----Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGF----GARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHC----CCEEEEECCCh
Confidence 346799999999999999999997 89999999875
No 487
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=81.37 E-value=1.1 Score=45.80 Aligned_cols=50 Identities=6% Similarity=0.036 Sum_probs=39.3
Q ss_pred HHHhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccccCCeeEEEcCCCcEEEeeEEEEecCCCch
Q 010200 179 SCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 249 (515)
Q Consensus 179 ~~~~~~g~v~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~vV~AdG~~S~ 249 (515)
+.+++.| ++|+++++|++++. ++....+.+.+|+++.+|.||.|.|.++.
T Consensus 265 ~~l~~~G-V~v~~~~~v~~i~~--------------------~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWG-IDYVHIPNVKRVEG--------------------NEKVERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHT-CEEEECSSEEEEEC--------------------SSSCCEEEETTCCEEECSEEEECCCEEEC
T ss_pred HHHHhCC-cEEEeCCeeEEEec--------------------CCceEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 5566667 99999999999964 22334566788889999999999998754
No 488
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.24 E-value=1.8 Score=42.44 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=28.2
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
-.|+|+|+|+.|++++..++.. |. +|+++++.+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~----Ga~~Vi~~~~~~ 230 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA----GASRIIAIDING 230 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCSEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHc----CCCeEEEEcCCH
Confidence 4799999999999998888775 88 799998765
No 489
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=81.21 E-value=1.9 Score=42.32 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
+...|+|+|+|..|...+..+++. |++|.+++..+.
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~----G~~v~~~~~~~~ 45 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRL----GVEVIAVDRYAD 45 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT----TCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc----CCEEEEEECCCC
Confidence 446899999999999999999996 999999987653
No 490
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=81.15 E-value=1.1 Score=44.68 Aligned_cols=35 Identities=31% Similarity=0.316 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|+|||.|..|..+|..|+.. |.+|+++|+++
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lraf----Ga~Viv~d~dp 280 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGA----GARVKVTEVDP 280 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSH
T ss_pred cCCEEEEECcCHHHHHHHHHHHHC----CCEEEEEeCCc
Confidence 345799999999999999999986 99999999866
No 491
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=81.14 E-value=1.6 Score=40.74 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=30.4
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~----G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQA----GPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----CCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHc----CCCEEEEEeCCH
Confidence 345799999999999999999996 85 899998865
No 492
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=80.98 E-value=1.1 Score=42.81 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
+|+|||+|-.|.++|+.|+.. |+ .+.++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~----~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR----GYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH----TCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhC----CCCEEEEEcCCh
Confidence 489999999999999999885 66 599999875
No 493
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.97 E-value=1.3 Score=41.12 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
+|+|||+|-.|.+.|..|.+. |.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~----g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA----GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 899999999999999999986 78999998875
No 494
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=80.84 E-value=0.84 Score=42.99 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
++|.|||+|-.|...|..|++. |++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA----GHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT----TCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhC----CCEEEEEc-CH
Confidence 4799999999999999999986 89999998 54
No 495
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.81 E-value=1 Score=44.70 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=30.0
Q ss_pred CccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
...|+|||+|..|..+|..|+.. |. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~----G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR----GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH----CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC----CCCEEEEEeCCH
Confidence 45799999999999999999986 87 899998765
No 496
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=80.80 E-value=1.4 Score=41.41 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=30.8
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
....|+|+|+|-+|-+++..|++. |. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~----G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDN----FAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHT----TCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHc----CCCEEEEEeCCH
Confidence 346899999999999999999996 87 899998875
No 497
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.78 E-value=1.3 Score=41.63 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
.+|.|||+|-.|.++|..|++.+ .|++|.++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g--~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDH--PHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCC--CCcEEEEEcCCH
Confidence 57999999999999999998852 167999998765
No 498
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=80.64 E-value=1.2 Score=47.74 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~~ 93 (515)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~a----G~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASK----GTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHT----TCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhC----CCEEEEEECCHH
Confidence 4699999999999999999996 999999998863
No 499
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=80.40 E-value=1.8 Score=41.81 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHhcCCCCCCcEEEEEcCCC
Q 010200 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (515)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~G~~V~v~E~~~ 92 (515)
....|.|||.|-.|..+|..|+.. |++|.++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~----G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGF----NMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC----CCEEEEECCCc
Confidence 345799999999999999999986 89999999865
No 500
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.88 E-value=1.7 Score=42.55 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHhcCCCCCCc-EEEEEcCCC
Q 010200 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (515)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~G~-~V~v~E~~~ 92 (515)
-.|+|+|+|+.|++++..++.. |. +|+++++.+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~----Ga~~Vi~~~~~~ 226 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA----GASRIIGVGTHK 226 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCSEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHc----CCCeEEEECCCH
Confidence 4799999999999998887775 87 799998765
Done!